Miyakogusa Predicted Gene

Lj3g3v2591390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2591390.1 Non Chatacterized Hit- tr|I1KHB3|I1KHB3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22194
PE,78.51,0,seg,NULL; WRC,WRC; QLQ,Glutamine-Leucine-Glutamine, QLQ; no
description,Glutamine-Leucine-Glutamine,,CUFF.44306.1
         (339 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G13960.1 | Symbols: AtGRF5, GRF5 | growth-regulating factor 5...   206   1e-53
AT4G37740.1 | Symbols: AtGRF2, GRF2 | growth-regulating factor 2...   151   6e-37
AT2G06200.1 | Symbols: AtGRF6, GRF6 | growth-regulating factor 6...   150   8e-37
AT2G36400.1 | Symbols: AtGRF3, GRF3 | growth-regulating factor 3...   135   6e-32
AT2G22840.1 | Symbols: AtGRF1, GRF1 | growth-regulating factor 1...   134   7e-32
AT3G52910.1 | Symbols: AtGRF4, GRF4 | growth-regulating factor 4...   128   6e-30
AT5G53660.1 | Symbols: AtGRF7, GRF7 | growth-regulating factor 7...   107   1e-23
AT4G24150.1 | Symbols: AtGRF8, GRF8 | growth-regulating factor 8...    92   5e-19
AT2G45480.1 | Symbols: AtGRF9, GRF9 | growth-regulating factor 9...    80   2e-15

>AT3G13960.1 | Symbols: AtGRF5, GRF5 | growth-regulating factor 5 |
           chr3:4608526-4610160 FORWARD LENGTH=397
          Length = 397

 Score =  206 bits (525), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 87/124 (70%), Positives = 107/124 (86%), Gaps = 4/124 (3%)

Query: 1   MMSTASARNRS----PFTPTQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSVSSR 56
           MMS + +  R+    PFTPTQW+ELE QAL++KYMV+G P+PP+LIFSI+RSLD+S+ SR
Sbjct: 1   MMSLSGSSGRTIGRPPFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRSLDTSLVSR 60

Query: 57  LFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYADSKYCERHMHRGRNRSR 116
           L PH  +GWGC++MGFGRK DPEPGRCRRTDGKKWRCS+EAY DSKYCE+HMHRGRNR+R
Sbjct: 61  LLPHQSLGWGCYQMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRAR 120

Query: 117 KPVE 120
           K ++
Sbjct: 121 KSLD 124


>AT4G37740.1 | Symbols: AtGRF2, GRF2 | growth-regulating factor 2 |
           chr4:17725533-17727609 REVERSE LENGTH=535
          Length = 535

 Score =  151 bits (382), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 68/113 (60%), Positives = 82/113 (72%), Gaps = 4/113 (3%)

Query: 10  RSPFTPTQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSVSSRLFPHHPIGWGCFE 69
           + PFT TQW ELEQQAL++KY+    P+P  L+ SIK+S     S    P    GWG F 
Sbjct: 162 KGPFTLTQWAELEQQALIYKYITANVPVPSSLLISIKKSFYPYGS---LPPSSFGWGTFH 218

Query: 70  MGF-GRKVDPEPGRCRRTDGKKWRCSKEAYADSKYCERHMHRGRNRSRKPVEV 121
           +GF G  +DPEPGRCRRTDGKKWRCS++A  D KYCERH++RGR+RSRKPVEV
Sbjct: 219 LGFAGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEV 271


>AT2G06200.1 | Symbols: AtGRF6, GRF6 | growth-regulating factor 6 |
           chr2:2426340-2427255 FORWARD LENGTH=244
          Length = 244

 Score =  150 bits (380), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 84/122 (68%), Gaps = 15/122 (12%)

Query: 10  RSPFTPTQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSL-----------DSSVSSRLF 58
           R PFT +QW+ELE QALVFKY+    P+PP L+F IKR              S  S  L 
Sbjct: 4   RIPFTESQWEELENQALVFKYLAANMPVPPHLLFLIKRPFLFSSSSSSSSSSSFFSPTLS 63

Query: 59  PHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYADSKYCERHMHRGRNR--SR 116
           PH   GW  +EMG GRK+D EPGRCRRTDGKKWRCSKEAY DSKYCERHMHRG+NR  SR
Sbjct: 64  PH--FGWNVYEMGMGRKIDAEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSSSR 121

Query: 117 KP 118
           KP
Sbjct: 122 KP 123


>AT2G36400.1 | Symbols: AtGRF3, GRF3 | growth-regulating factor 3 |
           chr2:15270300-15272617 REVERSE LENGTH=398
          Length = 398

 Score =  135 bits (339), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 65/118 (55%), Positives = 80/118 (67%), Gaps = 15/118 (12%)

Query: 13  FTPTQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSVSSRLFPHHPI--------G 64
           F+  QWQELE QAL+++YM+ G  +P +L+  IK+SL   +S   F HHP+         
Sbjct: 77  FSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSL-LHLSPSYFLHHPLQHLPHYQPA 135

Query: 65  WGCFEMGFGRK-VDPEPGRCRRTDGKKWRCSKEAYADSKYCERHMHRGRNRSRKPVEV 121
           W       GR  +DPEPGRCRRTDGKKWRCS++ +A  KYCERHMHRGRNRSRKPVE 
Sbjct: 136 WY-----LGRAAMDPEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNRSRKPVET 188


>AT2G22840.1 | Symbols: AtGRF1, GRF1 | growth-regulating factor 1 |
           chr2:9728841-9731141 FORWARD LENGTH=530
          Length = 530

 Score =  134 bits (338), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 82/112 (73%), Gaps = 4/112 (3%)

Query: 10  RSPFTPTQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSVSSRLFPHHPIGWGCFE 69
           + PF+ TQW ELEQQAL++KY+    P+P  L+ S+K+S     S    P +  GWG F 
Sbjct: 131 KGPFSLTQWAELEQQALIYKYITANVPVPSSLLLSLKKSFFPYGS---LPPNSFGWGSFH 187

Query: 70  MGF-GRKVDPEPGRCRRTDGKKWRCSKEAYADSKYCERHMHRGRNRSRKPVE 120
           +GF G  +DPEPGRCRRTDGKKWRCS++A  D KYCERH++RGR+RSRKPVE
Sbjct: 188 LGFSGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVE 239


>AT3G52910.1 | Symbols: AtGRF4, GRF4 | growth-regulating factor 4 |
           chr3:19616177-19618268 REVERSE LENGTH=380
          Length = 380

 Score =  128 bits (322), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 14/117 (11%)

Query: 13  FTPTQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSVSSRL--------FPHHPIG 64
           F+  QWQELE QAL+++YM+ G  +P +L+  IK+SL                FPHH   
Sbjct: 83  FSWAQWQELELQALIYRYMLAGASVPQELLLPIKKSLLHQSPMHFLHHPLQHSFPHHQPS 142

Query: 65  WGCFEMGFGR-KVDPEPGRCRRTDGKKWRCSKEAYADSKYCERHMHRGRNRSRKPVE 120
           W      +GR  +DPEPGRC+RTDGKKWRCS++  A  KYC+RH+HRGRNRSRKPVE
Sbjct: 143 WY-----WGRGAMDPEPGRCKRTDGKKWRCSRDVVAGHKYCDRHIHRGRNRSRKPVE 194


>AT5G53660.1 | Symbols: AtGRF7, GRF7 | growth-regulating factor 7 |
           chr5:21794636-21795929 FORWARD LENGTH=365
          Length = 365

 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 17/109 (15%)

Query: 12  PFTPTQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSVSSRLFPHHPIGWGCFEMG 71
           PFT  Q +ELE+QA+++KYM+   P+P DL+ S   S     +  +              
Sbjct: 59  PFTNAQLKELERQAMIYKYMIASIPVPFDLLVSSPSSASPCNNKNI-------------- 104

Query: 72  FGRKVDPEPGRCRRTDGKKWRCSKEAYADSKYCERHMHRGRNRSRKPVE 120
                D EPGRCRRTDGKKWRC+KE  ++ KYCE+H+HRGR RSRK VE
Sbjct: 105 ---AGDLEPGRCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRSRKHVE 150


>AT4G24150.1 | Symbols: AtGRF8, GRF8 | growth-regulating factor 8 |
           chr4:12535972-12539387 FORWARD LENGTH=493
          Length = 493

 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 29/139 (20%)

Query: 11  SPFTPTQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSVSSRL------------- 57
           + F+  QW ELE+Q  ++KYM+   P+PP+L+    ++  S+ +  +             
Sbjct: 148 AAFSEAQWHELERQRNIYKYMMASVPVPPELLTPFPKNHQSNTNPDVDTYRSGMFSIYAD 207

Query: 58  FPHHPIG-W----------GCFEMGFG-----RKVDPEPGRCRRTDGKKWRCSKEAYADS 101
           + + P+  W          G  ++G          D EP RC+RTDGKKWRCS+    D 
Sbjct: 208 YKNLPLSMWMTVTVAVATGGSLQLGIASSASNNTADLEPWRCKRTDGKKWRCSRNVIPDQ 267

Query: 102 KYCERHMHRGRNRSRKPVE 120
           KYCERH H+ R RSRK VE
Sbjct: 268 KYCERHTHKSRPRSRKHVE 286


>AT2G45480.1 | Symbols: AtGRF9, GRF9 | growth-regulating factor 9 |
           chr2:18745583-18747403 FORWARD LENGTH=429
          Length = 429

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 60/111 (54%), Gaps = 1/111 (0%)

Query: 8   RNRSPFT-PTQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSVSSRLFPHHPIGWG 66
           RN+ P+    Q  E   QALV++Y+  G  +P  L+  I  SL  S SS    H      
Sbjct: 17  RNKWPWMKAAQLMEFRMQALVYRYIEAGLRVPHHLVVPIWNSLALSSSSNYNYHSSSLLS 76

Query: 67  CFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYADSKYCERHMHRGRNRSRK 117
              +     ++ EP RCRRTDGKKWRCS       KYCERHMHRGR RSRK
Sbjct: 77  NKGVTHIDTLETEPTRCRRTDGKKWRCSNTVLLFEKYCERHMHRGRKRSRK 127



 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 2/55 (3%)

Query: 66  GCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYADSKYCERHMHRGRNRSRKPVE 120
           GCF +  G + D EPGRCRRTDGKKWRCSK+  +  KYC++HMHRG  + + PV+
Sbjct: 295 GCFRLQ-GVETDNEPGRCRRTDGKKWRCSKDVLSGQKYCDKHMHRGMKK-KHPVD 347