Miyakogusa Predicted Gene

Lj3g3v2575990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2575990.1 tr|G7KAU4|G7KAU4_MEDTR CCAAT/enhancer-binding
protein zeta OS=Medicago truncatula GN=MTR_5g019130
PE,70.53,0,CCAAT-BINDING FACTOR-RELATED,NULL; ARM
repeat,Armadillo-type fold; no description,Armadillo-like
hel,CUFF.44217.1
         (641 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G72440.1 | Symbols: EDA25, SWA2 | CCAAT-binding factor | chr1...   698   0.0  

>AT1G72440.1 | Symbols: EDA25, SWA2 | CCAAT-binding factor |
           chr1:27268325-27273596 REVERSE LENGTH=1043
          Length = 1043

 Score =  698 bits (1802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/589 (61%), Positives = 439/589 (74%), Gaps = 28/589 (4%)

Query: 8   KPSQPTEGDVDTLKSDIASFASQLGLSTSQSYSGFNDVDFRKT----------------- 50
           KP   +  D+  L SDIASFAS +GL+++   SGFND DFRK                  
Sbjct: 5   KPLSKSSQDLSLLTSDIASFASSIGLASALPSSGFNDTDFRKPAKSKTQKRKKPKKDQQH 64

Query: 51  KPNTEKATPQNT---QKPKNDTNRPHEHXXXXXXXXXXXXXXXXXXXXXXDDANKDKGFN 107
           K   E+  P++    +K K+   R                              K K F+
Sbjct: 65  KDEDEEGEPKSNIGNEKGKDFGARKQNKDAPVKQTLQPKPKPGFLSIDDESTGYKKKRFD 124

Query: 108 NFKSLPKLPLMKASVLGV-WFEEAVELEAKVIGEGKKAEIRNVGEWKSLVQKKKELGQRL 166
            FKSLPKLPL+KAS+L   W+ +A E E KV G G+K  + N  ++K +V+KK+ELG+RL
Sbjct: 125 EFKSLPKLPLVKASLLSSEWYNDAAEFEEKVFG-GRKVAVANKEDFKGVVEKKRELGERL 183

Query: 167 MAQYAQDYEATRGKSSDIKMLITTQRSGTAADKVSAFSVLVGDNPIANLRALDALLGMVT 226
           M QYA+D+  ++GK  D+KM+I+ Q+SGT ADK++AF ++VG+NPIAN+R+LDALLGMVT
Sbjct: 184 MWQYAEDFATSKGKGGDMKMVISAQKSGTVADKITAFEIMVGENPIANMRSLDALLGMVT 243

Query: 227 SKVGKRHALTGFEALQELFIASLLPDRKLKTLIQRPLNHITETKDGYSLLLFWYWEECLK 286
           SKVGKR A  G +AL E+ I  LLPDRKLK+L+QRPLN I E KDGYSLLLFWYWE+CLK
Sbjct: 244 SKVGKRFAFKGLKALSEILI-RLLPDRKLKSLLQRPLNIIPENKDGYSLLLFWYWEDCLK 302

Query: 287 QRYERFVVALEEASRDMLPALKSKALKAIYMLLSRKSEQERKLLSALVNKLGDPDTKAAS 346
           QRYERFV AL+E+S+DMLP LK KALK IY +L+ KSEQERKLL +LVNKLGDP  K+AS
Sbjct: 303 QRYERFVTALDESSKDMLPELKDKALKTIYFMLTSKSEQERKLLVSLVNKLGDPQNKSAS 362

Query: 347 NADYHLTNLLSDHPIMKAVVIEEVDSFLFRPHLGPRSQYHTVNFLSQIRLSNKGDGPKVA 406
           NADYHLTNLL+DHP MKAVVI+EVDSFLFRPHLG R++YH VNFLSQIRLS+KG+ PKVA
Sbjct: 363 NADYHLTNLLADHPNMKAVVIDEVDSFLFRPHLGLRAKYHAVNFLSQIRLSHKGEDPKVA 422

Query: 407 KRLIDVYFALFKVMITKASSNGKSDKSG-----KPNPKEKKSNELSESHAELDSRLLSAL 461
           KRLIDVYFALFKV+ T+A+    +D  G     K NPK+ K    ++S  ELDSR+LSAL
Sbjct: 423 KRLIDVYFALFKVLTTEANRKQGADDKGAADKKKSNPKDTKQEVSTDSPIELDSRILSAL 482

Query: 462 LTGVNRAFPFVASIEADEIVDVQTPILFQLVHSKNFNVGVQALMLLDKISAKNQIASDRF 521
           LTGVNRAFP+V++ EAD+I++ QTP+LF+LVHS NFNVGVQ+LMLLDKIS+KN+I SDRF
Sbjct: 483 LTGVNRAFPYVSTDEADDIIESQTPVLFKLVHSANFNVGVQSLMLLDKISSKNKIVSDRF 542

Query: 522 YRALYSKLLLPAAMNTSKAEMFIALLLRAMKRDINIKRVAAFSKRLLQV 570
           YRALYSKLLLP+AMN+SKAEMFI LLLRAMK DINIKRVAAFSKR+LQV
Sbjct: 543 YRALYSKLLLPSAMNSSKAEMFIGLLLRAMKNDINIKRVAAFSKRVLQV 591