Miyakogusa Predicted Gene

Lj3g3v2706630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2706630.1 Non Chatacterized Hit- tr|F6HY37|F6HY37_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,91.67,3e-19,
,gene.g49476.t1.1
         (86 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G51720.1 | Symbols:  | Amino acid dehydrogenase family protei...    72   9e-14

>AT1G51720.1 | Symbols:  | Amino acid dehydrogenase family protein |
           chr1:19181741-19186297 FORWARD LENGTH=637
          Length = 637

 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 41/48 (85%)

Query: 39  ELELNHECSLMHWSPEDFESKLQEAMKQTHQRAIKAATDFGYQKESPE 86
           E+E+  E + M WS EDFES+LQEA+KQT+++A+KAA DFGYQKESPE
Sbjct: 566 EIEVLRESNSMQWSAEDFESRLQEALKQTYEKALKAANDFGYQKESPE 613