Miyakogusa Predicted Gene

Lj3g3v2519980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2519980.1 Non Chatacterized Hit- tr|A2XWR6|A2XWR6_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,45.68,0.0000000008,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; GUB_WAK_bind,Wall-associated receptor kinase
galact,CUFF.44126.1
         (361 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46850.1 | Symbols:  | Protein kinase superfamily protein | c...   306   1e-83

>AT2G46850.1 | Symbols:  | Protein kinase superfamily protein |
           chr2:19251083-19253313 FORWARD LENGTH=633
          Length = 633

 Score =  306 bits (784), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 162/310 (52%), Positives = 205/310 (66%), Gaps = 15/310 (4%)

Query: 40  ETCGKFHVPFPFYVNTSCVSVSPAFHLSCSNSASLLLKIGSENYPVLEFFSDGLLVGFPG 99
           E CG F V FPF +++S  S + AF LSC NS++L L I  ++Y ++EFF+DGLLV FP 
Sbjct: 41  EKCGNFSVSFPFQLSSS--SSAAAFRLSCENSSTLFLHINHQSYRIIEFFTDGLLVDFPS 98

Query: 100 TSPGRQYNDLNSFGEGFGGKDYFGVPVDNVIGLYDCEDSSLCKANCETINL-----PXXX 154
           +   RQ+NDL SF   F    +F +  +NVIGLYDCEDSSLCK  CET +L         
Sbjct: 99  SPSCRQFNDLRSFP--FSANQFFSISFENVIGLYDCEDSSLCKFGCETNDLFGCDGREED 156

Query: 155 XXXXXXXXXXYPLSDHSVWHLGEGFSVFSQFGCRGFSSWAVLRGAYAGKRGVKLEWGVPR 214
                     YPLSDHS W +G+ FSVFS++GCRGFSSW V RG   GKRGVKLEW +PR
Sbjct: 157 ETSGGDIGCCYPLSDHSAWRVGDDFSVFSRYGCRGFSSWLVPRGTNRGKRGVKLEWAIPR 216

Query: 215 NSSKDVCARNAEIVNATAIAGGVRCVCQDGFVGDGFANGTGCLPACIKDGHEAYGSDCHI 274
           NS + +C R A  VNATAI G VRCVC+DGFVGDGF +GTGCL +C KDG E YG  C I
Sbjct: 217 NSPEAICDREARTVNATAIEGSVRCVCRDGFVGDGFLHGTGCLKSCFKDGKELYGDKCKI 276

Query: 275 KRHDQRKMVIIAGILGPVIIVASLIVLFYLLKR---KEKPGMFDAE--QAYYHNISFRKG 329
           K+H+ +K+ ++AG+L P+ I+ SL+ LF LLKR     K   FD        +++SFRKG
Sbjct: 277 KKHNGKKLTVLAGVLAPLFILGSLLALFCLLKRPVTSHKDQQFDISTTTTTTNSVSFRKG 336

Query: 330 C-RTRLFSQK 338
             +TRLF+ +
Sbjct: 337 YNKTRLFTYR 346