Miyakogusa Predicted Gene
- Lj3g3v2645610.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2645610.2 Non Chatacterized Hit- tr|I1HJX4|I1HJX4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,56.25,2e-18,seg,NULL; BRX,Brevis radix-like domain; REGULATOR OF
CHROMOSOME CONDENSATION-RELATED,NULL; REGULATOR,CUFF.44326.2
(368 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14000.2 | Symbols: ATBRXL2, BRX-LIKE2 | DZC (Disease resista... 471 e-133
AT3G14000.1 | Symbols: ATBRXL2, BRX-LIKE2 | DZC (Disease resista... 471 e-133
AT1G54180.2 | Symbols: ATBRXL3, BRX-LIKE3 | BREVIS RADIX-like 3 ... 467 e-132
AT1G54180.1 | Symbols: ATBRXL3, BRX-LIKE3 | BREVIS RADIX-like 3 ... 449 e-126
AT5G20540.1 | Symbols: ATBRXL4, BRX-LIKE4, BRXL4 | BREVIS RADIX-... 430 e-121
AT1G31880.1 | Symbols: NLM9, BRX | DZC (Disease resistance/zinc ... 283 9e-77
AT2G35600.1 | Symbols: ATBRXL1, BRXL1 | BREVIS RADIX-like 1 | ch... 274 8e-74
AT2G21030.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Disease re... 127 2e-29
AT5G12350.1 | Symbols: | Regulator of chromosome condensation (... 94 2e-19
AT5G19420.2 | Symbols: | Regulator of chromosome condensation (... 91 1e-18
AT5G19420.1 | Symbols: | Regulator of chromosome condensation (... 91 1e-18
AT1G69710.1 | Symbols: | Regulator of chromosome condensation (... 73 3e-13
AT1G65920.1 | Symbols: | Regulator of chromosome condensation (... 69 6e-12
AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensat... 67 2e-11
AT5G42140.1 | Symbols: | Regulator of chromosome condensation (... 62 9e-10
AT4G16990.5 | Symbols: RLM3 | disease resistance protein (TIR-NB... 58 1e-08
AT4G16990.3 | Symbols: RLM3 | disease resistance protein (TIR-NB... 53 3e-07
AT3G23270.1 | Symbols: | Regulator of chromosome condensation (... 53 4e-07
AT4G16990.2 | Symbols: RLM3 | disease resistance protein (TIR-NB... 52 5e-07
AT4G16990.4 | Symbols: RLM3 | disease resistance protein (TIR-NB... 49 4e-06
>AT3G14000.2 | Symbols: ATBRXL2, BRX-LIKE2 | DZC (Disease
resistance/zinc finger/chromosome condensation-like
region) domain containing protein | chr3:4631170-4633353
REVERSE LENGTH=374
Length = 374
Score = 471 bits (1211), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/382 (65%), Positives = 295/382 (77%), Gaps = 22/382 (5%)
Query: 1 MLTCIACSKQLN--NGSLQPEEEEE-----AVQTPSTKQAIKALTAQIKDMAVKASGAYX 53
MLTCIAC+KQLN NG + +EE+E ++TP +KQ IK+LT+QIKDMAVKASGAY
Sbjct: 1 MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQ-IKSLTSQIKDMAVKASGAYK 59
Query: 54 XXXXXXXXXXXXXXXXYADSDVGSDSARFHMAYHRTGSSNSTPRMWGKEMEARLKGLSSG 113
YADSDV S+S RF AY R GS +STP++ GKEME+RLKG SG
Sbjct: 60 SCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSSTPKILGKEMESRLKGFLSG 119
Query: 114 EGTPASVSGRTES-VMLTEEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNK 172
EGTP S+SGRTES V + EEDE +EW+AQVEPGVLITFVSLP+GGND+KRIRFSREMF+K
Sbjct: 120 EGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMFDK 179
Query: 173 WQAQRWWAENYDKVMELYNVQRFDQNAVPLPTPPRSEDESSRIESARDSPATPPLSKERL 232
WQAQ+WWAEN+DKVMELYNVQ+F+Q +VPLPTPPRSED SSRI+S ++ PATPPL+KE
Sbjct: 180 WQAQKWWAENFDKVMELYNVQQFNQQSVPLPTPPRSEDGSSRIQSTKNGPATPPLNKE-- 237
Query: 233 PRHLHQPMGMGYSSSDSLDHH-QRQPQPR-YETSGLGSTPNLSTISVPKTERSSIEGSVR 290
G GY+SS SL H Q Q R +++SGL +TP LS+IS KTE SS++ S R
Sbjct: 238 -----CSRGKGYASSGSLAHQPTTQTQSRHHDSSGLATTPKLSSISGTKTETSSVDESAR 292
Query: 291 TSSSGEE---DRSG-ELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREK 346
+S S EE D SG ELS+SNAS++ETEWVEQDE GVYITIRALP G RELRRVRFSREK
Sbjct: 293 SSFSREEEEADHSGEELSVSNASDIETEWVEQDEAGVYITIRALPDGTRELRRVRFSREK 352
Query: 347 FGEVHARLWWEENRARIQEQYL 368
FGE +ARLWWE+NRARIQ+QYL
Sbjct: 353 FGETNARLWWEQNRARIQQQYL 374
>AT3G14000.1 | Symbols: ATBRXL2, BRX-LIKE2 | DZC (Disease
resistance/zinc finger/chromosome condensation-like
region) domain containing protein | chr3:4631170-4633353
REVERSE LENGTH=374
Length = 374
Score = 471 bits (1211), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/382 (65%), Positives = 295/382 (77%), Gaps = 22/382 (5%)
Query: 1 MLTCIACSKQLN--NGSLQPEEEEE-----AVQTPSTKQAIKALTAQIKDMAVKASGAYX 53
MLTCIAC+KQLN NG + +EE+E ++TP +KQ IK+LT+QIKDMAVKASGAY
Sbjct: 1 MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQ-IKSLTSQIKDMAVKASGAYK 59
Query: 54 XXXXXXXXXXXXXXXXYADSDVGSDSARFHMAYHRTGSSNSTPRMWGKEMEARLKGLSSG 113
YADSDV S+S RF AY R GS +STP++ GKEME+RLKG SG
Sbjct: 60 SCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSSTPKILGKEMESRLKGFLSG 119
Query: 114 EGTPASVSGRTES-VMLTEEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNK 172
EGTP S+SGRTES V + EEDE +EW+AQVEPGVLITFVSLP+GGND+KRIRFSREMF+K
Sbjct: 120 EGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMFDK 179
Query: 173 WQAQRWWAENYDKVMELYNVQRFDQNAVPLPTPPRSEDESSRIESARDSPATPPLSKERL 232
WQAQ+WWAEN+DKVMELYNVQ+F+Q +VPLPTPPRSED SSRI+S ++ PATPPL+KE
Sbjct: 180 WQAQKWWAENFDKVMELYNVQQFNQQSVPLPTPPRSEDGSSRIQSTKNGPATPPLNKE-- 237
Query: 233 PRHLHQPMGMGYSSSDSLDHH-QRQPQPR-YETSGLGSTPNLSTISVPKTERSSIEGSVR 290
G GY+SS SL H Q Q R +++SGL +TP LS+IS KTE SS++ S R
Sbjct: 238 -----CSRGKGYASSGSLAHQPTTQTQSRHHDSSGLATTPKLSSISGTKTETSSVDESAR 292
Query: 291 TSSSGEE---DRSG-ELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREK 346
+S S EE D SG ELS+SNAS++ETEWVEQDE GVYITIRALP G RELRRVRFSREK
Sbjct: 293 SSFSREEEEADHSGEELSVSNASDIETEWVEQDEAGVYITIRALPDGTRELRRVRFSREK 352
Query: 347 FGEVHARLWWEENRARIQEQYL 368
FGE +ARLWWE+NRARIQ+QYL
Sbjct: 353 FGETNARLWWEQNRARIQQQYL 374
>AT1G54180.2 | Symbols: ATBRXL3, BRX-LIKE3 | BREVIS RADIX-like 3 |
chr1:20227697-20229728 FORWARD LENGTH=344
Length = 344
Score = 467 bits (1201), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/372 (63%), Positives = 278/372 (74%), Gaps = 32/372 (8%)
Query: 1 MLTCIACSKQLN--NGSLQPEEEEE--AVQTPSTKQAIKALTAQIKDMAVKASGAYXXXX 56
MLTCIAC+KQLN NG EE+EE + TP TKQAIK+LT+Q+KDMAVKASGAY
Sbjct: 1 MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKNCK 60
Query: 57 XXXXXXXXXXXXXYADSDVGSDSARFHMAYHRTGSSNSTPRMWGKEMEARLKGLSSGEGT 116
YADSD SDS RFH +Y R G++ STP++WG EME+RLKG+SS EGT
Sbjct: 61 PCSGTTNRNQNRNYADSDAASDSGRFHYSYQRAGTATSTPKIWGNEMESRLKGISSEEGT 120
Query: 117 PASVSGRTESVMLTEEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQ 176
P S+SGRTES++ E+DE +EW+AQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQ
Sbjct: 121 PTSMSGRTESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQ 180
Query: 177 RWWAENYDKVMELYNVQRFDQNAVPLPTPPRSEDESSRIESARDSPATPPLSKERLPRHL 236
+WW EN++KVMELYNVQ F+Q +VPL TPP SED S+I+S +DSP TPPL +ER R++
Sbjct: 181 KWWVENFEKVMELYNVQ-FNQQSVPLQTPPVSEDGGSQIQSVKDSPVTPPLERERPHRNI 239
Query: 237 HQPMGMGYSSSDSLDHHQRQPQPRYETSGLGSTPNLSTISVPKTERSSIEGSVRTSSSGE 296
+SG STP LS+IS KTE SSI+GS R+SS
Sbjct: 240 PG------------------------SSGFASTPKLSSISGTKTETSSIDGSARSSSV-- 273
Query: 297 EDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWW 356
DRS E+S+SNAS+ME+EWVEQDEPG+YITIRALP G RELRRVRFSR+KFGE HARLWW
Sbjct: 274 -DRSEEVSVSNASDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRDKFGETHARLWW 332
Query: 357 EENRARIQEQYL 368
E+NRARIQ+QYL
Sbjct: 333 EQNRARIQQQYL 344
>AT1G54180.1 | Symbols: ATBRXL3, BRX-LIKE3 | BREVIS RADIX-like 3 |
chr1:20227697-20229728 FORWARD LENGTH=370
Length = 370
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/398 (59%), Positives = 277/398 (69%), Gaps = 58/398 (14%)
Query: 1 MLTCIACSKQLN--NGSLQPEEEEE--AVQTPSTKQAIKALTAQIKDMAVKASGAYXXXX 56
MLTCIAC+KQLN NG EE+EE + TP TKQAIK+LT+Q+KDMAVKASGAY
Sbjct: 1 MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKNCK 60
Query: 57 XXXXXXXXXXXXXYADSDVGSDSARFHMAYHRTGSSNSTPRMWGKEMEARLKGLSSGEGT 116
YADSD SDS RFH +Y R G++ STP++WG EME+RLKG+SS EGT
Sbjct: 61 PCSGTTNRNQNRNYADSDAASDSGRFHYSYQRAGTATSTPKIWGNEMESRLKGISSEEGT 120
Query: 117 PASVSGRTESVMLTEEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRF----------- 165
P S+SGRTES++ E+DE +EW+AQVEPGVLITFVSLPQGGNDLKRIRF
Sbjct: 121 PTSMSGRTESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGGNDLKRIRFRSTRFPYYRDQ 180
Query: 166 ---------------SREMFNKWQAQRWWAENYDKVMELYNVQRFDQNAVPLPTPPRSED 210
REMFNKWQAQ+WW EN++KVMELYNVQ F+Q +VPL TPP SED
Sbjct: 181 LLLWCRQGWVFWPQNCREMFNKWQAQKWWVENFEKVMELYNVQ-FNQQSVPLQTPPVSED 239
Query: 211 ESSRIESARDSPATPPLSKERLPRHLHQPMGMGYSSSDSLDHHQRQPQPRYETSGLGSTP 270
S+I+S +DSP TPPL +ER R++ +SG STP
Sbjct: 240 GGSQIQSVKDSPVTPPLERERPHRNIPG------------------------SSGFASTP 275
Query: 271 NLSTISVPKTERSSIEGSVRTSSSGEEDRSGELSISNASEMETEWVEQDEPGVYITIRAL 330
LS+IS KTE SSI+GS R+SS DRS E+S+SNAS+ME+EWVEQDEPG+YITIRAL
Sbjct: 276 KLSSISGTKTETSSIDGSARSSSV---DRSEEVSVSNASDMESEWVEQDEPGIYITIRAL 332
Query: 331 PGGARELRRVRFSREKFGEVHARLWWEENRARIQEQYL 368
P G RELRRVRFSR+KFGE HARLWWE+NRARIQ+QYL
Sbjct: 333 PDGNRELRRVRFSRDKFGETHARLWWEQNRARIQQQYL 370
>AT5G20540.1 | Symbols: ATBRXL4, BRX-LIKE4, BRXL4 | BREVIS
RADIX-like 4 | chr5:6947943-6951760 FORWARD LENGTH=384
Length = 384
Score = 430 bits (1106), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/393 (60%), Positives = 283/393 (72%), Gaps = 34/393 (8%)
Query: 1 MLTCIACSKQLNN-GSLQPEEEEEAVQTPSTKQAIKALTAQIKDMAVKASGAYXXXXXXX 59
MLTCIA SK+ + S QP++ P +K A K+LT+Q+KDMA+KASGAY
Sbjct: 1 MLTCIARSKRAGDESSGQPDD-------PDSKNA-KSLTSQLKDMALKASGAYRHCTPCT 52
Query: 60 XXX---------XXXXXXXYADSDVGSDSARFHMAYHRTGSS-----------NSTPRMW 99
SD SD RF M Y R+ SS PR+W
Sbjct: 53 AAQGQGQGQGPIKNNPSSSSVKSDFESDQ-RFKMLYGRSNSSITATAAVAATQQQQPRVW 111
Query: 100 GKEMEARLKGLSSGEGTPASVSGR--TESVMLTEEDEPREWIAQVEPGVLITFVSLPQGG 157
GKEMEARLKG+SSGE TP S SGR + ++ EE EP+EW+AQVEPGVLITFVSLP GG
Sbjct: 112 GKEMEARLKGISSGEATPKSASGRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSLPGGG 171
Query: 158 NDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFDQNAVPLPTPPRSEDESSRIE- 216
NDLKRIRFSR+MFNK QAQRWWA+NYDKVMELYNVQ+ + A PLPTPPRSEDE++++E
Sbjct: 172 NDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQAFPLPTPPRSEDENAKVEY 231
Query: 217 SARDSPATPPLSKERLPRHLHQPMGMG-YSSSDSLDHHQRQPQPRYETSGLGSTPNLSTI 275
D+PATPPL+KERLPR +H+P G+ YSSSDSLDH+ Q Q Y++ L STP +S+I
Sbjct: 232 HPEDTPATPPLNKERLPRTIHRPPGLAAYSSSDSLDHNSMQSQQFYDSGLLNSTPKVSSI 291
Query: 276 SVPKTERSSIEGSVRTSSSGEEDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGAR 335
SV KTE SSI+ S+R+SSS + DRS E+S+SNAS+++ EWVEQDEPGVYITI+ LPGG R
Sbjct: 292 SVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVLPGGKR 351
Query: 336 ELRRVRFSREKFGEVHARLWWEENRARIQEQYL 368
ELRRVRFSRE+FGE+HARLWWEENRARI EQYL
Sbjct: 352 ELRRVRFSRERFGEMHARLWWEENRARIHEQYL 384
>AT1G31880.1 | Symbols: NLM9, BRX | DZC (Disease resistance/zinc
finger/chromosome condensation-like region) domain
containing protein | chr1:11447804-11450053 FORWARD
LENGTH=344
Length = 344
Score = 283 bits (725), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 172/386 (44%), Positives = 224/386 (58%), Gaps = 60/386 (15%)
Query: 1 MLTCIACSKQLNNGSLQPEEEEEAVQTPSTKQAIKALTAQIKDMAVKASGAYXXXXXXXX 60
M +CIAC+K +G + E TP+TK+A+K+LT QIKDMA+K SGAY
Sbjct: 1 MFSCIACTKA--DGGEEVEHGARGGTTPNTKEAVKSLTIQIKDMALKFSGAYKQCKPCTG 58
Query: 61 XXX---XXXXXXYADSDVGSDSARFHMAYHRTGSSNSTPRMW---------GKEMEARLK 108
+ D D S+ + GS+ STP W +E++
Sbjct: 59 SSSSPLKKGHRSFPDYDNASEGVPYPFM---GGSAGSTP-AWDFTNSSHHPAGRLESKFT 114
Query: 109 GLSSGEGTPASVSGRTESVMLTEEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSRE 168
+ + S+S ++ V+L ++D P+EW+AQVEPGV ITF SLP GGNDLKRIRFSRE
Sbjct: 115 SIYGND--RESISAQSCDVVL-DDDGPKEWMAQVEPGVHITFASLPTGGNDLKRIRFSRE 171
Query: 169 MFNKWQAQRWWAENYDKVMELYNVQRFDQNAVPLPTPPRSEDES------SRIESARDSP 222
MF+KWQAQRWW ENYDK++ELYNVQRF++ A L TP RS+D+S S+++SAR+
Sbjct: 172 MFDKWQAQRWWGENYDKIVELYNVQRFNRQA--LQTPARSDDQSQRDSTYSKMDSARE-- 227
Query: 223 ATPPLSKERLPRHLHQPMGMGYSSSDSLDHHQRQPQPRYETSGLGSTPNLSTISVPKTER 282
SK+ PRH +P G S+ HH Y P +
Sbjct: 228 -----SKDWTPRHNFRPPG-------SVPHHFYGGSSNYGPGSYHGGPPMD--------- 266
Query: 283 SSIEGSVRTSSSGEEDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRF 342
+ RT++S +D S+SNASEM+ EW+E+DEPGVYITIR L G RELRRVRF
Sbjct: 267 -----AARTTTSSRDD---PPSMSNASEMQAEWIEEDEPGVYITIRQLSDGTRELRRVRF 318
Query: 343 SREKFGEVHARLWWEENRARIQEQYL 368
SRE+FGEVHA+ WWE+NR RIQ QYL
Sbjct: 319 SRERFGEVHAKTWWEQNRERIQTQYL 344
>AT2G35600.1 | Symbols: ATBRXL1, BRXL1 | BREVIS RADIX-like 1 |
chr2:14941092-14943281 REVERSE LENGTH=331
Length = 331
Score = 274 bits (700), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 174/383 (45%), Positives = 224/383 (58%), Gaps = 67/383 (17%)
Query: 1 MLTCIACSKQLNNGSLQPEEEEEAVQTPSTKQAIKALTAQIKDMAVKASGAYXXXXXXXX 60
M TCI C+K + G E+E TP+TK+A+K+LT QIKDMA K SG++
Sbjct: 1 MFTCINCTKMADRGEEDEEDEARGSTTPNTKEAVKSLTTQIKDMASKFSGSHKQSKPTPG 60
Query: 61 XXXXXXXXXYADSDVGSDSARFHMAYHRTGSSNSTPRMW---------GKEMEARLKGLS 111
+ D D S+S + + GS++STP W ++R +
Sbjct: 61 SSSSNLRK-FPDFDTASESVPYP---YPGGSTSSTP-AWDLPRSSYHQSGRPDSRFTSMY 115
Query: 112 SGEGTPASVSGRTESVMLTEEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFN 171
GE S+S ++ V+L E+DEP+EW+AQVEPGV ITFVSLP GGNDLKRIRFSRE+F+
Sbjct: 116 GGER--ESISAQSCDVVL-EDDEPKEWMAQVEPGVHITFVSLPSGGNDLKRIRFSREVFD 172
Query: 172 KWQAQRWWAENYDKVMELYNVQRFDQNAVPLPTPPRSEDES------SRIESARDSPATP 225
KWQAQRWW ENYD+++ELYNVQRF++ A L TP RSED+S +RI+SAR+S
Sbjct: 173 KWQAQRWWGENYDRIVELYNVQRFNRQA--LQTPGRSEDQSQRDSTYTRIDSARES---- 226
Query: 226 PLSKERLPRHLHQPMGMGYSSSDSLDHHQRQPQPRYETSGLGSTPNLSTISVPKTERSSI 285
+ + P G S+ HH P +
Sbjct: 227 -RDWTQRDNNFRPPGG-------SVPHHFYGP--------------------------PM 252
Query: 286 EGSVRTSSSGEEDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSRE 345
+ + T+SS +E S+SNASEM+ EWVE+DEPGVYITIR LP G RELRRVRFSRE
Sbjct: 253 DAARITTSSRDE----PPSMSNASEMQGEWVEEDEPGVYITIRQLPDGTRELRRVRFSRE 308
Query: 346 KFGEVHARLWWEENRARIQEQYL 368
+FGEVHA+ WWE+NR RIQ QYL
Sbjct: 309 RFGEVHAKTWWEQNRDRIQTQYL 331
>AT2G21030.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Disease
resistance/zinc finger/chromosome condensation-like
region (InterPro:IPR013591); BEST Arabidopsis thaliana
protein match is: DZC (Disease resistance/zinc
finger/chromosome condensation-like region) domain
containing protein (TAIR:AT1G31880.1); Has 250 Blast
hits to 250 proteins in 17 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink). |
chr2:9024904-9025578 REVERSE LENGTH=158
Length = 158
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 103/178 (57%), Gaps = 39/178 (21%)
Query: 148 ITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFDQNAVPLPTPPR 207
ITF SLP GGNDLKRIRFSREM+NKWQAQR W ENYDK++ELYNVQRF++ A L TP R
Sbjct: 14 ITFASLPTGGNDLKRIRFSREMYNKWQAQRRWGENYDKIVELYNVQRFNRQA--LQTPAR 71
Query: 208 SEDES------SRIESARDSPATPPLSKERLPRHLHQPMGMGYSSSDSLDHHQRQPQPRY 261
S+D+S S+++SAR+ SK+ PRH +P G S+ HH Y
Sbjct: 72 SDDQSQRDSTYSKMDSARE-------SKDWTPRHNFRPPG-------SVPHHFYGGSSNY 117
Query: 262 ETSGLGSTPNLSTISVPKTERSSIEGSVRTSSSGEEDRSGELSISNASEMETEWVEQD 319
P + + RT++S +D S+SNASEM+ EW+E+D
Sbjct: 118 GPGSYHGGPPMD--------------AARTTTSSRDD---PPSMSNASEMQAEWIEED 158
>AT5G12350.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr5:3995789-4000545 FORWARD LENGTH=1075
Length = 1075
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 306 SNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEENRARIQE 365
+N + E EWVEQDEPGVYIT+ AL GGAR+L+RVRFSR++F E+ A WW +NR R+ E
Sbjct: 1000 TNEARNEKEWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEIQAEQWWADNRGRVYE 1059
Query: 366 QY 367
QY
Sbjct: 1060 QY 1061
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 24/185 (12%)
Query: 22 EEAVQTPSTKQAIKALTAQIKDMAVKASGAYXXXXXXXXXXXXXXXXXYADSDVGSDSAR 81
EE + + K+ IK+LTAQ+KDMA + + GS R
Sbjct: 911 EETTRCKAAKEVIKSLTAQLKDMAERLPVGSARTVKSPPSL----------NSFGSSPGR 960
Query: 82 ---FHMAYHRTGSSNSTPRMWGKEMEARLKGLSSGEGTPASVSGRTESVMLTEEDEPREW 138
F++ ++ S S P M S+G TPA +G + E +EW
Sbjct: 961 IDPFNI-LNQANSQESEPNGITTPM------FSNGTMTPAFGNGEATN----EARNEKEW 1009
Query: 139 IAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFDQN 198
+ Q EPGV IT +L G DLKR+RFSR+ F++ QA++WWA+N +V E YNV+ D+
Sbjct: 1010 VEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEIQAEQWWADNRGRVYEQYNVRMVDKA 1069
Query: 199 AVPLP 203
+ LP
Sbjct: 1070 SEDLP 1074
>AT5G19420.2 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr5:6547945-6552981 REVERSE LENGTH=1139
Length = 1139
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 45/56 (80%)
Query: 312 ETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEENRARIQEQY 367
E EWVEQDEPGVYIT+ AL GGAR+L+RVRFSR++F E A WW ENR R+ EQY
Sbjct: 1064 ENEWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEKQAEEWWAENRGRVYEQY 1119
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 89/191 (46%), Gaps = 36/191 (18%)
Query: 22 EEAVQTPSTKQAIKALTAQIKDMAVKASGAYXXXXXXXXXXXXXXXXXYADSDVGSDSAR 81
EE+ + + K+ IK+LTAQ+KDMA + YA
Sbjct: 949 EESARCKAAKEVIKSLTAQLKDMAERLPVGSARTVKSPSLNSFGSSPDYA---------- 998
Query: 82 FHMAYHRTGSSNSTPRMWGKEMEA----RLKGLSSGEGTPASVSGR--------TESV-- 127
SSN+ R +E ++ + S+G TP SG E++
Sbjct: 999 -------APSSNTLNRPNSRETDSDSLTTVPMFSNGTSTPVFDSGSYRQQANHAAEAINR 1051
Query: 128 --MLTEEDEPR---EWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAEN 182
++E EPR EW+ Q EPGV IT +L G DLKR+RFSR+ F++ QA+ WWAEN
Sbjct: 1052 ISTRSKESEPRNENEWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEKQAEEWWAEN 1111
Query: 183 YDKVMELYNVQ 193
+V E YNV+
Sbjct: 1112 RGRVYEQYNVR 1122
>AT5G19420.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr5:6547945-6552866 REVERSE LENGTH=1105
Length = 1105
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 45/56 (80%)
Query: 312 ETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEENRARIQEQY 367
E EWVEQDEPGVYIT+ AL GGAR+L+RVRFSR++F E A WW ENR R+ EQY
Sbjct: 1030 ENEWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEKQAEEWWAENRGRVYEQY 1085
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 89/191 (46%), Gaps = 36/191 (18%)
Query: 22 EEAVQTPSTKQAIKALTAQIKDMAVKASGAYXXXXXXXXXXXXXXXXXYADSDVGSDSAR 81
EE+ + + K+ IK+LTAQ+KDMA + YA
Sbjct: 915 EESARCKAAKEVIKSLTAQLKDMAERLPVGSARTVKSPSLNSFGSSPDYA---------- 964
Query: 82 FHMAYHRTGSSNSTPRMWGKEMEA----RLKGLSSGEGTPASVSGR--------TESV-- 127
SSN+ R +E ++ + S+G TP SG E++
Sbjct: 965 -------APSSNTLNRPNSRETDSDSLTTVPMFSNGTSTPVFDSGSYRQQANHAAEAINR 1017
Query: 128 --MLTEEDEPR---EWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAEN 182
++E EPR EW+ Q EPGV IT +L G DLKR+RFSR+ F++ QA+ WWAEN
Sbjct: 1018 ISTRSKESEPRNENEWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEKQAEEWWAEN 1077
Query: 183 YDKVMELYNVQ 193
+V E YNV+
Sbjct: 1078 RGRVYEQYNVR 1088
>AT1G69710.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr1:26222325-26226530 FORWARD LENGTH=1041
Length = 1041
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 131 EEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELY 190
+ D+P E + Q EPGV +T +SLP GG +LKR+RFSR+ F + QA++WW EN KV E +
Sbjct: 978 QNDKP-EKVVQDEPGVYLTLLSLPGGGTELKRVRFSRKQFTEEQAEKWWGENGAKVCERH 1036
Query: 191 NV 192
N+
Sbjct: 1037 NI 1038
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 314 EWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEENRARIQEQY 367
E V QDEPGVY+T+ +LPGG EL+RVRFSR++F E A WW EN A++ E++
Sbjct: 983 EKVVQDEPGVYLTLLSLPGGGTELKRVRFSRKQFTEEQAEKWWGENGAKVCERH 1036
>AT1G65920.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr1:24525267-24529204 REVERSE LENGTH=1006
Length = 1006
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 314 EWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEENRARIQEQY 367
E VEQ EPGVYIT ALP G + L+RVRFSR++F E A+ WWEE + + +Y
Sbjct: 949 EQVEQYEPGVYITFTALPCGQKTLKRVRFSRKRFSEKEAQRWWEEKQVLVYNKY 1002
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 132 EDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYN 191
+D E + Q EPGV ITF +LP G LKR+RFSR+ F++ +AQRWW E V Y+
Sbjct: 944 QDSSAEQVEQYEPGVYITFTALPCGQKTLKRVRFSRKRFSEKEAQRWWEEKQVLVYNKYD 1003
Query: 192 VQ 193
+
Sbjct: 1004 AE 1005
>AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:28906952-28911325 FORWARD LENGTH=1103
Length = 1103
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 297 EDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWW 356
++ S + ++N +++E EW+EQ EPGVYIT+ AL G R+LRRVRFSR +FGE A WW
Sbjct: 1007 DNGSSQTGVNNTNQVEAEWIEQYEPGVYITLVALHDGTRDLRRVRFSRRRFGEHQAETWW 1066
Query: 357 EENRARIQEQY 367
ENR ++ E+Y
Sbjct: 1067 SENREKVYEKY 1077
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 137 EWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFD 196
EWI Q EPGV IT V+L G DL+R+RFSR F + QA+ WW+EN +KV E YNV+ +
Sbjct: 1024 EWIEQYEPGVYITLVALHDGTRDLRRVRFSRRRFGEHQAETWWSENREKVYEKYNVRVSE 1083
Query: 197 QNAVPLPTPPRSEDE 211
++ R E+E
Sbjct: 1084 KSTASQTHRDRDEEE 1098
>AT5G42140.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr5:16837547-16841640 REVERSE LENGTH=1073
Length = 1073
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 310 EMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEENRARIQEQY 367
++E EW+EQ EPGVYIT+ AL G R+L+RVRFSR +F E A WW ENR R+ E+Y
Sbjct: 996 QVEAEWIEQYEPGVYITLLALGDGTRDLKRVRFSRRRFREQQAETWWSENRERVYEKY 1053
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 137 EWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFD 196
EWI Q EPGV IT ++L G DLKR+RFSR F + QA+ WW+EN ++V E YN++ D
Sbjct: 1000 EWIEQYEPGVYITLLALGDGTRDLKRVRFSRRRFREQQAETWWSENRERVYEKYNIRGTD 1059
Query: 197 QNAVPLPTPPRSEDE 211
+++V T P S+ +
Sbjct: 1060 RSSV--ATSPISQSQ 1072
>AT4G16990.5 | Symbols: RLM3 | disease resistance protein (TIR-NBS
class), putative | chr4:9561113-9565225 FORWARD
LENGTH=637
Length = 637
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 37/251 (14%)
Query: 136 REWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRF 195
+E I EP V IT G K + SR + A+ WW EN +KV E +N
Sbjct: 380 KEKIEYCEPHVYITPAIFSDGTRAPKYVESSRRVTQVHHAKTWWPENCEKVYENHN---- 435
Query: 196 DQNAVPLPTPPRSEDESSRIESARDSPATPPLSKERLPRHLHQPMGMGYSSSDSL----D 251
+ RS D + E K+ Q G SS+ L D
Sbjct: 436 -----NIYGIDRSIDGGDKFEGKSKVSDGGLDGKD-------QGSMYGQSSNSELQINMD 483
Query: 252 HHQRQPQP----RYETSGLGSTPNLSTISV--PKTER---SSIEGS------VRTSSSGE 296
R+ +P ++ + S L+ ++ P+++R +S++ +RT S
Sbjct: 484 ADNRRCEPVSEMLFKNYNVCSPNGLTDVNCSNPQSQRKLDASLKKDKIVHEWIRTGSGFF 543
Query: 297 EDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWW 356
D G SI +A++++ + E E GVYIT+ L GG L+ + FSR + A++WW
Sbjct: 544 FDFQGPKSIVSAAQVDEKNFEYCEQGVYITLGILSGGIIVLKHLEFSRRMAQQ--AKVWW 601
Query: 357 EENRARIQEQY 367
EN ++ +++
Sbjct: 602 SENWIKVYQEH 612
>AT4G16990.3 | Symbols: RLM3 | disease resistance protein (TIR-NBS
class), putative | chr4:9561113-9565225 FORWARD
LENGTH=638
Length = 638
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 38/252 (15%)
Query: 136 REWIAQVEPGVLITFVSLPQGGNDLKRIRFS-REMFNKWQAQRWWAENYDKVMELYNVQR 194
+E I EP V IT G K + S R + A+ WW EN +KV E +N
Sbjct: 380 KEKIEYCEPHVYITPAIFSDGTRAPKYVESSSRRVTQVHHAKTWWPENCEKVYENHN--- 436
Query: 195 FDQNAVPLPTPPRSEDESSRIESARDSPATPPLSKERLPRHLHQPMGMGYSSSDSL---- 250
+ RS D + E K+ Q G SS+ L
Sbjct: 437 ------NIYGIDRSIDGGDKFEGKSKVSDGGLDGKD-------QGSMYGQSSNSELQINM 483
Query: 251 DHHQRQPQP----RYETSGLGSTPNLSTISV--PKTER---SSIEGS------VRTSSSG 295
D R+ +P ++ + S L+ ++ P+++R +S++ +RT S
Sbjct: 484 DADNRRCEPVSEMLFKNYNVCSPNGLTDVNCSNPQSQRKLDASLKKDKIVHEWIRTGSGF 543
Query: 296 EEDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLW 355
D G SI +A++++ + E E GVYIT+ L GG L+ + FSR + A++W
Sbjct: 544 FFDFQGPKSIVSAAQVDEKNFEYCEQGVYITLGILSGGIIVLKHLEFSRRMAQQ--AKVW 601
Query: 356 WEENRARIQEQY 367
W EN ++ +++
Sbjct: 602 WSENWIKVYQEH 613
>AT3G23270.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr3:8316436-8320337 FORWARD LENGTH=1045
Length = 1045
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 317 EQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEENRARIQEQY 367
EQ EPGVY+T G + RRVRFS+++F E A WW +N+ R+ + Y
Sbjct: 952 EQFEPGVYVTYEVDMNGNKIFRRVRFSKKRFDEHQAEDWWTKNKDRLLKCY 1002
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 141 QVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFDQNAV 200
Q EPGV +T+ G +R+RFS++ F++ QA+ WW +N D++++ Y+ ++
Sbjct: 953 QFEPGVYVTYEVDMNGNKIFRRVRFSKKRFDEHQAEDWWTKNKDRLLKCYSSNSSSSSSS 1012
Query: 201 PLPTPPRSEDESSRIESARDSPATP 225
PT A DSP P
Sbjct: 1013 SNPT-------------ASDSPVAP 1024
>AT4G16990.2 | Symbols: RLM3 | disease resistance protein (TIR-NBS
class), putative | chr4:9560155-9565225 FORWARD
LENGTH=796
Length = 796
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 38/252 (15%)
Query: 136 REWIAQVEPGVLITFVSLPQGGNDLKRIRFS-REMFNKWQAQRWWAENYDKVMELYNVQR 194
+E I EP V IT G K + S R + A+ WW EN +KV E +N
Sbjct: 538 KEKIEYCEPHVYITPAIFSDGTRAPKYVESSSRRVTQVHHAKTWWPENCEKVYENHN--- 594
Query: 195 FDQNAVPLPTPPRSEDESSRIESARDSPATPPLSKERLPRHLHQPMGMGYSSSDSL---- 250
+ RS D + E K+ Q G SS+ L
Sbjct: 595 ------NIYGIDRSIDGGDKFEGKSKVSDGGLDGKD-------QGSMYGQSSNSELQINM 641
Query: 251 DHHQRQPQP----RYETSGLGSTPNLSTISV--PKTER---SSIEGS------VRTSSSG 295
D R+ +P ++ + S L+ ++ P+++R +S++ +RT S
Sbjct: 642 DADNRRCEPVSEMLFKNYNVCSPNGLTDVNCSNPQSQRKLDASLKKDKIVHEWIRTGSGF 701
Query: 296 EEDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLW 355
D G SI +A++++ + E E GVYIT+ L GG L+ + FSR + A++W
Sbjct: 702 FFDFQGPKSIVSAAQVDEKNFEYCEQGVYITLGILSGGIIVLKHLEFSRRMAQQ--AKVW 759
Query: 356 WEENRARIQEQY 367
W EN ++ +++
Sbjct: 760 WSENWIKVYQEH 771
>AT4G16990.4 | Symbols: RLM3 | disease resistance protein (TIR-NBS
class), putative | chr4:9561113-9565225 FORWARD
LENGTH=643
Length = 643
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 49/260 (18%)
Query: 136 REWIAQVEPGVLITFVSLPQGGNDLKRIRFS-REMFNKWQAQRWWAENYDKVME----LY 190
+E I EP V IT G K + S R + A+ WW EN +KV E +Y
Sbjct: 380 KEKIEYCEPHVYITPAIFSDGTRAPKYVESSSRRVTQVHHAKTWWPENCEKVYENHNNIY 439
Query: 191 NVQR-------FDQNAVPLPTPPRSEDESS----------RIESARDSPATPPLSKERLP 233
+ R F+ + +D+ S +I D+ P+S+
Sbjct: 440 GIDRSIDGGDKFEGKSKVSDGGLDGKDQGSMYGQSSNSELQINMDADNRRCEPVSEMLFK 499
Query: 234 RH------LHQPMGMGYSSSDSLDHHQRQPQPRYETSGLGSTPNLSTISVPKTERSSIEG 287
+ H P G+ D + PQ + + S+ K + +
Sbjct: 500 NYNVCSPNAHMPAGL-------TDVNCSNPQSQRKLDA----------SLKKDK--IVHE 540
Query: 288 SVRTSSSGEEDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKF 347
+RT S D G SI +A++++ + E E GVYIT+ L GG L+ + FSR
Sbjct: 541 WIRTGSGFFFDFQGPKSIVSAAQVDEKNFEYCEQGVYITLGILSGGIIVLKHLEFSRRMA 600
Query: 348 GEVHARLWWEENRARIQEQY 367
+ A++WW EN ++ +++
Sbjct: 601 QQ--AKVWWSENWIKVYQEH 618