Miyakogusa Predicted Gene

Lj3g3v2658840.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2658840.3 tr|A9S0G0|A9S0G0_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,43.52,2e-18, ,CUFF.44338.3
         (107 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G72640.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   136   3e-33
AT1G72640.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   135   4e-33

>AT1G72640.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr1:27346409-27348147 REVERSE LENGTH=312
          Length = 312

 Score =  136 bits (342), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/107 (63%), Positives = 78/107 (72%)

Query: 1   MGQMVILQLIVKKARIKTLVKDKRVALEAFGNYVESMAGDTKDNRFLKKALRGVRTIICP 60
           +GQM+ILQLIVK  R+K LVKDKR ALEAFG+YVE   GD  D RFLKKA +GV  +I P
Sbjct: 115 LGQMIILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISP 174

Query: 61  NEGFPSSVGSLQGVQHVIFLSQLSVYSGKSGIQSMMKSNAGKLAGQD 107
            EGF S V S +GV+H + LSQLSVY    GIQ+MM S A KLA QD
Sbjct: 175 TEGFLSIVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQD 221


>AT1G72640.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr1:27346409-27348147 REVERSE LENGTH=311
          Length = 311

 Score =  135 bits (341), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/107 (63%), Positives = 78/107 (72%)

Query: 1   MGQMVILQLIVKKARIKTLVKDKRVALEAFGNYVESMAGDTKDNRFLKKALRGVRTIICP 60
           +GQM+ILQLIVK  R+K LVKDKR ALEAFG+YVE   GD  D RFLKKA +GV  +I P
Sbjct: 114 LGQMIILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISP 173

Query: 61  NEGFPSSVGSLQGVQHVIFLSQLSVYSGKSGIQSMMKSNAGKLAGQD 107
            EGF S V S +GV+H + LSQLSVY    GIQ+MM S A KLA QD
Sbjct: 174 TEGFLSIVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQD 220