Miyakogusa Predicted Gene

Lj3g3v2634530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2634530.1 Non Chatacterized Hit- tr|A3AJ03|A3AJ03_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,62.16,7e-18,DUF1313,Protein of unknown function
DUF1313,CUFF.44318.1
         (114 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17455.2 | Symbols: ELF4-L4 | ELF4-like 4 | chr1:5997932-5998...   160   2e-40
AT1G17455.1 | Symbols: ELF4-L4 | ELF4-like 4 | chr1:5997932-5998...   160   2e-40
AT1G72630.1 | Symbols: ELF4-L2 | ELF4-like 2 | chr1:27344988-273...   151   8e-38
AT2G06255.1 | Symbols: ELF4-L3 | ELF4-like 3 | chr2:2459336-2459...   129   3e-31
AT2G40080.1 | Symbols: ELF4 | Protein of unknown function (DUF13...    73   3e-14
AT2G29950.1 | Symbols: ELF4-L1 | ELF4-like 1 | chr2:12767790-127...    71   1e-13

>AT1G17455.2 | Symbols: ELF4-L4 | ELF4-like 4 | chr1:5997932-5998276
           FORWARD LENGTH=114
          Length = 114

 Score =  160 bits (405), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 77/114 (67%), Positives = 92/114 (80%)

Query: 1   MDGDIFGELGNTSQVDSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRNV 60
           M+GD+    G+   +D +++Q FQKS +  QDIL+QNR+LINEINQNHESK PDNL RNV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61  GLIKELNSNIRRVVDLYADISSSFTKSQEASSEGDSSGTLKSDGKVNQKRIRSG 114
           GLIKELN+NIRRV  LY D+S SF +S +ASSEG+SSGTLKSDGK NQKR RSG
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFRSG 114


>AT1G17455.1 | Symbols: ELF4-L4 | ELF4-like 4 | chr1:5997932-5998276
           FORWARD LENGTH=114
          Length = 114

 Score =  160 bits (405), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 77/114 (67%), Positives = 92/114 (80%)

Query: 1   MDGDIFGELGNTSQVDSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRNV 60
           M+GD+    G+   +D +++Q FQKS +  QDIL+QNR+LINEINQNHESK PDNL RNV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61  GLIKELNSNIRRVVDLYADISSSFTKSQEASSEGDSSGTLKSDGKVNQKRIRSG 114
           GLIKELN+NIRRV  LY D+S SF +S +ASSEG+SSGTLKSDGK NQKR RSG
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFRSG 114


>AT1G72630.1 | Symbols: ELF4-L2 | ELF4-like 2 |
           chr1:27344988-27345347 FORWARD LENGTH=119
          Length = 119

 Score =  151 bits (382), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 74/115 (64%), Positives = 92/115 (80%), Gaps = 1/115 (0%)

Query: 1   MDGDIFGELGNTSQVDSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRNV 60
           M+GD++   G   Q+D +++Q FQKS +Q QDIL+QNR+LINEINQNHESK  D+L RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIKELNSNIRRVVDLYADISSSFTKSQEASSEGDSSGTLKSDGKV-NQKRIRSG 114
           GLI+ELN+NIR V  LY D+S SF +S +ASSEG+S+GTLKSDGK  NQKR RSG
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTGTLKSDGKANNQKRFRSG 119


>AT2G06255.1 | Symbols: ELF4-L3 | ELF4-like 3 | chr2:2459336-2459665
           FORWARD LENGTH=109
          Length = 109

 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/115 (57%), Positives = 89/115 (77%), Gaps = 7/115 (6%)

Query: 1   MDGDIFGEL-GNTSQVDSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRN 59
           M+GD    + G+  Q+D +++Q F+KS +Q Q+IL+ NR+LINEINQNHESK+PDNL RN
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 60  VGLIKELNSNIRRVVDLYADISSSFTKSQEASSEGDSSGTLKSDGKVNQKRIRSG 114
           VGLI+ELN+N+RRV  LY D+S++F+KS EASSEGDS     S+G+ N +RIR  
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDS-----SEGRGN-RRIRPA 109


>AT2G40080.1 | Symbols: ELF4 | Protein of unknown function
          (DUF1313) | chr2:16734545-16734880 REVERSE LENGTH=111
          Length = 111

 Score = 73.2 bits (178), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 53/70 (75%)

Query: 16 DSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRNVGLIKELNSNIRRVVD 75
          D  + +   ++  Q Q +L++NR LI ++N NH+S+M DN+S+NV LI+ELN NI +VV+
Sbjct: 22 DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 76 LYADISSSFT 85
          +Y+D+++SF+
Sbjct: 82 MYSDLNTSFS 91


>AT2G29950.1 | Symbols: ELF4-L1 | ELF4-like 1 |
           chr2:12767790-12768167 FORWARD LENGTH=125
          Length = 125

 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 49/71 (69%)

Query: 16  DSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRNVGLIKELNSNIRRVVD 75
           D  V         +AQ  L+QNR LI  +N+NH S++PDN+SRNVGLI E+N NI +V++
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 76  LYADISSSFTK 86
           +Y+D+S +F K
Sbjct: 94  IYSDLSLNFAK 104