Miyakogusa Predicted Gene

Lj3g3v2576770.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2576770.1 Non Chatacterized Hit- tr|K4CE63|K4CE63_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,48.89,0.000000000000008,G-gamma,G-protein gamma-like domain;
coiled-coil,NULL; seg,NULL,CUFF.44287.1
         (138 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G20635.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    74   4e-14

>AT5G20635.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           keratin filament, chloroplast; CONTAINS InterPro
           DOMAIN/s: Keratin, high sulphur B2 protein
           (InterPro:IPR002494); Has 6153 Blast hits to 2882
           proteins in 265 species: Archae - 6; Bacteria - 47;
           Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30;
           Other Eukaryotes - 1038 (source: NCBI BLink). |
           chr5:6979314-6981767 REVERSE LENGTH=251
          Length = 251

 Score = 73.6 bits (179), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 1/74 (1%)

Query: 15  FVDFHGKRKQMVKIQVLEREIGVLQEELKSLEGLHPASRCCKELDAFVGSISDPFTPIRK 74
           + D +GKR++  ++Q+LEREIG L+ E+K +EG+ PASRC KE+  FV + SDP  P ++
Sbjct: 41  YPDLYGKRREAARVQMLEREIGFLEGEIKFIEGVQPASRCIKEVSDFVVANSDPLIPAQR 100

Query: 75  ESDTESHHFRKQIC 88
           +S   S  F K +C
Sbjct: 101 KS-RRSFRFWKWLC 113