Miyakogusa Predicted Gene
- Lj3g3v2517630.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2517630.2 tr|B9HM08|B9HM08_POPTR Pseudo response regulator
OS=Populus trichocarpa GN=PtpRR7 PE=4 SV=1,31.16,4e-17,no
description,NULL; CheY-like,CheY-like superfamily; seg,NULL;
RESPONSE_REGULATORY,Signal transduct,CUFF.44114.2
(663 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula... 225 8e-59
AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5... 222 7e-58
AT5G60100.3 | Symbols: PRR3 | pseudo-response regulator 3 | chr5... 174 2e-43
AT5G60100.1 | Symbols: APRR3, PRR3 | pseudo-response regulator 3... 174 2e-43
AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 | chr5... 172 6e-43
AT5G02810.1 | Symbols: PRR7, APRR7 | pseudo-response regulator 7... 164 1e-40
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif -co... 130 3e-30
AT2G25180.1 | Symbols: ARR12, RR12 | response regulator 12 | chr... 100 2e-21
AT3G16857.2 | Symbols: ARR1, RR1 | response regulator 1 | chr3:5... 97 3e-20
AT3G16857.1 | Symbols: ARR1, RR1 | response regulator 1 | chr3:5... 97 4e-20
AT4G31920.1 | Symbols: ARR10, RR10 | response regulator 10 | chr... 97 4e-20
AT4G16110.1 | Symbols: ARR2, RR2 | response regulator 2 | chr4:9... 96 6e-20
AT1G67710.1 | Symbols: ARR11 | response regulator 11 | chr1:2537... 93 7e-19
AT2G01760.1 | Symbols: ARR14, RR14 | response regulator 14 | chr... 88 2e-17
AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula... 87 3e-17
AT5G58080.1 | Symbols: ARR18, RR18 | response regulator 18 | chr... 80 3e-15
AT2G46670.1 | Symbols: | CCT motif family protein | chr2:191645... 80 6e-15
AT3G57040.1 | Symbols: ARR9, ATRR4 | response regulator 9 | chr3... 77 5e-14
AT1G19050.1 | Symbols: ARR7 | response regulator 7 | chr1:657791... 75 1e-13
AT1G74890.1 | Symbols: ARR15 | response regulator 15 | chr1:2813... 75 2e-13
AT2G41310.1 | Symbols: ATRR3, ARR8, RR3 | response regulator 3 |... 73 8e-13
AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | response regula... 72 2e-12
AT5G62920.1 | Symbols: ARR6 | response regulator 6 | chr5:252527... 72 2e-12
AT1G59940.1 | Symbols: ARR3 | response regulator 3 | chr1:220658... 71 2e-12
AT1G49190.1 | Symbols: ARR19, RR19 | response regulator 19 | chr... 70 4e-12
AT1G49190.2 | Symbols: RR19 | response regulator 19 | chr1:18191... 70 4e-12
AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6, RR5 | response regulat... 68 2e-11
AT3G56380.1 | Symbols: ARR17, RR17 | response regulator 17 | chr... 67 3e-11
AT1G68210.1 | Symbols: APRR6, PRR6 | pseudo-response regulator 6... 65 1e-10
AT3G62670.1 | Symbols: ARR20, MEE41, RR20 | response regulator 2... 64 3e-10
AT5G49240.1 | Symbols: APRR4, PRR4 | pseudo-response regulator 4... 64 4e-10
AT5G07210.1 | Symbols: ARR21, RR21 | response regulator 21 | chr... 63 8e-10
AT2G40670.1 | Symbols: ARR16, RR16 | response regulator 16 | chr... 60 4e-09
AT4G00760.1 | Symbols: APRR8, PRR8 | pseudo-response regulator 8... 57 4e-08
AT5G14370.1 | Symbols: | CCT motif family protein | chr5:463214... 57 4e-08
AT5G57180.2 | Symbols: CIA2 | chloroplast import apparatus 2 | c... 57 4e-08
AT2G40670.2 | Symbols: RR16 | response regulator 16 | chr2:16970... 56 7e-08
AT4G25990.1 | Symbols: CIL | CCT motif family protein | chr4:131... 55 2e-07
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858... 55 2e-07
AT1G07050.1 | Symbols: | CCT motif family protein | chr1:216432... 54 3e-07
AT1G73870.1 | Symbols: | B-box type zinc finger protein with CC... 53 6e-07
AT2G27070.1 | Symbols: ARR13, RR13 | response regulator 13 | chr... 52 1e-06
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233... 52 1e-06
AT1G68520.1 | Symbols: | B-box type zinc finger protein with CC... 52 1e-06
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 52 2e-06
AT1G25440.1 | Symbols: | B-box type zinc finger protein with CC... 51 2e-06
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517... 49 8e-06
AT1G49130.1 | Symbols: | B-box type zinc finger protein with CC... 49 8e-06
AT1G49130.2 | Symbols: | B-box type zinc finger protein with CC... 49 9e-06
>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
9 | chr2:19232874-19234901 FORWARD LENGTH=468
Length = 468
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 103/153 (67%), Positives = 125/153 (81%), Gaps = 2/153 (1%)
Query: 29 RSAEVVRCDTFLPQVELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKG 88
+S+EVV+ + +LP+ L +LLVE D+STR II+ALLRKC Y+VV VS+GL AWE LK K
Sbjct: 21 KSSEVVQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKS 80
Query: 89 PEIDLILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLI 148
IDLILTEL+LP ISGFALL+++MEH+ CKNIPVIMMSSQDS+ MVLKCML+GAAD+LI
Sbjct: 81 HNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLI 140
Query: 149 KPVRKNELTNLWQHVWRRKAVSSVPQNTAFPQA 181
KP+RKNEL NLWQHVWRR + P TA Q+
Sbjct: 141 KPMRKNELKNLWQHVWRRLTLRDDP--TAHAQS 171
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 605 SHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQVSDD 653
S REAAL K+ LKRK+RC+ KKVRYQSRKK AEQRPRVKGQFV V+ D
Sbjct: 415 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSD 463
>AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5 |
chr5:8356204-8358873 REVERSE LENGTH=667
Length = 667
Score = 222 bits (566), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 137/195 (70%), Gaps = 5/195 (2%)
Query: 33 VVRCDTFLPQVELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEID 92
+V+ + FLP++ L +LLVE D STR II+ALLRKCSYRV V +GLKAWE LK K +D
Sbjct: 147 LVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVD 206
Query: 93 LILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVR 152
LILTE++LP ISG+ALL++IMEHD+CKNIPVIMMS+QDSV+ V KCMLKGAAD+L+KP+R
Sbjct: 207 LILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLR 266
Query: 153 KNELTNLWQHVWRRK---AVSSVPQNTAFPQ--ACNQSGGTVNXXXXXXXXXXXXXXGKS 207
+NEL NLWQHVWRR+ A S P N + Q A S N +S
Sbjct: 267 RNELRNLWQHVWRRQTSLAPDSFPWNESVGQQKAEGASANNSNGKRDDHVVSGNGGDAQS 326
Query: 208 TCTSTFVEAESAGME 222
+CT +E ESA +E
Sbjct: 327 SCTRPEMEGESADVE 341
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 602 HRSSHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQV 650
+S REAALTK+ +KRK+RCY KKVRY+SRKK AEQRPR+KGQFV QV
Sbjct: 613 QQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQV 661
>AT5G60100.3 | Symbols: PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=495
Length = 495
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 99/136 (72%)
Query: 31 AEVVRCDTFLPQVELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPE 90
A VV+ + +LP L +LLVE D STRHI++ALL+ CSY V V + L+AW L+ +
Sbjct: 50 AHVVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSC 109
Query: 91 IDLILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKP 150
IDL+LTE+++P SG LLS IM H KNIPVIMMSS DS+ +V KC+ GA DFL+KP
Sbjct: 110 IDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKP 169
Query: 151 VRKNELTNLWQHVWRR 166
+RKNEL NLWQHVWRR
Sbjct: 170 IRKNELKNLWQHVWRR 185
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 39/50 (78%)
Query: 603 RSSHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQVSD 652
R + REAAL K+ LKRKERC+ KKVRY SRKK AEQRP VKGQF+ + D
Sbjct: 438 RWAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRKRDD 487
>AT5G60100.1 | Symbols: APRR3, PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=495
Length = 495
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 99/136 (72%)
Query: 31 AEVVRCDTFLPQVELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPE 90
A VV+ + +LP L +LLVE D STRHI++ALL+ CSY V V + L+AW L+ +
Sbjct: 50 AHVVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSC 109
Query: 91 IDLILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKP 150
IDL+LTE+++P SG LLS IM H KNIPVIMMSS DS+ +V KC+ GA DFL+KP
Sbjct: 110 IDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKP 169
Query: 151 VRKNELTNLWQHVWRR 166
+RKNEL NLWQHVWRR
Sbjct: 170 IRKNELKNLWQHVWRR 185
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 39/50 (78%)
Query: 603 RSSHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQVSD 652
R + REAAL K+ LKRKERC+ KKVRY SRKK AEQRP VKGQF+ + D
Sbjct: 438 RWAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRKRDD 487
>AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=522
Length = 522
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 99/136 (72%)
Query: 31 AEVVRCDTFLPQVELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPE 90
A VV+ + +LP L +LLVE D STRHI++ALL+ CSY V V + L+AW L+ +
Sbjct: 50 AHVVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSC 109
Query: 91 IDLILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKP 150
IDL+LTE+++P SG LLS IM H KNIPVIMMSS DS+ +V KC+ GA DFL+KP
Sbjct: 110 IDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKP 169
Query: 151 VRKNELTNLWQHVWRR 166
+RKNEL NLWQHVWRR
Sbjct: 170 IRKNELKNLWQHVWRR 185
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 39/50 (78%)
Query: 603 RSSHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQVSD 652
R + REAAL K+ LKRKERC+ KKVRY SRKK AEQRP VKGQF+ + D
Sbjct: 465 RWAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRKRDD 514
>AT5G02810.1 | Symbols: PRR7, APRR7 | pseudo-response regulator 7 |
chr5:638283-641461 REVERSE LENGTH=727
Length = 727
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 98/138 (71%)
Query: 29 RSAEVVRCDTFLPQVELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKG 88
++A V + FL + +LLVE D TR+I++ALLR CSY VV SNG++AW+ L+
Sbjct: 62 QTAATVCWERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLN 121
Query: 89 PEIDLILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLI 148
ID++LTE+ +P +SG LL I+ H +NIPVIMMSS DS+ +V KC+ KGA DFL+
Sbjct: 122 NHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLV 181
Query: 149 KPVRKNELTNLWQHVWRR 166
KP+RKNEL LWQHVWRR
Sbjct: 182 KPIRKNELKILWQHVWRR 199
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 3/60 (5%)
Query: 598 LIDAHRSSHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFV---CQVSDDN 654
L D ++ S REAALTK+ KRKERC+ KKVRYQSRKK AEQRPRV+GQFV +DDN
Sbjct: 660 LADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDDN 719
>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif
-containing response regulator protein |
chr5:24675540-24678176 FORWARD LENGTH=618
Length = 618
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 86/131 (65%)
Query: 37 DTFLPQVELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILT 96
D F+ + + ILL + D ++ + LL +CSY+V V + + +AL ++GP+ID+IL
Sbjct: 11 DGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILA 70
Query: 97 ELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNEL 156
E++LP G +L I + IPVIMMS QD V +V+KC+ GAAD+L+KP+R NEL
Sbjct: 71 EIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNEL 130
Query: 157 TNLWQHVWRRK 167
NLW H+WRR+
Sbjct: 131 LNLWTHMWRRR 141
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 607 REAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQVSDDN 654
RE AL K+ KR +RC+ KK+RY +RK+ AE+RPRVKGQFV +++ N
Sbjct: 533 REEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVN 580
>AT2G25180.1 | Symbols: ARR12, RR12 | response regulator 12 |
chr2:10724490-10726961 REVERSE LENGTH=596
Length = 596
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 78/126 (61%), Gaps = 5/126 (3%)
Query: 43 VELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPE 102
V + +L V+ D + I+ +LLR C Y V T + KA E L+ + DL+++++++P+
Sbjct: 15 VGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPD 74
Query: 103 ISGFALLSMI-MEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQ 161
+ GF LL ++ +E D +PVIM+S+ V+K + GA D+L+KPVR EL N+WQ
Sbjct: 75 MDGFKLLELVGLEMD----LPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 162 HVWRRK 167
HV R +
Sbjct: 131 HVVRSR 136
>AT3G16857.2 | Symbols: ARR1, RR1 | response regulator 1 |
chr3:5756113-5759139 FORWARD LENGTH=690
Length = 690
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 82/135 (60%), Gaps = 6/135 (4%)
Query: 45 LTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPEIS 104
L +L+V+ D + I+ +LR C Y V + A L+ D++++++ +P++
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 105 GFALLSMI-MEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQHV 163
GF LL + +E D +PVIMMS+ DS S+VLK + GA D+LIKPVR L N+WQHV
Sbjct: 97 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 164 WR-RKAVSSVPQNTA 177
R R++ SVP+++
Sbjct: 153 VRKRRSEWSVPEHSG 167
>AT3G16857.1 | Symbols: ARR1, RR1 | response regulator 1 |
chr3:5756113-5758853 FORWARD LENGTH=669
Length = 669
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 82/135 (60%), Gaps = 6/135 (4%)
Query: 45 LTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPEIS 104
L +L+V+ D + I+ +LR C Y V + A L+ D++++++ +P++
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 105 GFALLSMI-MEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQHV 163
GF LL + +E D +PVIMMS+ DS S+VLK + GA D+LIKPVR L N+WQHV
Sbjct: 97 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 164 WR-RKAVSSVPQNTA 177
R R++ SVP+++
Sbjct: 153 VRKRRSEWSVPEHSG 167
>AT4G31920.1 | Symbols: ARR10, RR10 | response regulator 10 |
chr4:15444290-15446766 REVERSE LENGTH=552
Length = 552
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 32 EVVRCDTFLPQVELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEI 91
E+ D F V + +L V+ D + I+ LL++C Y V T + A E L+ +
Sbjct: 6 EIEVLDQF--PVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKF 63
Query: 92 DLILTELELPEISGFALLSMI-MEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKP 150
DL+++++++P++ GF LL ++ +E D +PVIM+S+ V+K + GA D+L+KP
Sbjct: 64 DLVISDVDMPDMDGFKLLELVGLEMD----LPVIMLSAHSDPKYVMKGVKHGACDYLLKP 119
Query: 151 VRKNELTNLWQHVWR 165
VR EL N+WQHV R
Sbjct: 120 VRIEELKNIWQHVVR 134
>AT4G16110.1 | Symbols: ARR2, RR2 | response regulator 2 |
chr4:9112979-9115785 FORWARD LENGTH=664
Length = 664
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
Query: 45 LTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPEIS 104
L +L+V+ D + I+ +L C YRV + A L+ D++++++ +P++
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 105 GFALLSMI-MEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQHV 163
GF LL + +E D +PVIMMS+ DS S+VLK + GA D+LIKPVR L N+WQHV
Sbjct: 88 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHV 143
Query: 164 WRRK 167
R+K
Sbjct: 144 VRKK 147
>AT1G67710.1 | Symbols: ARR11 | response regulator 11 |
chr1:25376994-25378905 REVERSE LENGTH=521
Length = 521
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 43 VELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPE 102
V L +L+V+ D + I+ +L+KCSY V T +A L+ + D++++++ +P+
Sbjct: 9 VGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPD 68
Query: 103 ISGFALLSMI-MEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQ 161
+ GF LL + +E D +PVIMMS S V+K + GA D+L+KP+R EL +WQ
Sbjct: 69 MDGFKLLEHVGLELD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQ 124
Query: 162 HVWRRKAVSSVPQNTAFPQACNQSGGT 188
HV R+K Q + C GG
Sbjct: 125 HVLRKKL-----QEVRDIEGCGYEGGA 146
>AT2G01760.1 | Symbols: ARR14, RR14 | response regulator 14 |
chr2:333041-334514 FORWARD LENGTH=382
Length = 382
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 6/127 (4%)
Query: 45 LTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPEIS 104
L IL+V+ D S I+ +L + Y+V S A L+ + DL+L+++ +P ++
Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70
Query: 105 GFALLSMI--MEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQH 162
G+ LL + +E D +PVIMMS + V+ + GA D+LIKP+R EL N+WQH
Sbjct: 71 GYNLLQQVGLLEMD----LPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126
Query: 163 VWRRKAV 169
V RRK V
Sbjct: 127 VVRRKCV 133
>AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
9 | chr2:19233422-19234901 FORWARD LENGTH=351
Length = 351
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 126 MSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQHVWRRKAVSSVPQNTAFPQA 181
MSSQDS+ MVLKCML+GAAD+LIKP+RKNEL NLWQHVWRR + P TA Q+
Sbjct: 1 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRLTLRDDP--TAHAQS 54
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 605 SHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQVSDD 653
S REAAL K+ LKRK+RC+ KKVRYQSRKK AEQRPRVKGQFV V+ D
Sbjct: 298 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSD 346
>AT5G58080.1 | Symbols: ARR18, RR18 | response regulator 18 |
chr5:23501785-23504099 REVERSE LENGTH=618
Length = 618
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 67 CSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPEISGFALLSMIMEHDVCKNIPVIMM 126
C Y V KA E L+ DL+++++E+P+ GF LL + +E D +PVIM+
Sbjct: 23 CKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTDGFKLLEIGLEMD----LPVIML 78
Query: 127 SSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQHVWRR 166
S+ V+K ++ GA D+L+KPV EL N+W HV ++
Sbjct: 79 SAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKK 118
>AT2G46670.1 | Symbols: | CCT motif family protein |
chr2:19164589-19165233 REVERSE LENGTH=183
Length = 183
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 605 SHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQVSDD 653
S REAAL K+ LKRK+RC+ KKVRYQSRKK AEQRPRVKGQFV V+ D
Sbjct: 130 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSD 178
>AT3G57040.1 | Symbols: ARR9, ATRR4 | response regulator 9 |
chr3:21110059-21111228 FORWARD LENGTH=234
Length = 234
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 19/140 (13%)
Query: 47 ILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALK-------------SKGP---- 89
+L V+ R +I LL+K S +V TV +G KA E L SK P
Sbjct: 11 VLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQ 70
Query: 90 --EIDLILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFL 147
E++LI+T+ +P ++G+ LL + E ++IPV++MSS++ + + +C+ +GA +F
Sbjct: 71 VVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFF 130
Query: 148 IKPVRKNELTNLWQHVWRRK 167
+KPVR +L L H+ + K
Sbjct: 131 LKPVRLADLNKLKPHMMKTK 150
>AT1G19050.1 | Symbols: ARR7 | response regulator 7 |
chr1:6577919-6579078 REVERSE LENGTH=206
Length = 206
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 44 ELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPE---------IDLI 94
EL +L V+ R +I LLR S +V TV +G +A + L G + ++LI
Sbjct: 23 ELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLI 82
Query: 95 LTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKN 154
+T+ +P +SG+ LL I E + +PV++MSS++ + + +C+ +GA +FL+KPV+
Sbjct: 83 VTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLA 142
Query: 155 ELTNLWQHVWRRKA 168
++ + Q + R +A
Sbjct: 143 DVKRIKQLIMRNEA 156
>AT1G74890.1 | Symbols: ARR15 | response regulator 15 |
chr1:28131590-28132710 REVERSE LENGTH=206
Length = 206
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 44 ELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGP---------EIDLI 94
EL +L V+ R +I LL+ + +V TV +G +A + L G +++LI
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLI 76
Query: 95 LTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKN 154
+T+ +P ++G+ LL I E + IPV++MSS++ + +CM++GA +FL+KPV+
Sbjct: 77 VTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLA 136
Query: 155 ELTNLWQHVWR 165
++ L + + R
Sbjct: 137 DVKRLKELIMR 147
>AT2G41310.1 | Symbols: ATRR3, ARR8, RR3 | response regulator 3 |
chr2:17222280-17223536 FORWARD LENGTH=225
Length = 225
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 17/138 (12%)
Query: 47 ILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALK-----------SKGP------ 89
+L V+ R +I LL+K S +V TV +G KA E L S P
Sbjct: 11 VLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQEV 70
Query: 90 EIDLILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIK 149
EI+LI+T+ +P ++G+ LL + E ++IPV++MSS++ + + +C+ +GA +F +K
Sbjct: 71 EINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLK 130
Query: 150 PVRKNELTNLWQHVWRRK 167
PV+ +LT L H+ + K
Sbjct: 131 PVKLADLTKLKPHMMKTK 148
>AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | response regulator
4 | chr1:3442624-3443759 REVERSE LENGTH=259
Length = 259
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 75/134 (55%), Gaps = 15/134 (11%)
Query: 44 ELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPE------------I 91
E+ +L V+ R +I LLR S +V V +G W AL+ G + +
Sbjct: 33 EVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSG---WRALEFLGLDNEKASAEFDRLKV 89
Query: 92 DLILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPV 151
DLI+T+ +P ++G+ LL I E + +PV++MSS++ ++ + +C+ +GA DFL+KPV
Sbjct: 90 DLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPV 149
Query: 152 RKNELTNLWQHVWR 165
+ ++ L H+ +
Sbjct: 150 KLADVKRLRSHLTK 163
>AT5G62920.1 | Symbols: ARR6 | response regulator 6 |
chr5:25252745-25254158 REVERSE LENGTH=186
Length = 186
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 45 LTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEAL------KSKGPE---IDLIL 95
L +L V+ H R I LLR S +V V + +A + L KS G E ++LI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 96 TELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNE 155
T+ +P ++G+ LL I E + +PV++MSS++ + + +C+ +GA DFL+KPV+ ++
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
Query: 156 LTNLWQHVWRRKAVS 170
+ L + + + +S
Sbjct: 145 VKRLRDSLMKVEDLS 159
>AT1G59940.1 | Symbols: ARR3 | response regulator 3 |
chr1:22065894-22066895 REVERSE LENGTH=231
Length = 231
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 47 ILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWE---------ALKSKGPEIDLILTE 97
+L V+ R +I LLR S +V V +G +A E A++ ++DLI+T+
Sbjct: 35 VLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLIITD 94
Query: 98 LELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELT 157
+P ++G+ LL I E K +PV++MSS++ ++ + +C+ +GA DFL+KPV+ ++
Sbjct: 95 YCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLADVK 154
Query: 158 NLWQHVWRRKAVSS 171
L ++ R V++
Sbjct: 155 RLRSYLTRDVKVAA 168
>AT1G49190.1 | Symbols: ARR19, RR19 | response regulator 19 |
chr1:18191342-18193598 FORWARD LENGTH=608
Length = 608
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 47 ILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPEISGF 106
+L+V+ + +T + ++++ +Y+V ++ KA L S EI++++ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 107 ALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQHVWRR 166
L I ++PV++MS + V+K GA D+++KPV++ + N+WQH+ R+
Sbjct: 96 QALKSITSK---LDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 167 KAV 169
+ +
Sbjct: 153 RLI 155
>AT1G49190.2 | Symbols: RR19 | response regulator 19 |
chr1:18191342-18193598 FORWARD LENGTH=622
Length = 622
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 47 ILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPEISGF 106
+L+V+ + +T + ++++ +Y+V ++ KA L S EI++++ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 107 ALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQHVWRR 166
L I ++PV++MS + V+K GA D+++KPV++ + N+WQH+ R+
Sbjct: 96 QALKSITSK---LDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 167 KAV 169
+ +
Sbjct: 153 RLI 155
>AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6, RR5 | response regulator
5 | chr3:17759112-17760740 REVERSE LENGTH=184
Length = 184
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 45 LTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGP----------EIDLI 94
L +L V+ R I LLR S +V V + +A + L G +I+LI
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84
Query: 95 LTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKN 154
+T+ +P ++G+ LL I E + IPV++MSS++ + + +C+ +GA DFL+KPV+
Sbjct: 85 MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLA 144
Query: 155 ELTNL 159
++ L
Sbjct: 145 DVKRL 149
>AT3G56380.1 | Symbols: ARR17, RR17 | response regulator 17 |
chr3:20905480-20906368 FORWARD LENGTH=153
Length = 153
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 44 ELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPE----------IDL 93
EL +L V+ + R ++ +L+ S +V T NGL+A E L P+ ++L
Sbjct: 19 ELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNL 78
Query: 94 ILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRK 153
I+T+ +P ++GF LL + E K +PV+++SS++ + + KC+ GA F+ KP++
Sbjct: 79 IITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKL 138
Query: 154 NELTNLWQHVW 164
+++ L H+
Sbjct: 139 SDVEKLKCHLL 149
>AT1G68210.1 | Symbols: APRR6, PRR6 | pseudo-response regulator 6 |
chr1:25565983-25569302 FORWARD LENGTH=755
Length = 755
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 44 ELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPEI 103
+++ILL++ D ++ ++++L++ S RV++V KA ++ + EI LI+ +E+P I
Sbjct: 12 DISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHI 71
Query: 104 SGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQHV 163
+ L+ ++ K+IP+I+++ + + K A L KP+ +++ N+WQHV
Sbjct: 72 DSHSFLNALL----LKDIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHV 127
Query: 164 WRRKA 168
+ +K+
Sbjct: 128 FSKKS 132
>AT3G62670.1 | Symbols: ARR20, MEE41, RR20 | response regulator 20 |
chr3:23176556-23177922 REVERSE LENGTH=352
Length = 352
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 90 EIDLILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIK 149
EIDL++ + +P+I+G L++I + ++PV++MS + V++ + GA DFL+K
Sbjct: 10 EIDLVIWDFHMPDINGLDALNIIGKQ---MDLPVVIMSHEYKKETVMESIKYGACDFLVK 66
Query: 150 PVRKNELTNLWQHVWRRKAVSS 171
PV K + LW+HV+R++ S
Sbjct: 67 PVSKEVIAVLWRHVYRKRMSKS 88
>AT5G49240.1 | Symbols: APRR4, PRR4 | pseudo-response regulator 4 |
chr5:19962934-19964351 FORWARD LENGTH=292
Length = 292
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 45 LTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPEIS 104
L +L+ + D S I+ L+K Y+V + KA L++ DL + ++ E
Sbjct: 42 LRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGD 101
Query: 105 GFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQHVW 164
F LS I ++P+I++S DSV V K M+ GAAD+LIKP+R +L +++H+
Sbjct: 102 IFRFLSEIGSE---MDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLV 158
Query: 165 -----RRKAVSSVPQNTAFPQACNQSGGTV 189
RR V+ + A ++ + T+
Sbjct: 159 KKMRERRSVVTGEAEKAAGEKSSSVGDSTI 188
>AT5G07210.1 | Symbols: ARR21, RR21 | response regulator 21 |
chr5:2252237-2256018 FORWARD LENGTH=621
Length = 621
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 43 VELTILLVEPDHSTRHIISALLRKCSYR--------VVTVSNGLKAWEALKSKGPEIDLI 94
+++ +++V+ DH I+S +L+ YR V+ V + KA LK + IDLI
Sbjct: 14 LKINVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRDNIDLI 73
Query: 95 LTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQ-DSVSMVLKCMLKGAADFLIKPVRK 153
+T+ +P ++G L I + N+PV++MSS + L C GA F+ KP+
Sbjct: 74 ITDYYMPGMNGLQLKKQITQE--FGNLPVLVMSSDTNKEEESLSC---GAMGFIPKPIHP 128
Query: 154 NELTNLWQHVWRRK 167
+LT ++Q K
Sbjct: 129 TDLTKIYQFALSNK 142
>AT2G40670.1 | Symbols: ARR16, RR16 | response regulator 16 |
chr2:16970258-16971120 FORWARD LENGTH=164
Length = 164
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 44 ELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWE------------ALKSKGPEI 91
EL +L V+ + R ++ LL+ +V T N L+A E AL ++
Sbjct: 28 ELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKV 87
Query: 92 DLILTELELPEISGFALLSMIMEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKPV 151
LI+T+ +P ++GF LL + E + +PV++MSS++ + + KC+ GA F+ KP+
Sbjct: 88 SLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPL 147
Query: 152 RKNELTNLWQHVW 164
+ ++ L H+
Sbjct: 148 KLADVEKLKCHLM 160
>AT4G00760.1 | Symbols: APRR8, PRR8 | pseudo-response regulator 8 |
chr4:327236-328955 REVERSE LENGTH=336
Length = 336
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 63 LLRKCSYRVVTVSNGLKAWEALKSKGPEIDLILTELELPEISGFALLSMIMEHDVCKNIP 122
++RKC Y+VV + + +K +IDL+L E L E++ + LL I +C+ IP
Sbjct: 1 MIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRLIEMNKYELLEKI--RSICE-IP 57
Query: 123 VIMMSSQDSVSMVLKCMLKGAADFLIKPVRKNELTNLWQHVWRRK 167
V+ +S +++C+ +GA L KP+ +N+ LWQ R+
Sbjct: 58 VV-VSGAHVKDAIVECLCRGAKLCLEKPLMENDFKILWQFTVSRQ 101
>AT5G14370.1 | Symbols: | CCT motif family protein |
chr5:4632147-4633651 REVERSE LENGTH=339
Length = 339
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 606 HREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFV 647
HREA+L +Y KR+ R + K++RYQ RK AE+RPRVKG+FV
Sbjct: 293 HREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFV 334
>AT5G57180.2 | Symbols: CIA2 | chloroplast import apparatus 2 |
chr5:23168393-23170763 FORWARD LENGTH=435
Length = 435
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 604 SSHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQVSDDNPA 656
S REA++ +Y KR+ R + KK+RYQ RK A+QRPR+KG+FV + ++ P+
Sbjct: 380 SGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRRPNESTPS 432
>AT2G40670.2 | Symbols: RR16 | response regulator 16 |
chr2:16970258-16971120 FORWARD LENGTH=165
Length = 165
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 13/134 (9%)
Query: 44 ELTILLVEPDHSTRHIISALLRKCSYRVVTVSNGLKAWE------------ALKSKGPEI 91
EL +L V+ + R ++ LL+ +V T N L+A E AL ++
Sbjct: 28 ELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKV 87
Query: 92 DLILTELELPEISGFALLSMI-MEHDVCKNIPVIMMSSQDSVSMVLKCMLKGAADFLIKP 150
LI+T+ +P ++GF LL + E + +PV++MSS++ + + KC+ GA F+ KP
Sbjct: 88 SLIITDYCMPGMTGFELLKKVKQESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKP 147
Query: 151 VRKNELTNLWQHVW 164
++ ++ L H+
Sbjct: 148 LKLADVEKLKCHLM 161
>AT4G25990.1 | Symbols: CIL | CCT motif family protein |
chr4:13191937-13193543 REVERSE LENGTH=394
Length = 394
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 604 SSHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFV 647
S REA++ +Y KR+ R + KK+RYQ RK A+QRPR+KG+FV
Sbjct: 338 SGMREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFV 381
>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
chr5:8589325-8590949 FORWARD LENGTH=406
Length = 406
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 604 SSHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQVSDDNPATDAGG 661
S+ REA + +Y KRK R + K +RY SRK +AE RPR+KG+F + +D N + D G
Sbjct: 336 SAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFA-KRTDTNESNDVVG 392
>AT1G07050.1 | Symbols: | CCT motif family protein |
chr1:2164327-2165133 REVERSE LENGTH=195
Length = 195
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 594 GGFRLIDAHRSSHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFV 647
G +I+ R+ REA++ +Y KR+ R + KK+RYQ RK A++RPR KG+FV
Sbjct: 138 GEVPVIEEKRNMRREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFV 191
>AT1G73870.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:27779214-27780522 FORWARD LENGTH=392
Length = 392
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 605 SHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQVS 651
REA + +Y KR+ R + KK+RY+ RK AEQRPR+KG+FV + S
Sbjct: 343 GEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTS 389
>AT2G27070.1 | Symbols: ARR13, RR13 | response regulator 13 |
chr2:11555781-11560215 REVERSE LENGTH=575
Length = 575
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 11/136 (8%)
Query: 43 VELTILLVEPDHSTRHIISALLRKCSYR---VVTVSNGLKAWEALKSKGPEIDLILTELE 99
+++ +++V+ + I S +L K YR V+ V KA LK++ IDLI+T+
Sbjct: 14 LKINVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYY 73
Query: 100 LPEISGFALLSMIMEHDVCKNIPVIMMSSQ-DSVSMVLKCMLKGAADFLIKPVRKNELTN 158
+P ++G L I + N+ V++MSS + L C GA F+ KP+ +L
Sbjct: 74 MPGMNGLQLKKQITQE--FGNLSVLVMSSDPNKEEESLSC---GAMGFIPKPIAPTDLPK 128
Query: 159 LWQH--VWRRKAVSSV 172
++Q ++R S++
Sbjct: 129 IYQFALTYKRNGKSTL 144
>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
chr5:23355573-23356729 FORWARD LENGTH=355
Length = 355
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 604 SSHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFVCQVSDDN 654
S REA + +Y KRK R + K +RY SRK +AE RPR+KG+F + +N
Sbjct: 282 SMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETEN 332
>AT1G68520.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:25709331-25710749 REVERSE LENGTH=406
Length = 406
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 595 GFRLIDAHRSSHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFV 647
G L DA REA +++Y KR+ R + KK+RY+ RK AE+RPR+KG+FV
Sbjct: 346 GLHLGDAGDGG-REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 397
>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567946 FORWARD LENGTH=294
Length = 294
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 605 SHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQF 646
+ REA + +Y KRK R + K +RY SRK +AE RPR+KG+F
Sbjct: 227 AEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRF 268
>AT1G25440.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:8933939-8935284 REVERSE LENGTH=417
Length = 417
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 607 REAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFV 647
REA +++Y KR+ R + KK+RY+ RK AE+RPR+KG+FV
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 401
>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
chr5:5176297-5177473 REVERSE LENGTH=355
Length = 355
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 607 REAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFV 647
REA + +Y K+K R + K +RY SRK +AE+RPR+KG+F
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFA 326
>AT1G49130.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:18174741-18175936 REVERSE LENGTH=326
Length = 326
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 605 SHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFV 647
S REA + +Y KRK R + KK+RY+ RK A++RPR+KG+FV
Sbjct: 276 SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFV 318
>AT1G49130.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:18174741-18175811 REVERSE LENGTH=319
Length = 319
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 605 SHREAALTKYLLKRKERCYVKKVRYQSRKKFAEQRPRVKGQFV 647
S REA + +Y KRK R + KK+RY+ RK A++RPR+KG+FV
Sbjct: 269 SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFV 311