Miyakogusa Predicted Gene
- Lj3g3v2531230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2531230.1 Non Chatacterized Hit- tr|J9JB62|J9JB62_9SPIT
Membrane protein, putative OS=Oxytricha trifallax
PE=4,32.47,2e-18,DUF1295,Protein of unknown function DUF1295;
seg,NULL; S5A_REDUCTASE,3-oxo-5-alpha-steroid 4-dehydro,CUFF.44144.1
(335 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46890.1 | Symbols: | Protein of unknown function (DUF1295) ... 430 e-121
AT1G18180.1 | Symbols: | Protein of unknown function (DUF1295) ... 64 1e-10
AT1G73650.3 | Symbols: | Protein of unknown function (DUF1295) ... 59 5e-09
AT1G73650.2 | Symbols: | Protein of unknown function (DUF1295) ... 59 5e-09
AT1G73650.4 | Symbols: | Protein of unknown function (DUF1295) ... 55 5e-08
AT1G73650.1 | Symbols: | Protein of unknown function (DUF1295) ... 55 6e-08
>AT2G46890.1 | Symbols: | Protein of unknown function (DUF1295) |
chr2:19266879-19268134 REVERSE LENGTH=322
Length = 322
Score = 430 bits (1106), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/332 (63%), Positives = 259/332 (78%), Gaps = 11/332 (3%)
Query: 4 DRNVKNAVIALLVPLPSILFYLSFLNHYDSSLATESDPSFQSSWSTLWAWCYHHPXXXXX 63
+RN++NA++A L PLPSI+FYL+FL++Y SS +E S++ +WC +HP
Sbjct: 2 NRNLRNAIVAFLAPLPSIVFYLTFLSNYSSSSDSEL--------SSIQSWCLNHPLLLAN 53
Query: 64 XXXXXXXXXXXWVIGQIQSSHWMIDPYWTVIPVMLAHYYATHPLAHYDWWRSRIVILLTW 123
WVIG +QSSHWMID YWTVIPVML HY+A+HPL+ Y+ RS IVI LTW
Sbjct: 54 LLFFLNVNVLFWVIGLLQSSHWMIDVYWTVIPVMLVHYFASHPLSQYNKLRSMIVITLTW 113
Query: 124 VWSIRLTHNYFRREKWQWGAREDWRFTEMSQQYGKQWWWVSFFAVYVSQQMFLIGLSLPF 183
+WSIRLTHNYFRRE W+WGAREDWRF ++ +QYGK WWW+SFF+VYVSQQ+FLIG+ LP
Sbjct: 114 IWSIRLTHNYFRRENWEWGAREDWRFNDLRKQYGKHWWWLSFFSVYVSQQIFLIGICLPL 173
Query: 184 YVIHSVNHPLSIWDLVAIVVCLCGIVMAYFADTQLHDFMSRNNKLKGLGKPLVPVLDNGL 243
YVIHS++ PL+IWD ++ +CL GIVMAYFADTQLH+F++ N KLK GKP +P LD+GL
Sbjct: 174 YVIHSIDEPLNIWDFISSAICLTGIVMAYFADTQLHEFVTGNQKLKEQGKPKIPNLDSGL 233
Query: 244 WYYCRHPNYVGEQLWWWGLVVFAWSLGYGWTFIGALVNTLCLAYVTRLVEDRMLKQESRA 303
W Y RHPNY+GEQLWWWGLV+FAW+LG GWT IGALVNTLCL YVT LVE RM+KQ+ RA
Sbjct: 234 WRYSRHPNYLGEQLWWWGLVIFAWNLGQGWTLIGALVNTLCLVYVTILVERRMVKQQYRA 293
Query: 304 EAFRLYQKTTSVWIPWFKSSPSGLSSVKNKNA 335
EA+R YQKTTSVWIPWFKS ++ K+KN
Sbjct: 294 EAYRAYQKTTSVWIPWFKSHA---AATKDKNT 322
>AT1G18180.1 | Symbols: | Protein of unknown function (DUF1295) |
chr1:6255903-6257737 FORWARD LENGTH=305
Length = 305
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 113 WRSRIVILLTWVWSIRLTHNYFRREKWQWGAREDWRFTEMSQQYGKQWWWVSFFAVYVSQ 172
+R ++ +L VW +RL R QWG ED RF +M + GK ++ Q
Sbjct: 61 YRQIVLTVLVVVWGLRLGLFLLMR-ILQWG--EDRRFDDMRENIGK------LVVFWIFQ 111
Query: 173 QMFLIGLSLPFYVIHSVNHP--LSIWDLVAIVVCLCGIVMAYFADTQLHDFMS-RNNKLK 229
+++ +SLP +++ N D++ + + G ++ AD Q F NK K
Sbjct: 112 AVWVWTVSLPVTFVNASNGGRLFQPADVIGWTMWVAGFLIEATADQQKLSFKKCPENKGK 171
Query: 230 GLGKPLVPVLDNGLWYYCRHPNYVGEQLWWWGLVVFAWSLGYGWTF---IGALVNTLCLA 286
D G+W Y RHPNY GE L WWGL V + + G + IG + TL L
Sbjct: 172 WC--------DVGVWKYSRHPNYFGEMLLWWGLYVASLPVLKGLEYLVIIGPVFLTLLLL 223
Query: 287 YVTR--LVEDRMLKQESRAEAFRLYQKTTS 314
+V+ L+E+ K+ A+R Y+KTTS
Sbjct: 224 FVSGIPLLEESADKKYGNLGAYRHYKKTTS 253
>AT1G73650.3 | Symbols: | Protein of unknown function (DUF1295) |
chr1:27688409-27690165 REVERSE LENGTH=302
Length = 302
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 113 WRSRIVILLTWVWSIRLTHNYFRREKWQWGAREDWRFTEMSQQYGKQWWWVSFFAVYVSQ 172
+R ++ LL VW +RL R QWG ED RF E V + Q
Sbjct: 61 FRQIVLTLLVVVWGLRLGIFLLMR-ILQWG--EDRRFDEQRGNI------VRLIIFWTLQ 111
Query: 173 QMFLIGLSLPFYVIHSVNHPLSI--WDLVAIVVCLCGIVMAYFADTQLHDFMSRNNKLKG 230
+++ +SLP ++++ + S+ D++ + + G ++ AD Q F N +
Sbjct: 112 AVWVWTVSLPLTLVNASDGGGSLKPADVIGWTMWVFGFLIEAAADQQKLSF---KNSPEN 168
Query: 231 LGKPLVPVLDNGLWYYCRHPNYVGEQLWWWGLVVFAWSLGYGWTFI---GALVNTLCLAY 287
GK D G+W Y RHPNY GE L WWG+ V A + G ++ G L TL L +
Sbjct: 169 RGK----WCDVGVWKYSRHPNYFGEMLLWWGIFVAASPVLEGAEYLVIFGPLFLTLLLLF 224
Query: 288 VTR--LVEDRMLKQESRAEAFRLYQKTTS 314
V+ L+E K+ + A+R Y+KTTS
Sbjct: 225 VSGIPLLEASADKKHGNSGAYRSYKKTTS 253
>AT1G73650.2 | Symbols: | Protein of unknown function (DUF1295) |
chr1:27688549-27690165 REVERSE LENGTH=291
Length = 291
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 113 WRSRIVILLTWVWSIRLTHNYFRREKWQWGAREDWRFTEMSQQYGKQWWWVSFFAVYVSQ 172
+R ++ LL VW +RL R QWG ED RF E V + Q
Sbjct: 61 FRQIVLTLLVVVWGLRLGIFLLMR-ILQWG--EDRRFDEQRGNI------VRLIIFWTLQ 111
Query: 173 QMFLIGLSLPFYVIHSVNHPLSI--WDLVAIVVCLCGIVMAYFADTQLHDFMSRNNKLKG 230
+++ +SLP ++++ + S+ D++ + + G ++ AD Q F N +
Sbjct: 112 AVWVWTVSLPLTLVNASDGGGSLKPADVIGWTMWVFGFLIEAAADQQKLSF---KNSPEN 168
Query: 231 LGKPLVPVLDNGLWYYCRHPNYVGEQLWWWGLVVFAWSLGYGWTFI---GALVNTLCLAY 287
GK D G+W Y RHPNY GE L WWG+ V A + G ++ G L TL L +
Sbjct: 169 RGK----WCDVGVWKYSRHPNYFGEMLLWWGIFVAASPVLEGAEYLVIFGPLFLTLLLLF 224
Query: 288 VTR--LVEDRMLKQESRAEAFRLYQKTTS 314
V+ L+E K+ + A+R Y+KTTS
Sbjct: 225 VSGIPLLEASADKKHGNSGAYRSYKKTTS 253
>AT1G73650.4 | Symbols: | Protein of unknown function (DUF1295) |
chr1:27688420-27689606 REVERSE LENGTH=219
Length = 219
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 140 QWGAREDWRFTEMSQQYGKQWWWVSFFAVYVSQQMFLIGLSLPFYVIHSVNHPLSI--WD 197
QWG ED RF E V + Q +++ +SLP ++++ + S+ D
Sbjct: 5 QWG--EDRRFDEQRGNI------VRLIIFWTLQAVWVWTVSLPLTLVNASDGGGSLKPAD 56
Query: 198 LVAIVVCLCGIVMAYFADTQLHDFMSRNNKLKGLGKPLVPVLDNGLWYYCRHPNYVGEQL 257
++ + + G ++ AD Q F N + GK D G+W Y RHPNY GE L
Sbjct: 57 VIGWTMWVFGFLIEAAADQQKLSF---KNSPENRGK----WCDVGVWKYSRHPNYFGEML 109
Query: 258 WWWGLVVFAWSLGYGWTFI---GALVNTLCLAYVTR--LVEDRMLKQESRAEAFRLYQKT 312
WWG+ V A + G ++ G L TL L +V+ L+E K+ + A+R Y+KT
Sbjct: 110 LWWGIFVAASPVLEGAEYLVIFGPLFLTLLLLFVSGIPLLEASADKKHGNSGAYRSYKKT 169
Query: 313 TSVWI 317
TS I
Sbjct: 170 TSPLI 174
>AT1G73650.1 | Symbols: | Protein of unknown function (DUF1295) |
chr1:27688449-27689606 REVERSE LENGTH=208
Length = 208
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 140 QWGAREDWRFTEMSQQYGKQWWWVSFFAVYVSQQMFLIGLSLPFYVIHSVNHPLSI--WD 197
QWG ED RF E V + Q +++ +SLP ++++ + S+ D
Sbjct: 5 QWG--EDRRFDEQRGNI------VRLIIFWTLQAVWVWTVSLPLTLVNASDGGGSLKPAD 56
Query: 198 LVAIVVCLCGIVMAYFADTQLHDFMSRNNKLKGLGKPLVPVLDNGLWYYCRHPNYVGEQL 257
++ + + G ++ AD Q F N + GK D G+W Y RHPNY GE L
Sbjct: 57 VIGWTMWVFGFLIEAAADQQKLSF---KNSPENRGK----WCDVGVWKYSRHPNYFGEML 109
Query: 258 WWWGLVVFAWSLGYGWTFI---GALVNTLCLAYVTR--LVEDRMLKQESRAEAFRLYQKT 312
WWG+ V A + G ++ G L TL L +V+ L+E K+ + A+R Y+KT
Sbjct: 110 LWWGIFVAASPVLEGAEYLVIFGPLFLTLLLLFVSGIPLLEASADKKHGNSGAYRSYKKT 169
Query: 313 TSVWI 317
TS I
Sbjct: 170 TSPLI 174