Miyakogusa Predicted Gene

Lj3g3v2515360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2515360.1 Non Chatacterized Hit- tr|Q2QVC1|Q2QVC1_ORYSJ
Argininosuccinate synthase, chloroplast, putative,
exp,80.7,3e-19,Arginosuc_synth,Argininosuccinate synthase; no
description,Argininosuccinate synthetase,
catalytic/m,NODE_58279_length_206_cov_131.689316.path1.1
         (57 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24830.1 | Symbols:  | arginosuccinate synthase family | chr4...   106   3e-24
AT4G24830.2 | Symbols:  | arginosuccinate synthase family | chr4...   106   4e-24

>AT4G24830.1 | Symbols:  | arginosuccinate synthase family |
           chr4:12793085-12795857 REVERSE LENGTH=494
          Length = 494

 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 55/57 (96%)

Query: 1   MYMMSVDPEDAPDKPEYVEIGIEAGLPVSVNGKRLSPASLLAELNEIGGRHGIGRVD 57
           MYMMSVDPEDAPD+PEY+EIGIE+GLPV++NGK LSPA+LLAELN IGG+HGIGR+D
Sbjct: 296 MYMMSVDPEDAPDQPEYIEIGIESGLPVALNGKALSPATLLAELNTIGGKHGIGRID 352


>AT4G24830.2 | Symbols:  | arginosuccinate synthase family |
           chr4:12793085-12795857 REVERSE LENGTH=450
          Length = 450

 Score =  106 bits (264), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 55/57 (96%)

Query: 1   MYMMSVDPEDAPDKPEYVEIGIEAGLPVSVNGKRLSPASLLAELNEIGGRHGIGRVD 57
           MYMMSVDPEDAPD+PEY+EIGIE+GLPV++NGK LSPA+LLAELN IGG+HGIGR+D
Sbjct: 296 MYMMSVDPEDAPDQPEYIEIGIESGLPVALNGKALSPATLLAELNTIGGKHGIGRID 352