Miyakogusa Predicted Gene

Lj3g3v2480930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2480930.1 Non Chatacterized Hit- tr|I3S2U9|I3S2U9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,2e-39,CYTOCHROME_B5_1,Cytochrome b5, heme-binding site;
Cyt-b5,Cytochrome b5; no description,Cytochrome b5,CUFF.44137.1
         (79 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53560.1 | Symbols: ATB5-A, B5 #2, ATCB5-E, CB5-E | cytochrom...   125   4e-30
AT2G32720.1 | Symbols: B5 #4, ATCB5-B, CB5-B | cytochrome B5 iso...   115   8e-27
AT5G48810.1 | Symbols: ATB5-B, B5 #3, ATCB5-D, CB5-D | cytochrom...   108   5e-25
AT1G26340.1 | Symbols: B5 #6, ATCB5-A, CB5-A | cytochrome B5 iso...   102   4e-23
AT2G46650.1 | Symbols: B5 #1, ATCB5-C, CB5-C | cytochrome B5 iso...    98   9e-22
AT1G37130.1 | Symbols: NIA2, B29, NIA2-1, CHL3, NR, NR2, ATNR2 |...    77   3e-15
AT1G77760.1 | Symbols: NIA1, GNR1, NR1 | nitrate reductase 1 | c...    72   9e-14
AT1G60660.1 | Symbols: B5 #5, ATCB5LP, CB5LP | cytochrome B5-lik...    66   4e-12
AT3G61580.1 | Symbols:  | Fatty acid/sphingolipid desaturase | c...    55   9e-09
AT2G46210.1 | Symbols:  | Fatty acid/sphingolipid desaturase | c...    54   3e-08
AT5G09680.2 | Symbols: RLF | reduced lateral root formation | ch...    52   8e-08
AT5G09680.1 | Symbols: RLF | reduced lateral root formation | ch...    52   8e-08

>AT5G53560.1 | Symbols: ATB5-A, B5 #2, ATCB5-E, CB5-E | cytochrome
          B5 isoform E | chr5:21759628-21760353 FORWARD
          LENGTH=134
          Length = 134

 Score =  125 bits (315), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 54/79 (68%), Positives = 71/79 (89%)

Query: 1  MASNSKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDFE 60
          M+S+ K+L+FE+V+ HN  KDCW+II+GKVYDVTPF+DDHPGGDE L+++T KDAT DFE
Sbjct: 1  MSSDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFE 60

Query: 61 DVGHSDSAIEMMEQYFVGE 79
          DVGHSD+A +MM++YF+GE
Sbjct: 61 DVGHSDTARDMMDKYFIGE 79


>AT2G32720.1 | Symbols: B5 #4, ATCB5-B, CB5-B | cytochrome B5
          isoform B | chr2:13877013-13878447 REVERSE LENGTH=134
          Length = 134

 Score =  115 bits (287), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 51/79 (64%), Positives = 64/79 (81%)

Query: 1  MASNSKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDFE 60
          M   +K+ T  +V+ HN   DCWI+INGKVY+VT FL+DHPGGD+ L+++T KDAT DFE
Sbjct: 1  MGDEAKIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFE 60

Query: 61 DVGHSDSAIEMMEQYFVGE 79
          DVGHS+SA EMMEQY+VGE
Sbjct: 61 DVGHSESAREMMEQYYVGE 79


>AT5G48810.1 | Symbols: ATB5-B, B5 #3, ATCB5-D, CB5-D | cytochrome
          B5 isoform D | chr5:19789249-19790180 REVERSE
          LENGTH=140
          Length = 140

 Score =  108 bits (271), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 47/79 (59%), Positives = 63/79 (79%)

Query: 1  MASNSKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDFE 60
          M  + K+ T  +V+ H+  KDCWI+I+GKVYDVT FLDDHPGGDE ++T+T KDAT DFE
Sbjct: 1  MGGDGKVFTLSEVSQHSSAKDCWIVIDGKVYDVTKFLDDHPGGDEVILTSTGKDATDDFE 60

Query: 61 DVGHSDSAIEMMEQYFVGE 79
          DVGHS +A  M+++Y+VG+
Sbjct: 61 DVGHSSTAKAMLDEYYVGD 79


>AT1G26340.1 | Symbols: B5 #6, ATCB5-A, CB5-A | cytochrome B5
          isoform A | chr1:9113992-9114755 FORWARD LENGTH=135
          Length = 135

 Score =  102 bits (255), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 60/79 (75%)

Query: 1  MASNSKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDFE 60
          M + +KL + E+ A HN + DCW++I+GKVYDV+ ++D+HPGGD+ L+    KDAT DFE
Sbjct: 1  MPTLTKLYSMEEAATHNKQDDCWVVIDGKVYDVSSYMDEHPGGDDVLLAVAGKDATDDFE 60

Query: 61 DVGHSDSAIEMMEQYFVGE 79
          D GHS  A E+ME+YF+GE
Sbjct: 61 DAGHSKDARELMEKYFIGE 79


>AT2G46650.1 | Symbols: B5 #1, ATCB5-C, CB5-C | cytochrome B5
          isoform C | chr2:19151807-19152394 FORWARD LENGTH=132
          Length = 132

 Score = 98.2 bits (243), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 58/75 (77%)

Query: 5  SKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDFEDVGH 64
          + L++F DVA H  K DCWI+I+GKVYD++ F+D+HPGGD  L+  T KDA+IDFEDV H
Sbjct: 2  ANLISFHDVAKHKCKNDCWILIHGKVYDISTFMDEHPGGDNVLLAVTGKDASIDFEDVNH 61

Query: 65 SDSAIEMMEQYFVGE 79
          S  A E+M++Y +G+
Sbjct: 62 SKDAKELMKKYCIGD 76


>AT1G37130.1 | Symbols: NIA2, B29, NIA2-1, CHL3, NR, NR2, ATNR2 |
           nitrate reductase 2 | chr1:14158617-14161652 FORWARD
           LENGTH=917
          Length = 917

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)

Query: 1   MASNSKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDFE 60
           M + +K+ +  +V  HN    CWII++G +YD T FL DHPGG ++++     D T +FE
Sbjct: 538 MNTTAKMYSMSEVKKHNSADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFE 597

Query: 61  DVGHSDSAIEMMEQYFVGE 79
            + HSD A +M+E Y +GE
Sbjct: 598 AI-HSDKAKKMLEDYRIGE 615


>AT1G77760.1 | Symbols: NIA1, GNR1, NR1 | nitrate reductase 1 |
           chr1:29236005-29239367 REVERSE LENGTH=917
          Length = 917

 Score = 71.6 bits (174), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)

Query: 1   MASNSKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDFE 60
           M + SK+ +  +V  HN     WII++G +YD T FL DHPGG ++++     D T +FE
Sbjct: 541 MNTASKMYSISEVRKHNTADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFE 600

Query: 61  DVGHSDSAIEMMEQYFVGE 79
            + HSD A +++E Y +GE
Sbjct: 601 AI-HSDKAKKLLEDYRIGE 618


>AT1G60660.1 | Symbols: B5 #5, ATCB5LP, CB5LP | cytochrome B5-like
           protein | chr1:22342589-22342954 REVERSE LENGTH=121
          Length = 121

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)

Query: 4   NSKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDFEDVG 63
             K  +  +VA+HN + DCWIII  KVYD+T ++++HPGGD A++     D+T  F    
Sbjct: 45  RPKSYSKSEVAVHNKRNDCWIIIKDKVYDITSYVEEHPGGD-AILDHAGDDSTDGFFGPQ 103

Query: 64  HSDSAIEMMEQYFVGE 79
           H+    +M+E +++GE
Sbjct: 104 HATRVFDMIEDFYIGE 119


>AT3G61580.1 | Symbols:  | Fatty acid/sphingolipid desaturase |
          chr3:22786253-22787602 FORWARD LENGTH=449
          Length = 449

 Score = 55.1 bits (131), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 3  SNSKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDFEDV 62
          +  K +T ED+  HN   D WI I GKVY+V+ ++  HPGGD  ++    +D T  F   
Sbjct: 5  TEKKYITNEDLKKHNKSGDLWIAIQGKVYNVSDWIKTHPGGDTVILNLVGQDVTDAFIAF 64

Query: 63 GHSDSAIEMMEQYFVG 78
           H  +A   ++  F G
Sbjct: 65 -HPGTAWHHLDHLFTG 79


>AT2G46210.1 | Symbols:  | Fatty acid/sphingolipid desaturase |
          chr2:18977542-18978891 FORWARD LENGTH=449
          Length = 449

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 34/57 (59%)

Query: 3  SNSKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDF 59
          +  + +T ED+  HN   D WI I GKVYDV+ ++  HPGG+ A++    +D T  F
Sbjct: 5  TKKRYVTSEDLKKHNKPGDLWISIQGKVYDVSDWVKSHPGGEAAILNLAGQDVTDAF 61


>AT5G09680.2 | Symbols: RLF | reduced lateral root formation |
           chr5:2999362-3000185 REVERSE LENGTH=211
          Length = 211

 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 36/57 (63%)

Query: 3   SNSKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDF 59
           SN +L+  ++V  H      W ++ G+VY+++P+++ HPGG + L+ A  +D T+ F
Sbjct: 124 SNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGGVDMLMKAVGRDGTLLF 180


>AT5G09680.1 | Symbols: RLF | reduced lateral root formation |
           chr5:2999362-3000185 REVERSE LENGTH=211
          Length = 211

 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 36/57 (63%)

Query: 3   SNSKLLTFEDVALHNHKKDCWIIINGKVYDVTPFLDDHPGGDEALITATEKDATIDF 59
           SN +L+  ++V  H      W ++ G+VY+++P+++ HPGG + L+ A  +D T+ F
Sbjct: 124 SNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGGVDMLMKAVGRDGTLLF 180