Miyakogusa Predicted Gene

Lj3g3v2591380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2591380.1 Non Chatacterized Hit- tr|I1MK02|I1MK02_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,45.1,6e-19,seg,NULL,CUFF.44305.1
         (135 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G54215.1 | Symbols:  | proline-rich family protein | chr1:202...    46   6e-06

>AT1G54215.1 | Symbols:  | proline-rich family protein |
           chr1:20243118-20243627 FORWARD LENGTH=169
          Length = 169

 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/38 (57%), Positives = 29/38 (76%)

Query: 92  MNAGKKVGLLFVGIAAIMQVFMVGFLVHKRRQLLKAND 129
           +N GK VGL+FVG+ A++QV +V FLV KR+QLL   D
Sbjct: 130 LNKGKTVGLVFVGLIAMLQVIVVVFLVFKRKQLLSLKD 167