Miyakogusa Predicted Gene

Lj3g3v2576220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2576220.1 Non Chatacterized Hit- tr|G7L8C1|G7L8C1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,53.61,0.00000000002,no description,DNA-binding SAP; no
description,NULL; seg,NULL; CCCH zinc finger,NULL; SAP
domain,NUL,CUFF.44233.1
         (497 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66840.1 | Symbols:  | SAP domain-containing protein | chr5:2...   213   2e-55

>AT5G66840.1 | Symbols:  | SAP domain-containing protein |
           chr5:26692922-26695296 REVERSE LENGTH=551
          Length = 551

 Score =  213 bits (543), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 103/177 (58%), Positives = 126/177 (71%), Gaps = 3/177 (1%)

Query: 87  VQKTINAGL-LEKLKVDECKLYLRKNGLRLTGNKATLIQRIKEHLEIVNGEGEKKYPPSS 145
           V + + AG  L+ + V ECK YLRK+GLRL+G K   I RI EH  I +G GE  YP SS
Sbjct: 80  VTRLLTAGSDLKSVNVKECKAYLRKHGLRLSGTKPVCIDRILEHWRIKDGTGEAVYPKSS 139

Query: 146 FVLNCKGDACTGDVVLFEQNVYEMFSIASRSATGPPCGKRTVAGRIVKESYGAAKQQHTF 205
           F +NCKGD C GD+VLF Q V+  +    +S  G   G+RTVAG++VKESYG AKQQHTF
Sbjct: 140 FAINCKGDVCKGDIVLFTQKVHHKYEKMKKS--GNIMGRRTVAGQVVKESYGTAKQQHTF 197

Query: 206 TIEVLWSKGEKPLRPLYPLLIKGRNLYRLKTLRQKWEDEGKRQQILMEKHSRGFVAR 262
           TIEVLW +G + L PLYPLL+KGRNLYRL TLRQ+W +E  R ++L EKH+RG  AR
Sbjct: 198 TIEVLWCEGTQKLPPLYPLLVKGRNLYRLMTLRQRWPNEEDRVKVLNEKHNRGAAAR 254