Miyakogusa Predicted Gene

Lj3g3v2520120.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2520120.1 Non Chatacterized Hit- tr|D0P1Z7|D0P1Z7_PHYIT
Putative uncharacterized protein OS=Phytophthora
infes,33.33,5e-19,Exo_endo_phos,Endonuclease/exonuclease/phosphatase;
SUBFAMILY NOT NAMED,NULL; CARBON CATABOLITE REPR,CUFF.44146.1
         (241 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54130.4 | Symbols:  | Calcium-binding endonuclease/exonuclea...   287   5e-78
AT5G54130.2 | Symbols:  | Calcium-binding endonuclease/exonuclea...   286   1e-77
AT1G02270.1 | Symbols:  | Calcium-binding endonuclease/exonuclea...   283   6e-77
AT5G54130.3 | Symbols:  | Calcium-binding endonuclease/exonuclea...   277   5e-75

>AT5G54130.4 | Symbols:  | Calcium-binding
           endonuclease/exonuclease/phosphatase family |
           chr5:21962900-21964841 FORWARD LENGTH=351
          Length = 351

 Score =  287 bits (734), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 140/211 (66%), Positives = 166/211 (78%), Gaps = 5/211 (2%)

Query: 33  RVKKSGSFSALGEVNRDHS--CVSFTTFNILAPIYKRIDPQNQGLRESDTRSFWLARNQR 90
           R+ K GS++    +   H   C+S TTFNILAPIYKR+  ++Q LRESD R++WL RN R
Sbjct: 4   RISKIGSYAISSSIRDQHQQPCISCTTFNILAPIYKRLSHKDQSLRESDNRAYWLGRNHR 63

Query: 91  ILDGLLAESSSIMCLQEFWVGNEELVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIHKE 150
           I+D LL E SSI+CLQEFWVGNEELV++YE+RLG+AGY  +KL RTNNRGDGLLTA+HK+
Sbjct: 64  IIDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGLLTAVHKD 123

Query: 151 YLSVVNYRELLFNDFGDRVAQLLHVQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSLSI 210
           Y  VVN R+LLFND GDRVAQLLHV+   P     +   HQE LIVNTHLLFPHDS+LSI
Sbjct: 124 YFRVVNSRDLLFNDCGDRVAQLLHVELVPPY---SQYDAHQEVLIVNTHLLFPHDSTLSI 180

Query: 211 VRLQQVYQILQHVEAYQKENRLKSMPIILCG 241
           VRLQQVY+ILQ+VE+YQKE  L  MPIILCG
Sbjct: 181 VRLQQVYKILQYVESYQKEVNLSPMPIILCG 211


>AT5G54130.2 | Symbols:  | Calcium-binding
           endonuclease/exonuclease/phosphatase family |
           chr5:21962900-21965279 FORWARD LENGTH=436
          Length = 436

 Score =  286 bits (732), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 140/211 (66%), Positives = 166/211 (78%), Gaps = 5/211 (2%)

Query: 33  RVKKSGSFSALGEVNRDHS--CVSFTTFNILAPIYKRIDPQNQGLRESDTRSFWLARNQR 90
           R+ K GS++    +   H   C+S TTFNILAPIYKR+  ++Q LRESD R++WL RN R
Sbjct: 4   RISKIGSYAISSSIRDQHQQPCISCTTFNILAPIYKRLSHKDQSLRESDNRAYWLGRNHR 63

Query: 91  ILDGLLAESSSIMCLQEFWVGNEELVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIHKE 150
           I+D LL E SSI+CLQEFWVGNEELV++YE+RLG+AGY  +KL RTNNRGDGLLTA+HK+
Sbjct: 64  IIDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGLLTAVHKD 123

Query: 151 YLSVVNYRELLFNDFGDRVAQLLHVQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSLSI 210
           Y  VVN R+LLFND GDRVAQLLHV+   P     +   HQE LIVNTHLLFPHDS+LSI
Sbjct: 124 YFRVVNSRDLLFNDCGDRVAQLLHVELVPPY---SQYDAHQEVLIVNTHLLFPHDSTLSI 180

Query: 211 VRLQQVYQILQHVEAYQKENRLKSMPIILCG 241
           VRLQQVY+ILQ+VE+YQKE  L  MPIILCG
Sbjct: 181 VRLQQVYKILQYVESYQKEVNLSPMPIILCG 211


>AT1G02270.1 | Symbols:  | Calcium-binding
           endonuclease/exonuclease/phosphatase family |
           chr1:443301-446197 REVERSE LENGTH=484
          Length = 484

 Score =  283 bits (724), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 134/191 (70%), Positives = 160/191 (83%)

Query: 51  SCVSFTTFNILAPIYKRIDPQNQGLRESDTRSFWLARNQRILDGLLAESSSIMCLQEFWV 110
           S +S TTFNILAPIYKR+D +N   RESD R+ WLARNQRILD LL + SS++CLQE WV
Sbjct: 69  SNISCTTFNILAPIYKRVDQKNHSTRESDFRTLWLARNQRILDLLLHQRSSVICLQEVWV 128

Query: 111 GNEELVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIHKEYLSVVNYRELLFNDFGDRVA 170
           GNEELV+MY  +L ++GY +++LARTN+RGDGLLTAIHK++  VVNYRELLFNDFGDRVA
Sbjct: 129 GNEELVNMYHHQLSSSGYTIYQLARTNSRGDGLLTAIHKDHFKVVNYRELLFNDFGDRVA 188

Query: 171 QLLHVQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSLSIVRLQQVYQILQHVEAYQKEN 230
           QLLHV++  P   N K  + QE +IVNTHLLFPHDSSLSIVRL QVY+IL+++EAYQKEN
Sbjct: 189 QLLHVKTVIPFPLNGKQDVQQEVIIVNTHLLFPHDSSLSIVRLHQVYKILEYLEAYQKEN 248

Query: 231 RLKSMPIILCG 241
           +L  MPIILCG
Sbjct: 249 KLNHMPIILCG 259


>AT5G54130.3 | Symbols:  | Calcium-binding
           endonuclease/exonuclease/phosphatase family |
           chr5:21962900-21964841 FORWARD LENGTH=349
          Length = 349

 Score =  277 bits (708), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 138/211 (65%), Positives = 164/211 (77%), Gaps = 7/211 (3%)

Query: 33  RVKKSGSFSALGEVNRDHS--CVSFTTFNILAPIYKRIDPQNQGLRESDTRSFWLARNQR 90
           R+ K GS++    +   H   C+S TTFNILAPIYKR+  ++Q LRESD R++WL RN R
Sbjct: 4   RISKIGSYAISSSIRDQHQQPCISCTTFNILAPIYKRLSHKDQSLRESDNRAYWLGRNHR 63

Query: 91  ILDGLLAESSSIMCLQEFWVGNEELVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIHKE 150
           I+D LL E SSI+CLQEFWVGNEELV++YE+RLG+AGY  +KL RTNNR  GLLTA+HK+
Sbjct: 64  IIDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNR--GLLTAVHKD 121

Query: 151 YLSVVNYRELLFNDFGDRVAQLLHVQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSLSI 210
           Y  VVN R+LLFND GDRVAQLLHV+   P     +   HQE LIVNTHLLFPHDS+LSI
Sbjct: 122 YFRVVNSRDLLFNDCGDRVAQLLHVELVPPY---SQYDAHQEVLIVNTHLLFPHDSTLSI 178

Query: 211 VRLQQVYQILQHVEAYQKENRLKSMPIILCG 241
           VRLQQVY+ILQ+VE+YQKE  L  MPIILCG
Sbjct: 179 VRLQQVYKILQYVESYQKEVNLSPMPIILCG 209