Miyakogusa Predicted Gene
- Lj3g3v2656760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2656760.1 Non Chatacterized Hit- tr|I1K622|I1K622_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55586
PE,90.14,0,coiled-coil,NULL; AA_TRNA_LIGASE_II,Aminoacyl-tRNA
synthetase, class II; WHEP_TRS_2,WHEP-TRS; asnS: ,CUFF.44329.1
(364 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G56680.1 | Symbols: SYNC1, EMB2755, SYNC1 ARATH | Class II am... 626 e-180
AT1G70980.1 | Symbols: SYNC3 | Class II aminoacyl-tRNA and bioti... 596 e-170
AT4G17300.1 | Symbols: NS1, OVA8, ATNS1 | Class II aminoacyl-tRN... 375 e-104
AT3G07420.1 | Symbols: NS2, ATNS2, SYNC2_ARATH, SYNC2 | asparagi... 353 8e-98
AT4G31180.2 | Symbols: | Class II aminoacyl-tRNA and biotin syn... 112 5e-25
AT4G31180.1 | Symbols: | Class II aminoacyl-tRNA and biotin syn... 112 5e-25
AT1G68420.1 | Symbols: | Class II aaRS and biotin synthetases s... 109 4e-24
AT4G26870.1 | Symbols: | Class II aminoacyl-tRNA and biotin syn... 108 5e-24
>AT5G56680.1 | Symbols: SYNC1, EMB2755, SYNC1 ARATH | Class II
aminoacyl-tRNA and biotin synthetases superfamily
protein | chr5:22936645-22938841 FORWARD LENGTH=572
Length = 572
Score = 626 bits (1614), Expect = e-180, Method: Compositional matrix adjust.
Identities = 287/364 (78%), Positives = 329/364 (90%)
Query: 1 MFQVTTLLSEAERLEKELIHNPPPTEADVEAARLIVQEKGGIVSQLKSAKARKQEISASV 60
MFQ TTL++ ERLE++LI NPPPTEADVEAARLIV E+G +V++LK+AKA K+ I+A+V
Sbjct: 209 MFQATTLINYTERLEQDLIDNPPPTEADVEAARLIVIERGNVVAELKAAKASKEAITAAV 268
Query: 61 DDLKKAKESLSKVEERSKLKPGIPQKDGKVDYTRDFFARQAFLTVSGQLQVESYACALSS 120
+LK AKE+ + ++ERS+L+PG+P+KDG +DY++DFF RQAFLTVSGQLQVE+YACALS+
Sbjct: 269 AELKIAKETFAHIDERSRLRPGLPKKDGNIDYSKDFFGRQAFLTVSGQLQVETYACALSN 328
Query: 121 VYTFGPTFRAENSHTTRHLAEFWMVEPEIAFADLEDDMNCAEAYVKFLCQWLLDSCLEDM 180
VYTFGPTFRAENSHT+RHLAEFWMVEPEIAFADLEDDMNCAEAYVK++C WLL+ C DM
Sbjct: 329 VYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADLEDDMNCAEAYVKYMCNWLLEKCYADM 388
Query: 181 EFMADKFDKSCIDRLKMVASTPFIRISYTEAVEVLVEAVKNGKKFENEVKWGIDLASEHE 240
E MA FD CIDRLK+VASTPF RI+YT+A+E+L EAV GK+F+N V+WGIDLASEHE
Sbjct: 389 ELMAKNFDSGCIDRLKLVASTPFGRITYTKAIELLEEAVAKGKEFDNNVEWGIDLASEHE 448
Query: 241 RYLTEVKFQKPVIVYNYPKDIKAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERYDV 300
RYLTEV FQKP+IVYNYPK IKAFYMRLNDD KTVAAMDVLVPKVGELIGGSQREERYDV
Sbjct: 449 RYLTEVLFQKPLIVYNYPKGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERYDV 508
Query: 301 IVKRISEMGLPLEPYEWYLDLRRYGTVKHAGFGLGFERMILFATGLENIRDVIPFSRYPG 360
I KRI EMGLP+EPYEWYLDLRRYGTVKH GFGLGFERMILFATGL+NIRDVIPF RYPG
Sbjct: 509 IKKRIEEMGLPIEPYEWYLDLRRYGTVKHCGFGLGFERMILFATGLDNIRDVIPFPRYPG 568
Query: 361 RADL 364
+ADL
Sbjct: 569 KADL 572
>AT1G70980.1 | Symbols: SYNC3 | Class II aminoacyl-tRNA and biotin
synthetases superfamily protein | chr1:26762339-26764394
FORWARD LENGTH=571
Length = 571
Score = 596 bits (1536), Expect = e-170, Method: Compositional matrix adjust.
Identities = 280/366 (76%), Positives = 319/366 (87%), Gaps = 2/366 (0%)
Query: 1 MFQVTTLLSEAERLEKELIHNPPPTEADVEAARLIVQEKGGIVSQLKSAKARKQEISASV 60
MFQVTTL++ ER+E++LI NPPPTEADVEAARLIV+E+G V+QLK AKA K+EI+ASV
Sbjct: 206 MFQVTTLINHTERVEQDLIDNPPPTEADVEAARLIVKERGEAVAQLKVAKASKEEITASV 265
Query: 61 DDLKKAKESLSKVEERSKLKPGIPQKDGKVDYTRDFFARQAFLTVSGQLQVESYACALSS 120
L AK SL+ VEER +LKPG+P+ DGK+DY+ DFF RQAFLTVSGQLQVE+YACALSS
Sbjct: 266 AQLSVAKASLAHVEERLRLKPGLPKNDGKIDYSNDFFGRQAFLTVSGQLQVETYACALSS 325
Query: 121 VYTFGPTFRAENSHTTRHLAEFWMVEPEIAFADLEDDMNCAEAYVKFLCQWLLDSCLEDM 180
VYTFGPTFRAENSHT+RHLAEFWMVEPEIAFAD+ DDMNCAEAYVK++C+WL+D C +DM
Sbjct: 326 VYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADIHDDMNCAEAYVKYMCKWLMDKCGDDM 385
Query: 181 EFMADKFDKSCIDRLKMVASTPFIRISYTEAVEVLVEAVKNGK-KFENEVKWGIDLASEH 239
E M D+ C RL MVA F R++YTEA+E L +AV GK F+N+V+WGIDLASEH
Sbjct: 386 ELMDKNVDEGCTKRLNMVAKASFKRVTYTEAIERLEKAVAQGKVVFDNKVEWGIDLASEH 445
Query: 240 ERYLTEVKF-QKPVIVYNYPKDIKAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERY 298
ERYLTEV+F QKP+IVYNYPK IKAFYMRLNDD KTVAAMDVLVPKVGELIGGSQREERY
Sbjct: 446 ERYLTEVEFDQKPIIVYNYPKGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERY 505
Query: 299 DVIVKRISEMGLPLEPYEWYLDLRRYGTVKHAGFGLGFERMILFATGLENIRDVIPFSRY 358
DVI +RI EMGLP+EPYEWYLDLRRYGTVKH GFGLGFERMI FATG++NIRDVIPF RY
Sbjct: 506 DVIKQRIEEMGLPMEPYEWYLDLRRYGTVKHCGFGLGFERMIQFATGIDNIRDVIPFPRY 565
Query: 359 PGRADL 364
PG+ADL
Sbjct: 566 PGKADL 571
>AT4G17300.1 | Symbols: NS1, OVA8, ATNS1 | Class II aminoacyl-tRNA
and biotin synthetases superfamily protein |
chr4:9681558-9684833 FORWARD LENGTH=567
Length = 567
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/284 (62%), Positives = 226/284 (79%), Gaps = 5/284 (1%)
Query: 83 IPQ-KDGKVDYTRDFFARQAFLTVSGQLQVESYACALSSVYTFGPTFRAENSHTTRHLAE 141
IP+ K G +D+++DFF + AFLTVSGQL E+YA ALS VYTFGPTFRAENS+T+RHLAE
Sbjct: 287 IPKTKGGLIDWSQDFFGKPAFLTVSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAE 346
Query: 142 FWMVEPEIAFADLEDDMNCAEAYVKFLCQWLLDSCLEDMEFMADKFDKSCIDRLKMVAST 201
FWM+EPE+AFADL+DDM CA AY++++ +++LD+C EDMEF +K I RL VA
Sbjct: 347 FWMIEPELAFADLDDDMACATAYLQYVVKYVLDNCKEDMEFFDTWIEKGIIRRLSDVAEK 406
Query: 202 PFIRISYTEAVEVLVEAVKNGKKFENEVKWGIDLASEHERYLTEVKF-QKPVIVYNYPKD 260
F+++ YT+A+E+L++A KKF+ VKWG+DL SEHERY+TE F +PVI+ +YPK+
Sbjct: 407 EFLQLGYTDAIEILLKA---NKKFDFPVKWGLDLQSEHERYITEEAFGGRPVIIRDYPKE 463
Query: 261 IKAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERYDVIVKRISEMGLPLEPYEWYLD 320
IKAFYMR NDD KTVAAMD+LVP++GELIGGSQREER +V+ R+ E+ L E Y WYLD
Sbjct: 464 IKAFYMRENDDGKTVAAMDMLVPRIGELIGGSQREERLEVLEARLDELKLNKESYWWYLD 523
Query: 321 LRRYGTVKHAGFGLGFERMILFATGLENIRDVIPFSRYPGRADL 364
LRRYG+V HAGFGLGFER++ F TG++NIRDVIPF R P A+
Sbjct: 524 LRRYGSVPHAGFGLGFERLVQFVTGIDNIRDVIPFPRTPASAEF 567
>AT3G07420.1 | Symbols: NS2, ATNS2, SYNC2_ARATH, SYNC2 |
asparaginyl-tRNA synthetase 2 | chr3:2374179-2376644
REVERSE LENGTH=638
Length = 638
Score = 353 bits (907), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 172/366 (46%), Positives = 250/366 (68%), Gaps = 8/366 (2%)
Query: 1 MFQVTTLLSEAERLEKELIHNPPPTEAD---VEAARLIVQEKGGIVSQLKSAKARKQEIS 57
MF+VTTLL + + E++ PP E D ++ + +++EK ++ LK + + ++ +
Sbjct: 277 MFRVTTLLGKTDDKEEK---KPPVQEKDGFSIDTVKAVIKEKTRLIDHLKRSDSNRETVV 333
Query: 58 ASVDDLKKAKESLSKVEERSKLKPGIPQKDGKVDYTRDFFARQAFLTVSGQLQVESYACA 117
A+V DLKK + S++E + K K G K K+D+++DFF R +LT SG+ +ESYA A
Sbjct: 334 AAVHDLKKTNDLASQIEMKQKSKTGTLVKPEKLDFSKDFFGRDTYLTASGRFHLESYASA 393
Query: 118 LSSVYTFGPTFRAENSHTTRHLAEFWMVEPEIAFADLEDDMNCAEAYVKFLCQWLLDSCL 177
L VYTFGP F A+ RHLAE W VE E+AFA+L+D M+CA+ Y KFLC+++L++
Sbjct: 394 LGKVYTFGPRFIADKIDNARHLAEKWNVETEMAFAELDDAMDCADEYFKFLCKYVLENRD 453
Query: 178 EDMEFMADKFDKSCIDRLKMVASTPFIRISYTEAVEVLVEAVKNGKKFENEVKWGIDLAS 237
EDM+F++ + DK+ RL+ AS+ +R SYTE + +L +A KFE + +WG+ L +
Sbjct: 454 EDMKFISKRVDKTITTRLEATASSSLLRFSYTEVISLLQKATTT--KFETKPEWGVALTT 511
Query: 238 EHERYLTEVKFQKPVIVYNYPKDIKAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREER 297
EH YLT+ ++ PVIV+ YPK IK FY+RLNDD KTVAA D++VPKVG +I GSQ EER
Sbjct: 512 EHLSYLTDEIYKGPVIVHTYPKAIKQFYVRLNDDKKTVAAFDLVVPKVGVVITGSQNEER 571
Query: 298 YDVIVKRISEMGLPLEPYEWYLDLRRYGTVKHAGFGLGFERMILFATGLENIRDVIPFSR 357
++++ RI E G E +EWYLDLRR+GTVKH+G L E+M+L+ATGL +I+D IPF R
Sbjct: 572 FEILDARIGESGFTREKFEWYLDLRRHGTVKHSGISLSMEQMLLYATGLPDIKDAIPFPR 631
Query: 358 YPGRAD 363
G+A+
Sbjct: 632 SWGKAN 637
>AT4G31180.2 | Symbols: | Class II aminoacyl-tRNA and biotin
synthetases superfamily protein | chr4:15156696-15159362
FORWARD LENGTH=558
Length = 558
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 139/281 (49%), Gaps = 20/281 (7%)
Query: 88 GKVDYTRDFFARQAFLTVSGQLQVESYACA-LSSVYTFGPTFRAENSHTTRHLAEFWMVE 146
G + ++ + A L S QL + C L V+ GP FRAE+S T RHL EF ++
Sbjct: 288 GSAVFRLEYKGQPACLAQSPQLHKQMAICGDLRRVFEVGPVFRAEDSFTHRHLCEFVGLD 347
Query: 147 PEIAF-ADLEDDMNCAEAYVKFLCQWLLDSCLEDMEFMADKFDKSCIDRLKMVASTPFIR 205
E+ + M+ + F+ L + C ++++ + ++ + LK + T +R
Sbjct: 348 VEMEIRKHYSEIMDLVDELFVFIFTSLNERCKKELQAVGKQYP---FEPLKFLPKT--LR 402
Query: 206 ISYTEAVEVLVEAVKNGKKFENEVKWGIDLASEHERYLTEVKFQKP----VIVYNYPKDI 261
+++ E V++L EA EV DL +E ER L ++ +K I++ YPK +
Sbjct: 403 LTFEEGVQMLKEA-------GVEVDPLGDLNTESERKLGQLVLEKYNTEFYILHRYPKAV 455
Query: 262 KAFY-MRLNDDSKTVAAMDVLVPKVGELIGGSQREERYDVIVKRISEMGLPLEPYEWYLD 320
+ FY M D+ + DV + + E+I G+QR +V+ +R E G+ ++ Y+D
Sbjct: 456 RPFYTMTCADNPLYSNSFDVFI-RGEEIISGAQRVHIPEVLEQRAGECGIDVKTISTYID 514
Query: 321 LRRYGTVKHAGFGLGFERMILFATGLENIRDVIPFSRYPGR 361
RYG H GFG+G ER+++ L NIR F R P R
Sbjct: 515 SFRYGAPLHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQR 555
>AT4G31180.1 | Symbols: | Class II aminoacyl-tRNA and biotin
synthetases superfamily protein | chr4:15156696-15159362
FORWARD LENGTH=558
Length = 558
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 139/281 (49%), Gaps = 20/281 (7%)
Query: 88 GKVDYTRDFFARQAFLTVSGQLQVESYACA-LSSVYTFGPTFRAENSHTTRHLAEFWMVE 146
G + ++ + A L S QL + C L V+ GP FRAE+S T RHL EF ++
Sbjct: 288 GSAVFRLEYKGQPACLAQSPQLHKQMAICGDLRRVFEVGPVFRAEDSFTHRHLCEFVGLD 347
Query: 147 PEIAF-ADLEDDMNCAEAYVKFLCQWLLDSCLEDMEFMADKFDKSCIDRLKMVASTPFIR 205
E+ + M+ + F+ L + C ++++ + ++ + LK + T +R
Sbjct: 348 VEMEIRKHYSEIMDLVDELFVFIFTSLNERCKKELQAVGKQYP---FEPLKFLPKT--LR 402
Query: 206 ISYTEAVEVLVEAVKNGKKFENEVKWGIDLASEHERYLTEVKFQKP----VIVYNYPKDI 261
+++ E V++L EA EV DL +E ER L ++ +K I++ YPK +
Sbjct: 403 LTFEEGVQMLKEA-------GVEVDPLGDLNTESERKLGQLVLEKYNTEFYILHRYPKAV 455
Query: 262 KAFY-MRLNDDSKTVAAMDVLVPKVGELIGGSQREERYDVIVKRISEMGLPLEPYEWYLD 320
+ FY M D+ + DV + + E+I G+QR +V+ +R E G+ ++ Y+D
Sbjct: 456 RPFYTMTCADNPLYSNSFDVFI-RGEEIISGAQRVHIPEVLEQRAGECGIDVKTISTYID 514
Query: 321 LRRYGTVKHAGFGLGFERMILFATGLENIRDVIPFSRYPGR 361
RYG H GFG+G ER+++ L NIR F R P R
Sbjct: 515 SFRYGAPLHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQR 555
>AT1G68420.1 | Symbols: | Class II aaRS and biotin synthetases
superfamily protein | chr1:25653893-25654156 FORWARD
LENGTH=87
Length = 87
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 118 LSSVYTFGPTFRAENSHTTRHLAEFWMVEPEIAFADLEDDMNCAEAYVKFLCQWLLDSCL 177
+ VYTF PTFRAE SHT+RHLAEFWMVE E+AFA +E+ MNC+EA VK +C LL+ C
Sbjct: 1 MGDVYTFAPTFRAEKSHTSRHLAEFWMVEVELAFAGVEEAMNCSEAVVKDMCTTLLEKCR 60
Query: 178 EDMEFMADKFDKSCIDR 194
+DME+M +K D+ CIDR
Sbjct: 61 DDMEYMVEKVDEFCIDR 77
>AT4G26870.1 | Symbols: | Class II aminoacyl-tRNA and biotin
synthetases superfamily protein | chr4:13505381-13507619
FORWARD LENGTH=532
Length = 532
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 88 GKVDYTRDFFARQAFLTVSGQLQVESYACA-LSSVYTFGPTFRAENSHTTRHLAEFWMVE 146
G + D+ + A L S QL + C + V+ GP FRAE+S T RHL EF ++
Sbjct: 262 GSAVFRLDYKGQPACLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCEFVGLD 321
Query: 147 PEIAF-ADLEDDMNCAEAYVKFLCQWLLDSCLEDMEFMADKFDKSCIDRLKMVASTPFIR 205
E+ + M+ F+ + + C +++E + ++ LK + T +R
Sbjct: 322 VEMEIRMHYSEIMDLVGELFPFIFTKIEERCPKELESVRKQYP---FQSLKFLPQT--LR 376
Query: 206 ISYTEAVEVLVEAVKNGKKFENEVKWGIDLASEHERYLTEVKFQKP----VIVYNYPKDI 261
+++ E +++L EA + EV DL +E ER L ++ +K +++ YP +
Sbjct: 377 LTFAEGIQMLKEAGE-------EVDPLGDLNTESERKLGQLVLEKYKTEFYMLHRYPSAV 429
Query: 262 KAFY-MRLNDDSKTVAAMDVLVPKVGELIGGSQREERYDVIVKRISEMGLPLEPYEWYLD 320
+ FY M +DS + DV + + E++ G+QR +++ KR E G+ ++ Y+D
Sbjct: 430 RPFYTMPYENDSNYSNSFDVFI-RGEEIMSGAQRIHDPELLEKRARECGIDVKTISTYID 488
Query: 321 LRRYGTVKHAGFGLGFERMILFATGLENIRDVIPFSR 357
RYG H GFG+G ER+++ L NIR F R
Sbjct: 489 AFRYGAPPHGGFGVGLERVVMLLCALNNIRKTSLFPR 525