Miyakogusa Predicted Gene

Lj3g3v2479900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2479900.1 Non Chatacterized Hit- tr|A5BGU5|A5BGU5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34,1e-16,seg,NULL,CUFF.44082.1
         (205 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46640.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    72   2e-13
AT2G46640.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    67   6e-12
AT2G46640.1 | Symbols:  | unknown protein; Has 19 Blast hits to ...    48   5e-06

>AT2G46640.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 20 plant
           structures; EXPRESSED DURING: 11 growth stages; Has 26
           Blast hits to 26 proteins in 11 species: Archae - 0;
           Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23;
           Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
           | chr2:19148792-19150751 FORWARD LENGTH=281
          Length = 281

 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 11/124 (8%)

Query: 1   MKIFNWVHKRFHNNALKDGFASNIKKTE----PVMNKDSQALLKQVALTDLLGGWKDGIL 56
           M IFNWV K+ H N +KDG   N KK        + K+++A+L QV L D L  W DG+L
Sbjct: 1   MTIFNWVQKKLHQNVIKDGVRKNEKKKRNEGISEIEKNTKAILDQVGLVDALDNWFDGVL 60

Query: 57  TIGTLGYDPLKSINHNKEYFALEAEHNGQGEGDQVEHNDEENCYNAEHEENPLMHTTFEH 116
           TIGT G+D L    + KE   ++ +  G G+ D V   D     N + E +PL+  + E+
Sbjct: 61  TIGTFGFDTL----NFKEEDEMDDDECGSGDLDYVVI-DGSIIKNVDQESDPLI--SVEN 113

Query: 117 KFED 120
           KF D
Sbjct: 114 KFYD 117


>AT2G46640.3 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 20 plant
           structures; EXPRESSED DURING: 11 growth stages. |
           chr2:19148792-19150751 FORWARD LENGTH=283
          Length = 283

 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 13/126 (10%)

Query: 1   MKIFNWVHKRFHNNALK--DGFASNIKKTE----PVMNKDSQALLKQVALTDLLGGWKDG 54
           M IFNWV K+ H N +K  DG   N KK        + K+++A+L QV L D L  W DG
Sbjct: 1   MTIFNWVQKKLHQNVIKEIDGVRKNEKKKRNEGISEIEKNTKAILDQVGLVDALDNWFDG 60

Query: 55  ILTIGTLGYDPLKSINHNKEYFALEAEHNGQGEGDQVEHNDEENCYNAEHEENPLMHTTF 114
           +LTIGT G+D L    + KE   ++ +  G G+ D V   D     N + E +PL+  + 
Sbjct: 61  VLTIGTFGFDTL----NFKEEDEMDDDECGSGDLDYVVI-DGSIIKNVDQESDPLI--SV 113

Query: 115 EHKFED 120
           E+KF D
Sbjct: 114 ENKFYD 119


>AT2G46640.1 | Symbols:  | unknown protein; Has 19 Blast hits to 19
           proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa
           - 0; Fungi - 0; Plants - 17; Viruses - 0; Other
           Eukaryotes - 2 (source: NCBI BLink). |
           chr2:19149177-19150751 FORWARD LENGTH=269
          Length = 269

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 11/107 (10%)

Query: 18  DGFASNIKKTE----PVMNKDSQALLKQVALTDLLGGWKDGILTIGTLGYDPLKSINHNK 73
           DG   N KK        + K+++A+L QV L D L  W DG+LTIGT G+D L    + K
Sbjct: 6   DGVRKNEKKKRNEGISEIEKNTKAILDQVGLVDALDNWFDGVLTIGTFGFDTL----NFK 61

Query: 74  EYFALEAEHNGQGEGDQVEHNDEENCYNAEHEENPLMHTTFEHKFED 120
           E   ++ +  G G+ D V   D     N + E +PL+  + E+KF D
Sbjct: 62  EEDEMDDDECGSGDLDYVVI-DGSIIKNVDQESDPLI--SVENKFYD 105