Miyakogusa Predicted Gene

Lj3g3v2532280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2532280.1 Non Chatacterized Hit- tr|K3YZE7|K3YZE7_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si019655,36.29,0.00000004,LRRNT_2,Leucine-rich repeat-containing
N-terminal, type 2; LRR_1,Leucine-rich repeat; FAMILY NOT
NAM,CUFF.44155.1
         (220 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17240.1 | Symbols: AtRLP2, RLP2 | receptor like protein 2 | ...    77   1e-14
AT1G72300.1 | Symbols:  | Leucine-rich receptor-like protein kin...    74   9e-14
AT1G17250.1 | Symbols: AtRLP3, RLP3 | receptor like protein 3 | ...    71   6e-13
AT5G24100.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    53   1e-07

>AT1G17240.1 | Symbols: AtRLP2, RLP2 | receptor like protein 2 |
           chr1:5896528-5898717 REVERSE LENGTH=729
          Length = 729

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 80/175 (45%), Gaps = 10/175 (5%)

Query: 39  ICNQIDRDSLLEFSGNXXXXXXXXXXXXXXXXXXXXXXXXEGVTCD--GDQRVTHLLLPS 96
           +CN  DR+SL+ FSGN                        EG+TCD   D  VT + LPS
Sbjct: 45  VCNLQDRESLIWFSGNVSSSVSPLNWNLSIDCCSW-----EGITCDDSSDSHVTVISLPS 99

Query: 97  RGLFGVISPSLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXXXXXXXXSYNRLSGELP--- 153
           RGL G ++ S+ N+                    FFS          SYN  +GELP   
Sbjct: 100 RGLSGTLASSVQNIHRLSRLDLSYNRLSGPLPPGFFSTLDQLMILNLSYNSFNGELPLEQ 159

Query: 154 PFVADNSTSVVIQEVGLSSNLFNGTLPSSLLQHLAGGSLISFNVSNNSFTGQIPT 208
            F  +++    IQ + LSSNL  G +  S +      +LISFNVSNNSFTG IP+
Sbjct: 160 AFGNESNRFFSIQTLDLSSNLLEGEILRSSVYLQGTINLISFNVSNNSFTGPIPS 214


>AT1G72300.1 | Symbols:  | Leucine-rich receptor-like protein kinase
           family protein | chr1:27217679-27220966 REVERSE
           LENGTH=1095
          Length = 1095

 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 39  ICNQIDRDSLLEFSGNXXXXXXXXXXXXXXXXXXXXXXXXEGVTCDG--DQRVTHLLLPS 96
           +CN  DRDSLL FSGN                        EG++CD   + RVT ++L S
Sbjct: 47  VCNLQDRDSLLWFSGNVSSPVSPLHWNSSIDCCSW-----EGISCDKSPENRVTSIILSS 101

Query: 97  RGLFGVISPSLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXXXXXXXXSYNRLSGELP--- 153
           RGL G +  S+ +L                    F S          SYN   GELP   
Sbjct: 102 RGLSGNLPSSVLDLQRLSRLDLSHNRLSGPLPPGFLSALDQLLVLDLSYNSFKGELPLQQ 161

Query: 154 PFVADNSTSVVIQEVGLSSNLFNGTLPSSLLQHLAGGSLISFNVSNNSFTGQIPTSIFCT 213
            F   ++    IQ V LSSNL  G + SS +      +L SFNVSNNSFTG IP S  CT
Sbjct: 162 SFGNGSNGIFPIQTVDLSSNLLEGEILSSSVFLQGAFNLTSFNVSNNSFTGSIP-SFMCT 220


>AT1G17250.1 | Symbols: AtRLP3, RLP3 | receptor like protein 3 |
           chr1:5901169-5903439 REVERSE LENGTH=756
          Length = 756

 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 77/182 (42%), Gaps = 12/182 (6%)

Query: 33  VVQASLICNQIDRDSLLEFSGNXXXXXXXXXXXXXXXXXXXXXXXXEGVTCDG--DQRVT 90
           +  +  +CN  DR+SLL FSGN                        EG+TCD   D  +T
Sbjct: 45  IAVSEALCNSQDRESLLWFSGNVSSSVSPLNWNPSIDCCSW-----EGITCDDSPDSHIT 99

Query: 91  HLLLPSRGLFGVISPSLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXXXXXXXXSYNRLSG 150
            + LP R L+G +  S+  L                  S F S          SYN L G
Sbjct: 100 AISLPFRALYGKLPLSVLRLHHLSQLNLSHNRLSGHLPSGFLSALDQLKVLDLSYNSLDG 159

Query: 151 ELP---PFVADNSTSVVIQEVGLSSNLFNG-TLPSSLLQHLAGGSLISFNVSNNSFTGQI 206
           ELP    F   ++    I+ V LSSN   G  LPSS+        LISFNVS NSFTG I
Sbjct: 160 ELPVEQTFRNGSNRCFPIRIVDLSSNFLQGEILPSSIFMQ-GTFDLISFNVSKNSFTGSI 218

Query: 207 PT 208
           P+
Sbjct: 219 PS 220


>AT5G24100.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr5:8149216-8151191 FORWARD LENGTH=614
          Length = 614

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 80  GVTCDGD-QRVTHLLLPSRGLFGVISP-SLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXX 137
           GVTCD D  RVT L LP   L GVI P +++ L+                   F      
Sbjct: 64  GVTCDIDGTRVTALHLPGASLLGVIPPGTISRLSELQILSLRSNGLRGPFPIDFLQLKKL 123

Query: 138 XXXXXXSYNRLSGELPPFVADNSTSVVIQEVGLSSNLFNGTLPSSLLQHLAGGSLISFNV 197
                 + NR SG LP   +D +T   +  + L SN FNG++P+    +L G  L+S N+
Sbjct: 124 KAISLGN-NRFSGPLP---SDYATWTNLTVLDLYSNRFNGSIPAGF-ANLTG--LVSLNL 176

Query: 198 SNNSFTGQIP 207
           + NSF+G+IP
Sbjct: 177 AKNSFSGEIP 186