Miyakogusa Predicted Gene

Lj3g3v2664160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2664160.1 Non Chatacterized Hit- tr|I3SW69|I3SW69_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,69.7,8e-19,Lipase/lipooxygenase domain (PLAT/LH2
domain),Lipase/lipooxygenase, PLAT/LH2; Lipoxygenase homology
,NODE_20493_length_315_cov_2905.558838.path1.1
         (118 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55020.1 | Symbols: LOX1, ATLOX1 | lipoxygenase 1 | chr1:2052...    96   4e-21
AT3G22400.1 | Symbols: LOX5 | PLAT/LH2 domain-containing lipoxyg...    78   1e-15

>AT1G55020.1 | Symbols: LOX1, ATLOX1 | lipoxygenase 1 |
           chr1:20525798-20530143 FORWARD LENGTH=859
          Length = 859

 Score = 96.3 bits (238), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 52/120 (43%), Positives = 74/120 (61%), Gaps = 15/120 (12%)

Query: 1   MQKNVLDINSIISAEKIADGIFDGVTSIFDTLTSFLGRSISLQLISA--TQADSSGKGKL 58
           M+KNVLD N             D   S  D L  FLG  I+L+L+S+  T +++  KGKL
Sbjct: 28  MKKNVLDFN-------------DFNASFLDRLHEFLGNKITLRLVSSDVTDSENGSKGKL 74

Query: 59  GNAAYVDAIINNLPTLGASQNACSVSFDYDSSFGIPGAFYIKNYMSTEFLLVSVTLEDIP 118
           G AA+++  I  + +L A ++A  V+FDY++ FG PGAF I+N   +EFLL S+TLED+P
Sbjct: 75  GKAAHLEDWITTITSLTAGESAFKVTFDYETDFGYPGAFLIRNSHFSEFLLKSLTLEDVP 134


>AT3G22400.1 | Symbols: LOX5 | PLAT/LH2 domain-containing
           lipoxygenase family protein | chr3:7927011-7931167
           FORWARD LENGTH=886
          Length = 886

 Score = 78.2 bits (191), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 16/121 (13%)

Query: 1   MQKNVLDINSIISAEKIADGIFDGVTSIFDTLTSFLGRSISLQLISATQADSSG--KGKL 58
           M+KN+LD   +++             S+ D +   LGR +SL LIS+ Q D +   +G+L
Sbjct: 42  MKKNLLDFKDVMA-------------SLLDRVNELLGRRVSLHLISSHQPDPANEKRGRL 88

Query: 59  GNAAYVDAIINNLPT-LGASQNACSVSFDYDSSFGIPGAFYIKNYMSTEFLLVSVTLEDI 117
           G AA+++  +  + T + A + A  V+FD+D S G P AF IKN+  ++F L S+TL   
Sbjct: 89  GKAAHLEKWVTKIKTSVTAEETAFGVTFDWDESMGPPAAFVIKNHHHSQFYLKSLTLRGF 148

Query: 118 P 118
           P
Sbjct: 149 P 149