Miyakogusa Predicted Gene
- Lj3g3v2517670.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2517670.1 Non Chatacterized Hit- tr|I1KHN8|I1KHN8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47882 PE,74.23,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; SUBFA,CUFF.44118.1
(379 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 250 1e-66
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 242 3e-64
AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 215 4e-56
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 210 2e-54
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 186 3e-47
AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 184 1e-46
AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 181 8e-46
AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 | chr5:1894... 154 9e-38
AT5G65320.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 132 4e-31
AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH) DNA-... 130 1e-30
AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH) DNA-... 100 3e-21
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 60 2e-09
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 57 2e-08
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 56 3e-08
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 56 3e-08
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 56 3e-08
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 1e-06
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 2e-06
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 2e-06
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 2e-06
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 49 4e-06
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 49 5e-06
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22939661-22941332 FORWARD
LENGTH=358
Length = 358
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 163/386 (42%), Positives = 225/386 (58%), Gaps = 43/386 (11%)
Query: 2 MERLQGPINSCFFGEHLEVNCLE-QALVEAESLRLEEEQHLLISTLEDNMPFLQMLQSVE 60
MER QG IN CFF +V LE Q EA+S +E++ +L+D +PFLQMLQS +
Sbjct: 1 MERFQGHINPCFFDRKPDVRSLEVQGFAEAQSFAFKEKEE---ESLQDTVPFLQMLQSED 57
Query: 61 YHPQQFFPLKEPSFQTLLRLQHLKKPWELENQTQAQAAFEQLESCVTHDMLEMQSPVKSE 120
P FF +KEP+F TLL LQ LK+PWELE + LE H SPV+SE
Sbjct: 58 --PSSFFSIKEPNFLTLLSLQTLKEPWELER-------YLSLEDSQFH------SPVQSE 102
Query: 121 SNYELQQQQHTHSASCV----------EKLSYECNQEEPLKTEQSCLKSQHAXXXXXXXX 170
+N ++ S+ + S + K + + L Q
Sbjct: 103 TNRFMEGANQAVSSQEIPFSQANMTLPSSTSSPLSAHSRRKRKINHLLPQEMTREKRKRR 162
Query: 171 XXXXXXNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDF 230
N E++ENQR+ HIAVERNRRRQMN+H++ LR+L+PPSYIQRGDQASI+GGAI++
Sbjct: 163 KTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINY 222
Query: 231 VKELEQLVQSLESQKRMRKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAEN 290
VK LEQ++QSLESQKR ++ + + S S+ E+
Sbjct: 223 VKVLEQIIQSLESQKRTQQQSNS-------------EVVENALNHLSGISSNDLWTTLED 269
Query: 291 KSESADIKVTLIQSHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITS-SEASVIYSL 349
++ I+ T+IQ+HV+LK++CE+K GQL+K I++LE L+LT+LHLNIT+ S +SV YS
Sbjct: 270 QTCIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSF 329
Query: 350 NLKIEEDCMLGSANDIAEAVHHILSI 375
NLK+E++C L SA++I AVH I I
Sbjct: 330 NLKMEDECDLESADEITAAVHRIFDI 355
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:19239694-19242373 FORWARD
LENGTH=371
Length = 371
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/380 (41%), Positives = 214/380 (56%), Gaps = 57/380 (15%)
Query: 19 EVNCLEQALVEAESLRL-------------EEEQHLLISTL--EDNMPFLQMLQSVEYHP 63
E+ CL+Q + SL++ EEEQ L +L + +PFLQMLQ E P
Sbjct: 22 EIFCLDQKVNVRRSLQVQETVEDHQSFALEEEEQQLSTPSLLQDTTIPFLQMLQQSE-DP 80
Query: 64 QQFFPLKEPSFQTLLRLQHLKKPWELENQTQAQAAFEQLESCVTHDMLEMQSPVKSESNY 123
F K+PSF LL LQ L+KPWELEN + H++ E SP+ SE+N+
Sbjct: 81 SPFLSFKDPSFLALLSLQTLEKPWELEN-------------YLPHEVPEFHSPIHSETNH 127
Query: 124 ELQQQQHTHSASCVEKLSYECNQE---EPLKTEQSCLKSQHAXXXX------XXXXXXXX 174
+ H+ S NQE PL+ +S K ++
Sbjct: 128 ------YYHNPSLEGVNEAISNQELPFNPLENARSRRKRKNNNLASLMTREKRKRRRTKP 181
Query: 175 XXNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKEL 234
N E++E+QRMTHIAVERNRRRQMN HL+ LRS++P SYIQRGDQASI+GGAIDFVK L
Sbjct: 182 TKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKIL 241
Query: 235 EQLVQSLESQKRMRKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAENKSES 294
EQ +QSLE+QKR +++++ +R+ SS + E +S
Sbjct: 242 EQQLQSLEAQKRSQQSDD------------NKEQIPEDNSLRNISSNKLRASNKEEQSSK 289
Query: 295 ADIKVTLIQSHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITS-SEASVIYSLNLKI 353
I+ T+I+SHVNLKI+C RK GQL++ I+ LE LR T+LHLNITS + SV YS NLK+
Sbjct: 290 LKIEATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKM 349
Query: 354 EEDCMLGSANDIAEAVHHIL 373
E++C LGSA++I A+ I
Sbjct: 350 EDECNLGSADEITAAIRQIF 369
>AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:621334-622697 FORWARD
LENGTH=315
Length = 315
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/350 (39%), Positives = 192/350 (54%), Gaps = 79/350 (22%)
Query: 44 STLEDNMPFLQMLQSVEYHPQQFFPLKEPS--FQTLLRLQHLKKPWELENQTQAQAAFEQ 101
+T+E+ +PFLQMLQ +E HP F EP+ Q+LL++Q L+
Sbjct: 20 TTMEEKIPFLQMLQCIE-HP---FTTTEPNQFLQSLLQIQTLES---------------- 59
Query: 102 LESCVTHDMLEMQSPVKSESNYELQQQQHTHSASCVEKLSYECNQEEPLKTEQSCLKSQH 161
+SC+T + + P +++ + E+ +TE +
Sbjct: 60 -KSCLTLETNIKRDPGQTD------------------------DPEKDPRTENGAV---- 90
Query: 162 AXXXXXXXXXXXXXXNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQA 221
NK++VENQRMTHIAVERNRRRQMN+HL+ LRSLMPPS++QRGDQA
Sbjct: 91 TVKEKRKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQA 150
Query: 222 SIIGGAIDFVKELEQLVQSLESQKRMRKNEE-------------ACXXXXXXXXXXXXXX 268
SI+GGAIDF+KELEQL+QSLE++KR +E AC
Sbjct: 151 SIVGGAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLAC---TNSSISSVSTT 207
Query: 269 XXHGFGMRSSSSTEGDEVKAENKSESADIKVTLIQSHVNLKIECERKPGQLIKVIVALED 328
+GF R GD + +++ T+IQ+HV+LK+ C+R Q++K IV++E+
Sbjct: 208 SENGFTARFGG---GD---------TTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEE 255
Query: 329 LRLTILHLNITSSEASVIYSLNLKIEEDCMLGSANDIAEAVHHILSIING 378
L+L ILHL I+SS VIYS NLK+E+ C LGSA++IA AVH I ING
Sbjct: 256 LKLAILHLTISSSFDFVIYSFNLKMEDGCKLGSADEIATAVHQIFEQING 305
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22940231-22941332 FORWARD
LENGTH=307
Length = 307
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 193/332 (58%), Gaps = 39/332 (11%)
Query: 55 MLQSVEYHPQQFFPLKEPSFQTLLRLQHLKKPWELENQTQAQAAFEQLESCVTHDMLEMQ 114
MLQS + P FF +KEP+F TLL LQ LK+PWELE + LE H
Sbjct: 1 MLQSED--PSSFFSIKEPNFLTLLSLQTLKEPWELER-------YLSLEDSQFH------ 45
Query: 115 SPVKSESNYELQQQQHTHSASCV----------EKLSYECNQEEPLKTEQSCLKSQHAXX 164
SPV+SE+N ++ S+ + S + K + + L Q
Sbjct: 46 SPVQSETNRFMEGANQAVSSQEIPFSQANMTLPSSTSSPLSAHSRRKRKINHLLPQEMTR 105
Query: 165 XXXXXXXXXXXXNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASII 224
N E++ENQR+ HIAVERNRRRQMN+H++ LR+L+PPSYIQRGDQASI+
Sbjct: 106 EKRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIV 165
Query: 225 GGAIDFVKELEQLVQSLESQKRMRKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGD 284
GGAI++VK LEQ++QSLESQKR ++ + + S S+
Sbjct: 166 GGAINYVKVLEQIIQSLESQKRTQQQSNS-------------EVVENALNHLSGISSNDL 212
Query: 285 EVKAENKSESADIKVTLIQSHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITS-SEA 343
E+++ I+ T+IQ+HV+LK++CE+K GQL+K I++LE L+LT+LHLNIT+ S +
Sbjct: 213 WTTLEDQTCIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHS 272
Query: 344 SVIYSLNLKIEEDCMLGSANDIAEAVHHILSI 375
SV YS NLK+E++C L SA++I AVH I I
Sbjct: 273 SVSYSFNLKMEDECDLESADEITAAVHRIFDI 304
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 130/216 (60%), Gaps = 27/216 (12%)
Query: 179 EDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLV 238
E+VE+QRMTHIAVERNRR+QMN+HL VLRSLMP SY+QRGDQASIIGGAI+FV+ELEQL+
Sbjct: 190 EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLL 249
Query: 239 QSLESQKRMR------------------KNEEACXXXXXXXXXXXXXXXXHGFGMRSSSS 280
Q LESQKR R G G+R
Sbjct: 250 QCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLR---- 305
Query: 281 TEGDEVKAENKSESADIKVTLIQSHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITS 340
E AENKS AD++V L+ +KI R+PGQLIK I ALEDL L+ILH NIT+
Sbjct: 306 ----EETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITT 361
Query: 341 SEASVIYSLNLKIEEDCMLGSANDIAEAVHHILSII 376
E +V+YS N+KI + +A DIA ++ I S I
Sbjct: 362 MEQTVLYSFNVKITSETRF-TAEDIASSIQQIFSFI 396
>AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:27180066-27182268 FORWARD
LENGTH=320
Length = 320
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 135/201 (67%), Gaps = 4/201 (1%)
Query: 177 NKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQ 236
NKE++ENQRMTHIAVERNRR+QMN++L+VLRSLMPP Y QRGDQASI+GGAI+++KELE
Sbjct: 116 NKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEH 175
Query: 237 LVQSLESQ-KRMRKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAENKSESA 295
+QS+E K ++ A F S+ AE +E
Sbjct: 176 HLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAE-- 233
Query: 296 DIKVTLIQSHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKIEE 355
I+VT+++SH +LKI +++P QL+K++ +++ LRLT+LHLN+T+ + SV+YS+++K+EE
Sbjct: 234 -IEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEE 292
Query: 356 DCMLGSANDIAEAVHHILSII 376
L + DIA AV+ IL I
Sbjct: 293 GSQLNTVEDIAAAVNQILRRI 313
>AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:7938448-7940489 REVERSE
LENGTH=304
Length = 304
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 137/200 (68%), Gaps = 5/200 (2%)
Query: 177 NKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQ 236
NKE++ENQRMTHIAVERNRR+QMN++L+VLRSLMP SY QRGDQASI+GGAI++VKELE
Sbjct: 106 NKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEH 165
Query: 237 LVQSLESQKRMRKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAENKSESAD 296
++QS+E KR R ++ F ST+ E+ S A+
Sbjct: 166 ILQSMEP-KRTRTHDPKGDKTSTSSLVGPFT----DFFSFPQYSTKSSSDVPESSSSPAE 220
Query: 297 IKVTLIQSHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKIEED 356
I+VT+ +SH N+KI ++KP QL+K+I +L+ LRLT+LHLN+T+ S++YS+++++EE
Sbjct: 221 IEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEG 280
Query: 357 CMLGSANDIAEAVHHILSII 376
L + +DIA A++ + I
Sbjct: 281 SQLNTVDDIATALNQTIRRI 300
>AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 |
chr5:18945639-18947434 FORWARD LENGTH=327
Length = 327
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 133/221 (60%), Gaps = 21/221 (9%)
Query: 177 NKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQ 236
N+E+ ENQRMTHIAVERNRRRQMN HLSVLRSLMP + +GDQASI+GGAIDF+KELE
Sbjct: 79 NEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEH 138
Query: 237 LVQSLESQKRMRKNEEACXXXXXXXXXXXXXXXXH--------GFGMRSSSSTEGDEVKA 288
+ SLE+QK H F + S ++ + +
Sbjct: 139 KLLSLEAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQENRNGS 198
Query: 289 EN--KSESADIKVTLIQSHVNLKIECER-----------KPGQLIKVIVALEDLRLTILH 335
+ K+ D++VTLI++H N++I R KP QL K++ +L+ L L+ILH
Sbjct: 199 TSSVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSLSLSILH 258
Query: 336 LNITSSEASVIYSLNLKIEEDCMLGSANDIAEAVHHILSII 376
L++T+ + IYS++ K+EE C L S +DIA AVHH+LSII
Sbjct: 259 LSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSII 299
>AT5G65320.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:26107368-26108640 REVERSE
LENGTH=296
Length = 296
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 116/195 (59%), Gaps = 2/195 (1%)
Query: 180 DVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQ 239
D ENQRM HIAVERNRR+QMN LS+L+S+MP SY Q DQASII G I ++K+LEQ +Q
Sbjct: 96 DKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQ 155
Query: 240 SLESQKRMRKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAENKSESADIKV 299
SLE+Q + K ++ ++SS+ + AD++V
Sbjct: 156 SLEAQLKATKLNQSPNIFSDFFMFPQYSTATAT-ATATASSSSSSHHHHKRLEVVADVEV 214
Query: 300 TLIQSHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKIEEDCML 359
T+++ H N+K+ + +P L K+I L L+ LHLN+T+S+ +++ ++K+E DC L
Sbjct: 215 TMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKVEADCQL 274
Query: 360 G-SANDIAEAVHHIL 373
S N++A VH ++
Sbjct: 275 TPSGNEVANTVHEVV 289
>AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:1846531-1848016
FORWARD LENGTH=202
Length = 202
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 105/179 (58%), Gaps = 5/179 (2%)
Query: 186 MTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQK 245
M+HIAVERNRRRQMN+HL LRSL P YI+RGDQASIIGG I+F+KEL+QLVQ LES+K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 246 RMRK-NEEACXXXXXXXXXXXXXXXXHGFGMRS----SSSTEGDEVKAENKSESADIKVT 300
R + N + +++ EV A S A+++
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120
Query: 301 LIQSHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKIEEDCML 359
+ S+V L++ R GQL+K+I LE L +LHLNI+S E +V+Y +KI +C L
Sbjct: 121 ISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHL 179
>AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:21586606-21588941
REVERSE LENGTH=364
Length = 364
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Query: 177 NKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQ 236
NK+D + Q+M+H+ VERNRR+QMN+HL+VLRSLMP Y++RGDQASIIGG ++++ EL+Q
Sbjct: 94 NKQDGQ-QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQ 152
Query: 237 LVQSLESQKRMRKNEE 252
++QSLE++K+ + E
Sbjct: 153 VLQSLEAKKQRKTYAE 168
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 284 DEVKAENKSESADIKVTLIQSHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEA 343
+E+ A +KS AD++V ++V LK + PGQ++K+I ALEDL L IL +NI + +
Sbjct: 275 NELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDE 334
Query: 344 SVIYSLNLKIEEDCMLGSANDIAEAVHHIL 373
+++ S +KI +C L SA ++A+ +
Sbjct: 335 TMLNSFTIKIGIECQL-SAEELAQQIQQTF 363
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 188 HIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQKRM 247
++ ER RR+++ND L LRSL+P I + D+ASI+G AI++VKEL+ ++ E Q +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVP--RITKLDRASILGDAINYVKELQN--EAKELQDEL 370
Query: 248 RKNEEA-CXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAENKSESADIKVTLIQSHV 306
+N E GF S ++ VK + E+++ K ++ V
Sbjct: 371 EENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQV 430
Query: 307 N----------LKIECERKPGQLIKVIVALEDLRLTILHLNIT 339
+ +K+ CE KPG +++ AL+ L L + + N T
Sbjct: 431 DVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTT 473
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 188 HIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQKRM 247
++ ER RR+++ND L +LRS++P I + D+ASI+G AID++KEL Q + L ++
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 248 RKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAENKSESADIKVTLIQSH-V 306
+ SS + K + ++V L + V
Sbjct: 326 TPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSP--------KGQQPRVEVRLREGKAV 377
Query: 307 NLKIECERKPGQLIKVIVALEDLRLTI 333
N+ + C R+PG L+ + AL++L L +
Sbjct: 378 NIHMFCGRRPGLLLSTMRALDNLGLDV 404
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 26/182 (14%)
Query: 188 HIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQKRM 247
++ ER RR+++ND L +LRS++P I + D+ASI+G AID++KEL Q + L ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNE--- 362
Query: 248 RKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAE--------NKSESADIKV 299
H + + T VK E K + A ++V
Sbjct: 363 -------LESTPPGSLPPTSSSFH--PLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEV 413
Query: 300 TLIQSH-VNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKIEEDCM 358
L + VN+ + C R+PG L+ + AL++L L + I+ ++L++ E C
Sbjct: 414 RLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG---FALDVFRAEQCQ 470
Query: 359 LG 360
G
Sbjct: 471 EG 472
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 26/182 (14%)
Query: 188 HIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQKRM 247
++ ER RR+++ND L +LRS++P I + D+ASI+G AID++KEL Q + L ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNE--- 362
Query: 248 RKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAE--------NKSESADIKV 299
H + + T VK E K + A ++V
Sbjct: 363 -------LESTPPGSLPPTSSSFH--PLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEV 413
Query: 300 TLIQSH-VNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKIEEDCM 358
L + VN+ + C R+PG L+ + AL++L L + I+ ++L++ E C
Sbjct: 414 RLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG---FALDVFRAEQCQ 470
Query: 359 LG 360
G
Sbjct: 471 EG 472
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 26/182 (14%)
Query: 188 HIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQKRM 247
++ ER RR+++ND L +LRS++P I + D+ASI+G AID++KEL Q + L ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNE--- 362
Query: 248 RKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAE--------NKSESADIKV 299
H + + T VK E K + A ++V
Sbjct: 363 -------LESTPPGSLPPTSSSFH--PLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEV 413
Query: 300 TLIQSH-VNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKIEEDCM 358
L + VN+ + C R+PG L+ + AL++L L + I+ ++L++ E C
Sbjct: 414 RLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG---FALDVFRAEQCQ 470
Query: 359 LG 360
G
Sbjct: 471 EG 472
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 188 HIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQKRM 247
+I ERNRR+++N L LRS++P I + D+ASII AI +++ L+ + LE++ R
Sbjct: 55 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 112
Query: 248 RKNEEACXXXXXXXXXXXXXXXXHGFGMR---SSSSTEGDEVKAENKSESADIKVTLI-Q 303
++ M+ S SST EV ++KVT + +
Sbjct: 113 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEV--------LELKVTFMGE 164
Query: 304 SHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKIEED 356
+ + + C ++ ++K+ E L L IL N+TS + +++ ++ +E+
Sbjct: 165 RTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEE 217
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 188 HIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQKRM 247
HI ER RR ++ L +L+P +++ D+AS++G A+ +K L++ V LE QK+
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPG--LKKMDKASVLGDALKHIKYLQERVGELEEQKKE 210
Query: 248 RKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAENKSESADIKVTLIQSHVN 307
R+ E SSS +G + + +I+V V
Sbjct: 211 RRLESMVLVKKSKLILDDNNQSF------SSSCEDG-----FSDLDLPEIEVRFSDEDVL 259
Query: 308 LKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKIEEDCMLGSANDIAE 367
+KI CE++ G L K++ +E L + I + ++ + ++ ++ K E D + + D+ +
Sbjct: 260 IKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFGPTLDITIIAKKESDFDM-TLMDVVK 318
Query: 368 AVHHILS 374
++ LS
Sbjct: 319 SLRSALS 325
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 188 HIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQKRM 247
+I ERNRR+++N L LRS++P I + D+ASII AI +++ L+ + LE++ R
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 248 RKNEEACXXXXXXXXXXXXXXXXHGFGMR---SSSSTEGDEVKAENKSESADIKVTLI-Q 303
++ M+ S SST EV ++KVT + +
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEV--------LELKVTFMGE 165
Query: 304 SHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKI 353
+ + + C ++ ++K+ E L L IL N+TS + +++ ++I
Sbjct: 166 RTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEI 215
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 188 HIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQKRM 247
+I ERNRR+++N L LRS++P I + D+ASII AI +++ L+ + LE++ R
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 248 RKNEEACXXXXXXXXXXXXXXXXHGFGMR---SSSSTEGDEVKAENKSESADIKVTLI-Q 303
++ M+ S SST EV ++KVT + +
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEV--------LELKVTFMGE 165
Query: 304 SHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKI 353
+ + + C ++ ++K+ E L L IL N+TS + +++ +++
Sbjct: 166 RTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEV 215
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 186 MTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQK 245
+ H+ ER RR ++N LR+++P + + D+AS++G AI ++ EL+ V ES+K
Sbjct: 451 LNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAIAYINELKSKVVKTESEK 508
Query: 246 RMRKNEEACXXXXXXXXXXXXXXXXHGFGMRSSSSTEGDEVKAENKSESADIKVTLIQSH 305
KN+ G M SS S+ K +I+V +I
Sbjct: 509 LQIKNQ----LEEVKLELAGRKASASGGDMSSSCSSI--------KPVGMEIEVKIIGWD 556
Query: 306 VNLKIECERKPGQLIKVIVALEDLRLTILHLNIT 339
+++E ++ +++ AL DL L + H +++
Sbjct: 557 AMIRVESSKRNHPAARLMSALMDLELEVNHASMS 590
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 186 MTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQK 245
+ H+ ER RR ++N LRS++P I + D+AS++G AI ++KEL++ V+ +E ++
Sbjct: 394 LNHVEAERQRREKLNQRFYALRSVVP--NISKMDKASLLGDAISYIKELQEKVKIMEDER 451
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 188 HIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLVQSLESQKRM 247
+I ERNRR+++N L LRS++P I + D+ASII AI +++ L+ + LE++ R
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 248 RKNEEACXXXXXXXXXXXXXXXXHGFGMR---SSSSTEGDEVKAENKSESADIKVTLI-Q 303
++ M+ S SST EV ++KVT + +
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEV--------LELKVTFMGE 165
Query: 304 SHVNLKIECERKPGQLIKVIVALEDLRLTILHLNITSSEASVIYSLNLKI 353
+ + + C ++ ++K+ E L L IL N+TS + +++ +++
Sbjct: 166 RTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEL 215