Miyakogusa Predicted Gene
- Lj3g3v2692920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2692920.1 Non Chatacterized Hit- tr|I1KGB8|I1KGB8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44550
PE,83.15,0,CHAPERONIN-60KDA, CH60,NULL; CHAPERONIN,Chaperonin
Cpn60/TCP-1; Cpn60_TCP1,Chaperonin Cpn60/TCP-1; G,CUFF.44407.1
(284 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G13860.1 | Symbols: HSP60-3A | heat shock protein 60-3A | chr... 441 e-124
AT3G23990.1 | Symbols: HSP60, HSP60-3B | heat shock protein 60 |... 392 e-109
AT2G33210.2 | Symbols: HSP60-2 | heat shock protein 60-2 | chr2:... 385 e-107
AT2G33210.1 | Symbols: HSP60-2 | heat shock protein 60-2 | chr2:... 385 e-107
AT1G55490.2 | Symbols: CPN60B, LEN1 | chaperonin 60 beta | chr1:... 209 1e-54
AT1G55490.1 | Symbols: CPN60B, LEN1 | chaperonin 60 beta | chr1:... 209 1e-54
AT5G56500.2 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 208 3e-54
AT5G56500.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 208 3e-54
AT3G13470.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 206 2e-53
AT1G26230.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 193 9e-50
AT2G28000.1 | Symbols: CPN60A, CH-CPN60A, SLP | chaperonin-60alp... 193 1e-49
AT1G26230.2 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 192 2e-49
AT5G18820.1 | Symbols: EMB3007 | TCP-1/cpn60 chaperonin family p... 164 4e-41
AT5G20890.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 56 4e-08
AT3G18190.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 53 2e-07
>AT3G13860.1 | Symbols: HSP60-3A | heat shock protein 60-3A |
chr3:4561704-4565133 REVERSE LENGTH=572
Length = 572
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/255 (85%), Positives = 236/255 (92%)
Query: 23 VLSRRNYVAKDISFGVGARAAILQGVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKDGV 82
++S RNY AKDISFG+GARAA+LQGVSEVAEAVKVTMGPKGRNVIIE S+ P++TKDGV
Sbjct: 25 IISSRNYAAKDISFGIGARAAMLQGVSEVAEAVKVTMGPKGRNVIIESSYGGPKITKDGV 84
Query: 83 TVAKSISFEDKAKNIGAGLVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVM 142
TVAKSISF+ KAKNIGA LVKQVA ATN AGDGTTCATVLTQAIL EGCKSVAAGVNVM
Sbjct: 85 TVAKSISFQAKAKNIGAELVKQVASATNKVAGDGTTCATVLTQAILIEGCKSVAAGVNVM 144
Query: 143 DLRNGINKAVAAVITDLKSRAVMISTPEEITQVGTISANGEREIGELIARAMEKVGKEGI 202
DLR GIN A+AAV++DLKSRAVMISTPEEITQV TISANGEREIGELIARAMEKVGKEG+
Sbjct: 145 DLRVGINMAIAAVVSDLKSRAVMISTPEEITQVATISANGEREIGELIARAMEKVGKEGV 204
Query: 203 ITVADGNTLENELEVVEGMKLARGYISPYFITDQKTQKCELENPFILIHDKKISDINSLL 262
ITVADGNTL+NELEVVEGMKLARGYISPYFITD+KTQKCELENP ILIH+KKISDINSLL
Sbjct: 205 ITVADGNTLDNELEVVEGMKLARGYISPYFITDEKTQKCELENPIILIHEKKISDINSLL 264
Query: 263 KILELAVTVDKPILI 277
K+LE AV +P+LI
Sbjct: 265 KVLEAAVKSSRPLLI 279
>AT3G23990.1 | Symbols: HSP60, HSP60-3B | heat shock protein 60 |
chr3:8669013-8672278 FORWARD LENGTH=577
Length = 577
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/281 (71%), Positives = 231/281 (82%), Gaps = 6/281 (2%)
Query: 1 MYRLAAKLASSTLKNNNPVYRGVLSR----RNYVAKDISFGVGARAAILQGVSEVAEAVK 56
MYR A+ LAS N R V SR RNY AK+I FGV ARA +L+GV ++A+AVK
Sbjct: 1 MYRFASNLASKARIAQNA--RQVSSRMSWSRNYAAKEIKFGVEARALMLKGVEDLADAVK 58
Query: 57 VTMGPKGRNVIIEKSHRNPRVTKDGVTVAKSISFEDKAKNIGAGLVKQVAKATNTAAGDG 116
VTMGPKGRNV+IE+S P+VTKDGVTVAKSI F+DK KN+GA LVKQVA ATN AGDG
Sbjct: 59 VTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDG 118
Query: 117 TTCATVLTQAILTEGCKSVAAGVNVMDLRNGINKAVAAVITDLKSRAVMISTPEEITQVG 176
TTCATVLT+AI EGCKSVAAG+N MDLR GI+ AV AV+T+LKS+A MIST EEI QVG
Sbjct: 119 TTCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKSKARMISTSEEIAQVG 178
Query: 177 TISANGEREIGELIARAMEKVGKEGIITVADGNTLENELEVVEGMKLARGYISPYFITDQ 236
TISANGEREIGELIA+AMEKVGKEG+IT+ DG TL NELEVVEGMKL RGY SPYFIT+Q
Sbjct: 179 TISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYTSPYFITNQ 238
Query: 237 KTQKCELENPFILIHDKKISDINSLLKILELAVTVDKPILI 277
KTQKCEL++P ILIH+KKIS INS++K+LELA+ +P+LI
Sbjct: 239 KTQKCELDDPLILIHEKKISSINSIVKVLELALKRQRPLLI 279
>AT2G33210.2 | Symbols: HSP60-2 | heat shock protein 60-2 |
chr2:14075093-14078568 REVERSE LENGTH=580
Length = 580
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/280 (69%), Positives = 230/280 (82%), Gaps = 3/280 (1%)
Query: 1 MYRLAAKLASSTL---KNNNPVYRGVLSRRNYVAKDISFGVGARAAILQGVSEVAEAVKV 57
MYRL + +AS K + + + S RNY AKDI FGV ARA +L+GV ++A+AVKV
Sbjct: 1 MYRLVSNVASKARIARKCTSQIGSRLNSTRNYAAKDIRFGVEARALMLRGVEDLADAVKV 60
Query: 58 TMGPKGRNVIIEKSHRNPRVTKDGVTVAKSISFEDKAKNIGAGLVKQVAKATNTAAGDGT 117
TMGPKGRNVIIE+S P+VTKDGVTVAKSI F+D+ KN+GA LVKQVA ATN AGDGT
Sbjct: 61 TMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGT 120
Query: 118 TCATVLTQAILTEGCKSVAAGVNVMDLRNGINKAVAAVITDLKSRAVMISTPEEITQVGT 177
TCATVLT+AI TEGCKSVAAG+N MDLR GI AV V+T+L+SRA MIST EEI QVGT
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGT 180
Query: 178 ISANGEREIGELIARAMEKVGKEGIITVADGNTLENELEVVEGMKLARGYISPYFITDQK 237
ISANG+REIGELIA+AME VGKEG+IT+ DG TL NELEVVEGMK+ RGYISPYFIT+ K
Sbjct: 181 ISANGDREIGELIAKAMETVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNPK 240
Query: 238 TQKCELENPFILIHDKKISDINSLLKILELAVTVDKPILI 277
TQKCELE+P ILIH+KKIS+IN+++K+LELA+ +P+LI
Sbjct: 241 TQKCELEDPLILIHEKKISNINAMVKVLELALKKQRPLLI 280
>AT2G33210.1 | Symbols: HSP60-2 | heat shock protein 60-2 |
chr2:14075093-14078568 REVERSE LENGTH=585
Length = 585
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/280 (69%), Positives = 230/280 (82%), Gaps = 3/280 (1%)
Query: 1 MYRLAAKLASSTL---KNNNPVYRGVLSRRNYVAKDISFGVGARAAILQGVSEVAEAVKV 57
MYRL + +AS K + + + S RNY AKDI FGV ARA +L+GV ++A+AVKV
Sbjct: 1 MYRLVSNVASKARIARKCTSQIGSRLNSTRNYAAKDIRFGVEARALMLRGVEDLADAVKV 60
Query: 58 TMGPKGRNVIIEKSHRNPRVTKDGVTVAKSISFEDKAKNIGAGLVKQVAKATNTAAGDGT 117
TMGPKGRNVIIE+S P+VTKDGVTVAKSI F+D+ KN+GA LVKQVA ATN AGDGT
Sbjct: 61 TMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGT 120
Query: 118 TCATVLTQAILTEGCKSVAAGVNVMDLRNGINKAVAAVITDLKSRAVMISTPEEITQVGT 177
TCATVLT+AI TEGCKSVAAG+N MDLR GI AV V+T+L+SRA MIST EEI QVGT
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGT 180
Query: 178 ISANGEREIGELIARAMEKVGKEGIITVADGNTLENELEVVEGMKLARGYISPYFITDQK 237
ISANG+REIGELIA+AME VGKEG+IT+ DG TL NELEVVEGMK+ RGYISPYFIT+ K
Sbjct: 181 ISANGDREIGELIAKAMETVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNPK 240
Query: 238 TQKCELENPFILIHDKKISDINSLLKILELAVTVDKPILI 277
TQKCELE+P ILIH+KKIS+IN+++K+LELA+ +P+LI
Sbjct: 241 TQKCELEDPLILIHEKKISNINAMVKVLELALKKQRPLLI 280
>AT1G55490.2 | Symbols: CPN60B, LEN1 | chaperonin 60 beta |
chr1:20715717-20718673 REVERSE LENGTH=600
Length = 600
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 152/231 (65%), Gaps = 1/231 (0%)
Query: 47 GVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKDGVTVAKSISFEDKAKNIGAGLVKQVA 106
GV+++A+ V VT+GPKGRNV++E + +PR+ DGVTVA+ + ED +NIGA LV+Q A
Sbjct: 74 GVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAA 133
Query: 107 KATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRNGINKAVAAVITDLKSRAVMI 166
TN AGDGTT + VL Q + EG K VAAG N + + GI K A++T+LK + +
Sbjct: 134 AKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEV 193
Query: 167 STPEEITQVGTISANGEREIGELIARAMEKVGKEGIITVADGNTLENELEVVEGMKLARG 226
E+ V +SA EIG +IA AM KVG++G++T+ +G + EN L VVEGM+ RG
Sbjct: 194 ED-SELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQFDRG 252
Query: 227 YISPYFITDQKTQKCELENPFILIHDKKISDINSLLKILELAVTVDKPILI 277
YISPYF+TD + E +N +L+ DKKI++ L+ +LE A+ PILI
Sbjct: 253 YISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYPILI 303
>AT1G55490.1 | Symbols: CPN60B, LEN1 | chaperonin 60 beta |
chr1:20715717-20718673 REVERSE LENGTH=600
Length = 600
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 152/231 (65%), Gaps = 1/231 (0%)
Query: 47 GVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKDGVTVAKSISFEDKAKNIGAGLVKQVA 106
GV+++A+ V VT+GPKGRNV++E + +PR+ DGVTVA+ + ED +NIGA LV+Q A
Sbjct: 74 GVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAA 133
Query: 107 KATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRNGINKAVAAVITDLKSRAVMI 166
TN AGDGTT + VL Q + EG K VAAG N + + GI K A++T+LK + +
Sbjct: 134 AKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEV 193
Query: 167 STPEEITQVGTISANGEREIGELIARAMEKVGKEGIITVADGNTLENELEVVEGMKLARG 226
E+ V +SA EIG +IA AM KVG++G++T+ +G + EN L VVEGM+ RG
Sbjct: 194 ED-SELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQFDRG 252
Query: 227 YISPYFITDQKTQKCELENPFILIHDKKISDINSLLKILELAVTVDKPILI 277
YISPYF+TD + E +N +L+ DKKI++ L+ +LE A+ PILI
Sbjct: 253 YISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYPILI 303
>AT5G56500.2 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr5:22874058-22876966 FORWARD LENGTH=597
Length = 597
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 158/251 (62%), Gaps = 3/251 (1%)
Query: 29 YVAKDISFGVGARA--AILQGVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKDGVTVAK 86
Y AK + F A + GV+++A+ V VT+GPKGRNV++E + +PR+ DGVTVA+
Sbjct: 50 YAAKQLHFNKDGTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAR 109
Query: 87 SISFEDKAKNIGAGLVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRN 146
+ ED +NIGA LV+Q A TN AGDGTT + VL Q ++ EG K VAAG N + +
Sbjct: 110 EVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 169
Query: 147 GINKAVAAVITDLKSRAVMISTPEEITQVGTISANGEREIGELIARAMEKVGKEGIITVA 206
GI K A++ +LK + + E+ V +SA E+G +IA AM KVG++G++T+
Sbjct: 170 GIEKTTKALVAELKKMSKEVED-SELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLE 228
Query: 207 DGNTLENELEVVEGMKLARGYISPYFITDQKTQKCELENPFILIHDKKISDINSLLKILE 266
+G + EN L VVEGM+ RGYISPYF+TD + E EN + + DKKI++ ++ ILE
Sbjct: 229 EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMCAEYENCKLFLVDKKITNARDIISILE 288
Query: 267 LAVTVDKPILI 277
A+ P+LI
Sbjct: 289 DAIKGGYPLLI 299
>AT5G56500.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr5:22874058-22876966 FORWARD LENGTH=597
Length = 597
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 158/251 (62%), Gaps = 3/251 (1%)
Query: 29 YVAKDISFGVGARA--AILQGVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKDGVTVAK 86
Y AK + F A + GV+++A+ V VT+GPKGRNV++E + +PR+ DGVTVA+
Sbjct: 50 YAAKQLHFNKDGTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAR 109
Query: 87 SISFEDKAKNIGAGLVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRN 146
+ ED +NIGA LV+Q A TN AGDGTT + VL Q ++ EG K VAAG N + +
Sbjct: 110 EVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 169
Query: 147 GINKAVAAVITDLKSRAVMISTPEEITQVGTISANGEREIGELIARAMEKVGKEGIITVA 206
GI K A++ +LK + + E+ V +SA E+G +IA AM KVG++G++T+
Sbjct: 170 GIEKTTKALVAELKKMSKEVED-SELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLE 228
Query: 207 DGNTLENELEVVEGMKLARGYISPYFITDQKTQKCELENPFILIHDKKISDINSLLKILE 266
+G + EN L VVEGM+ RGYISPYF+TD + E EN + + DKKI++ ++ ILE
Sbjct: 229 EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMCAEYENCKLFLVDKKITNARDIISILE 288
Query: 267 LAVTVDKPILI 277
A+ P+LI
Sbjct: 289 DAIKGGYPLLI 299
>AT3G13470.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr3:4389685-4392624 FORWARD LENGTH=596
Length = 596
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 153/233 (65%), Gaps = 5/233 (2%)
Query: 47 GVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKDGVTVAKSISFEDKAKNIGAGLVKQVA 106
GV+++A+ V VT+GPKGRNV++E + +PR+ DGVTVA+ + ED +NIGA LV+Q A
Sbjct: 70 GVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAA 129
Query: 107 KATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRNGINKAVAAVITDLK--SRAV 164
TN AGDGTT + VL Q + EG K VAAG N + + GI K A++ +LK S+ V
Sbjct: 130 AKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVNELKLMSKEV 189
Query: 165 MISTPEEITQVGTISANGEREIGELIARAMEKVGKEGIITVADGNTLENELEVVEGMKLA 224
S E+ V +SA E+G +IA AM KVG++G++T+ +G + EN L VVEGM+
Sbjct: 190 EDS---ELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQFD 246
Query: 225 RGYISPYFITDQKTQKCELENPFILIHDKKISDINSLLKILELAVTVDKPILI 277
RGYISPYF+TD + E +N +L+ DKK+++ L+ +LE A+ PILI
Sbjct: 247 RGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGVLEDAIRGGYPILI 299
>AT1G26230.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr1:9072388-9075272 REVERSE LENGTH=611
Length = 611
Score = 193 bits (491), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 156/249 (62%), Gaps = 3/249 (1%)
Query: 31 AKDISFGV-GARAAILQ-GVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKDGVTVAKSI 88
AK++ F G+ LQ G VA+ + VT+GPKGRNV+++ + PR+ DG TV K I
Sbjct: 40 AKEVHFNRDGSVTKKLQAGADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEI 99
Query: 89 SFEDKAKNIGAGLVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRNGI 148
ED +N+G LV+Q TN AGDG+T + +L ++TEG K ++AG N + + GI
Sbjct: 100 ELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIILAHGLITEGIKVISAGTNPIQVARGI 159
Query: 149 NKAVAAVITDLKSRAVMISTPEEITQVGTISANGEREIGELIARAMEKVGKEGIITVADG 208
K A++ +LKS + I E+ V +SA + E+G +I+ A ++VG+ G++T+ G
Sbjct: 160 EKTTKALVLELKSMSREIED-HELAHVAAVSAGNDYEVGNMISNAFQQVGRTGVVTIEKG 218
Query: 209 NTLENELEVVEGMKLARGYISPYFITDQKTQKCELENPFILIHDKKISDINSLLKILELA 268
L N LE+VEGM+ RGY+SPYF+TD++ ++ E + +L+ DKKI++ + KIL+ A
Sbjct: 219 KYLVNNLEIVEGMQFNRGYLSPYFVTDRRKREAEFHDCKLLLVDKKITNPKDMFKILDSA 278
Query: 269 VTVDKPILI 277
V + P+LI
Sbjct: 279 VKEEFPVLI 287
>AT2G28000.1 | Symbols: CPN60A, CH-CPN60A, SLP | chaperonin-60alpha
| chr2:11926603-11929184 FORWARD LENGTH=586
Length = 586
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 163/246 (66%), Gaps = 1/246 (0%)
Query: 32 KDISFGVGARAAILQGVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKDGVTVAKSISFE 91
K+I+F +RAA+ G+ ++A+ V +T+GP+GRNV++++ +P+V DGVT+A++I
Sbjct: 49 KEIAFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELP 107
Query: 92 DKAKNIGAGLVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRNGINKA 151
+ +N GA L+++VA TN +AGDGTT A++L + I+ G SV +G N + L+ GI+K
Sbjct: 108 NAMENAGAALIREVASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKT 167
Query: 152 VAAVITDLKSRAVMISTPEEITQVGTISANGEREIGELIARAMEKVGKEGIITVADGNTL 211
V +I +L+ +A + ++I V +ISA + IG +IA A++KVG +G++++ ++
Sbjct: 168 VQGLIEELQKKARPVKGRDDIRAVASISAGNDDLIGSMIADAIDKVGPDGVLSIESSSSF 227
Query: 212 ENELEVVEGMKLARGYISPYFITDQKTQKCELENPFILIHDKKISDINSLLKILELAVTV 271
E +EV EGM++ RGYISP F+T+ + E EN +LI D+KI+ I ++ ILE +
Sbjct: 228 ETTVEVEEGMEIDRGYISPQFVTNPEKLLAEFENARVLITDQKITAIKDIIPILEKTTQL 287
Query: 272 DKPILI 277
P+LI
Sbjct: 288 RAPLLI 293
>AT1G26230.2 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr1:9072388-9075047 REVERSE LENGTH=559
Length = 559
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 147/231 (63%), Gaps = 1/231 (0%)
Query: 47 GVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKDGVTVAKSISFEDKAKNIGAGLVKQVA 106
G VA+ + VT+GPKGRNV+++ + PR+ DG TV K I ED +N+G LV+Q
Sbjct: 6 GADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEIELEDPLENVGVKLVRQAG 65
Query: 107 KATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRNGINKAVAAVITDLKSRAVMI 166
TN AGDG+T + +L ++TEG K ++AG N + + GI K A++ +LKS + I
Sbjct: 66 AKTNDLAGDGSTTSIILAHGLITEGIKVISAGTNPIQVARGIEKTTKALVLELKSMSREI 125
Query: 167 STPEEITQVGTISANGEREIGELIARAMEKVGKEGIITVADGNTLENELEVVEGMKLARG 226
E+ V +SA + E+G +I+ A ++VG+ G++T+ G L N LE+VEGM+ RG
Sbjct: 126 ED-HELAHVAAVSAGNDYEVGNMISNAFQQVGRTGVVTIEKGKYLVNNLEIVEGMQFNRG 184
Query: 227 YISPYFITDQKTQKCELENPFILIHDKKISDINSLLKILELAVTVDKPILI 277
Y+SPYF+TD++ ++ E + +L+ DKKI++ + KIL+ AV + P+LI
Sbjct: 185 YLSPYFVTDRRKREAEFHDCKLLLVDKKITNPKDMFKILDSAVKEEFPVLI 235
>AT5G18820.1 | Symbols: EMB3007 | TCP-1/cpn60 chaperonin family
protein | chr5:6271549-6274153 FORWARD LENGTH=575
Length = 575
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 154/247 (62%), Gaps = 1/247 (0%)
Query: 31 AKDISFGVGARAAILQGVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKDGVTVAKSISF 90
AK I +G +R + G+ ++A+AV +T+GP+GRNV++ + +V DGVT+AKSI
Sbjct: 35 AKRILYGKDSREKLQAGIDKLADAVSITLGPRGRNVVLAEKD-TIKVINDGVTIAKSIEL 93
Query: 91 EDKAKNIGAGLVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRNGINK 150
D +N GA L+++VA N +AGDGTT A +L + ++ G ++A G N + ++NG+NK
Sbjct: 94 PDTIENAGATLIQEVAIKMNESAGDGTTTAIILAREMIKAGSLAIAFGANAVSVKNGMNK 153
Query: 151 AVAAVITDLKSRAVMISTPEEITQVGTISANGEREIGELIARAMEKVGKEGIITVADGNT 210
V ++ L+ +++ + +I V +ISA + +G LIA +EK+G +G+I++ +T
Sbjct: 154 TVKELVRVLQMKSIPVQGKNDIKAVASISAGNDEFVGNLIAETVEKIGPDGVISIESSST 213
Query: 211 LENELEVVEGMKLARGYISPYFITDQKTQKCELENPFILIHDKKISDINSLLKILELAVT 270
E + V EGMK +GY+SP+FIT+Q+ E + IL+ D+KI+ L+ +LE
Sbjct: 214 SETSVIVEEGMKFDKGYMSPHFITNQEKSTVEFDKAKILVTDQKITSAKELVPLLEKTSQ 273
Query: 271 VDKPILI 277
+ P+LI
Sbjct: 274 LSVPLLI 280
>AT5G20890.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr5:7087020-7089906 REVERSE LENGTH=527
Length = 527
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 37 GVGARAAILQGVSEVAEAVKVTMGPKGRNVIIEKSHRNP--RVTKDGVTVAKSISFEDKA 94
G AR A G +++ VK T+GPKG + I++ + R VT DG T+ KS+ ++ A
Sbjct: 16 GERARMASFVGAMAISDLVKSTLGPKGMDKILQSTGRGHAVTVTNDGATILKSLHIDNPA 75
Query: 95 KNIGAGLVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRNGINKA 151
A ++ ++K + GDGTT VL +L E K VA+ ++ M + G A
Sbjct: 76 ----AKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMA 128
>AT3G18190.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr3:6232226-6233836 FORWARD LENGTH=536
Length = 536
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 10/134 (7%)
Query: 41 RAAILQGVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKDGVTVAKSISFEDKAKNIGAG 100
R A + V++AV+ ++GPKG + +I ++ +T DG T+ + A A
Sbjct: 30 RFANINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKMEVLQPA----AK 85
Query: 101 LVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSVAA-GVNVMDLRNGINKAVAAVITDL 159
++ +++K+ ++AAGDGTT V+ A+L E C+S+ G++ + + ++KA I L
Sbjct: 86 MLVELSKSQDSAAGDGTTTVVVIAGALLKE-CQSLLTNGIHPTVISDSLHKACGKAIDIL 144
Query: 160 KSRAVMISTPEEIT 173
+ AV P E+T
Sbjct: 145 TAMAV----PVELT 154