Miyakogusa Predicted Gene

Lj3g3v2542360.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2542360.2 Non Chatacterized Hit- tr|E1Z902|E1Z902_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,35.17,0.00000000000002,seg,NULL; Mit_KHE1,Protein of unknown
function DUF2343,CUFF.44156.2
         (274 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G53760.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   315   2e-86
AT1G53760.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   258   2e-69

>AT1G53760.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion,
           plasma membrane, plastid, membrane; EXPRESSED IN: 25
           plant structures; EXPRESSED DURING: 13 growth stages;
           CONTAINS InterPro DOMAIN/s: Protein of unknown function
           DUF2343 (InterPro:IPR018786); Has 171 Blast hits to 171
           proteins in 90 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 127; Plants - 41; Viruses - 0;
           Other Eukaryotes - 3 (source: NCBI BLink). |
           chr1:20069159-20070918 REVERSE LENGTH=272
          Length = 272

 Score =  315 bits (808), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 156/271 (57%), Positives = 196/271 (72%), Gaps = 5/271 (1%)

Query: 1   MRAKLIVFPIRGRNWCFSRSIDHTLXXXXXXXXXXXXIRDLWNNINVSDKPLNAKAELLI 60
           MRA+L+VFPI+G+ WCFSRS+D               +R LW  I+   KP+NA AELL+
Sbjct: 1   MRARLVVFPIKGKKWCFSRSVD-PFAAQSPSGVTPTTVRGLWKKISSESKPINANAELLV 59

Query: 61  DYASSKMNKAWVGLEMAPAGSLKKKIHGLGLWLLSRVKPSEIFLKSISKDVTGVEVIYPS 120
           D+ S KMNKAWVGLE AP GS+K KIHG GL LL+RVKPSEIFLKSISK+VT V+V YP 
Sbjct: 60  DFISDKMNKAWVGLEKAPDGSIKNKIHGFGLKLLARVKPSEIFLKSISKEVTSVQVTYPP 119

Query: 121 SLNAQLVRRRLRHIAMRGMIIHRKYFYGSVSLIPLTSALSVLPLPNVPFFWILFRTYSHW 180
           SL+ +LVRRRLRHIAM G I+H+KY  GSV+L+PLTSA  VLPLPN+PFFW+LFRTYSHW
Sbjct: 120 SLDPRLVRRRLRHIAMSGTILHKKYLVGSVTLLPLTSAFMVLPLPNIPFFWVLFRTYSHW 179

Query: 181 RALQGSEKLFQLVSDSHKTS--NTSTDKKETELKDPKNESHSSQEPYWVLQPSKELESLV 238
           RALQGSEKL +L+S+       +++ D  E++  + K E   SQ P  +L PS+EL  L+
Sbjct: 180 RALQGSEKLLKLISNEANPDKPDSTDDADESKNSNTKPE-QKSQSPTCILLPSEELYQLI 238

Query: 239 HQGDGHDGLCHHTILKICKIYDLNTIDVIKY 269
            +    +GL   TI++ICK +DLN  DV+KY
Sbjct: 239 REA-SEEGLDEATIIEICKSFDLNKNDVLKY 268


>AT1G53760.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion,
           plastid; EXPRESSED IN: 23 plant structures; EXPRESSED
           DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
           Protein of unknown function DUF2343
           (InterPro:IPR018786). | chr1:20069266-20070918 REVERSE
           LENGTH=212
          Length = 212

 Score =  258 bits (660), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 122/184 (66%), Positives = 144/184 (78%), Gaps = 1/184 (0%)

Query: 1   MRAKLIVFPIRGRNWCFSRSIDHTLXXXXXXXXXXXXIRDLWNNINVSDKPLNAKAELLI 60
           MRA+L+VFPI+G+ WCFSRS+D               +R LW  I+   KP+NA AELL+
Sbjct: 1   MRARLVVFPIKGKKWCFSRSVD-PFAAQSPSGVTPTTVRGLWKKISSESKPINANAELLV 59

Query: 61  DYASSKMNKAWVGLEMAPAGSLKKKIHGLGLWLLSRVKPSEIFLKSISKDVTGVEVIYPS 120
           D+ S KMNKAWVGLE AP GS+K KIHG GL LL+RVKPSEIFLKSISK+VT V+V YP 
Sbjct: 60  DFISDKMNKAWVGLEKAPDGSIKNKIHGFGLKLLARVKPSEIFLKSISKEVTSVQVTYPP 119

Query: 121 SLNAQLVRRRLRHIAMRGMIIHRKYFYGSVSLIPLTSALSVLPLPNVPFFWILFRTYSHW 180
           SL+ +LVRRRLRHIAM G I+H+KY  GSV+L+PLTSA  VLPLPN+PFFW+LFRTYSHW
Sbjct: 120 SLDPRLVRRRLRHIAMSGTILHKKYLVGSVTLLPLTSAFMVLPLPNIPFFWVLFRTYSHW 179

Query: 181 RALQ 184
           RALQ
Sbjct: 180 RALQ 183