Miyakogusa Predicted Gene

Lj3g3v2576520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2576520.1 Non Chatacterized Hit- tr|B9T3B1|B9T3B1_RICCO
Serine/threonine-protein kinase PBS1, putative
OS=Rici,46.88,0.0000000000002, ,CUFF.44255.1
         (91 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G20690.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    53   4e-08
AT5G35390.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    45   7e-06

>AT5G20690.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr5:7002453-7004551 FORWARD LENGTH=659
          Length = 659

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 29/36 (80%)

Query: 1   MGEMEKLLHIGAACTESNPQKRLDMAEAVRRIEEIK 36
           M +M +LL +GAAC  SNP +RLDM EAVRRIE++K
Sbjct: 623 MRQMVELLRVGAACIASNPDERLDMREAVRRIEQVK 658


>AT5G35390.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr5:13596918-13598976 FORWARD LENGTH=662
          Length = 662

 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query: 2   GEMEKLLHIGAACTESNPQKRLDMAEAVRRIEEIKGKGGQESRTIEVLPSPTDG 55
           G++ KLL IG  C E + +KRLD+ +AV +IEE+K + G +        S TDG
Sbjct: 595 GQILKLLTIGLNCCEPDVEKRLDIGQAVEKIEELKEREGDDDDFYSTYVSETDG 648