Miyakogusa Predicted Gene

Lj3g3v2531240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2531240.1 Non Chatacterized Hit- tr|I1MK92|I1MK92_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42528
PE,87.89,0,seg,NULL; SUBFAMILY NOT NAMED,NULL;
NULP1-RELATED,Transcription factor 25; Tcf25,Transcription
facto,CUFF.44145.1
         (353 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46900.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Basic heli...   426   e-120

>AT2G46900.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Basic
           helix-loop-helix, Nulp1-type (InterPro:IPR006994); Has
           2929 Blast hits to 2464 proteins in 333 species: Archae
           - 2; Bacteria - 151; Metazoa - 913; Fungi - 372; Plants
           - 141; Viruses - 47; Other Eukaryotes - 1303 (source:
           NCBI BLink). | chr2:19269678-19271987 FORWARD LENGTH=627
          Length = 627

 Score =  426 bits (1096), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 206/343 (60%), Positives = 251/343 (73%), Gaps = 13/343 (3%)

Query: 1   MAEYFKVLGEQQMSADSIARCLYALECAWNPMFTPLQGNCQLKYGHDTNKPIFTALFTHM 60
           MA+YFK +GE  M+ADSI +CLY LE AW+PMFTP QGNC+L++ HD NK  F  LFTHM
Sbjct: 270 MADYFKFVGENDMAADSIGKCLYGLERAWHPMFTPFQGNCRLEFNHDENKLFFKTLFTHM 329

Query: 61  KNLDRRGCHRSALEVCKLLLSLDADDPMGAIFCMDYFALRSEEYAWLEKFSEDYKSDNSI 120
           +N+DRRGCHRSALEVCKLLLSLD  +P+GA+FC+DYFALR+EEYAWLE+FSE+Y++DNS+
Sbjct: 330 RNMDRRGCHRSALEVCKLLLSLDTSNPVGALFCVDYFALRAEEYAWLEQFSEEYRNDNSL 389

Query: 121 WLFPNFSYSLAICRFYLER----EASKDACIDSDKASSSDLMKQALMLHPSVIKKLVTKV 176
           WLFPNFSYSLAI R YLE+     +S+    D+ K SS DLM QAL LHP+V+ KLV KV
Sbjct: 390 WLFPNFSYSLAIARVYLEKMEPTSSSEATPRDTSKQSSLDLMTQALKLHPTVLNKLVEKV 449

Query: 177 PLKERIWTDILKHTFFLSDQTGSPSQDHLISIYVERNYLIWRLPDLQKLLSGAAKLVIET 236
           PLK++ WT ILKH++F SD++  PS DHLI IYVERNYLIWRLPD+QKLL  AA LVIE+
Sbjct: 450 PLKDQAWTKILKHSYFRSDESKIPSLDHLIKIYVERNYLIWRLPDVQKLLRSAADLVIES 509

Query: 237 LESNKSELTDWACVRKEVFSSEKNEYGHXXXXXXXXXXXXIPPENLQQFMGVPGMREAMQ 296
           LE + +E   W CVR E FSSE N+Y H            +PP+NLQ F+  P M     
Sbjct: 510 LEQDGTEAESWLCVRLEAFSSENNQYSHLSTHDFSDSMPTLPPDNLQNFVADPRMVGG-- 567

Query: 297 DENQFANLPGNG--HAP---PREVANRNALAVLFESMLPWVTY 334
              Q A   G G   AP   PR++ANR+ LAVL ES+LPW  +
Sbjct: 568 --EQMAEGGGRGQHQAPPPRPRDLANRSPLAVLIESILPWANF 608