Miyakogusa Predicted Gene
- Lj3g3v2706660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2706660.1 tr|Q5JQR9|Q5JQR9_ORYSJ OSJNba0093F12.23 protein
OS=Oryza sativa subsp. japonica GN=OSJNba0093F12.23
,58.97,5e-17,PWWP,PWWP; seg,NULL;
Tudor/PWWP/MBT,NULL,NODE_50711_length_2641_cov_32.661114.path2.1
(740 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G21295.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 293 4e-79
AT1G51745.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 262 7e-70
AT1G51745.2 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 189 5e-48
AT3G03140.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 171 1e-42
>AT3G21295.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:7489635-7492296 FORWARD LENGTH=645
Length = 645
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 212/502 (42%), Positives = 272/502 (54%), Gaps = 58/502 (11%)
Query: 1 MGSSGE---NGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGRE 57
MGSS E IDAS GGLVWVRRRNG+WWPGRIM HE+ + ++VSP+SGTP+KLLGR+
Sbjct: 1 MGSSDERNCKAIDASVGGLVWVRRRNGAWWPGRIMAHHEVPDGTIVSPKSGTPIKLLGRD 60
Query: 58 DASVDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESA 117
DASVDWYNLE+SKRVK FRCGEYD CI YARREDAI HALE+E+A
Sbjct: 61 DASVDWYNLEKSKRVKAFRCGEYDACIATAKATASTTGKKAVKYARREDAIAHALEIENA 120
Query: 118 RLGKESLNFCSRSDTLGGEPVGLAGESPIISCSGXXXXXXXXXXXXXXXXXXXXXXXHQS 177
L K+ ++ T G V G I SG QS
Sbjct: 121 HLAKDHPPCIEKASTSG--EVSRKG----IEDSGDVAETEVAL---------------QS 159
Query: 178 EISLEEPNQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLGAG 237
+SL++ +SK+Q L +RRRTPNDSEDDGT+ KRMRGLED+G+G K KV
Sbjct: 160 TMSLKKTKNGKASKVQPLSEKRRRTPNDSEDDGTQTNKRMRGLEDIGMGTGSKGKVQVGA 219
Query: 238 TPEIAQQDGALSGNSNTGNFLVNGTFVNGGKGHFS-TLKRRRTQVANVHESLKRKNRRRP 296
E Q++G S +N + + NG+ NG S ++KR+R+ V ++ KRKNRRR
Sbjct: 220 LLEDTQENGFKSDTNNINDSVSNGSLSNGSSRDCSPSMKRKRSPVVIANDYSKRKNRRRT 279
Query: 297 LTKVLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNELQERSPLANHVFVSTE 356
LTKVLESTA VS+P CD L +S GV+ S N S SNE+
Sbjct: 280 LTKVLESTATVSIPGTCDKLVNSDCLSLPGVSESDNNSD--SNEV--------------- 322
Query: 357 AAFENGTSADIQEDGRETSQTNYTVKENEASGISGQIWNDFSDKLFDVPFMKVGREERPL 416
F S +I E N KE+E S IS +D S+ LFDVP G E+ P
Sbjct: 323 --FSENVSENIVE------VINDKGKESEVSNISVLAKDDSSNGLFDVPLN--GDEKYP- 371
Query: 417 TGFSPVLASCSSGKPGVDVLGQQSRHLGQSEALS-ARNEGYSTGFTSSIADHNITDLRAE 475
+G S V + SS P ++ +R GQS ++EG + ++S A ++
Sbjct: 372 SGISTVPFTSSS--PRKALVSGPTRRFGQSSHDDVVKSEGSNGSPSTSPAATLFNGIKK- 428
Query: 476 IGSSEWLSKGKRNSRHARKEAL 497
+S+W KGKRNSR K+ +
Sbjct: 429 -STSKWQLKGKRNSRQMSKKQV 449
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
Query: 535 APVAS-YNGTSQARCKQVAEGELGGFRDLSKRIKGTRDVKLLPDRSLTPQVSLPYRQPRL 593
+P A+ +NG ++ K +G+ + K+++ + + P S+ ++PR
Sbjct: 417 SPAATLFNGIKKSTSKWQLKGKRNSRQMSKKQVERRNAYAEEANNNALPHWSVSDQKPRS 476
Query: 594 PLAPNHPMLDCPGRNSCSDGSLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVE 653
+ + GRNS LYDVKIE+K++Y+P++VPL+SL SKLN +A +GHP VE
Sbjct: 477 LFSVGTQAM---GRNS----ELYDVKIEVKANYKPRNVPLISLRSKLNGEAIVGHPSVVE 529
Query: 654 VMPDGQC 660
V+ DG C
Sbjct: 530 VLEDGSC 536
>AT1G51745.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr1:19192055-19194375 FORWARD LENGTH=563
Length = 563
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 213/550 (38%), Positives = 275/550 (50%), Gaps = 73/550 (13%)
Query: 8 GIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDASVDWYNLE 67
I+AS G LVWVRRRNGSWWPG+ + ++ ++SLV P+ GTP+KLLGR+D SVDWY LE
Sbjct: 11 AINASVGRLVWVRRRNGSWWPGQTLVHDQVPDNSLVGPKVGTPIKLLGRDDVSVDWYILE 70
Query: 68 RSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLGKESLNFC 127
SK VK FRCGEYD CIE REDAI +AL++E+ L KE N C
Sbjct: 71 NSKTVKAFRCGEYDTCIEKAKASSSKKRSGKCTL--REDAINNALKIENEHLAKEDDNLC 128
Query: 128 SRSDTLGGEPVGLAGESPIISC-SGXXXXXXXXXXXXXXXXXXXXXXXH--QSEISLEEP 184
+ L+GE C SG QS IS +E
Sbjct: 129 N-----------LSGEEDSKRCLSGKEDEDSGSSDAEETEDDELASAPEQLQSSISSQEM 177
Query: 185 NQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLGAGTPEIAQQ 244
N G+SK+QS +RRRTPNDSEDDGTEGVKRMRGLED+G K G E Q
Sbjct: 178 NNVGASKVQS---KRRRTPNDSEDDGTEGVKRMRGLEDIG-------KEQAGGIVEHKQD 227
Query: 245 -----DGALSGNSNTGNFLVNGTFVNGGKGHFSTLKRRRTQVANVHESLKRKNRRRPLTK 299
LS + + GN + NG V S+LKR NV E KRKNRRR LTK
Sbjct: 228 LDLICAVGLSDSVSNGNTIANGNKV----CSPSSLKR------NVSECSKRKNRRRQLTK 277
Query: 300 VLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNE-LQERSPLANH----VFVS 354
VLESTAMVSVP CD +S G+ Y S S + S E ++ S + N+ VS
Sbjct: 278 VLESTAMVSVPVTCD---QGVSLDCQGI-YDSKVSGMESVESMKSVSVVINNNSDSTGVS 333
Query: 355 TEAAFENGTSADIQEDGRETSQTNYTVKENEASGISGQIWNDFSDKLFDVPFMKVGREER 414
E A+EN A N K++E S IS +D SD+LFDVP EE
Sbjct: 334 CEDAYENVVGA----------SHNNKAKDSEISSISVSAEDDSSDRLFDVPLTG---EEN 380
Query: 415 PLTGFSPVLASCSSGKPGVDVLGQQSRHLGQ-SEALSARNEGYS-TGFTSSIADHNITDL 472
GF A+C P ++ +R G+ S + +NE + + TS A + +
Sbjct: 381 HSEGFP---AACRISSPRKALVTDLTRRCGRNSHNVFVKNEASNGSACTSPPASEPVNCI 437
Query: 473 RA--EIGSSEWLSKGKRNSRH-ARKEALRTHVDMYDKFSTHLAGVENSDGYSQGTGQKAD 529
+ E +S+W KGKRNSR ++K+ R +V Y + + + + +S Y KA
Sbjct: 438 LSGIEKNTSKWQLKGKRNSRQMSKKQEERRNV--YGEEANNNSSTPHSTLYEVKIEVKAS 495
Query: 530 WNITGAPVAS 539
+ P+ S
Sbjct: 496 YTKPRVPLVS 505
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 614 SLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMM 664
+LY+VKIE+K+SY VPLVS S+L+ +A +GHPL+VE++ + + M+
Sbjct: 484 TLYEVKIEVKASYTKPRVPLVSRMSELSGKAIVGHPLSVEILEEDYSNGMV 534
>AT1G51745.2 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr1:19192236-19194375 FORWARD LENGTH=504
Length = 504
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 181/499 (36%), Positives = 233/499 (46%), Gaps = 73/499 (14%)
Query: 59 ASVDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESAR 118
A DWY LE SK VK FRCGEYD CIE REDAI +AL++E+
Sbjct: 3 ACEDWYILENSKTVKAFRCGEYDTCIEKAKASSSKKRSGKCTL--REDAINNALKIENEH 60
Query: 119 LGKESLNFCSRSDTLGGEPVGLAGESPIISC-SGXXXXXXXXXXXXXXXXXXXXXXXH-- 175
L KE N C+ L+GE C SG
Sbjct: 61 LAKEDDNLCN-----------LSGEEDSKRCLSGKEDEDSGSSDAEETEDDELASAPEQL 109
Query: 176 QSEISLEEPNQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLG 235
QS IS +E N G+SK+QS +RRRTPNDSEDDGTEGVKRMRGLED+G K
Sbjct: 110 QSSISSQEMNNVGASKVQS---KRRRTPNDSEDDGTEGVKRMRGLEDIG-------KEQA 159
Query: 236 AGTPEIAQQ-----DGALSGNSNTGNFLVNGTFVNGGKGHFSTLKRRRTQVANVHESLKR 290
G E Q LS + + GN + NG V S+LKR NV E KR
Sbjct: 160 GGIVEHKQDLDLICAVGLSDSVSNGNTIANGNKV----CSPSSLKR------NVSECSKR 209
Query: 291 KNRRRPLTKVLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNE-LQERSPLAN 349
KNRRR LTKVLESTAMVSVP CD +S G+ Y S S + S E ++ S + N
Sbjct: 210 KNRRRQLTKVLESTAMVSVPVTCD---QGVSLDCQGI-YDSKVSGMESVESMKSVSVVIN 265
Query: 350 H----VFVSTEAAFENGTSADIQEDGRETSQTNYTVKENEASGISGQIWNDFSDKLFDVP 405
+ VS E A+EN A N K++E S IS +D SD+LFDVP
Sbjct: 266 NNSDSTGVSCEDAYENVVGA----------SHNNKAKDSEISSISVSAEDDSSDRLFDVP 315
Query: 406 FMKVGREERPLTGFSPVLASCSSGKPGVDVLGQQSRHLGQ-SEALSARNEGYS-TGFTSS 463
EE GF A+C P ++ +R G+ S + +NE + + TS
Sbjct: 316 LTG---EENHSEGFP---AACRISSPRKALVTDLTRRCGRNSHNVFVKNEASNGSACTSP 369
Query: 464 IADHNITDLRA--EIGSSEWLSKGKRNSRH-ARKEALRTHVDMYDKFSTHLAGVENSDGY 520
A + + + E +S+W KGKRNSR ++K+ R +V Y + + + + +S Y
Sbjct: 370 PASEPVNCILSGIEKNTSKWQLKGKRNSRQMSKKQEERRNV--YGEEANNNSSTPHSTLY 427
Query: 521 SQGTGQKADWNITGAPVAS 539
KA + P+ S
Sbjct: 428 EVKIEVKASYTKPRVPLVS 446
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 614 SLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMM 664
+LY+VKIE+K+SY VPLVS S+L+ +A +GHPL+VE++ + + M+
Sbjct: 425 TLYEVKIEVKASYTKPRVPLVSRMSELSGKAIVGHPLSVEILEEDYSNGMV 475
>AT3G03140.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:724348-727093 FORWARD LENGTH=769
Length = 769
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 89/122 (72%)
Query: 1 MGSSGENGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDAS 60
M S G +D + G +VWVRRRNGSWWPGRI+G +L + + SPRSGTPVKLLGREDAS
Sbjct: 1 MASPGSGAVDWTVGSIVWVRRRNGSWWPGRILGQEDLDSTHITSPRSGTPVKLLGREDAS 60
Query: 61 VDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLG 120
VDWYNLE+SKRVKPFRCG++D+CIE YARREDAILHALELE L
Sbjct: 61 VDWYNLEKSKRVKPFRCGDFDECIERVESSQAMIIKKREKYARREDAILHALELEKEMLK 120
Query: 121 KE 122
+E
Sbjct: 121 RE 122
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 606 GRNSCSDGSLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMMR 665
GR + S SL DV +E++ SY+ VP+VSL SKLN +A IGHP+ VEV+ DG + ++
Sbjct: 524 GRKTYS--SLMDVDLEVRGSYQKGPVPIVSLMSKLNGRAIIGHPVEVEVLADGSSESYIQ 581