Miyakogusa Predicted Gene

Lj3g3v2515230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2515230.1 CUFF.44105.1
         (393 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32900.1 | Symbols:  | UDP-Glycosyltransferase superfamily pr...   582   e-166
AT3G01180.1 | Symbols: AtSS2, SS2 | starch synthase 2 | chr3:624...   286   2e-77
AT5G24300.2 | Symbols: SSI1 | Glycogen/starch synthases, ADP-glu...   260   1e-69
AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | Glycogen/starch syntha...   260   1e-69
AT1G11720.1 | Symbols: ATSS3, SS3 | starch synthase 3 | chr1:395...   176   3e-44
AT1G11720.2 | Symbols: SS3 | starch synthase 3 | chr1:3951597-39...   176   4e-44
AT4G18240.1 | Symbols: ATSS4, SSIV, SS4 | starch synthase 4 | ch...   168   6e-42

>AT1G32900.1 | Symbols:  | UDP-Glycosyltransferase superfamily
           protein | chr1:11920582-11923506 REVERSE LENGTH=610
          Length = 610

 Score =  582 bits (1500), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 273/385 (70%), Positives = 320/385 (83%)

Query: 9   GEDVIFIANDWHTALIPCYLKSMYQSIGIYKNARVVYCIHNIAYQGRFAFADFQLLNLPD 68
           GEDV+F+ANDWHTAL+PCYLKSMYQS G+Y NA+VV+CIHNIAYQGRFAF D+ LLNLP 
Sbjct: 226 GEDVVFVANDWHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPI 285

Query: 69  QFKSSFDFLDGHVKPVIGRKTNWMKAGILESDLVLTVSPYYAEELVSGPDKGVELDNIIR 128
            FKSSFDF+DG+ KPV GRK NWMKA ILE+  VLTVSPYYA+EL+SG D+GVEL   +R
Sbjct: 286 SFKSSFDFMDGYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLR 345

Query: 129 RTGITGIVNGMDVQEWNPSTDKYLTVKYNASTVVEGKALLKEALQAEVGLPVDRNIPLIG 188
              ++GI+NGMDVQEWNPSTDKY+ +KY+ +TV + K L+KEALQA VGLPVDR++P+IG
Sbjct: 346 MKTVSGIINGMDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIG 405

Query: 189 FIGRLEEQKGSDILVAAIPQFIKENIQIVALGTGKKQMEKQLEQLEIAYPDKARGVAKFN 248
           FIGRLEEQKGSDILV AI +F+  N+Q+V LGTGKK+ME Q+ +LE  +P KA GVAKFN
Sbjct: 406 FIGRLEEQKGSDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFN 465

Query: 249 VPLAHMIIAGADFILIPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGS 308
           VPLAHMI AGADFI++PSRFEPCGLIQL AMRYGTVPIVASTGGLVDTVK+G+TGF +G 
Sbjct: 466 VPLAHMITAGADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGR 525

Query: 309 FNVECEAVDPADVDALAKTVKRALAVHGTLAFTEIIKNCMAQDLSWKGPAKRWEEVLLSL 368
           FNV+CE VDP DV A AK V RA+AV+GT A  E++KNCM QD SWKGPA+ WE+VLLSL
Sbjct: 526 FNVKCEVVDPDDVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSL 585

Query: 369 GVPGSXXXXXXXXXXPQAKENLATP 393
            V GS          P AKEN+ATP
Sbjct: 586 NVAGSEAGTEGEEIAPLAKENVATP 610


>AT3G01180.1 | Symbols: AtSS2, SS2 | starch synthase 2 |
           chr3:62456-65678 REVERSE LENGTH=792
          Length = 792

 Score =  286 bits (731), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 163/365 (44%), Positives = 215/365 (58%), Gaps = 17/365 (4%)

Query: 11  DVIFIANDWHTALIPCYLKSMYQSIGIYKNARVVYCIHNIAYQGRFAFADFQLLNLPDQF 70
           ++ FIANDWHTAL+P YLK+ Y+  GI K  R V  IHNIA+QGR    DF  ++LP  +
Sbjct: 432 NLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNIAHQGRGPVDDFSYVDLPSHY 491

Query: 71  KSSFDFLDGHVKPVIGRKTNWMKAGILESDLVLTVSPYYAEELVSGPDKGVELDNIIRRT 130
             SF   D    PV G   N   AG+  +D VLTVS  Y+ E V   + G  L NII   
Sbjct: 492 LDSFKLYD----PVGGEHFNIFAAGLKAADRVLTVSHGYSWE-VKTLEGGWGLHNIINEN 546

Query: 131 G--ITGIVNGMDVQEWNPSTDKYLT----VKYNASTVVEGKALLKEALQAEVGLPVDRNI 184
                GIVNG+D QEWNP  D YL       Y+   +  GK   K ALQ E+GLPV  ++
Sbjct: 547 DWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLENLHIGKPQCKAALQKELGLPVRPDV 606

Query: 185 PLIGFIGRLEEQKGSDILVAAIPQFIKENIQIVALGTGKKQMEKQLEQLEIAYPDKARGV 244
           PLIGFIGRL+ QKG D++  A+P  + +++Q+V LGTG+  +E+ L Q+E  Y DKARG 
Sbjct: 607 PLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLGTGRPDLEEVLRQMEHQYRDKARGW 666

Query: 245 AKFNVPLAHMIIAGADFILIPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGF 304
             F+V  AH I AGAD +L+PSRFEPCGL QL AM YGT+P+V + GGL DTV++    F
Sbjct: 667 VGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMNYGTIPVVHAVGGLRDTVQQ----F 722

Query: 305 QMGSFNVECEAVDPADVDALAKTVKRALAVHGTL--AFTEIIKNCMAQDLSWKGPAKRWE 362
              S        D A+   L   +   L  +     ++  + +  M QDLSW   A+++E
Sbjct: 723 DPYSETGLGWTFDSAEAGKLIHALGNCLLTYREYKESWEGLQRRGMTQDLSWDNAAEKYE 782

Query: 363 EVLLS 367
           EVL++
Sbjct: 783 EVLVA 787


>AT5G24300.2 | Symbols: SSI1 | Glycogen/starch synthases,
           ADP-glucose type | chr5:8266934-8270860 FORWARD
           LENGTH=652
          Length = 652

 Score =  260 bits (664), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/373 (39%), Positives = 216/373 (57%), Gaps = 20/373 (5%)

Query: 6   FHAGEDVIFIANDWHTALIPCYLKSMYQSIGIYKNARVVYCIHNIAYQGRFAFADFQLLN 65
           F  GE  +F+ NDWH  L+P  L + Y+  G+YK+AR +  IHN+A+QG    A +  L 
Sbjct: 276 FTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLG 335

Query: 66  LPDQFKSSFDFLDGHVKPV--------IGRKTNWMKAGILESDLVLTVSPYYAEELVSGP 117
           LP ++  +     G V P          G   N +K  I+ SD ++TVS  YA E+ +  
Sbjct: 336 LPSEWYGAV----GWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQGYAWEITT-V 390

Query: 118 DKGVELDNII--RRTGITGIVNGMDVQEWNPSTDKYLTVKYNASTVVEGKALLKEALQAE 175
           + G  L +++  R++ I GI NG++V EWNPSTD+++   Y+A  V E K   K ALQ E
Sbjct: 391 EGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSE-KIKCKMALQKE 449

Query: 176 VGLPVDRNIPLIGFIGRLEEQKGSDILVAAIPQFIKENIQIVALGTGKKQMEKQLEQLEI 235
           +GLP+    P+IGFIGRL+ QKG D++  A P  + ++IQ V LG+G  + E  +  +E 
Sbjct: 450 LGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEE 509

Query: 236 AYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCGLIQLQAMRYGTVPIVASTGGLVD 295
            Y DK RG   FNVP++H I AG D +L+PSRFEPCGL QL AMRYGT+P+V  TGGL D
Sbjct: 510 TYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRD 569

Query: 296 TVKEGFTGFQMGSFNVECEAV-DPADVDALAKTVKRALAVHGTL--AFTEIIKNCMAQDL 352
           TV E F  +  G        V  P   D++   ++ A A +     ++  +++  M ++ 
Sbjct: 570 TV-ENFNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAATYREYKQSWEGLMRRGMTRNY 628

Query: 353 SWKGPAKRWEEVL 365
           SW+  A ++E+V 
Sbjct: 629 SWENAAVQYEQVF 641


>AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | Glycogen/starch
           synthases, ADP-glucose type | chr5:8266934-8270860
           FORWARD LENGTH=652
          Length = 652

 Score =  260 bits (664), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/373 (39%), Positives = 216/373 (57%), Gaps = 20/373 (5%)

Query: 6   FHAGEDVIFIANDWHTALIPCYLKSMYQSIGIYKNARVVYCIHNIAYQGRFAFADFQLLN 65
           F  GE  +F+ NDWH  L+P  L + Y+  G+YK+AR +  IHN+A+QG    A +  L 
Sbjct: 276 FTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLG 335

Query: 66  LPDQFKSSFDFLDGHVKPV--------IGRKTNWMKAGILESDLVLTVSPYYAEELVSGP 117
           LP ++  +     G V P          G   N +K  I+ SD ++TVS  YA E+ +  
Sbjct: 336 LPSEWYGAV----GWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQGYAWEITT-V 390

Query: 118 DKGVELDNII--RRTGITGIVNGMDVQEWNPSTDKYLTVKYNASTVVEGKALLKEALQAE 175
           + G  L +++  R++ I GI NG++V EWNPSTD+++   Y+A  V E K   K ALQ E
Sbjct: 391 EGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSE-KIKCKMALQKE 449

Query: 176 VGLPVDRNIPLIGFIGRLEEQKGSDILVAAIPQFIKENIQIVALGTGKKQMEKQLEQLEI 235
           +GLP+    P+IGFIGRL+ QKG D++  A P  + ++IQ V LG+G  + E  +  +E 
Sbjct: 450 LGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEE 509

Query: 236 AYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCGLIQLQAMRYGTVPIVASTGGLVD 295
            Y DK RG   FNVP++H I AG D +L+PSRFEPCGL QL AMRYGT+P+V  TGGL D
Sbjct: 510 TYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRD 569

Query: 296 TVKEGFTGFQMGSFNVECEAV-DPADVDALAKTVKRALAVHGTL--AFTEIIKNCMAQDL 352
           TV E F  +  G        V  P   D++   ++ A A +     ++  +++  M ++ 
Sbjct: 570 TV-ENFNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAATYREYKQSWEGLMRRGMTRNY 628

Query: 353 SWKGPAKRWEEVL 365
           SW+  A ++E+V 
Sbjct: 629 SWENAAVQYEQVF 641


>AT1G11720.1 | Symbols: ATSS3, SS3 | starch synthase 3 |
            chr1:3952460-3956840 FORWARD LENGTH=1042
          Length = 1042

 Score =  176 bits (445), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 174/385 (45%), Gaps = 62/385 (16%)

Query: 2    FEFFFHAGEDV---------IFIANDWHTALIPCYLKSMYQSIGIYKNARVVYCIHNIAY 52
            F FF HA  +          I   +DW +A +    K  Y   G+ K  R+V+ IHN+ +
Sbjct: 698  FGFFCHAALEFLLQGGFHPDILHCHDWSSAPVSWLFKDHYTQYGLIK-TRIVFTIHNLEF 756

Query: 53   QGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMKAGILESDLVLTVSPYYAEE 112
                                            IG+   +       +D   TVSP YA+E
Sbjct: 757  GAN----------------------------AIGKAMTF-------ADKATTVSPTYAKE 781

Query: 113  LVSGPDKGVELDNIIRRTGITGIVNGMDVQEWNPSTDKYLTVKYNASTVVEGKALLKEAL 172
            +         L          GI+NG+D   W+P  D ++ V Y +  VVEGK   KE L
Sbjct: 782  VAGNSVISAHL------YKFHGIINGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEEL 835

Query: 173  QAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAIPQFIKENIQIVALGTG-----KKQME 227
            Q  +GL    + P++G I RL  QKG  ++  AI + ++ N Q+V LG+      +    
Sbjct: 836  QNRLGLK-SADFPVVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFV 894

Query: 228  KQLEQLEIAYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCGLIQLQAMRYGTVPIV 287
                QL  ++ D+AR V  ++ PL+H+I AGADFIL+PS FEPCGL QL AMRYG VP+V
Sbjct: 895  NLANQLHSSHGDRARLVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGAVPVV 954

Query: 288  ASTGGLVDT---VKEGFTGFQMGSFNVECEAVDPADVDALAKTVKRALAV--HGTLAFTE 342
              TGGL DT   V       Q         + D AD   +   + RA++    G   F  
Sbjct: 955  RKTGGLFDTVFDVDHDKERAQAQVLEPNGFSFDGADAPGVDYALNRAISAWYDGREWFNS 1014

Query: 343  IIKNCMAQDLSWKGPAKRWEEVLLS 367
            + K  M QD SW  PA  + E+  S
Sbjct: 1015 LCKTVMEQDWSWNRPALEYLELYHS 1039


>AT1G11720.2 | Symbols: SS3 | starch synthase 3 | chr1:3951597-3956840
            FORWARD LENGTH=1094
          Length = 1094

 Score =  176 bits (445), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 174/385 (45%), Gaps = 62/385 (16%)

Query: 2    FEFFFHAGEDV---------IFIANDWHTALIPCYLKSMYQSIGIYKNARVVYCIHNIAY 52
            F FF HA  +          I   +DW +A +    K  Y   G+ K  R+V+ IHN+ +
Sbjct: 750  FGFFCHAALEFLLQGGFHPDILHCHDWSSAPVSWLFKDHYTQYGLIK-TRIVFTIHNLEF 808

Query: 53   QGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMKAGILESDLVLTVSPYYAEE 112
                                            IG+   +       +D   TVSP YA+E
Sbjct: 809  GAN----------------------------AIGKAMTF-------ADKATTVSPTYAKE 833

Query: 113  LVSGPDKGVELDNIIRRTGITGIVNGMDVQEWNPSTDKYLTVKYNASTVVEGKALLKEAL 172
            +         L          GI+NG+D   W+P  D ++ V Y +  VVEGK   KE L
Sbjct: 834  VAGNSVISAHL------YKFHGIINGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEEL 887

Query: 173  QAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAIPQFIKENIQIVALGTG-----KKQME 227
            Q  +GL    + P++G I RL  QKG  ++  AI + ++ N Q+V LG+      +    
Sbjct: 888  QNRLGLK-SADFPVVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFV 946

Query: 228  KQLEQLEIAYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCGLIQLQAMRYGTVPIV 287
                QL  ++ D+AR V  ++ PL+H+I AGADFIL+PS FEPCGL QL AMRYG VP+V
Sbjct: 947  NLANQLHSSHGDRARLVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGAVPVV 1006

Query: 288  ASTGGLVDT---VKEGFTGFQMGSFNVECEAVDPADVDALAKTVKRALAV--HGTLAFTE 342
              TGGL DT   V       Q         + D AD   +   + RA++    G   F  
Sbjct: 1007 RKTGGLFDTVFDVDHDKERAQAQVLEPNGFSFDGADAPGVDYALNRAISAWYDGREWFNS 1066

Query: 343  IIKNCMAQDLSWKGPAKRWEEVLLS 367
            + K  M QD SW  PA  + E+  S
Sbjct: 1067 LCKTVMEQDWSWNRPALEYLELYHS 1091


>AT4G18240.1 | Symbols: ATSS4, SSIV, SS4 | starch synthase 4 |
            chr4:10082221-10087044 FORWARD LENGTH=1040
          Length = 1040

 Score =  168 bits (425), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 192/384 (50%), Gaps = 40/384 (10%)

Query: 2    FEFFFHAGE--DVIFIANDWHTALIPCYLKSMYQSIGIYKNARVVYCIHNIAYQGRFAFA 59
             E    +G+  D+I   +DW TA +      +Y   G+  +AR+ +  HN  YQG  + +
Sbjct: 661  LELLLQSGKKPDIIH-CHDWQTAFVAPLYWDLYAPKGL-DSARICFTCHNFEYQGTASAS 718

Query: 60   -------DFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMKAGILESDLVLTVSPYYAEE 112
                   D   LN PD+ +              G + N +K  I+ S++V TVSP YA+E
Sbjct: 719  ELGSCGLDVNQLNRPDRMQDHSS----------GDRVNPVKGAIIFSNIVTTVSPTYAQE 768

Query: 113  LVSGPD-KGVELDNIIRRTGITGIVNGMDVQEWNPSTDKYLTVKYNASTVVEGKALLKEA 171
            + +    KG+            GI+NG+D   WNP+TD +L  ++NA  + +GK   K A
Sbjct: 769  VRTAEGGKGLHSTLNFHSKKFIGILNGIDTDSWNPATDPFLKAQFNAKDL-QGKEENKHA 827

Query: 172  LQAEVGLP-VDRNIPLIGFIGRLEEQKGSDILVAAIPQFIKENIQIVALGTGK-KQMEKQ 229
            L+ ++GL   +   PL+G I RL  QKG  ++  AI + ++   Q V LG+     ++++
Sbjct: 828  LRKQLGLSSAESRRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPHIQRE 887

Query: 230  LEQLEIAYP--DKARGVAKFNVPLAHMIIAGADFILIPSRFEPCGLIQLQAMRYGTVPIV 287
             E +E  +   D  R + K++  L+H I A +D  +IPS FEPCGL Q+ AMRYG++PI 
Sbjct: 888  FEGIEQQFKSHDHVRLLLKYDEALSHTIYAASDLFIIPSIFEPCGLTQMIAMRYGSIPIA 947

Query: 288  ASTGGLVDTVKEGF-----TGFQMGSFNVECEAVDPADVDALAKTVKRALAVH--GTLAF 340
              TGGL D+V +       T FQ G F  +      AD       ++RA   +      +
Sbjct: 948  RKTGGLNDSVFDIDDDTIPTQFQNG-FTFQT-----ADEQGFNYALERAFNHYKKDEEKW 1001

Query: 341  TEIIKNCMAQDLSWKGPAKRWEEV 364
              +++  M+ D SW   A ++EE+
Sbjct: 1002 MRLVEKVMSIDFSWGSSATQYEEL 1025