Miyakogusa Predicted Gene
- Lj3g3v2664350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2664350.1 Non Chatacterized Hit- tr|I1KUR0|I1KUR0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.31208
PE,97.34,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DEAD,DNA/RNA helicase, DEAD/DEAH box type, N-termin,CUFF.44409.1
(413 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 789 0.0
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 787 0.0
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 771 0.0
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 770 0.0
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 764 0.0
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 757 0.0
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 745 0.0
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 511 e-145
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 463 e-131
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 283 2e-76
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 283 2e-76
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 281 6e-76
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 281 6e-76
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 279 3e-75
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 249 3e-66
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 249 3e-66
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 228 5e-60
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 228 8e-60
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 225 4e-59
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 223 2e-58
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 223 2e-58
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 218 4e-57
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 218 5e-57
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 214 1e-55
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 214 1e-55
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 212 4e-55
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 210 2e-54
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 207 1e-53
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 206 3e-53
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 202 5e-52
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 199 3e-51
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 199 3e-51
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 199 3e-51
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 199 3e-51
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 199 3e-51
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 198 5e-51
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 196 2e-50
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 196 3e-50
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 196 3e-50
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 196 3e-50
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 196 3e-50
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 195 6e-50
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 194 1e-49
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 192 4e-49
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 189 4e-48
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 184 1e-46
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 184 1e-46
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 184 1e-46
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 183 2e-46
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 183 2e-46
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 177 2e-44
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 175 4e-44
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 175 7e-44
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 170 1e-42
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 167 1e-41
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 167 1e-41
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 166 2e-41
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 163 2e-40
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 162 3e-40
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 158 7e-39
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 157 9e-39
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 156 2e-38
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 144 9e-35
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 143 3e-34
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 140 1e-33
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 140 1e-33
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 136 3e-32
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 134 1e-31
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 134 1e-31
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 130 2e-30
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 128 7e-30
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 127 2e-29
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 127 2e-29
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 124 2e-28
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 114 2e-25
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 114 2e-25
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 108 5e-24
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 86 5e-17
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 61 1e-09
AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase... 53 3e-07
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 51 1e-06
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 51 2e-06
AT4G37020.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 50 4e-06
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/414 (92%), Positives = 399/414 (96%), Gaps = 3/414 (0%)
Query: 1 MAGVAPEGSQFDARQYDAKMSDLLSSDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYG 59
MAG APEG+QFD RQ+D +++++L DGQD FFTSYDEV++SFDAMGLQENLLRGIYAYG
Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYG 58
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119
FE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRE
Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 118
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVH VVGTPGRVFDMLRRQSLR
Sbjct: 119 LAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 178
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
PD IKMFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 179 PDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 238
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNVEKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 300 RSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 359
RS DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 358
Query: 360 PENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELPSNVADLL 413
PENYLHRIGRSGRFGRKGVAINFVTLDD RML DIQKFYNV VEELPSNVADLL
Sbjct: 359 PENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 412
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/414 (92%), Positives = 400/414 (96%), Gaps = 3/414 (0%)
Query: 1 MAGVAPEGSQFDARQYDAKMSDLLSSDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYG 59
MAG APEG+QFDARQ+D K++++L +GQD FFTSYD+V++SFDAMGLQENLLRGIYAYG
Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYG 58
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119
FE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRE
Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 118
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH VVGTPGRVFDML+RQSLR
Sbjct: 119 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 178
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
D+IKMFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 179 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 238
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 300 RSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 359
RS DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 358
Query: 360 PENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELPSNVADLL 413
PENYLHRIGRSGRFGRKGVAINFVT DD RML DIQKFYNV VEELPSNVADLL
Sbjct: 359 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 412
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/414 (91%), Positives = 394/414 (95%), Gaps = 8/414 (1%)
Query: 1 MAGVAPEGSQFDARQYDAKMSDLLSSDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYG 59
MAG APEG+QFD RQ+D +++++L DGQD FFTSYDEV++SFDAMGLQENLLRG
Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRG----- 53
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119
FE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRE
Sbjct: 54 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 113
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVH VVGTPGRVFDMLRRQSLR
Sbjct: 114 LAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 173
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
PD IKMFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 174 PDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 233
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNVEKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 234 RILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 293
Query: 300 RSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 359
RS DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 294 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 353
Query: 360 PENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELPSNVADLL 413
PENYLHRIGRSGRFGRKGVAINFVTLDD RML DIQKFYNV VEELPSNVADLL
Sbjct: 354 PENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 407
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/414 (91%), Positives = 395/414 (95%), Gaps = 8/414 (1%)
Query: 1 MAGVAPEGSQFDARQYDAKMSDLLSSDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYG 59
MAG APEG+QFDARQ+D K++++L +GQD FFTSYD+V++SFDAMGLQENLLRG
Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRG----- 53
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119
FE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRE
Sbjct: 54 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 113
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH VVGTPGRVFDML+RQSLR
Sbjct: 114 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 173
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
D+IKMFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 174 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 233
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 234 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 293
Query: 300 RSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 359
RS DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 294 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 353
Query: 360 PENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELPSNVADLL 413
PENYLHRIGRSGRFGRKGVAINFVT DD RML DIQKFYNV VEELPSNVADLL
Sbjct: 354 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 407
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/414 (88%), Positives = 393/414 (94%), Gaps = 1/414 (0%)
Query: 1 MAGVAPEGSQFDARQYDAKMSDLLSSDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYG 59
MAG+A +G+Q+D RQ+D KM+ +L +G++ F+T+YDEV DSFDAM LQ +LLRGIYAYG
Sbjct: 1 MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYG 60
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119
FE+PSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLD LVQCQALVLAPTRE
Sbjct: 61 FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRE 120
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDYLGVK ACVGGTSVREDQR+LQ+GVH VVGTPGRVFD+LRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLR 180
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
D+IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKPV
Sbjct: 181 ADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPV 240
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNV+KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 241 RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300
Query: 300 RSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 359
RS DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360
Query: 360 PENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELPSNVADLL 413
PENYLHRIGRSGRFGRKGVAINF+T +D RM++DIQ+FYNV VEELPSNVADLL
Sbjct: 361 PENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSNVADLL 414
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/388 (94%), Positives = 378/388 (97%), Gaps = 1/388 (0%)
Query: 27 DGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQ 85
+GQD FFTSYD+V++SFDAMGLQENLLRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQ
Sbjct: 15 EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 74
Query: 86 SGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 145
SGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG
Sbjct: 75 SGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 134
Query: 146 TSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYD 205
TSVREDQRILQAGVH VVGTPGRVFDML+RQSLR D+IKMFVLDEADEMLSRGFKDQIYD
Sbjct: 135 TSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYD 194
Query: 206 IFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEW 265
IFQLLP KIQVGVFSATMPPEALEITRKFM+KPVRILVKRDELTLEGIKQFYVNVEKEEW
Sbjct: 195 IFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEW 254
Query: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREF 325
KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS DHTVSATHGDMDQNTRDIIMREF
Sbjct: 255 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 314
Query: 326 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTL 385
RSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINFVT
Sbjct: 315 RSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 374
Query: 386 DDSRMLSDIQKFYNVTVEELPSNVADLL 413
DD RML DIQKFYNV VEELPSNVADLL
Sbjct: 375 DDERMLFDIQKFYNVVVEELPSNVADLL 402
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/393 (92%), Positives = 380/393 (96%), Gaps = 3/393 (0%)
Query: 1 MAGVAPEGSQFDARQYDAKMSDLLSSDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYG 59
MAG APEG+QFDARQ+D K++++L +GQD FFTSYD+V++SFDAMGLQENLLRGIYAYG
Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYG 58
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119
FE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRE
Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 118
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH VVGTPGRVFDML+RQSLR
Sbjct: 119 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 178
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
D+IKMFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 179 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 238
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 300 RSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 359
RS DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 358
Query: 360 PENYLHRIGRSGRFGRKGVAINFVTLDDSRMLS 392
PENYLHRIGRSGRFGRKGVAINFVT DD RML
Sbjct: 359 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLC 391
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 511 bits (1316), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/377 (63%), Positives = 304/377 (80%)
Query: 37 EVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
E SF+ MG++E++LRG+Y YGFE+PSAIQQR ++P +G DVI QAQSGTGKT+
Sbjct: 32 EPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIAL 91
Query: 97 GILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
+ Q +D + QAL+L+PTRELA Q EK ++A+G + ++ HAC+GG SV ED R L+
Sbjct: 92 SVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLE 151
Query: 157 AGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQV 216
GVH V GTPGRV DM++R+SLR +IK+ +LDE+DEMLSRGFKDQIYD+++ LP +QV
Sbjct: 152 HGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQV 211
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYET 276
+ SAT+P E LE+T KFM +PV+ILVKRDELTLEGIKQF+V VEKEEWK +TLCDLY+T
Sbjct: 212 CLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDT 271
Query: 277 LAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336
L ITQ+VIF NT+RKVD+L++KMRS++ TVS+ HGDM Q RD IM EFRSG SRVLITT
Sbjct: 272 LTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITT 331
Query: 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQK 396
D+ ARGIDVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI++
Sbjct: 332 DVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQ 391
Query: 397 FYNVTVEELPSNVADLL 413
+Y+ ++E+P NVADL+
Sbjct: 392 YYSTQIDEMPMNVADLI 408
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 463 bits (1192), Expect = e-131, Method: Compositional matrix adjust.
Identities = 215/369 (58%), Positives = 281/369 (76%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SFD MG+ + +LRG+Y YG+++PS IQQR +VP KG DVI QAQSGTGKT+ + Q
Sbjct: 23 SFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQ 82
Query: 101 QLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 160
++ + Q LVL+P+RELA Q EK ++A+G + ++ HAC+GG S+ ED + L+ GVH
Sbjct: 83 IVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVH 142
Query: 161 TVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFS 220
V GTPGRV+DM++R SL+ ++K+ VLDE+DEMLS+G KDQIYD+++ LP IQV + S
Sbjct: 143 AVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCLIS 202
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 280
AT+P E LE+T KFM PVRILVK DELTLEGIKQ+YV+V+KEEWK +TLCDLY L I
Sbjct: 203 ATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTIN 262
Query: 281 QSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 340
Q++IF NTR+KVDWLT+KMRS++ VS+ HGD Q RD IM +FRS SRVLI +D+ A
Sbjct: 263 QAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWA 322
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNV 400
RGIDVQ VS VINYD+P PE Y+HRIGR+GRFGR+GVAINFV D + L DI++ Y
Sbjct: 323 RGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGT 382
Query: 401 TVEELPSNV 409
+ E+P+++
Sbjct: 383 KIREMPADL 391
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 221/370 (59%), Gaps = 2/370 (0%)
Query: 40 DSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ L+ +LL+GIY GFE+PS IQ+ I G D++ +A++GTGKT FC +L
Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL 183
Query: 100 QQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159
+++D QA++L PTRELA Q +V + L YL ++V GGTS+R+D L V
Sbjct: 184 EKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPV 243
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVF 219
H +VGTPGR+ D+ ++ M V+DEAD++LS F+ + ++ Q LP Q +F
Sbjct: 244 HLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMF 303
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 279
SAT P + + KP I + D+LTL G+ Q+Y VE E K+ L L+ L I
Sbjct: 304 SATFPVTVKAFKDRHLRKPYVINLM-DQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQI 361
Query: 280 TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 339
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + EFR+G+ R L+ TDL
Sbjct: 362 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLF 421
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYN 399
RGID+Q V++VIN+D P E+YLHR+GRSGRFG G+A+N VT +D + ++
Sbjct: 422 TRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELG 481
Query: 400 VTVEELPSNV 409
++ +PSN+
Sbjct: 482 TEIKPIPSNI 491
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 221/370 (59%), Gaps = 2/370 (0%)
Query: 40 DSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ L+ +LL+GIY GFE+PS IQ+ I G D++ +A++GTGKT FC +L
Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL 183
Query: 100 QQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159
+++D QA++L PTRELA Q +V + L YL ++V GGTS+R+D L V
Sbjct: 184 EKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPV 243
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVF 219
H +VGTPGR+ D+ ++ M V+DEAD++LS F+ + ++ Q LP Q +F
Sbjct: 244 HLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMF 303
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 279
SAT P + + KP I + D+LTL G+ Q+Y VE E K+ L L+ L I
Sbjct: 304 SATFPVTVKAFKDRHLRKPYVINLM-DQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQI 361
Query: 280 TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 339
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + EFR+G+ R L+ TDL
Sbjct: 362 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLF 421
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYN 399
RGID+Q V++VIN+D P E+YLHR+GRSGRFG G+A+N VT +D + ++
Sbjct: 422 TRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELG 481
Query: 400 VTVEELPSNV 409
++ +PSN+
Sbjct: 482 TEIKPIPSNI 491
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 281 bits (719), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 223/370 (60%), Gaps = 2/370 (0%)
Query: 40 DSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ L+ LL GIY GFERPS IQ+ I G D++ +A++GTGKTA FC +L
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 100 QQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159
+++D QA+++ PTRELA Q +V + LG +L ++V GGTS+++D L V
Sbjct: 191 EKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 250
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVF 219
H +VGTPGR+ D+ ++ + V+DEAD++LS+ F+ + + LP Q+ +F
Sbjct: 251 HLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMF 310
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 279
SAT P + +F+ P I + DELTL+GI QFY VE E K+ L L+ L I
Sbjct: 311 SATFPVTVKDFKDRFLTNPYVINLM-DELTLKGITQFYAFVE-ERQKIHCLNTLFSKLQI 368
Query: 280 TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 339
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 369 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 428
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYN 399
RGID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L I++
Sbjct: 429 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 488
Query: 400 VTVEELPSNV 409
++++P ++
Sbjct: 489 TEIKQIPPHI 498
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 281 bits (719), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 223/370 (60%), Gaps = 2/370 (0%)
Query: 40 DSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ L+ LL GIY GFERPS IQ+ I G D++ +A++GTGKTA FC +L
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 100 QQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159
+++D QA+++ PTRELA Q +V + LG +L ++V GGTS+++D L V
Sbjct: 191 EKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 250
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVF 219
H +VGTPGR+ D+ ++ + V+DEAD++LS+ F+ + + LP Q+ +F
Sbjct: 251 HLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMF 310
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 279
SAT P + +F+ P I + DELTL+GI QFY VE E K+ L L+ L I
Sbjct: 311 SATFPVTVKDFKDRFLTNPYVINLM-DELTLKGITQFYAFVE-ERQKIHCLNTLFSKLQI 368
Query: 280 TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 339
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 369 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 428
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYN 399
RGID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L I++
Sbjct: 429 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 488
Query: 400 VTVEELPSNV 409
++++P ++
Sbjct: 489 TEIKQIPPHI 498
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 220/368 (59%), Gaps = 2/368 (0%)
Query: 40 DSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ L+ +LLRGIY GFE+PS IQ+ I G D++ +A++GTGKT FC L
Sbjct: 154 NEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTL 213
Query: 100 QQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159
+++D QA++L PTRELA Q +V + L YL ++V GGTS+R+D L V
Sbjct: 214 EKIDPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPV 273
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVF 219
H +VGTPGR+ D+ ++ M V+DEAD++LS F+ I ++ Q LP Q+ +F
Sbjct: 274 HLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMF 333
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 279
SAT P +++ KP I+ D+LTL G+ Q+Y VE E K+ L L+ L I
Sbjct: 334 SATFPVTVKSFKDRYLKKPY-IINLMDQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQI 391
Query: 280 TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 339
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 392 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLF 451
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYN 399
RGID+Q V++VIN+D P E+YLHR+GRSGRFG G+A+N VT +D + ++
Sbjct: 452 TRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELG 511
Query: 400 VTVEELPS 407
++ +PS
Sbjct: 512 TEIKPIPS 519
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 210/368 (57%), Gaps = 6/368 (1%)
Query: 47 LQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 106
L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ++
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 107 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HTVVG 164
Q ALVL TRELA QI YL KV GG +++ + +L+ H VVG
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVG 172
Query: 165 TPGRVFDMLRRQSLRPDSIKMFVLDEADEML-SRGFKDQIYDIFQLLPGKIQVGVFSATM 223
TPGRV + R + L +++ F+LDE D+ML S + + +IF++ P QV +FSAT+
Sbjct: 173 TPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
Query: 224 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 282
E + +KFM P+ I V + +LTL G+ Q Y+ + + E K L DL + L Q
Sbjct: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQV 291
Query: 283 VIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
VIFV + + L + + H M Q R + F+ G R+L+ TDL+ RG
Sbjct: 292 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRG 351
Query: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV-TLDDSRMLSDIQKFYNVT 401
ID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV + DS +L+ +Q+ + V
Sbjct: 352 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVD 411
Query: 402 VEELPSNV 409
++ELP +
Sbjct: 412 IKELPEQI 419
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 210/368 (57%), Gaps = 6/368 (1%)
Query: 47 LQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 106
L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ++
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 107 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HTVVG 164
Q ALVL TRELA QI YL KV GG +++ + +L+ H VVG
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVG 172
Query: 165 TPGRVFDMLRRQSLRPDSIKMFVLDEADEML-SRGFKDQIYDIFQLLPGKIQVGVFSATM 223
TPGRV + R + L +++ F+LDE D+ML S + + +IF++ P QV +FSAT+
Sbjct: 173 TPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
Query: 224 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 282
E + +KFM P+ I V + +LTL G+ Q Y+ + + E K L DL + L Q
Sbjct: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQV 291
Query: 283 VIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
VIFV + + L + + H M Q R + F+ G R+L+ TDL+ RG
Sbjct: 292 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRG 351
Query: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV-TLDDSRMLSDIQKFYNVT 401
ID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV + DS +L+ +Q+ + V
Sbjct: 352 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVD 411
Query: 402 VEELPSNV 409
++ELP +
Sbjct: 412 IKELPEQI 419
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 218/430 (50%), Gaps = 48/430 (11%)
Query: 27 DGQDFFTSYDEVYDS-FDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQ 85
+G+ Y ++ S F L+ LLR I GFE PS +Q I G+DVI QA+
Sbjct: 32 NGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAK 91
Query: 86 SGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVG 144
SG GKTA F LQQ++ Q ALVL TRELA QI YL KV G
Sbjct: 92 SGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYG 151
Query: 145 GTSVREDQRILQAGV-HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEML-SRGFKDQ 202
G +++ + +L+ H VVGTPGRV + R + L +++ F+LDE D+ML S +
Sbjct: 152 GVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRD 211
Query: 203 IYDIFQLLPGKIQVGVFSATMPPEALEITRKFMN-------------------------- 236
+ +IF++ P QV +FSAT+ E + +KFM
Sbjct: 212 VQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFP 271
Query: 237 ---------------KPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 280
P+ I V + +LTL G+ Q Y+ + + E K L DL + L
Sbjct: 272 RFHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFN 330
Query: 281 QSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 340
Q VIFV + + L + + H M Q R + F+ G R+L+ TDL+
Sbjct: 331 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVG 390
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV-TLDDSRMLSDIQKFYN 399
RGID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV + DS +L+ +Q+ +
Sbjct: 391 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFE 450
Query: 400 VTVEELPSNV 409
V ++ELP +
Sbjct: 451 VDIKELPEQI 460
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 195/337 (57%), Gaps = 6/337 (1%)
Query: 78 LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-G 136
+DVI QA+SG GKTA F LQQ++ Q ALVL TRELA QI YL
Sbjct: 1 MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 60
Query: 137 VKVHACVGGTSVREDQRILQAGV-HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEML 195
KV GG +++ + +L+ H VVGTPGRV + R + L +++ F+LDE D+ML
Sbjct: 61 TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 120
Query: 196 -SRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGI 253
S + + +IF++ P QV +FSAT+ E + +KFM P+ I V + +LTL G+
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180
Query: 254 KQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
Q Y+ + + E K L DL + L Q VIFV + + L + + H M
Sbjct: 181 VQHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 239
Query: 314 DQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRF 373
Q R + F+ G R+L+ TDL+ RGID+++V++VINYD+P + YLHR+GR+GRF
Sbjct: 240 SQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 299
Query: 374 GRKGVAINFV-TLDDSRMLSDIQKFYNVTVEELPSNV 409
G KG+AI FV + DS +L+ +Q+ + V ++ELP +
Sbjct: 300 GTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 336
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 225/400 (56%), Gaps = 28/400 (7%)
Query: 33 TSYDEVYDS---FDAMGLQENLLRGIYA-YGFERPSAIQQRGI----VPFCKGLDVIQQA 84
TS D Y S F+ + L L++G+Y FE+PS IQ + P K L I QA
Sbjct: 81 TSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHL--IAQA 138
Query: 85 QSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 144
+G+GKT F G+L ++D L + QAL + PTRELA Q +V++ +G + G+ V
Sbjct: 139 HNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVP 198
Query: 145 GTS--VREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSR-GFKD 201
++ R H V+GTPG + + + L + +K+ V DEAD ML+ GF+D
Sbjct: 199 DSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRD 258
Query: 202 Q----IYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFY 257
+ DI ++ P QV +FSAT + + + P ++ VKR++L L+ +KQ+
Sbjct: 259 DSLKIMKDIGRVNPN-FQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYK 317
Query: 258 VNVEKEEWKLETLCD-LYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQN 316
V KE+ K+E + D + E I Q++IFV T+ + + + V++ HG++ ++
Sbjct: 318 VVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTES 377
Query: 317 TRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPEN-------YLHRIGR 369
RD I++EF+ ++VLI TD++ARG D Q+V+LV+NY+LPT+ E YLHR+GR
Sbjct: 378 DRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGR 437
Query: 370 SGRFGRKGVAINFVTLD--DSRMLSDIQKFYNVTVEELPS 407
+GRFGRKG N + D D ++ I+K++ V+E+ S
Sbjct: 438 AGRFGRKGAVFNLLLDDGWDKEVMEKIEKYFEANVKEIKS 477
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 223/420 (53%), Gaps = 29/420 (6%)
Query: 9 SQFDARQYDAKMSDLLSSDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQ 68
S D D +++ + DG++ S + L + L + G IQ+
Sbjct: 80 SDHDEYDLDGDNNNVEADDGEELAIS---------KLSLPQRLEESLEKRGITHLFPIQR 130
Query: 69 RGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-----DYGLVQ-----CQALVLAPTR 118
+VP +G D+I +A++GTGKT F I+++L DY + + LVLAPTR
Sbjct: 131 AVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTR 190
Query: 119 ELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQS 177
ELA+Q+EK ++ YL CV GG S Q L GV VVGTPGR+ D++ +S
Sbjct: 191 ELAKQVEKEIKESAPYLST---VCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRS 247
Query: 178 LRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNK 237
L+ ++ VLDEAD+ML+ GF++ + I + LP K Q +FSATMP ++ RK+++
Sbjct: 248 LKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDN 307
Query: 238 PVRI--LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDW 294
P+ I + +DE EGIK Y K L DL A ++++F T+R D
Sbjct: 308 PLNIDLVGDQDEKLAEGIK-LYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADE 366
Query: 295 LTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINY 354
++ + SN A HGD+ Q+ R+ + FR G VL+ TD+ +RG+D+ V LVI+Y
Sbjct: 367 VSLAL-SNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHY 425
Query: 355 DLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEEL-PSNVADLL 413
+LP PE ++HR GR+GR G++G AI T R + +++ E + P V DLL
Sbjct: 426 ELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLL 485
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 223/420 (53%), Gaps = 29/420 (6%)
Query: 9 SQFDARQYDAKMSDLLSSDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQ 68
S D D +++ + DG++ S + L + L + G IQ+
Sbjct: 80 SDHDEYDLDGDNNNVEADDGEELAIS---------KLSLPQRLEESLEKRGITHLFPIQR 130
Query: 69 RGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-----DYGLVQ-----CQALVLAPTR 118
+VP +G D+I +A++GTGKT F I+++L DY + + LVLAPTR
Sbjct: 131 AVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTR 190
Query: 119 ELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQS 177
ELA+Q+EK ++ YL CV GG S Q L GV VVGTPGR+ D++ +S
Sbjct: 191 ELAKQVEKEIKESAPYLST---VCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRS 247
Query: 178 LRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNK 237
L+ ++ VLDEAD+ML+ GF++ + I + LP K Q +FSATMP ++ RK+++
Sbjct: 248 LKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDN 307
Query: 238 PVRI--LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDW 294
P+ I + +DE EGIK Y K L DL A ++++F T+R D
Sbjct: 308 PLNIDLVGDQDEKLAEGIK-LYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADE 366
Query: 295 LTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINY 354
++ + SN A HGD+ Q+ R+ + FR G VL+ TD+ +RG+D+ V LVI+Y
Sbjct: 367 VSLAL-SNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHY 425
Query: 355 DLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEEL-PSNVADLL 413
+LP PE ++HR GR+GR G++G AI T R + +++ E + P V DLL
Sbjct: 426 ELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLL 485
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/435 (32%), Positives = 217/435 (49%), Gaps = 35/435 (8%)
Query: 10 QFDARQYDAKMSDLLSSDG----QDFFTSYD-----EVYDSFDAMGLQENLLRGIYAYGF 60
+ D D ++ ++ D +DF SY S++ L LL+ + G+
Sbjct: 274 RVDRHWSDKRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGY 333
Query: 61 ERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ--------AL 112
++PS IQ I + DVI A++G+GKTA F +L + + A+
Sbjct: 334 KKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAV 393
Query: 113 VLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDM 172
V+APTRELAQQIE+ YLG +V + VGG S+ E + G V+ TPGR+ D
Sbjct: 394 VMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDC 453
Query: 173 LRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPG---------------KI--Q 215
L R+ + VLDEAD M+ GF+ Q+ + +P KI
Sbjct: 454 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRT 513
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYE 275
+FSATMPP + RK++ PV + + T + I Q +V + KE K L L +
Sbjct: 514 TYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQ-HVIMMKESEKFFRLQKLLD 572
Query: 276 TLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 335
L +++FVNT++ D + + + V+ HG Q R+I + FR+ VL+
Sbjct: 573 ELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVA 632
Query: 336 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQ 395
TD++ RGID+ V+ VINYD+P E Y HRIGR+GR G+ GVA +F+TL D+ + D++
Sbjct: 633 TDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLK 692
Query: 396 KFYNVTVEELPSNVA 410
+ + +P +A
Sbjct: 693 QMLVQSNSAVPPELA 707
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 71 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-----DYGLVQCQA-----LVLAPTREL 120
+VP +G D+I +A++GTGKT F I+++L DY + LVLAPTREL
Sbjct: 40 LVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTREL 99
Query: 121 AQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
A+Q+EK ++ YL CV GG S Q L GV VVGTPGR+ D++ +SL+
Sbjct: 100 AKQVEKEIKESAPYLST---VCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLK 156
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
++ VLDEAD+ML+ GF++ + I + LP K Q +FSATMP ++ RK+++ P+
Sbjct: 157 LGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPL 216
Query: 240 RI--LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLT 296
I + +DE EGIK Y K L DL A ++++F T+R D ++
Sbjct: 217 NIDLVGDQDEKLAEGIK-LYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS 275
Query: 297 DKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDL 356
+ SN A HGD+ Q+ R+ + FR G VL+ TD+ +RG+D+ V LVI+Y+L
Sbjct: 276 LAL-SNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYEL 334
Query: 357 PTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEEL-PSNVADLL 413
P PE ++HR GR+GR G++G AI T R + +++ E + P V DLL
Sbjct: 335 PNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLL 392
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 198/381 (51%), Gaps = 12/381 (3%)
Query: 42 FDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F +N+L I GF P+ IQ +G KG D+I A++G+GKT + L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 102 L--------DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 153
+ D G + L+LAPTRELA QI++ R G GV+ GG R
Sbjct: 227 VSAQPRLGQDDGPI---VLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIR 283
Query: 154 ILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGK 213
L+ GV V+ TPGR+ DML Q + VLDEAD ML GF+ QI I +
Sbjct: 284 DLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPD 343
Query: 214 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL-EGIKQFYVNVEKEEWKLETLCD 272
Q ++SAT P E + R+F+ P + ++ +L + I Q V E L
Sbjct: 344 RQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTL 403
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRV 332
L + + ++ +IFV T+R D +T ++R + A HGD Q+ RD ++ EF+SG S +
Sbjct: 404 LKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPI 463
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLS 392
+ TD+ ARG+DV+ + V+NYD P E+Y+HRIGR+GR G KG+A F T D+++
Sbjct: 464 MTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAR 523
Query: 393 DIQKFYNVTVEELPSNVADLL 413
++ K + +P ++ L+
Sbjct: 524 ELVKILQEAGQVVPPTLSALV 544
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 197/378 (52%), Gaps = 6/378 (1%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF +G + +L + GF P+ IQ +G KG D+I A++G+GKT ++ +
Sbjct: 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159
Query: 101 QLDYGLVQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 155
++ + LVLAPTRELA QI++ G +K GG R L
Sbjct: 160 HVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDL 219
Query: 156 QAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQ 215
Q GV V+ TPGR+ DM+ + + VLDEAD ML GF QI I + Q
Sbjct: 220 QKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQ 279
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYE 275
+SAT P E ++++KF+ P ++++ +L + V+V E K L L E
Sbjct: 280 TLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLE 339
Query: 276 TLAI-TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 334
+ ++ ++F++T++ D +T ++R + + HGD Q RD ++ EFRSG S ++
Sbjct: 340 DIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMT 399
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDI 394
TD+ ARG+DV+ V VINYD P E+Y+HRIGR+GR G KG A F T+ ++R ++
Sbjct: 400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKEL 459
Query: 395 QKFYNVTVEELPSNVADL 412
+++ +A +
Sbjct: 460 TNILQEAGQKVSPELASM 477
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 202/372 (54%), Gaps = 13/372 (3%)
Query: 45 MGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 102
+G+ +++ + G E+ IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 121 LGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 180
Query: 103 ---DYGLVQ-CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQA 157
+G + Q LVLAPTRELA+Q+EK R L C+ GGT + + R L
Sbjct: 181 FNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMRELNY 237
Query: 158 GVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
G+ VGTPGR+ D+++R +L ++ VLDEAD+ML GF + + I Q LP K Q
Sbjct: 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 218 VFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYE 275
+FSATMP +T+K++N P+ I + D+ +GI + + + + E
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKE 357
Query: 276 TLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 335
+ ++F T+R D L + + + A HGD+ Q R+ + FR G+ +L+
Sbjct: 358 HGKGGKCIVFTQTKRDADRLAFGL-AKSYKCEALHGDISQAQRERTLAGFRDGNFSILVA 416
Query: 336 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQ 395
TD+ ARG+DV V LVI+Y+LP E ++HR GR+GR G+KG AI D +R + I+
Sbjct: 417 TDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIE 476
Query: 396 KFYNVTVEELPS 407
K ELPS
Sbjct: 477 KEVGSRFNELPS 488
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 204/373 (54%), Gaps = 15/373 (4%)
Query: 45 MGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-D 103
+G+ +++ + + G E+ IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 109 LGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 168
Query: 104 YGLVQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQA 157
Y + LVLAPTRELA+Q+EK R L C+ GGT + + R L
Sbjct: 169 YNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMRQLDY 225
Query: 158 GVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
GV VGTPGRV D+++R +L ++ VLDEAD+ML GF + + I + LP K Q
Sbjct: 226 GVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSM 285
Query: 218 VFSATMPPEALEITRKFMNKP--VRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY- 274
+FSATMP +T+K++N P V ++ D+ +GI + + + + + L
Sbjct: 286 MFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSI-IADSYGRASIIGPLVT 344
Query: 275 ETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 334
E + ++F T+R D L+ + + A HGD+ Q+ R+ + FR G +L+
Sbjct: 345 EHAKGGKCIVFTQTKRDADRLSYAL-ARSFKCEALHGDISQSQRERTLAGFRDGHFNILV 403
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDI 394
TD+ ARG+DV V L+I+Y+LP E ++HR GR+GR G+KG AI + D SR + I
Sbjct: 404 ATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKII 463
Query: 395 QKFYNVTVEELPS 407
++ ELPS
Sbjct: 464 EREVGSRFTELPS 476
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 207/384 (53%), Gaps = 17/384 (4%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGIL 99
+F+ G ++ I +E+P+AIQ + + G DVI A++G+GKTA F I+
Sbjct: 229 TFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIV 288
Query: 100 QQLDYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 155
+D +Q ++ APTRELA QI + G++V A GG S E + L
Sbjct: 289 HIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKEL 348
Query: 156 QAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIF-QLLPGKI 214
+AG VV TPGR+ DML+ ++L VLDEAD M GF+ Q+ I Q+ P +
Sbjct: 349 KAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDR- 407
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV-----EKEEWKLET 269
Q +FSATMP + ++ R+ ++ P+R+ V + E I Q VNV EK W LE
Sbjct: 408 QTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQV-VNVIPSDAEKLPWLLEK 466
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGS 329
L + + + ++F + + VD + ++ N V+A HGD DQ +R +++F+SG
Sbjct: 467 LPGMIDEGDV---LVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGV 523
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFG-RKGVAINFVTLDDS 388
VLI TD+ ARG+D++ + V+NYD+ + ++HRIGR+GR G R GVA VT ++
Sbjct: 524 HHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREA 583
Query: 389 RMLSDIQKFYNVTVEELPSNVADL 412
R ++ + +P + DL
Sbjct: 584 RFAGELVNSLVAAGQNVPPELTDL 607
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 206/372 (55%), Gaps = 8/372 (2%)
Query: 42 FDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F+++ L N+ I G++ P+ IQ++ + G+DV+ A++G+GKTA F +L++
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 102 LDYGLVQ--CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159
L + Q +AL+L+PTR+LA+Q K + LG + ++V VGG S+ + L G
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 160 HTVVGTPGRVFDMLRR---QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQV 216
++ TPGR+ +L +LR +++ V DEAD + GF +Q++ I L Q
Sbjct: 150 DVIIATPGRLMHLLSEVDDMTLR--TVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQT 207
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYET 276
+FSAT+P E + + +P + + + +K ++ V EE L + E
Sbjct: 208 LLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKYSALLYLVREH 267
Query: 277 LAI-TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 335
++ Q++IFV+T+ V+++ + + S +GDMDQ+ R I + FR+ + +LI
Sbjct: 268 ISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIV 327
Query: 336 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQ 395
TD+ ARGID+ + VIN+D P +P+ ++HR+GR+ R GR G A +FVT +D + D+
Sbjct: 328 TDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPEDMPYMLDLH 387
Query: 396 KFYNVTVEELPS 407
F + V P+
Sbjct: 388 LFLSKPVRPAPT 399
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 201/376 (53%), Gaps = 10/376 (2%)
Query: 46 GLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-DY 104
GL +L + +E+P IQ + + G D I A++G+GKT F +L+ + D
Sbjct: 197 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 256
Query: 105 GLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 160
V+ LV+APTREL QQI +R LG++ GG+ V + L+ G
Sbjct: 257 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 316
Query: 161 TVVGTPGRVFDMLRRQSLRPDSIK---MFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
VV TPGR+ D+L S + +++ V+DEAD M GF+ QI I Q + + Q
Sbjct: 317 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTV 376
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY-ET 276
+FSAT P + + RK +NKPV I V + + I Q V V E + L +L E
Sbjct: 377 LFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQL-VEVRPESDRFLRLLELLGEW 435
Query: 277 LAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336
+ ++FV ++ K D L M + + + HG DQ R+ + +F++ +LI T
Sbjct: 436 SEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIAT 495
Query: 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQK 396
+ ARG+DV+++ LV+N+D P E+Y+HR+GR+GR GRKG A+ F++ DD++ D+ K
Sbjct: 496 SVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVK 555
Query: 397 FYNVTVEELPSNVADL 412
++ + +P ++ L
Sbjct: 556 ALELSEQPVPDDLKAL 571
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 208/397 (52%), Gaps = 23/397 (5%)
Query: 33 TSYDEV---YDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTG 89
TS D V ++F + L E L I + +P+ +Q+ I G D++ AQ+G+G
Sbjct: 136 TSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSG 195
Query: 90 KTATFC----SGILQ----QLDYGL--VQCQALVLAPTRELAQQIEKVMRALGDYLGVKV 139
KTA FC SGI++ + G+ V A++L+PTRELA QI R GVKV
Sbjct: 196 KTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKV 255
Query: 140 HACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGF 199
GGT V + R L+ GV +V TPGR+ D+L R + ++ LDEAD ML GF
Sbjct: 256 VVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGF 315
Query: 200 KDQIYDIFQLL----PGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ 255
+ QI I Q + PG Q +FSAT P E + F++ + + V R + + I Q
Sbjct: 316 EPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQ 375
Query: 256 ---FYVNVEKEEWKLETLCDLYETLAITQ---SVIFVNTRRKVDWLTDKMRSNDHTVSAT 309
F + +K ++ L E + +++FV T++ D L + + N +
Sbjct: 376 RVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTI 435
Query: 310 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGR 369
HGD Q R++ +R F++G + +L+ TD+ ARG+D+ V+ V+N+DLP ++Y+HRIGR
Sbjct: 436 HGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 495
Query: 370 SGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELP 406
+GR G G+A F +++ M + + +E+P
Sbjct: 496 TGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVP 532
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 204/386 (52%), Gaps = 20/386 (5%)
Query: 40 DSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC---- 95
++F + L + L I + RP+ +Q+ I D++ AQ+G+GKTA FC
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 96 SGIL--QQLDYG----LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 149
SGI+ Q ++ V A++L+PTRELA QI + GVKV GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 150 EDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQL 209
+ R L+ G +V TPGR+ D+L R + I+ LDEAD ML GF+ QI I +
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 210 LP----GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEW 265
+ G Q +FSAT P + + FM+ + + V R + + I Q V +E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQ-RVEFVQESD 389
Query: 266 KLETLCDLYETLAITQ-----SVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDI 320
K L DL TQ +++FV T+R D L + + N+ ++ HGD Q R++
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 321 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAI 380
+R F++G + +L+ TD+ ARG+D+ V+ V+N+DLP ++Y+HRIGR+GR G+ G+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
Query: 381 NFVTLDDSRMLSDIQKFYNVTVEELP 406
F +++++ + + +E+P
Sbjct: 510 AFFNENNAQLARSLAELMQEANQEVP 535
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 204/386 (52%), Gaps = 20/386 (5%)
Query: 40 DSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC---- 95
++F + L + L I + RP+ +Q+ I D++ AQ+G+GKTA FC
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 96 SGIL--QQLDYG----LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 149
SGI+ Q ++ V A++L+PTRELA QI + GVKV GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 150 EDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQL 209
+ R L+ G +V TPGR+ D+L R + I+ LDEAD ML GF+ QI I +
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 210 LP----GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEW 265
+ G Q +FSAT P + + FM+ + + V R + + I Q V +E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQ-RVEFVQESD 389
Query: 266 KLETLCDLYETLAITQ-----SVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDI 320
K L DL TQ +++FV T+R D L + + N+ ++ HGD Q R++
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 321 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAI 380
+R F++G + +L+ TD+ ARG+D+ V+ V+N+DLP ++Y+HRIGR+GR G+ G+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
Query: 381 NFVTLDDSRMLSDIQKFYNVTVEELP 406
F +++++ + + +E+P
Sbjct: 510 AFFNENNAQLARSLAELMQEANQEVP 535
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 204/386 (52%), Gaps = 20/386 (5%)
Query: 40 DSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC---- 95
++F + L + L I + RP+ +Q+ I D++ AQ+G+GKTA FC
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 96 SGIL--QQLDYG----LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 149
SGI+ Q ++ V A++L+PTRELA QI + GVKV GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 150 EDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQL 209
+ R L+ G +V TPGR+ D+L R + I+ LDEAD ML GF+ QI I +
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 210 LP----GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEW 265
+ G Q +FSAT P + + FM+ + + V R + + I Q V +E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQ-RVEFVQESD 389
Query: 266 KLETLCDLYETLAITQ-----SVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDI 320
K L DL TQ +++FV T+R D L + + N+ ++ HGD Q R++
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 321 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAI 380
+R F++G + +L+ TD+ ARG+D+ V+ V+N+DLP ++Y+HRIGR+GR G+ G+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
Query: 381 NFVTLDDSRMLSDIQKFYNVTVEELP 406
F +++++ + + +E+P
Sbjct: 510 AFFNENNAQLARSLAELMQEANQEVP 535
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 16/379 (4%)
Query: 46 GLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-DY 104
GL +L + +E+P IQ + + G D I A++G+GKT F +L+ + D
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 594
Query: 105 GLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 160
V+ LV+APTREL QQI +R LG++ GG+ V + L+ G
Sbjct: 595 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 654
Query: 161 TVVGTPGRVFDMLRRQSLRPDSIK---MFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
VV TPGR+ D+L S + +++ V+DEAD M GF+ QI I Q + + Q
Sbjct: 655 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTV 714
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWK----LETLCDL 273
+FSAT P + + RK +NKPV I V + + I Q V V E + LE L +
Sbjct: 715 LFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQL-VEVRPESDRFLRLLELLGEW 773
Query: 274 YETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 333
E I ++FV ++ K D L M + + + HG DQ R+ + +F++ +L
Sbjct: 774 SEKGKI---LVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLL 830
Query: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSD 393
I T + ARG+DV+++ LV+N+D P E+Y+HR+GR+GR GRKG A+ F++ DD++ D
Sbjct: 831 IATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPD 890
Query: 394 IQKFYNVTVEELPSNVADL 412
+ K ++ + +P ++ L
Sbjct: 891 LVKALELSEQPVPDDLKAL 909
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 199/387 (51%), Gaps = 21/387 (5%)
Query: 39 YDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 98
Y +F++ GL +LR + + GF P+ IQ + + D++ A++G+GKT G
Sbjct: 434 YITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTL----GY 489
Query: 99 LQQLDYGLVQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 150
L L C+ L+LAPTRELA QI+ G + GG
Sbjct: 490 LIPAFILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGP 549
Query: 151 DQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLL 210
+ L+ G VV TPGR+ D+L + + + + VLDEAD ML GF+ QI I +
Sbjct: 550 QLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEI 609
Query: 211 PGKIQVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNV----EKEEW 265
P + Q +++AT P E +I + PV++ + R DEL YV V EKE
Sbjct: 610 PPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKER- 668
Query: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREF 325
+LE + E ++ +IF +T+R D L + + V HGD Q RD ++ +F
Sbjct: 669 RLEQILRSQERG--SKVIIFCSTKRLCDHLARSVGRHFGAV-VIHGDKTQGERDWVLNQF 725
Query: 326 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTL 385
RSG S VLI TD+ ARG+D++ + +VINYD PT E+Y+HRIGR+GR G GVA F T
Sbjct: 726 RSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTE 785
Query: 386 DDSRMLSDIQKFYNVTVEELPSNVADL 412
D + D+ K +++P V D+
Sbjct: 786 QDWKYAPDLIKVLEGANQQVPPQVRDI 812
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 197/381 (51%), Gaps = 13/381 (3%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF+A GL LLR +Y+ GF PS IQ + + D++ A++G+GKT +
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 101 QL----DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
L + + LVL+PTRELA QI+ G + GG + ++
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 281
Query: 157 AGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQV 216
GV VV TPGR+ D+L + + + VLDEAD ML GF+ QI I +P K Q
Sbjct: 282 RGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQT 341
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKR-DEL----TLEGIKQFYVNVEKEEWKLETLC 271
+++AT P E +I + P ++ + DEL ++ + +EK +LE +
Sbjct: 342 LMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHS-RLEQIL 400
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSR 331
E ++ +IF +T+R D L + + +A HGD Q RD ++ +FRSG +
Sbjct: 401 RSQEPG--SKIIIFCSTKRMCDQLARNL-TRTFGAAAIHGDKSQAERDDVLNQFRSGRTP 457
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRML 391
VL+ TD+ ARG+DV+ + +V+NYD P E+Y+HRIGR+GR G G+A F D++
Sbjct: 458 VLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHA 517
Query: 392 SDIQKFYNVTVEELPSNVADL 412
SD+ K +++P V ++
Sbjct: 518 SDLIKILEGANQKVPPQVREM 538
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 201/383 (52%), Gaps = 17/383 (4%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGIL 99
SF+A G LLR + + GF P+ IQ + +G D++ A++G+GKT + G L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 100 --QQL-DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
Q++ + + LVL+PTRELA QI++ G + GG R L+
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 157 AGVHTVVGTPGRVFDML--RRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKI 214
G VV TPGR+ D+L RR SLR I VLDEAD ML GF+ QI I + +P K
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLR--QISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNV----EKEEWKLET 269
Q +++AT P +I + P ++ + DEL ++ V EK+ +LE
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQR-RLEQ 395
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGS 329
+ E ++ +IF +T+R D LT + + +A HGD Q RD ++ +FRSG
Sbjct: 396 ILRSQEPG--SKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSGR 452
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSR 389
+ VL+ TD+ ARG+DV+ + V+NYD P E+Y+HRIGR+GR G G A F DS+
Sbjct: 453 TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSK 512
Query: 390 MLSDIQKFYNVTVEELPSNVADL 412
SD+ K + +P + ++
Sbjct: 513 HASDLIKILEGANQRVPPQIREM 535
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 201/383 (52%), Gaps = 17/383 (4%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGIL 99
SF+A G LLR + + GF P+ IQ + +G D++ A++G+GKT + G L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 100 --QQL-DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
Q++ + + LVL+PTRELA QI++ G + GG R L+
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 157 AGVHTVVGTPGRVFDML--RRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKI 214
G VV TPGR+ D+L RR SLR I VLDEAD ML GF+ QI I + +P K
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLR--QISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNV----EKEEWKLET 269
Q +++AT P +I + P ++ + DEL ++ V EK+ +LE
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQR-RLEQ 395
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGS 329
+ E ++ +IF +T+R D LT + + +A HGD Q RD ++ +FRSG
Sbjct: 396 ILRSQEPG--SKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSGR 452
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSR 389
+ VL+ TD+ ARG+DV+ + V+NYD P E+Y+HRIGR+GR G G A F DS+
Sbjct: 453 TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSK 512
Query: 390 MLSDIQKFYNVTVEELPSNVADL 412
SD+ K + +P + ++
Sbjct: 513 HASDLIKILEGANQRVPPQIREM 535
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 201/383 (52%), Gaps = 17/383 (4%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGIL 99
SF+A G LLR + + GF P+ IQ + +G D++ A++G+GKT + G L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 100 --QQL-DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
Q++ + + LVL+PTRELA QI++ G + GG R L+
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 157 AGVHTVVGTPGRVFDML--RRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKI 214
G VV TPGR+ D+L RR SLR I VLDEAD ML GF+ QI I + +P K
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLR--QISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNV----EKEEWKLET 269
Q +++AT P +I + P ++ + DEL ++ V EK+ +LE
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQR-RLEQ 395
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGS 329
+ E ++ +IF +T+R D LT + + +A HGD Q RD ++ +FRSG
Sbjct: 396 ILRSQEPG--SKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSGR 452
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSR 389
+ VL+ TD+ ARG+DV+ + V+NYD P E+Y+HRIGR+GR G G A F DS+
Sbjct: 453 TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSK 512
Query: 390 MLSDIQKFYNVTVEELPSNVADL 412
SD+ K + +P + ++
Sbjct: 513 HASDLIKILEGANQRVPPQIREM 535
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 201/383 (52%), Gaps = 17/383 (4%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGIL 99
SF+A G LLR + + GF P+ IQ + +G D++ A++G+GKT + G L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 100 --QQL-DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
Q++ + + LVL+PTRELA QI++ G + GG R L+
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 157 AGVHTVVGTPGRVFDML--RRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKI 214
G VV TPGR+ D+L RR SLR I VLDEAD ML GF+ QI I + +P K
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLR--QISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNV----EKEEWKLET 269
Q +++AT P +I + P ++ + DEL ++ V EK+ +LE
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQR-RLEQ 395
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGS 329
+ E ++ +IF +T+R D LT + + +A HGD Q RD ++ +FRSG
Sbjct: 396 ILRSQEPG--SKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSGR 452
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSR 389
+ VL+ TD+ ARG+DV+ + V+NYD P E+Y+HRIGR+GR G G A F DS+
Sbjct: 453 TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSK 512
Query: 390 MLSDIQKFYNVTVEELPSNVADL 412
SD+ K + +P + ++
Sbjct: 513 HASDLIKILEGANQRVPPQIREM 535
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 210/399 (52%), Gaps = 27/399 (6%)
Query: 33 TSYDEV---YDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTG 89
TS D V ++F + L E L I + +P+ +Q+ I +G D++ AQ+G+G
Sbjct: 149 TSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSG 208
Query: 90 KTATFC----SGILQ----QLDYG--LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKV 139
KTA FC SGI++ Q G V A++L+PTRELA QI + GVKV
Sbjct: 209 KTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKV 268
Query: 140 HACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGF 199
GGT + + R L+ GV +V TPGR+ D+L R + I+ LDEAD ML GF
Sbjct: 269 VVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGF 328
Query: 200 KDQIYDIFQ---LLP-GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ 255
+ QI I + + P G Q +FSAT P E + F+ + + V R + + I Q
Sbjct: 329 EPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQ 388
Query: 256 ---FYVNVEKEEWKLETLCDLYET-----LAITQSVIFVNTRRKVDWLTDKMRSNDHTVS 307
F ++ +K ++ L E A+T ++FV T+R D L + + N +
Sbjct: 389 RVEFVLDSDKRSHLMDLLHAQRENGIQGKQALT--LVFVETKRGADSLENWLCINGFPAT 446
Query: 308 ATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRI 367
+ HGD Q R++ ++ F+SG + +L+ TD+ ARG+D+ V+ V+N+DLP ++Y+HRI
Sbjct: 447 SIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 506
Query: 368 GRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELP 406
GR+GR G+ G+A F ++ + + + +E+P
Sbjct: 507 GRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVP 545
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 195/375 (52%), Gaps = 9/375 (2%)
Query: 31 FFTSYDEVY---DSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSG 87
FF++ D V D+F + L LLR G+++P+ IQ I G D+ A +G
Sbjct: 155 FFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITG 214
Query: 88 TGKTATFCSGILQQLDYG---LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 144
+GKTA F L++L + + + L+L PTRELA QI +++ L + +K VG
Sbjct: 215 SGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVG 274
Query: 145 GTSVREDQRILQAGVHTVVGTPGRVFDMLRRQ-SLRPDSIKMFVLDEADEMLSRGFKDQI 203
G SVRE + +L++ VV TPGR+ D LR S+ D + + +LDEAD +L GF +I
Sbjct: 275 GLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEI 334
Query: 204 YDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEK- 262
++ +L P + Q +FSATM E E+ + +NKP+R+ G+ + V + +
Sbjct: 335 TELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRT 394
Query: 263 -EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDII 321
E + L L ++ +IF T++ L + HG++ Q R
Sbjct: 395 REANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDS 454
Query: 322 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAIN 381
+ FR LI TD+ ARG+D+ V VINY P + ++Y+HR+GR+ R GR+G A+
Sbjct: 455 LELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVT 514
Query: 382 FVTLDDSRMLSDIQK 396
FVT D +L I K
Sbjct: 515 FVTDSDRSLLKVIAK 529
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 201/395 (50%), Gaps = 22/395 (5%)
Query: 36 DEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFC-KGLDVIQQAQSGTGKTATF 94
+EV +F +G++E L++ G++ PS IQ + PF +G DVI AQ+G+GKT F
Sbjct: 5 NEVVKTFAELGVREELVKACERLGWKNPSKIQAEAL-PFALEGKDVIGLAQTGSGKTGAF 63
Query: 95 CSGILQQL---------------DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKV 139
ILQ L D C VL+PTRELA QI + ALG + ++
Sbjct: 64 AIPILQALLEYVYDSEPKKGRRPDPAFFAC---VLSPTRELAIQIAEQFEALGADISLRC 120
Query: 140 HACVGGTSVREDQRILQAGVHTVVGTPGRVFD-MLRRQSLRPDSIKMFVLDEADEMLSRG 198
VGG + L H +V TPGR++D M + S+K VLDEAD +L+
Sbjct: 121 AVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNED 180
Query: 199 FKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYV 258
F+ + I + +P + + +FSATM + ++ R + PV+I T++ +KQ Y
Sbjct: 181 FEKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYR 240
Query: 259 NVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTR 318
V + +K L + + + S+IF T +L +RS G M Q+ R
Sbjct: 241 FVAAK-YKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKR 299
Query: 319 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGV 378
+ +F++G +L+ TD+ +RG+D+ V +VINYD+PT ++Y+HR+GR+ R GR GV
Sbjct: 300 LGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGV 359
Query: 379 AINFVTLDDSRMLSDIQKFYNVTVEELPSNVADLL 413
I+ V + I+K + E P+ ++L
Sbjct: 360 GISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVL 394
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 189/364 (51%), Gaps = 11/364 (3%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F+ +GL E + G +P+ +Q + G DV+ AQ+G+GKTA F IL
Sbjct: 59 NFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILH 118
Query: 101 QL---DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA 157
+L YG+ ALV+ PTRELA Q+ + +ALG L ++ VGG + L +
Sbjct: 119 RLAEDPYGVF---ALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVS 175
Query: 158 GVHTVVGTPGRVFDMLRRQSLRP---DSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKI 214
H V+ TPGR+ +L P K VLDEAD +L GF+D++ IFQ LP
Sbjct: 176 RPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSR 235
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKE--EWKLETLCD 272
Q +FSATM + NK T++ + Q ++ +K+ E L +
Sbjct: 236 QTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILS 295
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRV 332
E I ++IFV+T R L+ + + A H Q+ R + +F+SG +
Sbjct: 296 QMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPI 355
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLS 392
L+ TD+ +RG+D+ V LVINYD+P P +Y+HR+GR+ R GR G+A++ +T D +++
Sbjct: 356 LLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIH 415
Query: 393 DIQK 396
I++
Sbjct: 416 KIEE 419
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 204/388 (52%), Gaps = 19/388 (4%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL- 99
+F M LLR + G P+ IQ +G+ G D+I A +G+GKT F ++
Sbjct: 98 NFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMII 157
Query: 100 ----QQLDYGLVQCQ---ALVLAPTRELAQQ----IEKVMRALGD--YLGVKVHACVGGT 146
+++ + + ALV+ P+RELA+Q +E+ + +L + Y ++ C+GG
Sbjct: 158 LALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGV 217
Query: 147 SVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDI 206
+R +++ GVH VV TPGR+ D+L ++ + D+ ++ LDEAD ++ GF+D I +
Sbjct: 218 DMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHV 277
Query: 207 FQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNVEKEEW 265
F + Q +FSATMP + + KPV + V R L+ I++ V K+E
Sbjct: 278 FDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQE--VEYVKQEA 335
Query: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREF 325
K+ L + + +IF + VD + + + A HG DQ RD + F
Sbjct: 336 KIVYLLECLQK-TTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLF 394
Query: 326 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTL 385
++G VL+ TD+ ++G+D + VINYD+P + ENY+HRIGR+GR G+ G+A F+
Sbjct: 395 KAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINK 454
Query: 386 DDSRM-LSDIQKFYNVTVEELPSNVADL 412
+ S + L D++ + +P +A+L
Sbjct: 455 NQSEITLLDLKHLLQEAKQRIPPVLAEL 482
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 195/383 (50%), Gaps = 13/383 (3%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F + GL LL + G++ P+ IQ + I G ++ A +G+GKTA+F I+
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 101 QLDYGLVQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 152
+ + A+VLAPTREL Q+E + LG L K VGG +
Sbjct: 171 RCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 153 RILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPG 212
+Q GV ++GTPGRV D+L + ++ D+I FVLDE D ML RGF+DQ+ IFQ L
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-S 289
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCD 272
+ QV +FSAT+ E ++ + + + + + + Q + V+ ++ K + L D
Sbjct: 290 QPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKK-QKLFD 348
Query: 273 LYETLA--ITQSVIFVNTRRKVDWLTDKMRSNDHTVS-ATHGDMDQNTRDIIMREFRSGS 329
+ + +V++V++R D L + + + + HG+ R +M F G
Sbjct: 349 ILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGE 408
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSR 389
VL++T +L RG+D+ V VI +D+P+ + Y+H IGR+ R G KG AI FV DD
Sbjct: 409 VPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRN 468
Query: 390 MLSDIQKFYNVTVEELPSNVADL 412
+ D+ + +P + +L
Sbjct: 469 LFPDLVAALKSSGAAIPKELINL 491
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 195/383 (50%), Gaps = 13/383 (3%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F + GL LL + G++ P+ IQ + I G ++ A +G+GKTA+F I+
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 101 QLDYGLVQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 152
+ + A+VLAPTREL Q+E + LG L K VGG +
Sbjct: 171 RCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 153 RILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPG 212
+Q GV ++GTPGRV D+L + ++ D+I FVLDE D ML RGF+DQ+ IFQ L
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-S 289
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCD 272
+ QV +FSAT+ E ++ + + + + + + Q + V+ ++ K + L D
Sbjct: 290 QPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKK-QKLFD 348
Query: 273 LYETLA--ITQSVIFVNTRRKVDWLTDKMRSNDHTVS-ATHGDMDQNTRDIIMREFRSGS 329
+ + +V++V++R D L + + + + HG+ R +M F G
Sbjct: 349 ILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGE 408
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSR 389
VL++T +L RG+D+ V VI +D+P+ + Y+H IGR+ R G KG AI FV DD
Sbjct: 409 VPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRN 468
Query: 390 MLSDIQKFYNVTVEELPSNVADL 412
+ D+ + +P + +L
Sbjct: 469 LFPDLVAALKSSGAAIPKELINL 491
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 189/369 (51%), Gaps = 13/369 (3%)
Query: 53 RGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL----DYGLVQ 108
R +Y+ GF PS IQ + + D++ A++G+GKT + L + +
Sbjct: 242 RMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMG 301
Query: 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGR 168
LVL+PTRELA QI+ G + GG + ++ GV VV TPGR
Sbjct: 302 PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGR 361
Query: 169 VFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEAL 228
+ D+L + + + VLDEAD ML GF+ QI I +P K Q +++AT P E
Sbjct: 362 LNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVR 421
Query: 229 EITRKFMNKPVRILVKR-DEL----TLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 283
+I + P ++ + DEL ++ + +EK +LE + E ++ +
Sbjct: 422 KIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHS-RLEQILRSQEPG--SKII 478
Query: 284 IFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 343
IF +T+R D L + + +A HGD Q RD ++ +FRSG + VL+ TD+ ARG+
Sbjct: 479 IFCSTKRMCDQLARNL-TRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGL 537
Query: 344 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVE 403
DV+ + +V+NYD P E+Y+HRIGR+GR G G+A F D++ SD+ K +
Sbjct: 538 DVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQ 597
Query: 404 ELPSNVADL 412
++P V ++
Sbjct: 598 KVPPQVREM 606
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 207/417 (49%), Gaps = 21/417 (5%)
Query: 14 RQYDAKMSDLLSSDGQDFFTSYD--EVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGI 71
R+ +K DL+ D +F M +L + G +P+ IQ +G+
Sbjct: 118 RKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGL 177
Query: 72 VPFCKGLDVIQQAQSGTGKTATFC-SGILQQLDYGLVQCQA-------LVLAPTRELAQQ 123
G D+I A +G+GKT F I+ L ++ A L++ P+RELA+Q
Sbjct: 178 PVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQ 237
Query: 124 IEKVMRAL------GDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQS 177
+V+ Y ++ C+GG +R +++ GVH VV TPGR+ DML ++
Sbjct: 238 TYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKK 297
Query: 178 LRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNK 237
+ D+ + LDEAD ++ GF+D I ++F + Q +FSATMP + R + K
Sbjct: 298 MSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVK 357
Query: 238 PVRILVKR-DELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLT 296
PV + V R L+ I++ V K+E K+ L + + + +IF + VD +
Sbjct: 358 PVTVNVGRAGAANLDVIQE--VEYVKQEAKIVYLLECLQKTS-PPVLIFCENKADVDDIH 414
Query: 297 DKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDL 356
+ + A HG DQ R+ + F++G VL+ TD+ ++G+D + VINYD+
Sbjct: 415 EYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDM 474
Query: 357 PTQPENYLHRIGRSGRFGRKGVAINFVTLDDSR-MLSDIQKFYNVTVEELPSNVADL 412
P + ENY+HRIGR+GR G+ G+A F+ + S L D++ + +P +A+L
Sbjct: 475 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 531
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 190/375 (50%), Gaps = 43/375 (11%)
Query: 46 GLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-DY 104
GL +L + +E+P IQ + + G D I A++G+GKT F +L+ + D
Sbjct: 402 GLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 461
Query: 105 GLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 160
V+ LV+APTREL QQI +R LG+ GG+ V + L+ G
Sbjct: 462 PPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTE 521
Query: 161 TVVGTPGRVFDMLRRQSLRPDSIK---MFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
VV TPGR+ D+L S + +++ V+DEAD M GF+ QI I Q + Q
Sbjct: 522 IVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTV 581
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFY-VNVEKEEWK--LETLCDLY 274
+FSAT P + + RK +NKPV I V + + I Q + E E + LE L + Y
Sbjct: 582 LFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESERFSRLLELLGEWY 641
Query: 275 ETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 334
E + ++FV RS + ++S +F+S +LI
Sbjct: 642 EKGKV---LVFV-------------RSQEKSIS----------------DFKSDVCNLLI 669
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDI 394
T + ARG+DV+++ LV+N+D P E+Y+HR+GR+GR GRKG A+ F++ DD++ D+
Sbjct: 670 ATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDL 729
Query: 395 QKFYNVTVEELPSNV 409
K ++ + +P +V
Sbjct: 730 VKALELSEQPVPDDV 744
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 182/357 (50%), Gaps = 15/357 (4%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGIL 99
+F L EN+L FE+PS IQ G D+I A++G+GKT F I+
Sbjct: 117 TFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIM 174
Query: 100 QQLDYGL--------VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 151
L V LVL+PTRELA QI V+R G+ G+K GG+S
Sbjct: 175 HVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQ 234
Query: 152 QRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLP 211
+++GV V+GTPGR+ D++ LR + VLDEAD ML GF++ + I
Sbjct: 235 ISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTN 294
Query: 212 GKIQVGVFSATMPPEALEITRKFMN-KPVRILVKRDELTLEGIKQFYVNVEKEEWKLETL 270
Q+ +FSAT P + ++ ++FM+ P+++++ +L + V E + + L
Sbjct: 295 KVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRL 354
Query: 271 CDLYETLAITQS---VIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRS 327
L E +Q ++F + + + L ++ + HG+ Q+ R + F+
Sbjct: 355 IALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKE 414
Query: 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT 384
GS +L+ TD+ ARG+D+ V +VINY P E+Y+HRIGR+GR G+KGVA F T
Sbjct: 415 GSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFT 471
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 194/376 (51%), Gaps = 10/376 (2%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+FD++ L E I GF+ + IQ I P +G DV+ A++G+GKT F ++
Sbjct: 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149
Query: 101 QLDYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
L + +V+ PTRELA Q + V L + V +GG + R + + +
Sbjct: 150 LLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIA 209
Query: 157 AGVHTVVGTPGRVFDMLRR-QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQ 215
+G + V+ TPGR+ D L+ ++ +K V+DEAD +L F++ + I ++LP Q
Sbjct: 210 SGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQ 269
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVK--RDELTLEGIKQFYVNVEKEEWKLETLCDL 273
+FSAT + ++ R + PV + V R ++T EG++Q Y V ++ + + L
Sbjct: 270 TALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFL 329
Query: 274 YETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 333
+ L + ++F +T + V + T+ M+ +D VS HG MDQN R +F +L
Sbjct: 330 KKNLN-KKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGIL 388
Query: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRF-GRKGVAINFVTLDDSRMLS 392
+ TD+ ARG+D+ V +I YD P +P Y+HR+GR+ R G KG A+ V + +
Sbjct: 389 LCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKAL-LVLIPEELQFI 447
Query: 393 DIQKFYNVTVEELPSN 408
K V V+EL N
Sbjct: 448 RYLKAAKVPVKELEFN 463
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 178/359 (49%), Gaps = 31/359 (8%)
Query: 79 DVIQQAQSGTGKTATFCSGIL---QQLDYGLVQCQ-----ALVLAPTRELAQQIEKVMRA 130
DVI + +G+GKTA F +L +L + Q ALV+ PTRELA QIE+
Sbjct: 241 DVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVK 300
Query: 131 LGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDE 190
YLG K + G S+ + L G V+ TPGR+ D L R+ + + VLDE
Sbjct: 301 FSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDE 360
Query: 191 ADEMLSRGFKDQIYDIFQLLPGKI-----------------QVGVFSATMPPEALEITRK 233
AD M+ F+ Q+ ++ ++P +FSATM + RK
Sbjct: 361 ADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARK 420
Query: 234 FMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS-VIFVNTRRKV 292
F+ PV + + T + I Q V + KE K L L + L ++ ++FVNTR KV
Sbjct: 421 FLRNPVVVTIGE---TTKFITQ-QVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKV 476
Query: 293 DWLTDKMRSNDHT-VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 351
D++ + V+ H Q RD + EF+ VL+TTD+L RG+D+ ++ V
Sbjct: 477 DYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQV 536
Query: 352 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELPSNVA 410
INYD+P + Y HRIGR+GR G+ GVA F+TL+D + +++ N +P +A
Sbjct: 537 INYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNECNSLVPPELA 595
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 181/370 (48%), Gaps = 6/370 (1%)
Query: 46 GLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG 105
G + +LR + GF+ P+ IQ++ I G + A +G+GKT F +L +L
Sbjct: 147 GCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRP 206
Query: 106 LVQ-CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVG 164
+A++L+P RELA Q + + L G H + + + + ++
Sbjct: 207 STDGIRAVILSPARELAAQTAREGKKL--IKGSNFHIRLMTKPLVKTADFSKLWCDVLIS 264
Query: 165 TPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLL--PGKIQVGVFSAT 222
TP R+ ++ + + ++ VLDE+D++ + QI + + P I+ +FSAT
Sbjct: 265 TPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIR-SLFSAT 323
Query: 223 MPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 282
+P E+ R M+ VR+++ R E +KQ V EE KL L +
Sbjct: 324 LPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPV 383
Query: 283 VIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
+IFV ++ + L D+++ + H D+ R+ + +FR+G VLI TD++ARG
Sbjct: 384 LIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARG 443
Query: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTV 402
+D + ++ VINYD P Y+HRIGRSGR GR G AI F T D L +I +
Sbjct: 444 MDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSG 503
Query: 403 EELPSNVADL 412
E+PS + L
Sbjct: 504 CEVPSWIMSL 513
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 179/347 (51%), Gaps = 13/347 (3%)
Query: 77 GLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ--------ALVLAPTRELAQQIEKVM 128
G ++ A +G+GKTA+F I+ + + A+VLAPTREL Q+E
Sbjct: 10 GKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQA 69
Query: 129 RALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVL 188
+ LG L K VGG + +Q GV ++GTPGRV D+L + ++ D+I FVL
Sbjct: 70 KMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVL 129
Query: 189 DEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDEL 248
DE D ML RGF+DQ+ IFQ L + QV +FSAT+ E ++ + + + +
Sbjct: 130 DEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNK 188
Query: 249 TLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ--SVIFVNTRRKVDWLTDKMRSNDHTV 306
+ + Q + V+ ++ K + L D+ + + +V++V++R D L + +
Sbjct: 189 PNKAVNQLAIWVDAKQKK-QKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVK 247
Query: 307 S-ATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 365
+ + HG+ R +M F G VL++T +L RG+D+ V VI +D+P+ + Y+H
Sbjct: 248 ALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIH 307
Query: 366 RIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELPSNVADL 412
IGR+ R G KG AI FV DD + D+ + +P + +L
Sbjct: 308 VIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINL 354
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 184/372 (49%), Gaps = 9/372 (2%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF---CSG 97
+F+++ L +N + I GF R + IQ + I P G DV+ A++G+GKT F
Sbjct: 155 TFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVE 214
Query: 98 ILQQLDYGLVQCQA-LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
+L ++ + LV+ PTRELA Q V + L Y V +GG + + IL
Sbjct: 215 LLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILA 274
Query: 157 AGVHTVVGTPGRVFDMLRRQS-LRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQ 215
GV+ +V TPGR+ D L + ++K V+DEAD +L + F++ + I LLP Q
Sbjct: 275 KGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQ 334
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVK--RDELTLEGIKQFYVNVEKEEWKLETLCDL 273
+FSAT + ++ R + PV I V R E+T EG++Q Y V L L L
Sbjct: 335 TSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFL 394
Query: 274 YETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 333
+ ++F +T + + + R G +DQN R +F + +L
Sbjct: 395 KRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGIL 454
Query: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGR-FGRKGVAINFVTLDDSRMLS 392
+ T++ ARG+D V ++ YD P P +Y+HR+GR+ R G KG A+ +T + + +
Sbjct: 455 LCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELKFIQ 514
Query: 393 DIQKFYNVTVEE 404
+ K + VEE
Sbjct: 515 YL-KAAKIPVEE 525
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 193/401 (48%), Gaps = 62/401 (15%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF+ +GL ++LL + GF P+ +Q + KG D + Q+ +G+GKT + IL
Sbjct: 111 SFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILS 170
Query: 101 QL-------------DYGLVQCQALVLAPTRELAQQI-EKVMRALGDYLGVKVHACVGGT 146
++ + + QA+++AP+REL QI +V + LG V VGG
Sbjct: 171 EIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGA 230
Query: 147 S-VREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYD 205
+ +R+++ + + VVGTPGR+ ++ + L + VLDE DE+LS F++ I+
Sbjct: 231 NRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHR 290
Query: 206 IFQLLPGKIQVG--------------VFSATMPPEALEITRKFMNKPVRILVKRDELT-- 249
I + + + G + SAT+P + + + ++PV LV+ +++T
Sbjct: 291 ILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPV--LVQANKVTPL 348
Query: 250 -----------------------------LEGIKQFYVNVEKEEWKLETLCDLYETLAIT 280
L + Y + K + K++TL L
Sbjct: 349 DTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQ 408
Query: 281 QSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 340
+ F+N R++ + K+ + + HGD+ + R ++++F++G +VL+T +L A
Sbjct: 409 SVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSA 468
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAIN 381
RG+DV + LV+N +LPT +Y HR GR+GR GRKG +
Sbjct: 469 RGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVT 509
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 188/376 (50%), Gaps = 28/376 (7%)
Query: 55 IYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ---- 110
+ A G E IQ G D++ +A++G GKT F IL+ L G + +
Sbjct: 111 LKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMG 170
Query: 111 ------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVG 164
LVL PTRELA+Q+ A G LG+ GG S + L+ GV VVG
Sbjct: 171 YGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIVVG 230
Query: 165 TPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLL--PGKIQVGVFSAT 222
TPGR+ D + RQ+L ++ VLDEADEML GF + + I + K+Q +FSAT
Sbjct: 231 TPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLLFSAT 290
Query: 223 MPPEALEITRKFMNKPVRI--LVKRDELTL-EGIKQFYVNVEKEEWK--LETLCDLYETL 277
+P I+ +F+ + + LV D++ ++ + K + + Y +
Sbjct: 291 LPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIISCYSSG 350
Query: 278 AITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 337
Q++IF T+ +V L+ + + A HG++ Q+ R++ + FR+G L+ T+
Sbjct: 351 G--QTIIFAETKVQVSELSGLLDGS----RALHGEIPQSQREVTLAGFRNGKFATLVATN 404
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRM--LSDIQ 395
+ ARG+D+ V L+I + P + E Y+HR GR+GR G GVA VTL DSR +S I+
Sbjct: 405 VAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVA---VTLYDSRKSSVSRIE 461
Query: 396 KFYNVTVEELPSNVAD 411
K + E L + D
Sbjct: 462 KEAGIKFEHLAAPQPD 477
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 155/311 (49%), Gaps = 12/311 (3%)
Query: 42 FDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F +N+L I GF P+ IQ +G KG D+I A++G+GKT + L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 102 L--------DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 153
+ D G + L+LAPTRELA QI++ R G GV+ GG R
Sbjct: 227 VSAQPRLGQDDGPI---VLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIR 283
Query: 154 ILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGK 213
L+ GV V+ TPGR+ DML Q + VLDEAD ML GF+ QI I +
Sbjct: 284 DLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPD 343
Query: 214 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL-EGIKQFYVNVEKEEWKLETLCD 272
Q ++SAT P E + R+F+ P + ++ +L + I Q V E L
Sbjct: 344 RQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTL 403
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRV 332
L + + ++ +IFV T+R D +T ++R + A HGD Q+ RD ++ EF+SG S +
Sbjct: 404 LKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPI 463
Query: 333 LITTDLLARGI 343
+ TD+ ARG+
Sbjct: 464 MTATDVAARGL 474
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 178/361 (49%), Gaps = 25/361 (6%)
Query: 47 LQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 106
L +++ + FE + +Q I C DV A +G+GKT F +++ L
Sbjct: 23 LSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRST 82
Query: 107 V------QCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQA-G 158
Q ++++PTREL+ QI V + L V VGG V+ D +I++ G
Sbjct: 83 SFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEG 142
Query: 159 VHTVVGTPGRVFDMLRR-QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
+ ++GTPGR+ D++ R + L ++++ +LDEAD +L GF+ Q+ I LP + + G
Sbjct: 143 CNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTG 202
Query: 218 VFSATMPPEALEITRKFMNKPVRILVK-----------RDELTLEGIKQFYVNVEKEEWK 266
+FSAT E+ + + PVR+ V+ + T G+ Y+ E ++ K
Sbjct: 203 LFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADK-K 261
Query: 267 LETLCDLYETLAITQSVIFVNTRRKVDW----LTDKMRSNDHTVSATHGDMDQNTRDIIM 322
L DL + + ++F T VD+ L+ ++ HGDM QN RD +
Sbjct: 262 SSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKAL 321
Query: 323 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF 382
F SS L+ TD+ ARG+D+ + V+ YD P P + HR GR+ R GR+G AI F
Sbjct: 322 ASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVF 381
Query: 383 V 383
+
Sbjct: 382 L 382
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 176/352 (50%), Gaps = 16/352 (4%)
Query: 47 LQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 106
L E+++ + GFE + +Q I C DV+ A +G+GKT F ++ +
Sbjct: 23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 82
Query: 107 V------QCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQA-G 158
Q ++++PTREL+ QI KV L V VGG V D L+ G
Sbjct: 83 SYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEG 142
Query: 159 VHTVVGTPGRVFDMLRR-QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
+ ++GTPGR+ DM++R + L ++++ +LDEAD +L GF+ Q+ I LP + + G
Sbjct: 143 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 202
Query: 218 VFSATMPPEALEITRKFMNKPVRIL--VKRDELTLEGIKQFYVNVEKEEWKLETLCDLYE 275
+FSAT ++ + + + ++ + T G+ Y+ E ++ K L L
Sbjct: 203 LFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQ-KSSQLVHLLI 261
Query: 276 TLAITQSVIFVNTRRKVDW----LTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSR 331
+ V+F T VD+ L+ + +THG MDQ RD + F SS
Sbjct: 262 ENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASSG 321
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 383
VL+ TD+ ARG+D+ + V+ YD P P+ ++HR+GR+ R R+G AI F+
Sbjct: 322 VLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFL 373
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 180/393 (45%), Gaps = 36/393 (9%)
Query: 42 FDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
FD L L+ I G+E + +Q+ + KG DV+ +A++GTGKT F ++
Sbjct: 322 FDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEV 381
Query: 102 L--------DYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQ 152
+ D ALV+ PTRELA Q L Y + V +GGT + +Q
Sbjct: 382 VVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQ 441
Query: 153 RILQAG-VHTVVGTPGRVFDMLRRQ---SLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQ 208
+ +Q +V TPGR+ D + + R +K+ VLDEAD +L GF+ I I
Sbjct: 442 KRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIIS 501
Query: 209 LLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLE 268
+P + Q +FSAT+P E +I + ++RD + + + + ++ ++
Sbjct: 502 AVPKERQTFLFSATVPEEVRQI--------CLVALRRDHEFVNCVHEGTIETHQQVRQMH 553
Query: 269 TLCDLYETLAITQS--------------VIFVNTRRKVDWLTDKMRSNDHTVSATHGDMD 314
+ L ++ + ++F T + D + + V H
Sbjct: 554 MIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKP 613
Query: 315 QNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFG 374
Q+ R + EFR +L+T+D+ ARG+D V+LV+ LP E Y+HR+GR+GR G
Sbjct: 614 QSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKG 673
Query: 375 RKGVAINFVTLDDSRMLSDIQKFYNVTVEELPS 407
++G I + + LS ++ +T LPS
Sbjct: 674 KEGEGILLLAPWEEYFLSSLKDL-PITKSPLPS 705
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 186/394 (47%), Gaps = 47/394 (11%)
Query: 42 FDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
FD L L+ I GFE + +Q+ + +G DV+ +A++GTGKT F ++
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 102 L--------DYGLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQ 152
+ D LV+ PTRELA Q L Y + V +GGT + +Q
Sbjct: 444 VIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQ 503
Query: 153 RILQAG-VHTVVGTPGRVFDMLRRQS---LRPDSIKMFVLDEADEMLSRGFKDQIYDIFQ 208
R +Q +V TPGR+ D + S R +K+ VLDEAD +L GF+ I I
Sbjct: 504 RRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIA 563
Query: 209 LLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDEL-----------TLEGIKQFY 257
+P + Q +FSAT+P E +I + +KRD T + + Q Y
Sbjct: 564 AVPKQRQTFLFSATVPEEVRQI--------CHVALKRDHEFINCVQEGSGETHQKVTQMY 615
Query: 258 V--NVEKEEWKLETLCDLYETLAIT---QSVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
+ ++++ L L L E +A + +IF T + D + V H
Sbjct: 616 MIASLDRHFSLLHVL--LKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSR 673
Query: 313 MDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGR 372
Q+ R + EFR + +L+T+D+ ARG+D VSLV+ LP+ E Y+HR+GR+GR
Sbjct: 674 KPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGR 733
Query: 373 FGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELP 406
G++G + +L+ ++++ +V++LP
Sbjct: 734 KGKEGEGV--------LLLAPWEEYFMSSVKDLP 759
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 197/404 (48%), Gaps = 43/404 (10%)
Query: 35 YDEVYDS--FDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
+D +Y + FD + L+ + A G + + +Q + G D + +A++GTGK+
Sbjct: 368 HDSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSM 427
Query: 93 TF----CSGILQQLDYG-----LVQCQALVLAPTRELAQQIEKVMRAL-GDYLGVKVHAC 142
F +L+ ++ G + L+L PTRELA QI +AL ++ G+ V
Sbjct: 428 AFLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTL 487
Query: 143 VGGTSVREDQRILQA-GVHTVVGTPGRVFDMLRRQS---LRPDSIKMFVLDEADEMLSRG 198
+GGT R DQ+ L++ ++ TPGR+ D + +S R ++K+F++DEAD +L G
Sbjct: 488 IGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLG 547
Query: 199 FKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDEL---------- 248
FK + I LP + Q +FSAT+P E +++ +++KRD
Sbjct: 548 FKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQ--------LVLKRDHSYIDTIGLGCV 599
Query: 249 -TLEGIKQFYVNVEKEEWKLETLCDLYE----TLAITQSVIFVNTRRKVDWLTDKMRSND 303
T + +KQ + V E + L + + + ++F +T + +R
Sbjct: 600 ETHDKVKQSCI-VAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMK 658
Query: 304 HTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENY 363
V H Q R + EF+ + +L+T+D+ ARG++ V+LVI +P+ E Y
Sbjct: 659 LNVREIHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQY 718
Query: 364 LHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELPS 407
+HR+GR+GR G+ G + + + L +++ ++ +E +P+
Sbjct: 719 IHRLGRTGREGKGGKGLLLIAPWERYFLDELK---DLPLEPIPA 759
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 186/398 (46%), Gaps = 43/398 (10%)
Query: 42 FDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
FD L L+GI GF+ + +Q+ + +G D++ +A++GTGKT F ++
Sbjct: 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141
Query: 102 L--------DYGLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQ 152
+ D LV+ PTRELA Q L Y + V +GGT + +Q
Sbjct: 142 VIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQ 201
Query: 153 RILQ-AGVHTVVGTPGRVFDMLRRQS---LRPDSIKMFVLDEADEMLSRGFKDQIYDIFQ 208
R LQ + +V TPGR+ D + S R +K+ VLDEAD +L GF+ +I I
Sbjct: 202 RRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIA 261
Query: 209 LLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLE 268
+P + Q +FSAT+ E +I + +KRD + +++ ++ ++
Sbjct: 262 AVPKQRQTFLFSATVSDEVRQI--------CHVALKRDHEFVNCVQEGAGETHQKVSQMY 313
Query: 269 TLCDLYETLAIT--------------QSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMD 314
+ L ++ + +IF T + D + V H
Sbjct: 314 MIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKP 373
Query: 315 QNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFG 374
Q+ R + EFR S +L+T+D+ ARG+D VSLV+ LP+ E Y+HR+GR+GR G
Sbjct: 374 QSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKG 433
Query: 375 RKGVAINFVTLDDSRMLSDIQKFYNVTVEELPSNVADL 412
++G + +L+ ++++ +V++LP + L
Sbjct: 434 KEGEGV--------LLLAPWEEYFLSSVKDLPITKSSL 463
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 196/403 (48%), Gaps = 41/403 (10%)
Query: 35 YDEVYDS--FDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
+D +Y + FD + L+ + A G + + +Q + G D + +A++GTGK+
Sbjct: 321 HDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSM 380
Query: 93 TF----CSGILQQLDYG-----LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHAC 142
F +L+ ++ G + AL+L PTRELA QI +AL + G+ V
Sbjct: 381 AFLLPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTL 440
Query: 143 VGGTSVREDQRILQA-GVHTVVGTPGRVFDMLRRQS---LRPDSIKMFVLDEADEMLSRG 198
+GGT + DQ+ L++ ++ TPGR+ D + +S R ++K+F++DEAD +L G
Sbjct: 441 IGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLG 500
Query: 199 FKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDEL---------- 248
F+ + I LP + Q +FSAT+P E ++ ++++KRD
Sbjct: 501 FRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVS--------QLVLKRDHSYIDTIGLGCV 552
Query: 249 -TLEGIKQFYVNVEKEEWKLETLCDLYETLAIT---QSVIFVNTRRKVDWLTDKMRSNDH 304
T + ++Q + E L E + T + ++F +T + +R
Sbjct: 553 ETHDKVRQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKL 612
Query: 305 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYL 364
V H Q R + EF+ + +L+T+D+ ARG++ V+LVI +P+ E Y+
Sbjct: 613 NVREIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYI 672
Query: 365 HRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELPS 407
HR+GR+GR G+ G + + + L +++ ++ +E +P+
Sbjct: 673 HRLGRTGREGKGGEGLLLIAPWERYFLDELK---DLPLEPIPA 712
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 196/413 (47%), Gaps = 61/413 (14%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF+ +GL L+R + G E+P+ IQQ I +G DV+ +A++G+GKT + +LQ
Sbjct: 47 SFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQ 106
Query: 101 QL------DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQR 153
+L + A +L P+REL QQ+ + +L + V++ A +S+ D R
Sbjct: 107 KLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMR 166
Query: 154 ILQAGVHTV-VGTPGRVFDMLRRQSLRP----DSIKMFVLDEADEMLSRGFKDQIYDIFQ 208
AG+ + V TP + L P +S+ + VLDEAD +LS G++D + +
Sbjct: 167 NALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTS 226
Query: 209 LLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD----ELTLEGIKQFYVNVEKEE 264
++P + Q + SAT + ++ + ++ P+ + + D E ++QF+++ ++
Sbjct: 227 IIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQD 286
Query: 265 WKLETLCDLYETLAITQSVIFVNT-----RRKVDWLTDKMRSNDHTVSATHGDMDQNTRD 319
L L L + + +IF+NT R K+ ++S + +G++ QN+R
Sbjct: 287 KLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKS-----AILNGELPQNSRL 341
Query: 320 IIMREFRSGSSRVLITTD-----------------------------------LLARGID 344
I+ +F +G LI TD + RGID
Sbjct: 342 HILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGID 401
Query: 345 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKF 397
++V VIN+D+P Y+HRIGR+GR G +++ ++ D+ DI+ F
Sbjct: 402 FKKVHTVINFDMPQSVTGYIHRIGRTGRAYSSGSSVSLISPDEMEGFEDIKSF 454
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 120/226 (53%), Gaps = 14/226 (6%)
Query: 47 LQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 106
L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ++
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 107 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HTVVG 164
Q ALVL TRELA QI YL KV GG +++ + +L+ H VVG
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVG 172
Query: 165 TPGRVFDMLRRQSLRPDSIKMFVLDEADEML-SRGFKDQIYDIFQLLPGKIQVGVFSATM 223
TPGRV + R + L +++ F+LDE D+ML S + + +IF++ P QV +FSAT+
Sbjct: 173 TPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
Query: 224 PPEALEITRKFMNKPVRILVKRDELTLE--GIKQFYVNVEKEEWKL 267
E + +KFM +D L E ++ F VE EW+L
Sbjct: 233 SKEIRPVCKKFM---------QDFLENETVSVRLFSFGVENSEWRL 269
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 238 PVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLT 296
P+ I V + +LTL G+ Q Y+ + + E K L DL + L Q VIFV + + L
Sbjct: 306 PMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELN 364
Query: 297 DKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDL 356
+ + H M Q R + F+ G R+L+ TDL+ RGID+++V++VINYD+
Sbjct: 365 KLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDM 424
Query: 357 PTQPENYLHRIGRSGRFGRKGVAINFV-TLDDSRMLSDIQKFYNVTVEELPSNV 409
P + YLHR+GR+GRFG KG+AI FV + DS +L+ +Q+ + V ++ELP +
Sbjct: 425 PDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 478
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 194/439 (44%), Gaps = 87/439 (19%)
Query: 39 YDSFDAMGLQENLLRGIYAYGFERPSAIQQRGI-VPFCKGLDVIQQAQSGTGKTATFCSG 97
+ ++ +M L L++ IY F+ P+ IQ+ V +G DVI A++G+GKT F
Sbjct: 189 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 248
Query: 98 ILQQLD---------YGLV-----------QCQALVLAPTRELAQQIEKVMRALGDYLGV 137
ILQ+L Y L +AL++ PTRELA Q+ + + L V
Sbjct: 249 ILQRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSV 308
Query: 138 KVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDML---RRQSLRPDSIKMFVLDEADEM 194
KV VGG + +R L+ VV TPGR+++++ + + S+ FVLDEAD M
Sbjct: 309 KVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRM 368
Query: 195 LSRGFKDQIYDIFQLLP------------------------GKIQVGVFSATMP------ 224
+ RG ++ I LLP K Q VFSAT+
Sbjct: 369 VERGHFRELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFR 428
Query: 225 -----------------PEALEI--TRKFMNKPVRIL-VKRDELTLEGIKQFYVNVEKEE 264
++E+ R M V I+ + + I++ ++ E++E
Sbjct: 429 KKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKE 488
Query: 265 WKLETLCDLYETLAIT---QSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDII 321
LY L++ ++++F + + ++ ++ V +M Q R
Sbjct: 489 KD----AYLYYILSVHGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKS 544
Query: 322 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAIN 381
+ FR+ + +LI TDL+ARGID++ V +I+Y LP E Y+HR GR+ R G +I
Sbjct: 545 IDRFRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIA 604
Query: 382 FVTLDDSRMLSDIQKFYNV 400
+ +++ KFY +
Sbjct: 605 LIEPNET------SKFYTL 617
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 190/392 (48%), Gaps = 31/392 (7%)
Query: 25 SSDGQD--FFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQ 82
S DG++ F+ Y V F + + + RG+ + + +Q I G D++
Sbjct: 55 SEDGKNGTVFSRYAGVR-KFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILG 113
Query: 83 QAQSGTGKTATFCSGILQQLDYGL------VQCQALVLAPTRELAQQIEKVMRALGDYLG 136
A++G+GKT F IL++L V C ++++PTRELA Q V+ +G +
Sbjct: 114 AARTGSGKTLAFVIPILEKLHRERWSPEDGVGC--IIISPTRELAAQTFGVLNKVGKFHK 171
Query: 137 VKVHACVGGTSVREDQRILQAGVH---TVVGTPGRVFD-MLRRQSLRPDSIKMFVLDEAD 192
+GG RE + + VH +V PGR+ M + +++ +LDEAD
Sbjct: 172 FSAGLLIGG---REGVDVEKERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEAD 228
Query: 193 EMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEG 252
+L FK Q+ I LP Q +FSAT + ++ R + P I V + +T
Sbjct: 229 RVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATP 288
Query: 253 IKQ----FYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTD---KMRSNDHT 305
V VEK KL+ L +T ++ ++F++T+++V ++ + K+R
Sbjct: 289 TSLMQTVMIVPVEK---KLDMLWSFIKTHLNSRILVFLSTKKQVKFVHEAFNKLRPG-IP 344
Query: 306 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV-QQVSLVINYDLPTQPENYL 364
+ + HG M Q R + +F S VL TD+LARG+D + V V+ D P +Y+
Sbjct: 345 LKSLHGKMSQEKRMGVYSQFIERQS-VLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYI 403
Query: 365 HRIGRSGRFGRKGVAINFVTLDDSRMLSDIQK 396
HR+GR+ RF +G ++ F+T + +M+ +Q+
Sbjct: 404 HRVGRTARFYTQGKSLLFLTPSEEKMIEKLQE 435
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 53/398 (13%)
Query: 49 ENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQ 108
E++L + GF P+ IQ+ + G D I AQ+G+GKT T+ I ++
Sbjct: 85 EHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQRSS 144
Query: 109 CQALVLAPTRELAQQIEKVMRALG-----DYLGVKVHACVGGTSVREDQRILQAGVHTV- 162
QA+++ PTREL Q+ KV R L D G V A + G ++R + L+A +
Sbjct: 145 VQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAIL 204
Query: 163 VGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPG-----KIQVG 217
V T + ML + R DS+++ V+DE D + Q+ + +LL K Q
Sbjct: 205 VATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSS--KQVGSVRKLLTSFSSCDKRQTV 262
Query: 218 VFSATMPPEALEITRKFMNKPV-RILVKRDELTLE---------GIKQFYVNVEKEEWKL 267
SA++P + F++ + + KRD + + + +V EK K
Sbjct: 263 FASASIPQH-----KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTN-KH 316
Query: 268 ETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVS-----------------ATH 310
+ L L E+ A ++IFV + + K ND + +
Sbjct: 317 QVLLALLESDAPESAIIFVGEQSE----KSKKAGNDPSTTLLMEFLKTSYKGSLEILLLE 372
Query: 311 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 370
GDM+ N+R + E R G +L++TD+ ARGID+ + + + N+DLP +YLHR GR+
Sbjct: 373 GDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRA 432
Query: 371 GR--FG-RKGVAINFVTLDDSRMLSDIQKFYNVTVEEL 405
GR F RK + N +T ++ +L + + EE+
Sbjct: 433 GRKPFSDRKCIVANLITSEERFVLQRYENELMFSCEEM 470
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 197/447 (44%), Gaps = 82/447 (18%)
Query: 41 SFDAMGLQENLLRGIYA-YGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
SF ++GL L + GFE P+ +Q + I G DV+ A +GTGKT + + ++
Sbjct: 30 SFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLI 89
Query: 100 QQLDYGLVQCQ------ALVLAPTRELAQQI-EKVMRALGDYLGVKVHACVGGTSVREDQ 152
L + ALV+ PTREL Q+ E + + L + + +GG +++
Sbjct: 90 HHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEK 149
Query: 153 RILQAGVHTVVGTPGRVFDMLRR-QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLL- 210
L+ G+ ++ TPGR+ D L+ S +++ + DEAD +L G+ +I I +LL
Sbjct: 150 ARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLG 209
Query: 211 -------------PGKIQVG--VFSATMPPEALEITRKFMNKPVRILVK----RDELTLE 251
P IQ + SAT+ + ++ + ++ PV I + + L++E
Sbjct: 210 SGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKLQQNLSIE 269
Query: 252 G-------IKQFYVNVEK------EEWK---------------------LETLCDLYETL 277
+ ++V K E++ L L +L+E
Sbjct: 270 SPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKNLFERE 329
Query: 278 AITQSVIFVNTRRKVD----------WLTDKMRSNDHTVSA--------THGDMDQNTRD 319
A + V+F +TR VD W + + T HG M+Q R
Sbjct: 330 ASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSMEQEDRR 389
Query: 320 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVA 379
F++ VL++TD+ ARG+D +V +I YD P + Y+HR+GR+ R G KG A
Sbjct: 390 SAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIGEKGEA 449
Query: 380 INFVTLDDSRMLSDIQKFYNVTVEELP 406
+ F+ + L +++K + ++ E P
Sbjct: 450 LLFLQPIEIDYLKELKK-HGASLTEYP 475
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 179/392 (45%), Gaps = 24/392 (6%)
Query: 37 EVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
++ ++F +GL E ++ + E P+ IQ GI + V+ + +G+GKT +
Sbjct: 109 KLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLL 168
Query: 97 GILQ-----QLDYGLV----QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 147
I+Q + + G + + +VL PTREL++Q+ +V +++ + + GG+
Sbjct: 169 PIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSR 228
Query: 148 VREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIF 207
+R + L + VVGTPGR+ + ++ I VLDEAD M RGF +I
Sbjct: 229 IRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFL 288
Query: 208 QLLPGK--------IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVN 259
L + Q + +ATM ++ + + + + ++
Sbjct: 289 APLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIK 348
Query: 260 VEKEEWKLETLCDLYE-TLAITQSV-IFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNT 317
+ E KLE L + E +LA V +F NT + + N + HG++
Sbjct: 349 LSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQ 408
Query: 318 RDIIMREFR--SGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 375
R +++F+ G L+ TDL ARG+D+ V V+ +D P +YLHR GR+ R G
Sbjct: 409 RVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMGA 467
Query: 376 KGVAINFVTLDDSRMLSDIQKFY--NVTVEEL 405
KG + V+ D + + I++ N ++E L
Sbjct: 468 KGKVTSLVSRKDQMLAARIEEAMRNNESLESL 499
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 149/312 (47%), Gaps = 40/312 (12%)
Query: 47 LQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 106
L E+++ + GFE + +Q I C DV+ A +G+GKT F ++ +
Sbjct: 24 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 83
Query: 107 V------QCQALVLAPTRELAQQIEKVMRALG-DYLGVKVHACVGGTSVREDQRILQA-G 158
Q ++++PTREL+ QI KV RA+ D+ + V D L+ G
Sbjct: 84 SYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCR--------EVEADMNTLEEEG 135
Query: 159 VHTVVGTPGRVFDMLRR-QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
+ ++GTPGR+ DM++R + L ++++ +LDEAD +L GF+ Q+ I LP + + G
Sbjct: 136 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 195
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETL 277
+FSAT ++ + G++ Y+ E ++ K L L
Sbjct: 196 LFSATQTQAVADLAKA------------------GLRNPYLKCEADQ-KSSQLVHLLIEN 236
Query: 278 AITQSVIFVNTRRKVDW---LTDKMRS-NDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 333
+ V+F T VD+ + K+ S + THG MDQ RD + F SS VL
Sbjct: 237 KNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVL 296
Query: 334 ITTDLLARGIDV 345
+ TD+ ARG+D+
Sbjct: 297 LCTDVAARGLDI 308
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 173/380 (45%), Gaps = 42/380 (11%)
Query: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F +G E++++ + F+RP+ IQ P G I QSG+GKT + ++Q
Sbjct: 375 TFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQ 434
Query: 101 QLDYGLVQCQA---------LVLAPTRELAQQIEKVMRALGDYLGVKVHACV--GGTSVR 149
+L +Q + +VL PT ELA Q+ R++ GV + V GG R
Sbjct: 435 RLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKS-GVPFRSMVVTGGFRQR 493
Query: 150 EDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRG-FKDQIYDIFQ 208
L+ GV ++ TPGR ++ L +++ +LDE D + F+ + ++
Sbjct: 494 TQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLIN 553
Query: 209 LLPGKIQVGVFSATMPPEALEITRK----FMNKPVRILVKRDELTLEGIKQFYV------ 258
P Q +AT+P LEI K F + V ++ R +++F V
Sbjct: 554 SSPVTAQYLFVTATLP---LEIYNKLVEVFPDCEV-VMGPRVHRVSNALEEFLVDCSGDD 609
Query: 259 NVEKE-----EWKLETLCDLYETLAITQSVIFVN---TRRKVDWLTDKMRSNDHTVSAT- 309
N EK + K L + E +++++IF N T RKV+ + ++ + +
Sbjct: 610 NAEKTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLP 669
Query: 310 -HGDMDQNTRDIIMREFRSG----SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYL 364
H + Q +R M+EF S +S L+ TD +RGID V V+ +D P P Y+
Sbjct: 670 FHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYV 729
Query: 365 HRIGRSGRFGR-KGVAINFV 383
R+GR+ R R KG A FV
Sbjct: 730 RRVGRTARGARGKGKAFIFV 749
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 177/386 (45%), Gaps = 76/386 (19%)
Query: 79 DVIQQAQSGTGKTATFCSGILQQLDYGLVQC-QALVLAPTRELAQQIEKVMRALGDYLGV 137
D+ + +G+GKT ++ I+Q L V+C +ALV+ PTR+LA Q++ V A+ +G+
Sbjct: 74 DICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGL 133
Query: 138 KVHACVGGTSVRED---------------------QRILQAGVHTVVGTPGRVFDMLRR- 175
V + VG +S+ + + L++ V +V TPGR+ D +
Sbjct: 134 SVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNT 193
Query: 176 QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMP--PEAL----- 228
+ + ++ V+DE D +L ++ + + QL +F + P P A
Sbjct: 194 KGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDD-SLFPSFTPFVPSAFGSLQT 252
Query: 229 ----EITRKFMNKPVRILVK---RDELTLEGIKQFYVNVEKEEW------------KLET 269
+ R F KP LVK LT + K +++ + KLE
Sbjct: 253 VRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLEC 312
Query: 270 LCDLYET-------LAITQS------VIFVN----TRRKVDWLT----DKMRSNDHTVSA 308
L + ET +A+ +S +IF + TRR L K+++ +++
Sbjct: 313 LRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYS--- 369
Query: 309 THGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 368
G ++Q+ R ++ FR G +VL+ +D L RG+DV+ V+ VINYD+P + ++HR G
Sbjct: 370 --GGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAG 427
Query: 369 RSGRFGRKGVAINFVTLDDSRMLSDI 394
R+ R G+ G ++ + R S +
Sbjct: 428 RTARAGQAGRCFTLLSNHEVRRFSKL 453
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 144/324 (44%), Gaps = 53/324 (16%)
Query: 123 QIEKVMRALG-----DYLGVKVHACVGGTSVREDQRILQAGVHTV-VGTPGRVFDMLRRQ 176
Q+ KV R L D G V A + G ++R + L+A + V T + ML +
Sbjct: 2 QVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKH 61
Query: 177 SLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPG-----KIQVGVFSATMPPEALEIT 231
R DS+++ V+DE D + Q+ + +LL K Q SA++P
Sbjct: 62 IFRIDSVRVLVVDEVDFLFYSS--KQVGSVRKLLTSFSSCDKRQTVFASASIPQH----- 114
Query: 232 RKFMNKPVR-ILVKRDELTLE---------GIKQFYVNVEKEEWKLETLCDLYETLAITQ 281
+ F++ ++ KRD + + + +V EK K + L L E+ A
Sbjct: 115 KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTN-KHQVLLALLESDAPES 173
Query: 282 SVIFVNTRRKVDWLTDKMRSNDHTVSAT-----------------HGDMDQNTRDIIMRE 324
++IFV + + K ND + + GDM+ N+R + E
Sbjct: 174 AIIFVGEQSE----KSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTE 229
Query: 325 FRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGR--FG-RKGVAIN 381
R G +L++TD+ ARGID+ + + + N+DLP +YLHR GR+GR F RK + N
Sbjct: 230 IRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVAN 289
Query: 382 FVTLDDSRMLSDIQKFYNVTVEEL 405
+T ++ +L + + EE+
Sbjct: 290 LITSEERFVLQRYENELMFSCEEM 313
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 33/206 (16%)
Query: 28 GQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSG 87
G D F + V S+ ++GL +N+ + GF+RPS Q I G DVI A++G
Sbjct: 70 GNDTFFADHTV--SWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETG 127
Query: 88 TGKTATFCSGILQQLDYGLVQCQ--------------ALVLAPTRELAQQIEKVMRALGD 133
+GKT + + I+ QL + + +L+L P L +Q+ +++ L D
Sbjct: 128 SGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVD 187
Query: 134 YLG---VKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDML------RRQSLRPDSIK 184
G ++V A G Q +V TP + + + R + LR +K
Sbjct: 188 EDGNPLLRVEAVCGS------QGWPDRLPDIIVSTPAALLNNIEPKRNRRLEFLR--CVK 239
Query: 185 MFVLDEADEMLSRGFKDQIYDIFQLL 210
V DEAD +L F++QI + +L
Sbjct: 240 YVVFDEADMLLCGSFQNQIIRLINML 265
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 281 QSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 340
++++F NT V+ + D + H + + R I+ +FR + V + TD A
Sbjct: 426 RTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFRE-TGGVFVCTDAAA 484
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT 384
RG+DV VS VI D + ++LHRIGR+ R G+ G + T
Sbjct: 485 RGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYT 528
>AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase
L4B | chr1:22431093-22438302 REVERSE LENGTH=1150
Length = 1150
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%)
Query: 283 VIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
+I+ +R + +T+ +R H + HG MD R + +++ ++ T G
Sbjct: 693 IIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMG 752
Query: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDD 387
I+ V VI++ LP E Y GR+GR G++ + + + D
Sbjct: 753 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTD 797
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 283 VIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
+++ + + D ++ +R N+ H + R I F S RV++ T G
Sbjct: 490 IVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVVATVAFGMG 549
Query: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 375
+D V VI++ +P E Y+ IGR+GR GR
Sbjct: 550 LDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGR 582
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 312 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 371
D+ + R ++++F++ RVL+T +LL G++ + L+++ +LPT +Y HR GR
Sbjct: 658 DLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMR 717
Query: 372 RFGRK 376
R GRK
Sbjct: 718 RPGRK 722
>AT4G37020.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: eukaryotic initiation factor 4A-III
(TAIR:AT3G19760.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr4:17445778-17447135 FORWARD LENGTH=212
Length = 212
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 89/193 (46%), Gaps = 36/193 (18%)
Query: 255 QFYVNVEKEEWKLETLCDLYETLA---ITQSVIFVNTRRKVDWLTDKMRSNDH-TVSATH 310
FY+ V++ ++K+ET+ +L L V+ ++R ++D + + + + +++A +
Sbjct: 22 HFYLAVDRPQFKMETVVELLGVLGRRPWLPIVVCCSSRDELDAVCSSLSTLPYISLAALY 81
Query: 311 GDMDQNTRDIIMREFRSGS--------------------------SRVLITTDLLARGID 344
D+ R +++ +FR + S +++ TD+ +
Sbjct: 82 SDLADRERAMVIEKFRQATINWNQQLNSVVEEGLEESENGKEEKTSHLVVVTDVCLPLLS 141
Query: 345 VQQVS----LVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNV 400
+ S ++INY+LPT+ E Y RI G G+ IN V + L +++ +
Sbjct: 142 SGESSLSARVLINYELPTKKETYTRRITTCLASG--GIVINMVVGGEVTTLKSLEESSGI 199
Query: 401 TVEELPSNVADLL 413
+ E+P N++++L
Sbjct: 200 LIAEMPINISEIL 212