Miyakogusa Predicted Gene
- Lj3g3v2478800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2478800.1 Non Chatacterized Hit- tr|F6H3H2|F6H3H2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,24.19,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptide repeat domain,Pentatricopept,CUFF.44079.1
(533 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 595 e-170
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 362 e-100
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 7e-96
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 3e-95
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 4e-95
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 9e-95
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 338 6e-93
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 3e-92
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 4e-92
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 4e-92
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 1e-91
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 332 5e-91
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 331 1e-90
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 328 5e-90
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 1e-89
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 327 1e-89
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 327 2e-89
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 326 2e-89
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 325 3e-89
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 3e-88
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 322 5e-88
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 5e-88
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 8e-88
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 9e-88
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 315 5e-86
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 313 2e-85
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 5e-85
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 5e-85
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 5e-85
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 310 2e-84
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 3e-84
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 309 3e-84
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 5e-84
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 305 5e-83
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 7e-83
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 303 3e-82
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 302 5e-82
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 3e-81
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 4e-81
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 298 4e-81
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 9e-81
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 2e-80
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 296 2e-80
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 295 5e-80
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 294 9e-80
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 1e-79
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 293 3e-79
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 6e-79
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 5e-78
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 285 7e-77
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 1e-76
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 283 2e-76
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 6e-76
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 6e-76
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 7e-76
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 281 7e-76
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 3e-75
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 3e-75
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 3e-75
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 5e-75
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 1e-74
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 6e-74
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 7e-74
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 271 1e-72
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 5e-72
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 6e-72
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 1e-71
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 266 4e-71
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 4e-71
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 262 5e-70
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 9e-70
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 261 1e-69
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 260 1e-69
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 259 4e-69
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 8e-69
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 2e-68
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 5e-68
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 5e-68
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 5e-68
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 255 6e-68
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 253 3e-67
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 6e-67
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 6e-67
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 8e-67
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 247 2e-65
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 246 2e-65
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 244 1e-64
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 7e-64
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 8e-63
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 8e-62
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 233 2e-61
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 3e-61
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 3e-61
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 9e-61
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 1e-59
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 7e-59
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 8e-57
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 8e-56
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 4e-54
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 5e-53
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 7e-51
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 5e-50
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 195 6e-50
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 3e-48
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 6e-48
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 6e-48
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 7e-45
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 9e-25
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 103 2e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 103 4e-22
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 99 6e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 8e-21
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 97 3e-20
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 93 4e-19
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 8e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 91 2e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 90 3e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 90 3e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 89 6e-18
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 9e-17
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 86 9e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 85 2e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 5e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 80 4e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 79 1e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 77 2e-14
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 76 6e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 72 1e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 71 2e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 71 2e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 70 3e-12
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 70 4e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 2e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 67 4e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 65 2e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 2e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 3e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 3e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 6e-08
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 54 2e-07
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 595 bits (1535), Expect = e-170, Method: Compositional matrix adjust.
Identities = 283/502 (56%), Positives = 367/502 (73%), Gaps = 2/502 (0%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
MN +KQ+H + LRTG+D+TK L+++LL IPNL YA+ + H NS FLYNKL+QAY
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
LY+ + G P+ + ++LH+ F +SGF D F
Sbjct: 61 HQPHES-IVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
T L+ YAK+G L ARR+FDEM R+VP WNAM+ G+ R GD+ A+ELF MP +NV
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
SWTT+ISG+S+N Y +AL +FL ME ++ + PN +T+ S+LPACANLG LEIG+R+E
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
YAR+NGFF N+YV NA +EMY+KCG IDVA R+F E+G+ RNLCSWNSMI LA HGK
Sbjct: 240 YARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
+AL L+ QMLREG PD VTFVGLLLAC HGGMV KG+ +FKSM+ I PKLEHYGCM
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
+DLLGR GKL+EAY++I+TMPMKPD+V+WGTLLGACSFHGNVE+AEIA+E+LF LEP NP
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNP 419
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHS-FLEEGGQLHKFIVEDRSHPKS 502
GN VI+SNIYA+ ++WDGV ++RK+MK +TK+AG+S F+E G +HKF VED+SHP+S
Sbjct: 420 GNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRS 479
Query: 503 NEIFALLDGVYEMFKFNRSAFE 524
EI+ +L+ ++ K +S F+
Sbjct: 480 YEIYQVLEEIFRRMKLEKSRFD 501
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/494 (38%), Positives = 300/494 (60%), Gaps = 10/494 (2%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQA 79
+ +KQ H Y + TG+++ + K +E +L YA +V H P +L+N +++A
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRA 87
Query: 80 YXXXXX--XXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGF 137
++Y ++ L P+ + G+ +H + GF
Sbjct: 88 LSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 138 APDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRL 197
V T L+ MY G L AR++FDEM V++V WNA++AG+ + G++D A L +
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 198 MPS--RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL 255
MP RN VSWT +ISGY+K+ + +A+ +F RM E++ P+ VTL ++L ACA+LG+L
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM-LMENVEPDEVTLLAVLSACADLGSL 266
Query: 256 EIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMG 315
E+G+R+ +Y G + + ++NAV++MYAK G+I A VF E + RN+ +W ++I G
Sbjct: 267 ELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF-ECVNERNVVTWTTIIAG 325
Query: 316 LAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIP 375
LA HG +AL ++++M++ G P+DVTF+ +L AC+H G V+ G+ +F SM++ + I P
Sbjct: 326 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 385
Query: 376 KLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESL 435
+EHYGCM+DLLGRAGKLREA EVI++MP K ++ IWG+LL A + H ++EL E A L
Sbjct: 386 NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSEL 445
Query: 436 FTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVE 495
LEP N GNY++L+N+Y++ +WD +R +MKG + K AG S +E +++KFI
Sbjct: 446 IKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISG 505
Query: 496 DRSHPKSNEIFALL 509
D +HP+ I +L
Sbjct: 506 DLTHPQVERIHEIL 519
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/564 (35%), Positives = 308/564 (54%), Gaps = 71/564 (12%)
Query: 20 KNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNL----HYAQAVLHHSPNSTVFLYNK 75
K +NQVKQ+H +R + + + KL+ +L + A V + V L N
Sbjct: 28 KCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNS 87
Query: 76 LLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKS 135
L++A+ F ++S+M+ G + + +M+H H K
Sbjct: 88 LIRAHAQNSQPYQAFF-VFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKL 146
Query: 136 GFAPDVFAATALLDMYA---------------------------------KVGTLELARR 162
G + D++ AL+D Y+ K G L ARR
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 163 LFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKA 222
LFDEMP R++ +WN M+ G+AR ++ A ELF MP RN VSW+TM+ GYSK E A
Sbjct: 207 LFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMA 266
Query: 223 LGLFLRME----------------CEEDIMP----------------NAVTLASILPACA 250
+F +M E+ ++ +A + SIL AC
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT 326
Query: 251 NLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWN 310
G L +G R+ + +++ N YV NA+L+MYAKCG++ A+ VFN+I ++L SWN
Sbjct: 327 ESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK-KDLVSWN 385
Query: 311 SMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTD 370
+M+ GL VHG +A+EL+ +M REG PD VTF+ +L +C H G++++G F SM+
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
Query: 371 FNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEI 430
++++P++EHYGC+VDLLGR G+L+EA +V+QTMPM+P+ VIWG LLGAC H V++A+
Sbjct: 446 YDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKE 505
Query: 431 AAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLH 490
++L L+P +PGNY +LSNIYA+A+ W+GVA +R MK + K +G S +E +H
Sbjct: 506 VLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIH 565
Query: 491 KFIVEDRSHPKSNEIFALLDGVYE 514
+F V D+SHPKS++I+ +L + E
Sbjct: 566 EFTVFDKSHPKSDQIYQMLGSLIE 589
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/504 (38%), Positives = 311/504 (61%), Gaps = 15/504 (2%)
Query: 22 IGMNQVKQIHGYTLRTGIDQTKTLIEKLLE------IPNLHYAQAVLHHSPNSTVFLYNK 75
I +NQ+KQIHG+ LR G+DQ+ ++ KL+ +P YA+ V+ FL+
Sbjct: 60 INLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTA 119
Query: 76 LLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAH-FIK 134
+++ Y ++Y MR +P + G+ HA F
Sbjct: 120 VIRGYAIEGKFDEA-IAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL 178
Query: 135 SGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALEL 194
GF V+ ++DMY K +++ AR++FDEMP R+V +W ++A +AR G+++ A EL
Sbjct: 179 RGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAEL 237
Query: 195 FRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGA 254
F +P++++V+WT M++G+++N + ++AL F RME + I + VT+A + ACA LGA
Sbjct: 238 FESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME-KSGIRADEVTVAGYISACAQLGA 296
Query: 255 LEIGQRVEAYARKNGFF--KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSM 312
+ R A+K+G+ ++ + +A+++MY+KCG+++ A VF + + +N+ +++SM
Sbjct: 297 SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNN-KNVFTYSSM 355
Query: 313 IMGLAVHGKCGKALELYDQMLREG-TTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDF 371
I+GLA HG+ +AL L+ M+ + P+ VTFVG L+AC+H G+V++GR +F SM F
Sbjct: 356 ILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTF 415
Query: 372 NIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIA 431
+ P +HY CMVDLLGR G+L+EA E+I+TM ++P +WG LLGAC H N E+AEIA
Sbjct: 416 GVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIA 475
Query: 432 AESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSF-LEEGGQLH 490
AE LF LEP GNY++LSN+YASA W GV ++RK++K + K+ S+ +++ GQ+H
Sbjct: 476 AEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMH 535
Query: 491 KFIVEDRSHPKSNEIFALLDGVYE 514
KF + +HP SN+I L+ + E
Sbjct: 536 KFFPGNLNHPMSNKIQDKLEELVE 559
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/537 (36%), Positives = 301/537 (56%), Gaps = 32/537 (5%)
Query: 5 GTTTFKFSTLRNPNS----------------KNIGMNQVKQIHGYTLRTGIDQTKTLIEK 48
GT +FS L P+S K+ +N +KQ+ + + +G+ + L K
Sbjct: 2 GTRVTQFSYLHAPSSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFK 61
Query: 49 LLE-----IPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS 103
LL + NL YA+ + LY +L AY S +S RL+ +
Sbjct: 62 LLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHAS--SAFSFFRLMVNR 119
Query: 104 ----PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAK-VGTLE 158
PN + ++H H KSGF V TALL YA V +
Sbjct: 120 SVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHIT 179
Query: 159 LARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQ 218
LAR+LFDEM R V +W AM++G+AR GD+ A+ LF MP R+V SW +++ ++N
Sbjct: 180 LARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGL 239
Query: 219 YEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSN 278
+ +A+ LF RM E I PN VT+ +L ACA G L++ + + A+A + +++VSN
Sbjct: 240 FLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSN 299
Query: 279 AVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLR---E 335
+++++Y KCG+++ A VF ++ S ++L +WNSMI A+HG+ +A+ ++++M++
Sbjct: 300 SLVDLYGKCGNLEEASSVF-KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIN 358
Query: 336 GTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLRE 395
PD +TF+GLL ACTHGG+V KGR F M F I P++EHYGC++DLLGRAG+ E
Sbjct: 359 DIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDE 418
Query: 396 AYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYAS 455
A EV+ TM MK D IWG+LL AC HG+++LAE+A ++L L P N G +++N+Y
Sbjct: 419 ALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGE 478
Query: 456 ADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGV 512
W+ + RK++K K G S +E ++H+F D+SHP++ EI+ +LD +
Sbjct: 479 MGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 292/490 (59%), Gaps = 8/490 (1%)
Query: 25 NQVKQIHGYTLRTGIDQTKTLIEKLLE----IPNLHYAQAVLHHSPNSTVFLYNKLLQAY 80
N+ K+I+ + G+ Q+ ++ K+++ I ++ YA + + N VFLYN +++AY
Sbjct: 24 NEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAY 83
Query: 81 XXXXXXXXXCFSLYSQM-RLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
+Y Q+ R P+++ G+ +H H K G
Sbjct: 84 THNSLYCD-VIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRF 142
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
V AL+DMY K L A ++FDEM R+V +WN++++G+AR G + A LF LM
Sbjct: 143 HVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLML 202
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
+ +VSWT MISGY+ Y +A+ F M+ I P+ ++L S+LP+CA LG+LE+G+
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA-GIEPDEISLISVLPSCAQLGSLELGK 261
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
+ YA + GF K V NA++EMY+KCG I A ++F ++ +++ SW++MI G A H
Sbjct: 262 WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEG-KDVISWSTMISGYAYH 320
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G A+E +++M R P+ +TF+GLL AC+H GM ++G F M+ D+ I PK+EH
Sbjct: 321 GNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEH 380
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
YGC++D+L RAGKL A E+ +TMPMKPDS IWG+LL +C GN+++A +A + L LE
Sbjct: 381 YGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELE 440
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSH 499
P + GNYV+L+NIYA +W+ V++LRK+++ + K+ G S +E + +F+ D S
Sbjct: 441 PEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSK 500
Query: 500 PKSNEIFALL 509
P EI +L
Sbjct: 501 PFWTEISIVL 510
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 348 bits (892), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 283/493 (57%), Gaps = 15/493 (3%)
Query: 25 NQVKQIHGYTLRTGIDQTKTLIEKLLEI---------PN--LHYAQAVLHHSPNSTVFLY 73
+ +K IHG+ LRT + + +LL + P L YA + N +F++
Sbjct: 26 SDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVF 85
Query: 74 NKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFI 133
N L++ + F Y+QM P+ G+ H+ +
Sbjct: 86 NLLIRCFSTGAEPSKA-FGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIV 144
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALE 193
+ GF DV+ +L+ MYA G + A R+F +M R+V +W +M+AG+ + G V+ A E
Sbjct: 145 RFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENARE 204
Query: 194 LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
+F MP RN+ +W+ MI+GY+KN +EKA+ LF M+ E ++ N + S++ +CA+LG
Sbjct: 205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK-REGVVANETVMVSVISSCAHLG 263
Query: 254 ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
ALE G+R Y K+ NL + A+++M+ +CG I+ A VF + +L SW+S+I
Sbjct: 264 ALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL-SWSSII 322
Query: 314 MGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNI 373
GLAVHG KA+ + QM+ G P DVTF +L AC+HGG+VEKG I+++MK D I
Sbjct: 323 KGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGI 382
Query: 374 IPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAE 433
P+LEHYGC+VD+LGRAGKL EA I M +KP++ I G LLGAC + N E+AE
Sbjct: 383 EPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGN 442
Query: 434 SLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFI 493
L ++P + G YV+LSNIYA A QWD + LR +MK + K G S +E G+++KF
Sbjct: 443 MLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFT 502
Query: 494 V-EDRSHPKSNEI 505
+ +D+ HP+ +I
Sbjct: 503 MGDDQKHPEMGKI 515
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 345 bits (886), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 185/515 (35%), Positives = 289/515 (56%), Gaps = 18/515 (3%)
Query: 9 FKFSTLRNPNSKNIGMNQVKQIHGYTLRT----GIDQTKTLIEKLLEIPNLHYAQAVLHH 64
+ F+++ + S MN+ Q+H ++ + L++ + N++ AQ V
Sbjct: 153 YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 65 SPNSTVFLYNKLLQAYXXX--XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXX 122
+ V +N L+ + F + + R+ P++
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRV---EPDEVTLASVISACASLSAI 269
Query: 123 XXGQMLHAHFIKSG-FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAG 181
GQ +H +K+ D+ + A +DMYAK ++ AR +FD MP+R V +M++G
Sbjct: 270 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 329
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+A A +F M RNVVSW +I+GY++N + E+AL LF ++ E + P +
Sbjct: 330 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK-RESVCPTHYS 388
Query: 242 LASILPACANLGALEIGQRVEAYARKNGF-FK-----NLYVSNAVLEMYAKCGHIDVAWR 295
A+IL ACA+L L +G + + K+GF F+ +++V N++++MY KCG ++ +
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 296 VFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
VF ++ R+ SWN+MI+G A +G +ALEL+ +ML G PD +T +G+L AC H G
Sbjct: 449 VFRKMME-RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAG 507
Query: 356 MVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTL 415
VE+GRH F SM DF + P +HY CMVDLLGRAG L EA +I+ MPM+PDSVIWG+L
Sbjct: 508 FVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 567
Query: 416 LGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQIT 475
L AC H N+ L + AE L +EP N G YV+LSN+YA +W+ V +RK M+ +T
Sbjct: 568 LAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVT 627
Query: 476 KSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
K G S+++ G H F+V+D+SHP+ +I +LLD
Sbjct: 628 KQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLD 662
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 168/279 (60%), Gaps = 2/279 (0%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
+HA IKSGF+ ++F L+D Y+K G+LE R++FD+MP R + TWN+++ G + G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
+D A LFR MP R+ +W +M+SG++++ + E+AL F M +E + N + AS+L
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH-KEGFVLNEYSFASVLS 160
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLC 307
AC+ L + G +V + K+ F ++Y+ +A+++MY+KCG+++ A RVF+E+G RN+
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD-RNVV 219
Query: 308 SWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM 367
SWNS+I +G +AL+++ ML PD+VT ++ AC ++ G+ + +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 368 KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK 406
+ + + VD+ + +++EA + +MP++
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 184/498 (36%), Positives = 295/498 (59%), Gaps = 45/498 (9%)
Query: 23 GMNQVKQIHGYTLRTGIDQT-----KTLIEKLLEIPN---LHYAQAVLHHSPNS-TVFLY 73
+ +++QIH +++R G+ + K LI L+ +P+ + YA V VF++
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIW 88
Query: 74 NKLLQAYXXXXXXXXXCFSLYSQMRLLGH-SPNQYXXXXXXXXXXXXXXXXXGQMLHAHF 132
N L++ Y FSLY +MR+ G P+ + G+ +H+
Sbjct: 89 NTLIRGYAEIGNSIS-AFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGAL 192
I+SGF ++ +LL +YA G DV A
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCG-------------------------------DVASAY 176
Query: 193 ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANL 252
++F MP +++V+W ++I+G+++N + E+AL L+ M + I P+ T+ S+L ACA +
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN-SKGIKPDGFTIVSLLSACAKI 235
Query: 253 GALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSM 312
GAL +G+RV Y K G +NL+ SN +L++YA+CG ++ A +F+E+ +N SW S+
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD-KNSVSWTSL 294
Query: 313 IMGLAVHGKCGKALELYDQM-LREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDF 371
I+GLAV+G +A+EL+ M EG P ++TFVG+L AC+H GMV++G F+ M+ ++
Sbjct: 295 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEY 354
Query: 372 NIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIA 431
I P++EH+GCMVDLL RAG++++AYE I++MPM+P+ VIW TLLGAC+ HG+ +LAE A
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFA 414
Query: 432 AESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHK 491
+ LEP + G+YV+LSN+YAS +W V K+RK M + K GHS +E G ++H+
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 474
Query: 492 FIVEDRSHPKSNEIFALL 509
F++ D+SHP+S+ I+A L
Sbjct: 475 FLMGDKSHPQSDAIYAKL 492
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 344 bits (883), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 175/471 (37%), Positives = 276/471 (58%), Gaps = 3/471 (0%)
Query: 55 LHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXX 114
++YA+ V + V +N +++ Y F L+ +M+ P++
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA-FKLFEEMKDSNVMPDEMILCNIVS 220
Query: 115 XXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPT 174
+ ++ I++ D TAL+ MYA G +++AR F +M VR +
Sbjct: 221 ACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFV 280
Query: 175 WNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEED 234
AM++G+++ G +D A +F +++V WTTMIS Y ++ ++AL +F M C
Sbjct: 281 STAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS-G 339
Query: 235 IMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAW 294
I P+ V++ S++ ACANLG L+ + V + NG L ++NA++ MYAKCG +D
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 295 RVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
VF ++ RN+ SW+SMI L++HG+ AL L+ +M +E P++VTFVG+L C+H
Sbjct: 400 DVFEKMPR-RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHS 458
Query: 355 GMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGT 414
G+VE+G+ IF SM ++NI PKLEHYGCMVDL GRA LREA EVI++MP+ + VIWG+
Sbjct: 459 GLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGS 518
Query: 415 LLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQI 474
L+ AC HG +EL + AA+ + LEP + G V++SNIYA +W+ V +R+VM+ +
Sbjct: 519 LMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNV 578
Query: 475 TKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFKFNRSAFEC 525
K G S +++ G+ H+F++ D+ H +SNEI+A LD V K +C
Sbjct: 579 FKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDC 629
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 187/412 (45%), Gaps = 22/412 (5%)
Query: 23 GMNQVKQIHGYTLRTGIDQTKT----LIEKLLEIPNLHYAQAVLHHSPNS-TVFLYNKLL 77
+N +KQ+H + LRT I+ + NL YA V P+ ++N L
Sbjct: 24 SLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFL 83
Query: 78 QAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGF 137
+ Y ++R +G +Q+ G LH K
Sbjct: 84 RDLSRSSEPRATIL-FYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 138 APDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFR- 196
D F T +DMYA G + AR +FDEM R+V TWN M+ + RFG VD A +LF
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 197 -----LMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACAN 251
+MP ++ G + N +Y +A+ FL E D+ + L +++ A
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL---IENDVRMDTHLLTALVTMYAG 259
Query: 252 LGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNS 311
G +++ + + RK +NL+VS A++ Y+KCG +D A +F++ ++L W +
Sbjct: 260 AGCMDMARE---FFRKMS-VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEK-KDLVCWTT 314
Query: 312 MIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDF 371
MI +AL ++++M G PD V+ ++ AC + G+++K + + + +
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN- 373
Query: 372 NIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ +L ++++ + G L +V + MP + + V W +++ A S HG
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRR-NVVSWSSMINALSMHG 424
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 338 bits (867), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 277/510 (54%), Gaps = 26/510 (5%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLLEI--------PNLHYAQAVLHHSPNSTVFLYNK 75
+ + QIH +++G + ++L +L YA + + P F +N
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 76 LLQAYXXXXXXXX--XCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFI 133
+++ + Y M PN++ G+ +H +
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLF------DEMPVR--------EVPTWNAMM 179
K GF D F + L+ MY G ++ AR LF +M V E+ WN M+
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 180 AGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNA 239
G+ R GD A LF M R+VVSW TMISGYS N ++ A+ +F M+ + DI PN
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK-KGDIRPNY 274
Query: 240 VTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE 299
VTL S+LPA + LG+LE+G+ + YA +G + + +A+++MY+KCG I+ A VF
Sbjct: 275 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 334
Query: 300 IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEK 359
+ N+ +W++MI G A+HG+ G A++ + +M + G P DV ++ LL AC+HGG+VE+
Sbjct: 335 LPR-ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393
Query: 360 GRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGAC 419
GR F M + + P++EHYGCMVDLLGR+G L EA E I MP+KPD VIW LLGAC
Sbjct: 394 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGAC 453
Query: 420 SFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAG 479
GNVE+ + A L + P + G YV LSN+YAS W V+++R MK I K G
Sbjct: 454 RMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPG 513
Query: 480 HSFLEEGGQLHKFIVEDRSHPKSNEIFALL 509
S ++ G LH+F+VED SHPK+ EI ++L
Sbjct: 514 CSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 182/487 (37%), Positives = 271/487 (55%), Gaps = 10/487 (2%)
Query: 26 QVKQIHGYTLRTGIDQTKTLIEKLLEI-------PNLHYAQAVLHHSPNSTVFLYNKLLQ 78
++KQIH L+TG+ Q I K L L YAQ V FL+N +++
Sbjct: 29 ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 79 AYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFA 138
+ LY +M N Y +HA K G+
Sbjct: 89 GFSCSDEPERSLL-LYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 139 PDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLM 198
DV+A +L++ YA G +LA LFD +P + +WN+++ G+ + G +D AL LFR M
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 199 PSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG 258
+N +SWTTMISGY + ++AL LF M+ D+ P+ V+LA+ L ACA LGALE G
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQ-NSDVEPDNVSLANALSACAQLGALEQG 266
Query: 259 QRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAV 318
+ + +Y K + + +++MYAKCG ++ A VF I +++ +W ++I G A
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK-KSVQAWTALISGYAY 325
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLE 378
HG +A+ + +M + G P+ +TF +L AC++ G+VE+G+ IF SM+ D+N+ P +E
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 379 HYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTL 438
HYGC+VDLLGRAG L EA IQ MP+KP++VIWG LL AC H N+EL E E L +
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445
Query: 439 EPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRS 498
+P + G YV +NI+A +WD A+ R++MK + K G S + G H+F+ DRS
Sbjct: 446 DPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRS 505
Query: 499 HPKSNEI 505
HP+ +I
Sbjct: 506 HPEIEKI 512
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 166/371 (44%), Positives = 234/371 (63%), Gaps = 2/371 (0%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
D+ ++ Y ++G + AR LFD+MP R+V +WN ++ G+A GD++ +F MP
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
RNV SW +I GY++N + + LG F RM E ++PN T+ +L ACA LGA + G+
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 260 RVEAYARKNGFFK-NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAV 318
V Y G+ K ++ V NA+++MY KCG I++A VF I R+L SWN+MI GLA
Sbjct: 209 WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR-RDLISWNTMINGLAA 267
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLE 378
HG +AL L+ +M G +PD VTFVG+L AC H G+VE G F SM TDF+I+P++E
Sbjct: 268 HGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIE 327
Query: 379 HYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTL 438
H GC+VDLL RAG L +A E I MP+K D+VIW TLLGA + V++ E+A E L L
Sbjct: 328 HCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKL 387
Query: 439 EPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRS 498
EPRNP N+V+LSNIY A ++D A+L+ M+ + K AG S++E L KF
Sbjct: 388 EPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEK 447
Query: 499 HPKSNEIFALL 509
HP++ E+ +L
Sbjct: 448 HPRTEELQRIL 458
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 165/366 (45%), Positives = 235/366 (64%), Gaps = 2/366 (0%)
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
A+L Y + +E+A+ LFD MP R V TWN M+ G+A+ G + A LF MP R+ V
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
SW MI+GYS++ +AL LF++ME E + N + +S L CA++ ALE+G+++
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRL-NRSSFSSALSTCADVVALELGKQLHGR 434
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
K G+ +V NA+L MY KCG I+ A +F E+ +++ SWN+MI G + HG
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG-KDIVSWNTMIAGYSRHGFGEV 493
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMV 384
AL ++ M REG PDD T V +L AC+H G+V+KGR F +M D+ ++P +HY CMV
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMV 553
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPG 444
DLLGRAG L +A+ +++ MP +PD+ IWGTLLGA HGN ELAE AA+ +F +EP N G
Sbjct: 554 DLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSG 613
Query: 445 NYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNE 504
YV+LSN+YAS+ +W V KLR M+ + K G+S++E + H F V D HP+ +E
Sbjct: 614 MYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDE 673
Query: 505 IFALLD 510
IFA L+
Sbjct: 674 IFAFLE 679
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 41/306 (13%)
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
++ Y + G ELAR+LFDEMP R++ +WN M+ G+ R ++ A ELF +MP R+V
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
SW TM+SGY++N + A +F RM + D+ NA+ A + + + R E +
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR-ENW 217
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
A L N +L + K I A + F+ + ++R++ SWN++I G A GK +
Sbjct: 218 A--------LVSWNCLLGGFVKKKKIVEARQFFDSM-NVRDVVSWNTIITGYAQSGKIDE 268
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM----------------- 367
A +L+D E D T+ ++ MVE+ R +F M
Sbjct: 269 ARQLFD----ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQ 324
Query: 368 -------KTDFNIIP--KLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
K F+++P + + M+ + GK+ EA + MP K D V W ++
Sbjct: 325 GERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Query: 419 CSFHGN 424
S G+
Sbjct: 384 YSQSGH 389
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 157/371 (42%), Gaps = 68/371 (18%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFR--- 196
DV + +L YA+ G ++ AR +FD MP + +WNA+++ + + ++ A LF+
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 197 ----------------------------LMPSRNVVSWTTMISGYSKNKQYEKALGLFLR 228
M R+VVSW T+I+GY+++ + ++A LF
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 229 MECEE--------------DIMPNAVTLASILPA------CANLGALEIGQRVEAYARKN 268
++ ++ A L +P A L G+R+E
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 269 GFF--KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKAL 326
+N+ N ++ YA+CG I A +F+++ R+ SW +MI G + G +AL
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK-RDPVSWAAMIAGYSQSGHSFEAL 394
Query: 327 ELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVD- 385
L+ QM REG + +F L C +E G+ + ++ GC V
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG------RLVKGGYETGCFVGN 448
Query: 386 ----LLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFT--LE 439
+ + G + EA ++ + M K D V W T++ S HG E+A ES+ L+
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLK 507
Query: 440 PRNPGNYVILS 450
P + +LS
Sbjct: 508 PDDATMVAVLS 518
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 55/270 (20%)
Query: 171 EVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRME 230
++ WN ++ + R G + AL +F+ MP + VS+ MISGY +N ++E A LF
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF---- 118
Query: 231 CEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHI 290
D MP ++L N +++ Y + ++
Sbjct: 119 ---DEMPE---------------------------------RDLVSWNVMIKGYVRNRNL 142
Query: 291 DVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA 350
A +F EI R++CSWN+M+ G A +G A ++D+M +DV++ LL A
Sbjct: 143 GKARELF-EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSA 197
Query: 351 CTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSV 410
+E+ +FKS + ++ ++ + C++ + K+ EA + +M ++ D V
Sbjct: 198 YVQNSKMEEACMLFKS-RENWALVS----WNCLLGGFVKKKKIVEARQFFDSMNVR-DVV 251
Query: 411 IWGTLLGACSFHGNVELAEIAAESLFTLEP 440
W T++ + G ++ A LF P
Sbjct: 252 SWNTIITGYAQSGKID----EARQLFDESP 277
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 21/231 (9%)
Query: 30 IHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXX 89
I GY I + K L +K+ + + +A + +S + F
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF-----------------E 392
Query: 90 CFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLD 149
L+ QM G N+ G+ LH +K G+ F ALL
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 150 MYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV----VS 205
MY K G++E A LF EM +++ +WN M+AG++R G + AL F M + +
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 206 WTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALE 256
++S S +K F M + +MPN+ A ++ G LE
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 333 bits (855), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 294/534 (55%), Gaps = 31/534 (5%)
Query: 3 LSGTTTFKFSTLRNPN------SKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNL- 55
LS T T +F L P K+ +++V QIH LR + L+ + NL
Sbjct: 16 LSTTATARFR-LPPPEKLAVLIDKSQSVDEVLQIHAAILRHNL-----LLHPRYPVLNLK 69
Query: 56 -----------HYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSP 104
++ A+ H + + +FL+ + F LY Q+ +P
Sbjct: 70 LHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLSSEINP 128
Query: 105 NQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLF 164
N++ G+++H H +K G D + AT L+D+YAK G + A+++F
Sbjct: 129 NEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVF 184
Query: 165 DEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALG 224
D MP R + + AM+ +A+ G+V+ A LF M R++VSW MI GY+++ AL
Sbjct: 185 DRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALM 244
Query: 225 LFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMY 284
LF ++ E P+ +T+ + L AC+ +GALE G+ + + + + N+ V +++MY
Sbjct: 245 LFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMY 304
Query: 285 AKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLR-EGTTPDDVT 343
+KCG ++ A VFN+ +++ +WN+MI G A+HG AL L+++M G P D+T
Sbjct: 305 SKCGSLEEAVLVFNDTPR-KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDIT 363
Query: 344 FVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
F+G L AC H G+V +G IF+SM ++ I PK+EHYGC+V LLGRAG+L+ AYE I+ M
Sbjct: 364 FIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNM 423
Query: 404 PMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVA 463
M DSV+W ++LG+C HG+ L + AE L L +N G YV+LSNIYAS ++GVA
Sbjct: 424 NMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVA 483
Query: 464 KLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
K+R +MK I K G S +E ++H+F DR H KS EI+ +L + E K
Sbjct: 484 KVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIK 537
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 332 bits (850), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 184/518 (35%), Positives = 288/518 (55%), Gaps = 15/518 (2%)
Query: 11 FSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSP 66
S LR+ KNI V IH +RT DQ ++ +L+ + ++ YA V +
Sbjct: 33 ISVLRS--CKNIA--HVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS 88
Query: 67 NSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQ 126
N V+LY ++ + SLY +M P+ Y +
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADG-VSLYHRMIHNSVLPDNYVITSVLKACDLKVC----R 143
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG 186
+HA +K GF ++++Y K G L A+++FDEMP R+ M+ ++ G
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
+ ALELF+ + ++ V WT MI G +NK+ KAL LF M+ E ++ N T +L
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME-NVSANEFTAVCVL 262
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
AC++LGALE+G+ V ++ + +V NA++ MY++CG I+ A RVF + +++
Sbjct: 263 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD-KDV 321
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
S+N+MI GLA+HG +A+ + M+ G P+ VT V LL AC+HGG+++ G +F S
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS 381
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE 426
MK FN+ P++EHYGC+VDLLGR G+L EAY I+ +P++PD ++ GTLL AC HGN+E
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 427 LAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEG 486
L E A+ LF E + G YV+LSN+YAS+ +W ++R+ M+ S I K G S +E
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVD 501
Query: 487 GQLHKFIVEDRSHPKSNEIFALLDGVYEMFKFNRSAFE 524
Q+H+F+V D +HP I+ L + + +F + +
Sbjct: 502 NQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKENQID 539
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 282/516 (54%), Gaps = 41/516 (7%)
Query: 35 LRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXC 90
++T ++Q L+ + + L A + + VF+YN L + +
Sbjct: 797 IKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRS- 855
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
LY +M SP+ Y G+ L AH K GF V T L+D
Sbjct: 856 LELYVRMLRDSVSPSSYTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDF 913
Query: 151 YAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVD--------------------- 189
Y+ G + AR++FDEMP R+ W M++ + R D+D
Sbjct: 914 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 973
Query: 190 ------GALE----LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNA 239
G LE LF MP ++++SWTTMI GYS+NK+Y +A+ +F +M EE I+P+
Sbjct: 974 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM-MEEGIIPDE 1032
Query: 240 VTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE 299
VT+++++ ACA+LG LEIG+ V Y +NGF ++Y+ +A+++MY+KCG ++ A VF
Sbjct: 1033 VTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFN 1092
Query: 300 IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEK 359
+ +NL WNS+I GLA HG +AL+++ +M E P+ VTFV + ACTH G+V++
Sbjct: 1093 LPK-KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDE 1151
Query: 360 GRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGAC 419
GR I++SM D++I+ +EHYG MV L +AG + EA E+I M +P++VIWG LL C
Sbjct: 1152 GRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGC 1211
Query: 420 SFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITK-SA 478
H N+ +AEIA L LEP N G Y +L ++YA ++W VA++R M+ I K
Sbjct: 1212 RIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICP 1271
Query: 479 GHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYE 514
G S + + H F D+SH S+E+ LLD +Y+
Sbjct: 1272 GTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYD 1307
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 329 bits (843), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 180/530 (33%), Positives = 280/530 (52%), Gaps = 45/530 (8%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLL-----EIPN-LHYAQAVLHHSPNSTVFLYNKLL 77
+ + QIHG ++ G+D KL+ I + L YA+ +L P F++N L+
Sbjct: 18 LRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLV 77
Query: 78 QAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGF 137
+ Y MR P+ + G +H +K G
Sbjct: 78 RGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGL 137
Query: 138 APDVFAATALLDMYAKVGTLELARRLFDEMP----------------------------- 168
+F T L+ MY G +E AR++FDEM
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 169 --VREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLF 226
VR +WN M+AG+ + G+++ A +F MP R+ VSW+TMI G + N + ++ L+
Sbjct: 198 MLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESF-LY 256
Query: 227 LRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAK 286
R + PN V+L +L AC+ G+ E G+ + + K G+ + V+NA+++MY++
Sbjct: 257 FRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSR 316
Query: 287 CGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVG 346
CG++ +A VF + R + SW SMI GLA+HG+ +A+ L+++M G TPD ++F+
Sbjct: 317 CGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFIS 376
Query: 347 LLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK 406
LL AC+H G++E+G F MK ++I P++EHYGCMVDL GR+GKL++AY+ I MP+
Sbjct: 377 LLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIP 436
Query: 407 PDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLR 466
P +++W TLLGACS HGN+ELAE + L L+P N G+ V+LSN YA+A +W VA +R
Sbjct: 437 PTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIR 496
Query: 467 KVMKGSQITKSAGHSFLEEGGQLHKFIVEDR-------SHPKSNEIFALL 509
K M +I K+ S +E G ++KF ++ +H K EI L
Sbjct: 497 KSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRL 546
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 192/521 (36%), Positives = 294/521 (56%), Gaps = 23/521 (4%)
Query: 2 VLSGTTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQT----KTLIEKLLEIPNLHY 57
+L + TF F + +K+ + +QIHG+ L+ G D +LI ++ L
Sbjct: 130 LLPNSYTFPF--VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLED 187
Query: 58 AQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXX 117
A V SP+ V Y L++ Y + + +L P +
Sbjct: 188 AHKVFDKSPHRDVVSYTALIKGYASRGY-------IENAQKLFDEIPVKDVVSWNAMISG 240
Query: 118 XXXXXXXGQMLH--AHFIKSGFAPDVFAATALLDMYAKVGTLELARRLF----DEMPVRE 171
+ L +K+ PD ++ A+ G++EL R++ D
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 172 VPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMEC 231
+ NA++ +++ G+++ A LF +P ++V+SW T+I GY+ Y++AL LF M
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM-L 359
Query: 232 EEDIMPNAVTLASILPACANLGALEIGQRVEAY--ARKNGFFKNLYVSNAVLEMYAKCGH 289
PN VT+ SILPACA+LGA++IG+ + Y R G + ++++MYAKCG
Sbjct: 360 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 290 IDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLL 349
I+ A +VFN I ++L SWN+MI G A+HG+ + +L+ +M + G PDD+TFVGLL
Sbjct: 420 IEAAHQVFNSILH-KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 350 ACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDS 409
AC+H GM++ GRHIF++M D+ + PKLEHYGCM+DLLG +G +EA E+I M M+PD
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 538
Query: 410 VIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVM 469
VIW +LL AC HGNVEL E AE+L +EP NPG+YV+LSNIYASA +W+ VAK R ++
Sbjct: 539 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 598
Query: 470 KGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
+ K G S +E +H+FI+ D+ HP++ EI+ +L+
Sbjct: 599 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLE 639
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 223/437 (51%), Gaps = 17/437 (3%)
Query: 3 LSGTTTFKFSTLRNPNSKNI-----GMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----- 52
L ++ + ++RN S ++ + ++ IH ++ G+ T + KL+E
Sbjct: 20 LPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSP 79
Query: 53 --PNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXX 110
L YA +V + ++N + + + LY M LG PN Y
Sbjct: 80 HFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSA-LKLYVCMISLGLLPNSYTFP 138
Query: 111 XXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR 170
GQ +H H +K G D++ T+L+ MY + G LE A ++FD+ P R
Sbjct: 139 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR 198
Query: 171 EVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRME 230
+V ++ A++ G+A G ++ A +LF +P ++VVSW MISGY++ Y++AL LF M
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM- 257
Query: 231 CEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHI 290
+ ++ P+ T+ +++ ACA G++E+G++V + +GF NL + NA++++Y+KCG +
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 291 DVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA 350
+ A +F + +++ SWN++I G +AL L+ +MLR G TP+DVT + +L A
Sbjct: 318 ETACGLFERL-PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 351 CTHGGMVEKGRHIFKSMKTDFNIIPKLEHY-GCMVDLLGRAGKLREAYEVIQTMPMKPDS 409
C H G ++ GR I + + ++D+ + G + A++V ++ K S
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 410 VIWGTLLGACSFHGNVE 426
W ++ + HG +
Sbjct: 437 S-WNAMIFGFAMHGRAD 452
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 265/443 (59%), Gaps = 8/443 (1%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
++ ++ LG P+Q G+++H + IK G D +A++DMY
Sbjct: 239 MFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYG 298
Query: 153 KVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR----NVVSWTT 208
K G + LF++ + E NA + G +R G VD ALE+F L + NVVSWT+
Sbjct: 299 KSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTS 358
Query: 209 MISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKN 268
+I+G ++N + +AL LF M+ + PN VT+ S+LPAC N+ AL G+ +A +
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 269 GFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALEL 328
N++V +A+++MYAKCG I+++ VFN + + +NL WNS++ G ++HGK + + +
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT-KNLVCWNSLMNGFSMHGKAKEVMSI 476
Query: 329 YDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLG 388
++ ++R PD ++F LL AC G+ ++G FK M ++ I P+LEHY CMV+LLG
Sbjct: 477 FESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLG 536
Query: 389 RAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVI 448
RAGKL+EAY++I+ MP +PDS +WG LL +C NV+LAEIAAE LF LEP NPG YV+
Sbjct: 537 RAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVL 596
Query: 449 LSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFAL 508
LSNIYA+ W V +R M+ + K+ G S+++ +++ + D+SHP+ ++I
Sbjct: 597 LSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEK 656
Query: 509 LDGVYEMFKFNRSAFECHLDLDL 531
+D + + + +S +LD L
Sbjct: 657 MDEISK--EMRKSGHRPNLDFAL 677
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 210/475 (44%), Gaps = 48/475 (10%)
Query: 26 QVKQIHGYTLRTGIDQTKTLIEKLLEIPN----LHYAQAVLHHSPNSTVFLYNKLLQAYX 81
+ Q H L++G + KL+ + + A VL P+ T++ ++ L+ A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 82 XXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV 141
++S+M G P+ + G+ +H SG D
Sbjct: 93 KAKLFTQS-IGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 142 FAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
F ++ MY + G + AR++FD M ++V T +A++ +AR G ++ + + M S
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 202 ----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
N+VSW ++SG++++ +++A+ +F ++ P+ VT++S+LP+ + L +
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH-HLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR------------- 304
G+ + Y K G K+ V +A+++MY K GH+ +FN+ +
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 305 ---------------------NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
N+ SW S+I G A +GK +ALEL+ +M G P+ VT
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 344 FVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
+L AC + + GR +++ + ++D+ + G++ + V M
Sbjct: 391 IPSMLPACGNIAALGHGRST-HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 404 PMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQ 458
P K + V W +L+ S HG + ESL + R +++ +++ ++ Q
Sbjct: 450 PTK-NLVCWNSLMNGFSMHGKAKEVMSIFESL--MRTRLKPDFISFTSLLSACGQ 501
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/491 (35%), Positives = 280/491 (57%), Gaps = 6/491 (1%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
++++ + +GI+ ++ L+++ + A+ + S + L N + Y
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
+++ M G P++ G+ H + +++GF
Sbjct: 316 GLTREA-LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
AL+DMY K + A R+FD M + V TWN+++AG+ G+VD A E F MP +N+
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
VSW T+ISG + +E+A+ +F M+ +E + + VT+ SI AC +LGAL++ + +
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
Y KNG ++ + +++M+++CG + A +FN + + R++ +W + I +A+ G
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTAAIGAMAMAGNAE 553
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
+A+EL+D M+ +G PD V FVG L AC+HGG+V++G+ IF SM + P+ HYGCM
Sbjct: 554 RAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCM 613
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
VDLLGRAG L EA ++I+ MPM+P+ VIW +LL AC GNVE+A AAE + L P
Sbjct: 614 VDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERT 673
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSN 503
G+YV+LSN+YASA +W+ +AK+R MK + K G S ++ G+ H+F D SHP+
Sbjct: 674 GSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMP 733
Query: 504 EIFALLDGVYE 514
I A+LD V +
Sbjct: 734 NIEAMLDEVSQ 744
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 211/463 (45%), Gaps = 81/463 (17%)
Query: 1 MVLSGTTTFKFSTLRN-------PNS-KNIG-MNQVKQIHGYTLRTGIDQTKTLIEKLLE 51
MVL+ TTT K S L P+S KN ++++K H + G+D + I KL+
Sbjct: 13 MVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVA 72
Query: 52 IP-------NLHYAQAVLHHSPN-STVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS 103
+L +A+ V +S + T F+YN L++ Y L+ +M G S
Sbjct: 73 RSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL-LFLRMMNSGIS 131
Query: 104 PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRL 163
P++Y G +H +K G+A D+F +L+ YA+ G L
Sbjct: 132 PDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL------ 185
Query: 164 FDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKAL 223
D A ++F M RNVVSWT+MI GY++ + A+
Sbjct: 186 -------------------------DSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 224 GLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEM 283
LF RM +E++ PN+VT+ ++ ACA L LE G++V A+ R +G N + +A+++M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 284 YAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
Y KC IDVA R+F+E G+ NL N+M G +AL +++ M+ G PD ++
Sbjct: 281 YMKCNAIDVAKRLFDEYGA-SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 344 FVGLLLACT-----------HGGMVEKGRHIFKSM--------------KTDFNIIPKLE 378
+ + +C+ HG ++ G + ++ T F I ++
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 379 H-----YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
+ + +V G++ A+E +TMP K + V W T++
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEK-NIVSWNTII 441
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/417 (39%), Positives = 253/417 (60%), Gaps = 3/417 (0%)
Query: 103 SPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARR 162
SP+++ G+ +H+H + +GF AL+ MY++ G +E ARR
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 163 LFDEMPVRE--VPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYE 220
L ++ ++ + + A++ G+ + GD++ A +F + R+VV+WT MI GY ++ Y
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 221 KALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAV 280
+A+ LF M PN+ TLA++L ++L +L G+++ A K+G ++ VSNA+
Sbjct: 396 EAINLFRSM-VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454
Query: 281 LEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPD 340
+ MYAK G+I A R F+ I R+ SW SMI+ LA HG +ALEL++ ML EG PD
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
Query: 341 DVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVI 400
+T+VG+ ACTH G+V +GR F MK IIP L HY CMVDL GRAG L+EA E I
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 401 QTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWD 460
+ MP++PD V WG+LL AC H N++L ++AAE L LEP N G Y L+N+Y++ +W+
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 461 GVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
AK+RK MK ++ K G S++E ++H F VED +HP+ NEI+ + +++ K
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 223/495 (45%), Gaps = 71/495 (14%)
Query: 3 LSGTTTFKFST--LRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPN-----L 55
LS +T + T L+ +K+ G + +H +++G+ + L+ L+ + + L
Sbjct: 7 LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYAL 66
Query: 56 HYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXC--FSLYSQ----------------- 96
H A+ + P T F +N +L AY C F Q
Sbjct: 67 H-ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 97 -----MRLLGH------SPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAAT 145
+R++G P Q+ G+ +H+ +K G +V +
Sbjct: 126 QYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN 185
Query: 146 ALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVS 205
+LL+MYAK G +A+ +FD M VR++ +WNAM+A H + G +D A+ F M R++V+
Sbjct: 186 SLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 206 WTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYA 265
W +MISG+++ +AL +F +M + + P+ TLAS+L ACANL L IG+++ ++
Sbjct: 246 WNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHI 305
Query: 266 RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL---------------------- 303
GF + V NA++ MY++CG ++ A R+ + G+
Sbjct: 306 VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQ 365
Query: 304 ----------RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTH 353
R++ +W +MI+G HG G+A+ L+ M+ G P+ T +L +
Sbjct: 366 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASS 425
Query: 354 GGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWG 413
+ G+ I S I + ++ + +AG + A + + D+V W
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWT 484
Query: 414 TLLGACSFHGNVELA 428
+++ A + HG+ E A
Sbjct: 485 SMIIALAQHGHAEEA 499
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/491 (35%), Positives = 280/491 (57%), Gaps = 6/491 (1%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
++++ + +GI+ ++ L+++ + A+ + S + L N + Y
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
+++ M G P++ G+ H + +++GF
Sbjct: 316 GLTREA-LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
AL+DMY K + A R+FD M + V TWN+++AG+ G+VD A E F MP +N+
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
VSW T+ISG + +E+A+ +F M+ +E + + VT+ SI AC +LGAL++ + +
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
Y KNG ++ + +++M+++CG + A +FN + + R++ +W + I +A+ G
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTAAIGAMAMAGNAE 553
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
+A+EL+D M+ +G PD V FVG L AC+HGG+V++G+ IF SM + P+ HYGCM
Sbjct: 554 RAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCM 613
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
VDLLGRAG L EA ++I+ MPM+P+ VIW +LL AC GNVE+A AAE + L P
Sbjct: 614 VDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERT 673
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSN 503
G+YV+LSN+YASA +W+ +AK+R MK + K G S ++ G+ H+F D SHP+
Sbjct: 674 GSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMP 733
Query: 504 EIFALLDGVYE 514
I A+LD V +
Sbjct: 734 NIEAMLDEVSQ 744
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 211/463 (45%), Gaps = 81/463 (17%)
Query: 1 MVLSGTTTFKFSTLRN-------PNS-KNIG-MNQVKQIHGYTLRTGIDQTKTLIEKLLE 51
MVL+ TTT K S L P+S KN ++++K H + G+D + I KL+
Sbjct: 13 MVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVA 72
Query: 52 IP-------NLHYAQAVLHHSPN-STVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS 103
+L +A+ V +S + T F+YN L++ Y L+ +M G S
Sbjct: 73 RSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL-LFLRMMNSGIS 131
Query: 104 PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRL 163
P++Y G +H +K G+A D+F +L+ YA+ G L
Sbjct: 132 PDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL------ 185
Query: 164 FDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKAL 223
D A ++F M RNVVSWT+MI GY++ + A+
Sbjct: 186 -------------------------DSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 224 GLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEM 283
LF RM +E++ PN+VT+ ++ ACA L LE G++V A+ R +G N + +A+++M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 284 YAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
Y KC IDVA R+F+E G+ NL N+M G +AL +++ M+ G PD ++
Sbjct: 281 YMKCNAIDVAKRLFDEYGA-SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 344 FVGLLLACT-----------HGGMVEKGRHIFKSM--------------KTDFNIIPKLE 378
+ + +C+ HG ++ G + ++ T F I ++
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 379 H-----YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
+ + +V G++ A+E +TMP K + V W T++
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEK-NIVSWNTII 441
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 149/376 (39%), Positives = 245/376 (65%), Gaps = 1/376 (0%)
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
A A+LDMY K G++E A+RLFD M ++ TW M+ G+A D + A E+ MP +++
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
V+W +IS Y +N + +AL +F ++ ++++ N +TL S L ACA +GALE+G+ + +
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
Y +K+G N +V++A++ MY+KCG ++ + VFN + R++ W++MI GLA+HG
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK-RDVFVWSAMIGGLAMHGCGN 448
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
+A++++ +M P+ VTF + AC+H G+V++ +F M++++ I+P+ +HY C+
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
VD+LGR+G L +A + I+ MP+ P + +WG LLGAC H N+ LAE+A L LEPRN
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 568
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSN 503
G +V+LSNIYA +W+ V++LRK M+ + + K G S +E G +H+F+ D +HP S
Sbjct: 569 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 628
Query: 504 EIFALLDGVYEMFKFN 519
+++ L V E K N
Sbjct: 629 KVYGKLHEVMEKLKSN 644
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 207/480 (43%), Gaps = 91/480 (18%)
Query: 22 IGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIP------NLHYAQAVLHHSPNSTVFLYNK 75
+ + Q+KQ HG+ +RTG KL + +L YA+ V P F +N
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 76 LLQAYXXXXXXXXXCFSLYSQMRLLGHS---PNQYXXXXXXXXXXXXXXXXXGQMLHAHF 132
L++AY S+++ + ++ S PN+Y GQ LH
Sbjct: 101 LIRAYASGPDPV---LSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMA 157
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGAL 192
+KS DVF A +L+ Y G L+ A ++F + ++V +WN+M+ G + G D AL
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 193 ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANL 252
ELF+ M S ED+ + VT+ +L ACA +
Sbjct: 218 ELFKKMES--------------------------------EDVKASHVTMVGVLSACAKI 245
Query: 253 GALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN------- 305
LE G++V +Y +N NL ++NA+L+MY KCG I+ A R+F+ + N
Sbjct: 246 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 305
Query: 306 -----------------------LCSWNSMIMGLAVHGKCGKALELYDQM-LREGTTPDD 341
+ +WN++I +GK +AL ++ ++ L++ +
Sbjct: 306 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 365
Query: 342 VTFVGLLLACTHGGMVEKGRHIFKSMKT-----DFNIIPKLEHYGCMVDLLGRAGKLREA 396
+T V L AC G +E GR I +K +F++ L H + + G L ++
Sbjct: 366 ITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIH------MYSKCGDLEKS 419
Query: 397 YEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRN-PGNYVILSNIYAS 455
EV ++ K D +W ++G + HG A + + ++ N N V +N++ +
Sbjct: 420 REVFNSVE-KRDVFVWSAMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 166/383 (43%), Gaps = 59/383 (15%)
Query: 129 HAHFIKSGFAPDVFAATALLDMYA--KVGTLELARRLFDEMPVREVPTWNAMMAGHARFG 186
H H I++G D ++A+ L M A +LE AR++FDE+
Sbjct: 50 HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI------------------- 90
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
P N +W T+I Y+ ++ FL M E PN T ++
Sbjct: 91 ------------PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
A A + +L +GQ + A K+ +++V+N+++ Y CG +D A +VF I +++
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE-KDV 197
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
SWNSMI G G KALEL+ +M E VT VG+L AC +E GR +
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE 426
++ + + L M+D+ + G + +A + M K D+V W T+L + + E
Sbjct: 258 IEEN-RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK-DNVTWTTMLDGYAISEDYE 315
Query: 427 LAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVA----------KLRKVMKGSQIT- 475
A S+ P ++ N SA + +G +L+K MK +QIT
Sbjct: 316 AAREVLNSM-------PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITL 368
Query: 476 -----KSAGHSFLEEGGQLHKFI 493
A LE G +H +I
Sbjct: 369 VSTLSACAQVGALELGRWIHSYI 391
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 275/506 (54%), Gaps = 6/506 (1%)
Query: 19 SKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPN----LHYAQAVLHHSPNSTVFLYN 74
++N + K +H + ++ GI Q L L+ + +A V P+ +
Sbjct: 14 ARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWA 73
Query: 75 KLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIK 134
+L A S G P+ + G+ +H HFI
Sbjct: 74 SVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIV 133
Query: 135 SGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALEL 194
S +A D ++L+DMYAK G L A+ +FD + V+ +W AM++G+A+ G + ALEL
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALEL 193
Query: 195 FRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGA 254
FR++P +N+ SWT +ISG+ ++ + +A +F M E + + + L+SI+ ACANL A
Sbjct: 194 FRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAA 253
Query: 255 LEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIM 314
G++V GF +++SNA+++MYAKC + A +F+ + R++ SW S+I+
Sbjct: 254 SIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRH-RDVVSWTSLIV 312
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
G+A HG+ KAL LYD M+ G P++VTFVGL+ AC+H G VEKGR +F+SM D+ I
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA-EIAAE 433
P L+HY C++DLLGR+G L EA +I TMP PD W LL AC G ++ IA
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 434 SLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFI 493
+ + + ++P Y++LSNIYASA W V++ R+ + ++ K GHS +E + F
Sbjct: 433 LVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFY 492
Query: 494 VEDRSHPKSNEIFALLDGVYEMFKFN 519
+ SHP +IF LL + E +
Sbjct: 493 AGETSHPLKEDIFRLLKKLEEEMRIR 518
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
L CA L + + A+ K G + ++N ++ +Y KCG A +VF+E+ R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH-RD 68
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQMLREGT-TPDDVTFVGLLLACTHGGMVEKGR--- 361
+W S++ L GK L ++ + PDD F L+ AC + G ++ GR
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 362 -HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACS 420
H S + ++ +VD+ + G L A V ++ +K +++ W ++ +
Sbjct: 129 CHFIVSEYANDEVVK-----SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYA 182
Query: 421 FHGNVELA 428
G E A
Sbjct: 183 KSGRKEEA 190
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 264/510 (51%), Gaps = 40/510 (7%)
Query: 45 LIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSP 104
L+ + ++ A+ V P V + N ++++Y ++ M P
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEG-VKVFGTMCGCNVRP 138
Query: 105 NQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLF 164
+ Y G+ +H K G + +F L+ MY K G L AR +
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 165 DEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPS------------------------ 200
DEM R+V +WN+++ G+A+ D ALE+ R M S
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 201 -------------RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
+++VSW MI Y KN +A+ L+ RME + P+AV++ S+LP
Sbjct: 259 VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLP 317
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLC 307
AC + AL +G+++ Y + NL + NA+++MYAKCG ++ A VF + S R++
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS-RDVV 376
Query: 308 SWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM 367
SW +MI G+ A+ L+ ++ G PD + FV L AC+H G++E+GR FK M
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Query: 368 KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVEL 427
+ I P+LEH CMVDLLGRAGK++EAY IQ M M+P+ +WG LLGAC H + ++
Sbjct: 437 TDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDI 496
Query: 428 AEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGG 487
+AA+ LF L P G YV+LSNIYA A +W+ V +R +MK + K+ G S +E
Sbjct: 497 GLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 556
Query: 488 QLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
+H F+V DRSHP+S+EI+ LD + + K
Sbjct: 557 IIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 180/498 (36%), Positives = 277/498 (55%), Gaps = 42/498 (8%)
Query: 29 QIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
++H + L G DQ L KL+ ++ ++ YA+ V + T++++N L +A
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRA-LTLA 156
Query: 85 XXXXXCFSLYSQMRLLGHSPNQ----YXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPD 140
LY +M +G ++ Y G+ +HAH + G++
Sbjct: 157 GHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 141 VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPS 200
V+ T L+DMYA RFG VD A +F MP
Sbjct: 217 VYIMTTLVDMYA-------------------------------RFGCVDYASYVFGGMPV 245
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRMECE-EDIMPNAVTLASILPACANLGALEIGQ 259
RNVVSW+ MI+ Y+KN + +AL F M E +D PN+VT+ S+L ACA+L ALE G+
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
+ Y + G L V +A++ MY +CG ++V RVF+ + R++ SWNS+I VH
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD-RDVVSWNSLISSYGVH 364
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G KA++++++ML G +P VTFV +L AC+H G+VE+G+ +F++M D I P++EH
Sbjct: 365 GYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEH 424
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
Y CMVDLLGRA +L EA +++Q M +P +WG+LLG+C HGNVELAE A+ LF LE
Sbjct: 425 YACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALE 484
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSH 499
P+N GNYV+L++IYA A WD V +++K+++ + K G ++E +++ F+ D +
Sbjct: 485 PKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN 544
Query: 500 PKSNEIFALLDGVYEMFK 517
P +I A L + E K
Sbjct: 545 PLMEQIHAFLVKLAEDMK 562
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 13/258 (5%)
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
+S +I K + ++A+ + ++ P+ T ++ C + +L RV
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVL-----SQESSPSQQTYELLILCCGHRSSLSDALRVHR 101
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
+ NG ++ +++ ++ MY+ G +D A +VF++ R + WN++ L + G
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRK-RTIYVWNALFRALTLAGHGE 160
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHG----GMVEKGRHIFKSMKTDFNIIPKLEH 379
+ L LY +M R G D T+ +L AC + KG+ I + T +
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHL-TRRGYSSHVYI 219
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNV-ELAEIAAESLFTL 438
+VD+ R G + A V MP++ + V W ++ + +G E E +
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 439 EPRNPGNYVILSNIYASA 456
+ +P + ++S + A A
Sbjct: 279 KDSSPNSVTMVSVLQACA 296
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 322 bits (824), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 187/525 (35%), Positives = 286/525 (54%), Gaps = 52/525 (9%)
Query: 7 TTFKFSTLRNP----NSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKL-----LEIPN-LH 56
T + + R P N KNI +KQIH + G+ +++ +L L +P L
Sbjct: 6 TNDRTTNRRRPKLWQNCKNI--RTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALK 63
Query: 57 YAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXX 116
YA + P V + N +L+ SLY++M G SP++Y
Sbjct: 64 YAHKLFDEIPKPDVSICNHVLRG-SAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKAC 122
Query: 117 XXXXXXXXGQMLHAHFIKSGFAPDVFAATALL-------DM------------------- 150
G H ++ GF + + AL+ D+
Sbjct: 123 SKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWS 182
Query: 151 -----YAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVS 205
YAK G ++ A RLFDEMP ++ WN M+ G + ++D A ELF ++VV+
Sbjct: 183 SMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVT 242
Query: 206 WTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYA 265
W MISGY ++ALG+F M + P+ VT+ S+L ACA LG LE G+R+ Y
Sbjct: 243 WNAMISGYVNCGYPKEALGIFKEMR-DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 266 RKNGFFKN-LYVS----NAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
+ + +YV NA+++MYAKCG ID A VF + R+L +WN++I+GLA+H
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD-RDLSTWNTLIVGLALHH 360
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
G ++E++++M R P++VTF+G++LAC+H G V++GR F M+ +NI P ++HY
Sbjct: 361 AEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHY 419
Query: 381 GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEP 440
GCMVD+LGRAG+L EA+ +++M ++P++++W TLLGAC +GNVEL + A E L ++
Sbjct: 420 GCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRK 479
Query: 441 RNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEE 485
G+YV+LSNIYAS QWDGV K+RK+ +++ K G S +EE
Sbjct: 480 DESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEE 524
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 321 bits (822), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 268/454 (59%), Gaps = 7/454 (1%)
Query: 71 FLYNKLLQA--YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQML 128
FL+N +++A + S+Y +MR SP+ + GQ
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 129 HAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDV 188
HA + G D F T+LL+MY+ G L A+R+FD+ +++P WN+++ +A+ G +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 189 DGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMEC----EEDIMPNAVTLAS 244
D A +LF MP RNV+SW+ +I+GY +Y++AL LF M+ E + PN T+++
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L AC LGALE G+ V AY K ++ + A+++MYAKCG ++ A RVFN +GS +
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQML-REGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
++ ++++MI LA++G + +L+ +M + P+ VTFVG+L AC H G++ +G+
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
FK M +F I P ++HYGCMVDL GR+G ++EA I +MPM+PD +IWG+LL G
Sbjct: 325 FKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Query: 424 NVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
+++ E A + L L+P N G YV+LSN+YA +W V +R M+ I K G S++
Sbjct: 385 DIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYV 444
Query: 484 EEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
E G +H+F+V D S +S I+A+LD + + +
Sbjct: 445 EVEGVVHEFVVGDESQQESERIYAMLDEIMQRLR 478
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 321 bits (822), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 158/386 (40%), Positives = 248/386 (64%), Gaps = 34/386 (8%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H+ I+SGF ++ +LL +YA G
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCG----------------------------- 37
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
DV A ++F MP +++V+W ++I+G+++N + E+AL L+ M + I P+ T+ S
Sbjct: 38 --DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN-SKGIKPDGFTIVS 94
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L ACA +GAL +G+RV Y K G +NL+ SN +L++YA+CG ++ A +F+E+ +
Sbjct: 95 LLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD-K 153
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLR-EGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
N SW S+I+GLAV+G +A+EL+ M EG P ++TFVG+L AC+H GMV++G
Sbjct: 154 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEY 213
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
F+ M+ ++ I P++EH+GCMVDLL RAG++++AYE I++MPM+P+ VIW TLLGAC+ HG
Sbjct: 214 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Query: 424 NVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
+ +LAE A + LEP + G+YV+LSN+YAS +W V K+RK M + K GHS +
Sbjct: 274 DSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV 333
Query: 484 EEGGQLHKFIVEDRSHPKSNEIFALL 509
E G ++H+F++ D+SHP+S+ I+A L
Sbjct: 334 EVGNRVHEFLMGDKSHPQSDAIYAKL 359
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
Query: 252 LGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNS 311
+ + +G+ + + ++GF +YV N++L +YA CG + A++VF+++ ++L +WNS
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVAWNS 59
Query: 312 MIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDF 371
+I G A +GK +AL LY +M +G PD T V LL AC G + G+ + M
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKV 118
Query: 372 NIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ L ++DL R G++ EA + M K +SV W +L+ + +G
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNG 169
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 41/300 (13%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
+ IH +R+G + LL + ++ A V P + +N ++ +
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
+LY++M G P+ + G+ +H + IK G ++ +
Sbjct: 68 GKPEEA-LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
+ LLD+YA+ G +E A+ LFDEM + +W +++ G A
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA-------------------- 166
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
++G+ K +A+ LF ME E ++P +T IL AC++ G ++ G E
Sbjct: 167 ------VNGFGK-----EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG--FEY 213
Query: 264 YARKNGFFK---NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
+ R +K + ++++ A+ G + A+ + N+ W +++ VHG
Sbjct: 214 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 258/456 (56%), Gaps = 3/456 (0%)
Query: 54 NLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXX 113
++ A+ V SP + +N L+ Y + +Y M G P+
Sbjct: 206 DMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIY-VYKLMESEGVKPDDVTMIGLV 264
Query: 114 XXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP 173
G+ + + ++G + AL+DM++K G + ARR+FD + R +
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 174 TWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEE 233
+W M++G+AR G +D + +LF M ++VV W MI G + K+ + AL LF M+
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ-TS 383
Query: 234 DIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVA 293
+ P+ +T+ L AC+ LGAL++G + Y K N+ + ++++MYAKCG+I A
Sbjct: 384 NTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEA 443
Query: 294 WRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTH 353
VF+ I + RN ++ ++I GLA+HG A+ +++M+ G PD++TF+GLL AC H
Sbjct: 444 LSVFHGIQT-RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCH 502
Query: 354 GGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWG 413
GGM++ GR F MK+ FN+ P+L+HY MVDLLGRAG L EA ++++MPM+ D+ +WG
Sbjct: 503 GGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWG 562
Query: 414 TLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQ 473
LL C HGNVEL E AA+ L L+P + G YV+L +Y A+ W+ + R++M
Sbjct: 563 ALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERG 622
Query: 474 ITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALL 509
+ K G S +E G + +FIV D+S P+S +I+ L
Sbjct: 623 VEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 175/408 (42%), Gaps = 70/408 (17%)
Query: 55 LHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLG---HSPNQYXXXX 111
L Y+ +L N +F +N ++ + F LY QM G P+ +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKES-FLLYKQMLRHGCCESRPDHFTYPV 161
Query: 112 XXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVRE 171
G M+ H +K A + M+A G +E AR++FDE PVR+
Sbjct: 162 LFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRD 221
Query: 172 VPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMEC 231
+ +WN ++ G+ + G+ + A+ +++LM S
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLMES------------------------------- 250
Query: 232 EEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHID 291
E + P+ VT+ ++ +C+ LG L G+ Y ++NG + + NA+++M++KCG I
Sbjct: 251 -EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIH 309
Query: 292 VAWRVFNEIGSLRNLCSWNSMIMGLA------------------------------VHGK 321
A R+F+ + R + SW +MI G A V K
Sbjct: 310 EARRIFDNLEK-RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAK 368
Query: 322 CGK-ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
G+ AL L+ +M T PD++T + L AC+ G ++ G I + ++ +++ +
Sbjct: 369 RGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALG 427
Query: 381 GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+VD+ + G + EA V + + +S+ + ++G + HG+ A
Sbjct: 428 TSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTA 474
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/515 (36%), Positives = 279/515 (54%), Gaps = 15/515 (2%)
Query: 3 LSGTTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI-----PNLHY 57
LSG T LR +++ M ++KQIH ++TG+ ++L +++Y
Sbjct: 22 LSGNTY-----LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNY 76
Query: 58 AQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS--PNQYXXXXXXXX 115
A V + F++N +++ + S++ M S P +
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMA-ISIFIDMLCSSPSVKPQRLTYPSVFKA 135
Query: 116 XXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTW 175
G+ LH IK G D F +L MY G L A R+F M +V W
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
N+M+ G A+ G +D A LF MP RN VSW +MISG+ +N +++ AL +F M+ E+D+
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ-EKDV 254
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWR 295
P+ T+ S+L ACA LGA E G+ + Y +N F N V A+++MY KCG I+
Sbjct: 255 KPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLN 314
Query: 296 VFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
VF E + L WNSMI+GLA +G +A++L+ ++ R G PD V+F+G+L AC H G
Sbjct: 315 VF-ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
Query: 356 MVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTL 415
V + F+ MK + I P ++HY MV++LG AG L EA +I+ MP++ D+VIW +L
Sbjct: 374 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSL 433
Query: 416 LGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQIT 475
L AC GNVE+A+ AA+ L L+P YV+LSN YAS ++ + R +MK Q+
Sbjct: 434 LSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQME 493
Query: 476 KSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
K G S +E ++H+FI +HPKS EI++LLD
Sbjct: 494 KEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLD 528
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/505 (34%), Positives = 276/505 (54%), Gaps = 11/505 (2%)
Query: 22 IGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI------PNLHYAQAVLHHSPNSTVFLYNK 75
I +V+QIH G + L+ ++ L YA +L S T+F N
Sbjct: 17 ITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNS 76
Query: 76 LLQAYXXXXXXXXXCFSLYSQMRLLGHS--PNQYXXXXXXXXXXXXXXXXXGQMLHAHFI 133
+++A+ F Y ++ G+ P+ Y G +H I
Sbjct: 77 MIRAHCKSPVPEKS-FDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTI 135
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALE 193
+ GF D T L+ +YA++G L+ ++F+ +P + AM+ AR GDV A +
Sbjct: 136 RRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARK 195
Query: 194 LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
LF MP R+ ++W MISGY++ + +AL +F M+ E + N V + S+L AC LG
Sbjct: 196 LFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE-GVKVNGVAMISVLSACTQLG 254
Query: 254 ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
AL+ G+ +Y +N + ++ ++++YAKCG ++ A VF + +N+ +W+S +
Sbjct: 255 ALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE-KNVYTWSSAL 313
Query: 314 MGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNI 373
GLA++G K LEL+ M ++G TP+ VTFV +L C+ G V++G+ F SM+ +F I
Sbjct: 314 NGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGI 373
Query: 374 IPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAE 433
P+LEHYGC+VDL RAG+L +A +IQ MPMKP + +W +LL A + N+EL +A++
Sbjct: 374 EPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASK 433
Query: 434 SLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFI 493
+ LE N G YV+LSNIYA ++ WD V+ +R+ MK + K G S +E G++H+F
Sbjct: 434 KMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFF 493
Query: 494 VEDRSHPKSNEIFALLDGVYEMFKF 518
V D+SHPK +I A+ + +
Sbjct: 494 VGDKSHPKYTQIDAVWKDISRRLRL 518
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 178/517 (34%), Positives = 278/517 (53%), Gaps = 14/517 (2%)
Query: 1 MVLSGTTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIP------N 54
M+ S ++ S LR+ M+++ +IH + G+ + + + + L +
Sbjct: 1 MLKSSSSLVAKSILRHQCK---SMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGD 57
Query: 55 LHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXX 114
+ YA L + + +N +++ + S+Y QM G P+
Sbjct: 58 VDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKS-ISVYIQMLRFGLLPDHMTYPFLMK 116
Query: 115 XXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPT 174
G LH +KSG D+F L+ MY AR+LFDEMP + + T
Sbjct: 117 SSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVT 176
Query: 175 WNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEED 234
WN+++ +A+ GDV A +F M R+VV+W++MI GY K +Y KAL +F +M
Sbjct: 177 WNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGS 236
Query: 235 IMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAW 294
N VT+ S++ ACA+LGAL G+ V Y + + ++++MYAKCG I AW
Sbjct: 237 SKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAW 296
Query: 295 RVFNEIGSLR--NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
VF S++ + WN++I GLA HG ++L+L+ +M PD++TF+ LL AC+
Sbjct: 297 SVFYR-ASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIW 412
HGG+V++ H FKS+K + PK EHY CMVD+L RAG +++A++ I MP+KP +
Sbjct: 356 HGGLVKEAWHFFKSLK-ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSML 414
Query: 413 GTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGS 472
G LL C HGN+ELAE + L L+P N G YV L+N+YA Q+ +R+ M+
Sbjct: 415 GALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKK 474
Query: 473 QITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALL 509
+ K AGHS L+ G H+FI D++H S++I+A+L
Sbjct: 475 GVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 273/487 (56%), Gaps = 7/487 (1%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEIPNL----HYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
K++H + ++ G+ + L+++ +L A+ V VF +N ++ Y
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM 214
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
L +M SP + +H + + P +
Sbjct: 215 KEYEES-IELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRL 273
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
AL++ YA G +++A R+F M R+V +W +++ G+ G++ A F MP R+
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR 333
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
+SWT MI GY + + ++L +F M+ ++P+ T+ S+L ACA+LG+LEIG+ ++
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREMQ-SAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
Y KN ++ V NA+++MY KCG + A +VF+++ R+ +W +M++GLA +G+
Sbjct: 393 YIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ-RDKFTWTAMVVGLANNGQGQ 451
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
+A++++ QM PDD+T++G+L AC H GMV++ R F M++D I P L HYGCM
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
VD+LGRAG ++EAYE+++ MPM P+S++WG LLGA H + +AE+AA+ + LEP N
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNG 571
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSN 503
Y +L NIYA +W + ++R+ + I K+ G S +E G H+F+ D+SH +S
Sbjct: 572 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 631
Query: 504 EIFALLD 510
EI+ L+
Sbjct: 632 EIYMKLE 638
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 192/474 (40%), Gaps = 103/474 (21%)
Query: 25 NQVKQIHGYTLRTGIDQTKTLIEKLLEI------PNLHYAQAVLHHSPNSTVFLYNKLLQ 78
+Q KQ+H ++ G+ T +KL ++ YA + P V ++N +++
Sbjct: 48 DQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIK 107
Query: 79 AYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXX-XXXXGQMLHAHFIKSGF 137
+ LY M G +P+ + G+ LH H +K G
Sbjct: 108 GWSKVDCDGEG-VRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGL 166
Query: 138 APDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRL 197
+++ AL+ MY+ G +++AR +FD +V +WN M++G+ R
Sbjct: 167 GSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM------------ 214
Query: 198 MPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
K+YE+++ L + ME + P +VTL +L AC+ + ++
Sbjct: 215 -------------------KEYEESIELLVEME-RNLVSPTSVTLLLVLSACSKVKDKDL 254
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN------------------E 299
+RV Y + +L + NA++ YA CG +D+A R+F E
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVE 314
Query: 300 IGSL------------RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGL 347
G+L R+ SW MI G G ++LE++ +M G PD+ T V +
Sbjct: 315 RGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSV 374
Query: 348 LLACTHGGMVEKGRHI-----FKSMKTDFNI----IPKLEHYGC---------------- 382
L AC H G +E G I +K D + I GC
Sbjct: 375 LTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDK 434
Query: 383 -----MVDLLGRAGKLREAYEV---IQTMPMKPDSVIWGTLLGACSFHGNVELA 428
MV L G+ +EA +V +Q M ++PD + + +L AC+ G V+ A
Sbjct: 435 FTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQA 488
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 311 bits (798), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 280/504 (55%), Gaps = 12/504 (2%)
Query: 24 MNQVKQIHGYTLRTGIDQT-----KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQ 78
+++VKQIH + + +G +L++ +E+ N A+ V P+ V +N ++
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIV 205
Query: 79 AYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSG-- 136
Y LY +M G P++Y G+ +H + G
Sbjct: 206 GYAKQGFSLEA-LKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPV 264
Query: 137 FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFR 196
++ ++ + ALLDMY K LA+R FD M +++ +WN M+ G R GD++ A +F
Sbjct: 265 YSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFD 324
Query: 197 LMPSRNVVSWTTMISGYSKNKQYEKAL-GLFLRMECEEDIMPNAVTLASILPACANLGAL 255
MP R++VSW +++ GYSK ++ + LF M E + P+ VT+ S++ AN G L
Sbjct: 325 QMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGEL 384
Query: 256 EIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMG 315
G+ V + + ++S+A+++MY KCG I+ A+ VF + + +++ W SMI G
Sbjct: 385 SHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF-KTATEKDVALWTSMITG 443
Query: 316 LAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIP 375
LA HG +AL+L+ +M EG TP++VT + +L AC+H G+VE+G H+F MK F P
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 376 KLEHYGCMVDLLGRAGKLREAYEVIQ-TMPMKPDSVIWGTLLGACSFHGNVELAEIAAES 434
+ EHYG +VDLL RAG++ EA +++Q MPM+P +WG++L AC ++E AE+A
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTE 563
Query: 435 LFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFI- 493
L LEP G YV+LSNIYA+ +W K R+ M+ + K+AG+S + LH+F+
Sbjct: 564 LLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVA 623
Query: 494 VEDRSHPKSNEIFALLDGVYEMFK 517
E ++HP+ EI +L +Y K
Sbjct: 624 AEKQNHPRWTEIKRILQHLYNEMK 647
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 193/464 (41%), Gaps = 100/464 (21%)
Query: 14 LRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAV-------LHHSP 66
L N NS+N Q KQ+ +R + + +L+ + Y + + L+ +P
Sbjct: 41 LENCNSRN----QFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTP 96
Query: 67 NSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQ 126
N VF+YN ++ A CF LYS M SP++ +
Sbjct: 97 NPNVFVYNTMISA---VSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---K 150
Query: 127 MLHAHFIKSG-FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
+H H I SG + + +L+ Y ++G +A ++F MP +V ++N M+ G+A+
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
G F L +AL L+ +M + I P+ T+ S+
Sbjct: 211 G--------FSL-----------------------EALKLYFKM-VSDGIEPDEYTVLSL 238
Query: 246 LPACANLGALEIGQRVEAYARKNG--FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
L C +L + +G+ V + + G + NL +SNA+L+MY KC +A R F+ +
Sbjct: 239 LVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK- 297
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQM------------------------------- 332
+++ SWN+M++G G A ++DQM
Sbjct: 298 KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE 357
Query: 333 --LREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYG------CMV 384
+ E PD VT V L+ + G + GR + ++ +L+ G ++
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHGRWV-------HGLVIRLQLKGDAFLSSALI 410
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
D+ + G + A+ V +T K D +W +++ +FHGN + A
Sbjct: 411 DMYCKCGIIERAFMVFKTATEK-DVALWTSMITGLAFHGNGQQA 453
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/421 (39%), Positives = 248/421 (58%), Gaps = 6/421 (1%)
Query: 94 YSQMRLLGHSPNQ--YXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPD-VFAATALLDM 150
+S M L G PN + G +LH + K G + V TA++ M
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 151 YAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMI 210
Y+K G + AR +FD M + TWN M+ G+ R G VD A ++F MP R+++SWT MI
Sbjct: 119 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 178
Query: 211 SGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGF 270
+G+ K E+AL F M+ + P+ V + + L AC NLGAL G V Y F
Sbjct: 179 NGFVKKGYQEEALLWFREMQIS-GVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDF 237
Query: 271 FKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYD 330
N+ VSN+++++Y +CG ++ A +VF + R + SWNS+I+G A +G ++L +
Sbjct: 238 KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK-RTVVSWNSVIVGFAANGNAHESLVYFR 296
Query: 331 QMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRA 390
+M +G PD VTF G L AC+H G+VE+G F+ MK D+ I P++EHYGC+VDL RA
Sbjct: 297 KMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRA 356
Query: 391 GKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG-NVELAEIAAESLFTLEPRNPGNYVIL 449
G+L +A +++Q+MPMKP+ V+ G+LL ACS HG N+ LAE + L L ++ NYVIL
Sbjct: 357 GRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVIL 416
Query: 450 SNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALL 509
SN+YA+ +W+G +K+R+ MKG + K G S +E +H F+ D +H ++ I +L
Sbjct: 417 SNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVL 476
Query: 510 D 510
+
Sbjct: 477 E 477
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 172/468 (36%), Positives = 268/468 (57%), Gaps = 12/468 (2%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
K+IH ++TG + KLL + L YA+ V P T+ YN ++ Y
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 84 XXXXXXCFSL----YSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
+ YS + G++ + +++HA IK
Sbjct: 114 GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVEL 173
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
D TAL+D Y K G LE AR +F+ M V +M++G+ G V+ A E+F
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 200 SRNVVSWTTMISGYSKNKQYEK-ALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG 258
+++V + M+ G+S++ + K ++ +++ M+ PN T AS++ AC+ L + E+G
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQ-RAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 259 QRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAV 318
Q+V A K+G + ++ + +++L+MYAKCG I+ A RVF+++ +N+ SW SMI G
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQE-KNVFSWTSMIDGYGK 351
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLE 378
+G +ALEL+ +M P+ VTF+G L AC+H G+V+KG IF+SM+ D+++ PK+E
Sbjct: 352 NGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKME 411
Query: 379 HYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTL 438
HY C+VDL+GRAG L +A+E + MP +PDS IW LL +C+ HGNVELA IAA LF L
Sbjct: 412 HYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKL 471
Query: 439 EP-RNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEE 485
+ PG Y+ LSN+YAS D+WD V+K+R+VMK +I+K+ G S+ E
Sbjct: 472 NADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSE 519
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 153/335 (45%), Gaps = 24/335 (7%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +HA IK+GF PD+ + LL ++ K G L AR++FDE+P + +N M++G+ +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMEC--------EEDIM 236
G V L L + M + +S K + + R C + D+
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 237 PNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRV 296
+ V + +++ G LE + V + +N+ +++ Y G ++ A +
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKD----ENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 297 FNEIGSLRNLCSWNSMIMGLAVHGKCGK-ALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
FN ++++ +N+M+ G + G+ K ++++Y M R G P+ TF ++ AC+
Sbjct: 229 FNTT-KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 356 MVEKGRHIFKS-MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGT 414
E G+ + MK+ + ++ ++D+ + G + +A V M K + W +
Sbjct: 288 SHEVGQQVHAQIMKS--GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK-NVFSWTS 344
Query: 415 LLGACSFHGNVELAEIAAESLFTL--EPRNPGNYV 447
++ +GN E A LFT E R NYV
Sbjct: 345 MIDGYGKNGNPE----EALELFTRMKEFRIEPNYV 375
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 237 PNAVTLASILPACANLGALE---------IGQRVEAYARKNGFFKNLYVSNAVLEMYAKC 287
P ++S+ PA GAL+ G+++ A K GF +L +S +L ++ KC
Sbjct: 23 PLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKC 82
Query: 288 GHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGL 347
G + A +VF+E+ L ++N MI G HG + L L +M G D T +
Sbjct: 83 GCLSYARQVFDELPK-PTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMV 141
Query: 348 LLAC-THGGMVEKGRHI-----FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQ 401
L A + G + R + + +K D + L +VD ++GKL A V +
Sbjct: 142 LKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVL--ITALVDTYVKSGKLESARTVFE 199
Query: 402 TMPMKPDSVIWGT-LLGACSFHGNVELAE 429
T MK ++V+ T ++ G VE AE
Sbjct: 200 T--MKDENVVCCTSMISGYMNQGFVEDAE 226
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 309 bits (791), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 271/507 (53%), Gaps = 55/507 (10%)
Query: 24 MNQVKQIHGYTLRTGIDQ---TKTLIEKLLEIP----NLHYAQAVLHHSPNSTVFLYNKL 76
M+Q+KQ+H +TLRT + T L K+L++ +++YA V N + F++N L
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTL 120
Query: 77 LQAYXXXXXXXXXCFSLYSQMRLLGHS-PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKS 135
++A F LY +M G S P+++ G+ +H +K
Sbjct: 121 IRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKH 180
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELF 195
GF DV+ L+ +Y G L+LAR++FDEM
Sbjct: 181 GFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM---------------------------- 212
Query: 196 RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL 255
P R++VSW +MI + +Y+ AL LF M+ P+ T+ S+L ACA LG+L
Sbjct: 213 ---PERSLVSWNSMIDALVRFGEYDSALQLFREMQ--RSFEPDGYTMQSVLSACAGLGSL 267
Query: 256 EIGQRVEAYARKN---GFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSM 312
+G A+ + ++ V N+++EMY KCG + +A +VF + R+L SWN+M
Sbjct: 268 SLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK-RDLASWNAM 326
Query: 313 IMGLAVHGKCGKALELYDQML--REGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTD 370
I+G A HG+ +A+ +D+M+ RE P+ VTFVGLL+AC H G V KGR F M D
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 371 FNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG-NVELAE 429
+ I P LEHYGC+VDL+ RAG + EA +++ +MPMKPD+VIW +LL AC G +VEL+E
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Query: 430 IAAESLFTLEPRN-------PGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSF 482
A ++ + N G YV+LS +YASA +W+ V +RK+M I K G S
Sbjct: 447 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 506
Query: 483 LEEGGQLHKFIVEDRSHPKSNEIFALL 509
+E G H+F D SHP++ +I+ L
Sbjct: 507 IEINGISHEFFAGDTSHPQTKQIYQQL 533
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 229/370 (61%), Gaps = 3/370 (0%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
DV A++D + K G + ARRLFDEM + V TW M+ G+ D+D A +LF MP
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
RN+VSW TMI GY +NKQ ++ + LF M+ + P+ VT+ S+LPA ++ GAL +G+
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
+ ++ K + V A+L+MY+KCG I+ A R+F+E+ + + SWN+MI G A++
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE-KQVASWNAMIHGYALN 353
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G AL+L+ M+ E PD++T + ++ AC HGG+VE+GR F M+ + + K+EH
Sbjct: 354 GNARAALDLFVTMMIE-EKPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEH 411
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
YGCMVDLLGRAG L+EA ++I MP +P+ +I + L AC + ++E AE + LE
Sbjct: 412 YGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELE 471
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSH 499
P+N GNYV+L N+YA+ +WD ++ VM+ +Q K G S +E + +FI D +H
Sbjct: 472 PQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTH 531
Query: 500 PKSNEIFALL 509
P I +L
Sbjct: 532 PHRRSIHLVL 541
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 281/503 (55%), Gaps = 38/503 (7%)
Query: 19 SKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPN----LHYAQAVLHHSPNSTVFLYN 74
++N + + K HG +R ++ TL+ L+ + + A+ V ++ +N
Sbjct: 72 ARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWN 131
Query: 75 KLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIK 134
++ Y ++ +MR G +++ + LH +K
Sbjct: 132 TMIGLYTRNRMESEA-LDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVK 190
Query: 135 SGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALEL 194
+ +++ TALLD+YAK G ++ A+++
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIK-------------------------------DAVQV 219
Query: 195 FRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGA 254
F M ++ V+W++M++GY +NK YE+AL L+ R + + N TL+S++ AC+NL A
Sbjct: 220 FESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ-RMSLEQNQFTLSSVICACSNLAA 278
Query: 255 LEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIM 314
L G+++ A K+GF N++V+++ ++MYAKCG + ++ +F+E+ +NL WN++I
Sbjct: 279 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE-KNLELWNTIIS 337
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
G A H + + + L+++M ++G P++VTF LL C H G+VE+GR FK M+T + +
Sbjct: 338 GFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLS 397
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAES 434
P + HY CMVD+LGRAG L EAYE+I+++P P + IWG+LL +C + N+ELAE+AAE
Sbjct: 398 PNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEK 457
Query: 435 LFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIV 494
LF LEP N GN+V+LSNIYA+ QW+ +AK RK+++ + K G S+++ ++H F V
Sbjct: 458 LFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSV 517
Query: 495 EDRSHPKSNEIFALLDGVYEMFK 517
+ HP+ EI + LD + F+
Sbjct: 518 GESGHPRIREICSTLDNLVIKFR 540
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 138/329 (41%), Gaps = 42/329 (12%)
Query: 7 TTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPN----LHYAQAVL 62
+ F S++ + N + K++H +++T ID + LL++ + A V
Sbjct: 161 SEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVF 220
Query: 63 HHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXX 122
+ + ++ ++ Y LY + + + NQ+
Sbjct: 221 ESMQDKSSVTWSSMVAGYVQNKNYEEALL-LYRRAQRMSLEQNQFTLSSVICACSNLAAL 279
Query: 123 XXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
G+ +HA KSGF +VF A++ +DMYAK G+L + +F E+ + + WN
Sbjct: 280 IEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWN------ 333
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
T+ISG++K+ + ++ + LF +M+ ++ + PN VT
Sbjct: 334 -------------------------TIISGFAKHARPKEVMILFEKMQ-QDGMHPNEVTF 367
Query: 243 ASILPACANLGALEIGQRVEAYARKN-GFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
+S+L C + G +E G+R R G N+ + ++++ + G + A+ + I
Sbjct: 368 SSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 427
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYD 330
W S++ V+ K LEL +
Sbjct: 428 FDPTASIWGSLLASCRVY----KNLELAE 452
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 283/556 (50%), Gaps = 80/556 (14%)
Query: 26 QVKQIHGYTLRTGIDQTKTLIEKLLEIP----NLHYAQAVLHHSPNSTVFLYNKLLQAYX 81
Q+KQIH L G+ + LI KL+ ++ +A+ V P +F +N +++ Y
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 82 XXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV 141
+YS M+L SP+ + G+ +HA + GF DV
Sbjct: 96 RNNHFQDALL-MYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 142 FAA---------------------------------TALLDMYAKVGTLELARRLFDEMP 168
F TA++ YA+ G A +F +M
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 169 VREV-PTWNAMMA--------------------------------------GHARFGDVD 189
+V P W A+++ +A+ G V
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 190 GALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPAC 249
A LF M S N++ W MISGY+KN +A+ +F M +D+ P+ +++ S + AC
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM-INKDVRPDTISITSAISAC 333
Query: 250 ANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSW 309
A +G+LE + + Y ++ + ++++S+A+++M+AKCG ++ A VF+ R++ W
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD-RDVVVW 392
Query: 310 NSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKT 369
++MI+G +HG+ +A+ LY M R G P+DVTF+GLL+AC H GMV +G F M
Sbjct: 393 SAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-A 451
Query: 370 DFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAE 429
D I P+ +HY C++DLLGRAG L +AYEVI+ MP++P +WG LL AC H +VEL E
Sbjct: 452 DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGE 511
Query: 430 IAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQL 489
AA+ LF+++P N G+YV LSN+YA+A WD VA++R MK + K G S++E G+L
Sbjct: 512 YAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRL 571
Query: 490 HKFIVEDRSHPKSNEI 505
F V D+SHP+ EI
Sbjct: 572 EAFRVGDKSHPRYEEI 587
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 305 bits (780), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 226/362 (62%), Gaps = 3/362 (0%)
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP-SRNV 203
A++ Y + G LE A F PVR V W AM+ G+ + V+ A +F+ M ++N+
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
V+W MISGY +N + E L LF R EE I PN+ L+S L C+ L AL++G+++
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLF-RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ 308
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
K+ ++ +++ MY KCG + AW++F E+ +++ +WN+MI G A HG
Sbjct: 309 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF-EVMKKKDVVAWNAMISGYAQHGNAD 367
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
KAL L+ +M+ PD +TFV +LLAC H G+V G F+SM D+ + P+ +HY CM
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCM 427
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
VDLLGRAGKL EA ++I++MP +P + ++GTLLGAC H NVELAE AAE L L +N
Sbjct: 428 VDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNA 487
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSN 503
YV L+NIYAS ++W+ VA++RK MK S + K G+S++E ++H F DR HP+ +
Sbjct: 488 AGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELD 547
Query: 504 EI 505
I
Sbjct: 548 SI 549
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 47/307 (15%)
Query: 125 GQMLHAHFIKSGFA-PDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA 183
+M+ AH + PD F+ +L Y + E A+ FD MP ++ +WN M+ G+A
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
R G+++ A ELF M +N VSW MISGY + EKA F
Sbjct: 167 RRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFF----------------- 209
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
+ P + + A++ Y K +++A +F ++
Sbjct: 210 KVAPV-----------------------RGVVAWTAMITGYMKAKKVELAEAMFKDMTVN 246
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
+NL +WN+MI G + + L+L+ ML EG P+ LL C+ ++ GR I
Sbjct: 247 KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306
Query: 364 FK--SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
+ S T N + L ++ + + G+L +A+++ + M K D V W ++ +
Sbjct: 307 HQIVSKSTLCNDVTALTS---LISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQ 362
Query: 422 HGNVELA 428
HGN + A
Sbjct: 363 HGNADKA 369
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 38 GIDQTKTLIEKLLEIPNLHYAQAVLHH-SPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQ 96
G+ +I ++ + A+A+ + N + +N ++ Y L+
Sbjct: 216 GVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDG-LKLFRA 274
Query: 97 MRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGT 156
M G PN G+ +H KS DV A T+L+ MY K G
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 334
Query: 157 LELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKN 216
L A +LF+ M ++V WNAM++G+A+ G+ D AL LFR M
Sbjct: 335 LGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM------------------ 376
Query: 217 KQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG 258
+ I P+ +T ++L AC + G + IG
Sbjct: 377 --------------IDNKIRPDWITFVAVLLACNHAGLVNIG 404
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 262/462 (56%), Gaps = 9/462 (1%)
Query: 26 QVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQAYX 81
++ +IH + LR + + L+ + I N YA V H N V ++N +++ Y
Sbjct: 19 RLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 82 XXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV 141
S +S M+ G ++Y G+ +H I++GF
Sbjct: 79 LVGPPLES-LSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLG 137
Query: 142 FAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
++++Y G + A+++FDEM R V WN M+ G GDV+ L LF+ M R
Sbjct: 138 KIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSER 197
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
++VSW +MIS SK + +AL LF M ++ P+ T+ ++LP A+LG L+ G+ +
Sbjct: 198 SIVSWNSMISSLSKCGRDREALELFCEM-IDQGFDPDEATVVTVLPISASLGVLDTGKWI 256
Query: 262 EAYARKNGFFKN-LYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
+ A +G FK+ + V NA+++ Y K G ++ A +F ++ RN+ SWN++I G AV+G
Sbjct: 257 HSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM-QRRNVVSWNTLISGSAVNG 315
Query: 321 KCGKALELYDQMLREG-TTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
K ++L+D M+ EG P++ TF+G+L C++ G VE+G +F M F + + EH
Sbjct: 316 KGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEH 375
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
YG MVDL+ R+G++ EA++ ++ MP+ ++ +WG+LL AC HG+V+LAE+AA L +E
Sbjct: 376 YGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIE 435
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHS 481
P N GNYV+LSN+YA +W V K+R +MK +++ KS G S
Sbjct: 436 PGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 258/469 (55%), Gaps = 33/469 (7%)
Query: 44 TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS 103
TL++ + +L A+AV + +V Y ++ Y L+ +M G S
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA-VKLFEEMEEEGIS 394
Query: 104 PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRL 163
P+ Y G+ +H ++ D+F + AL+DMYAK G+++ A +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 164 FDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKAL 223
F M ++++SW T+I GYSKN +AL
Sbjct: 455 -------------------------------FSEMRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 224 GLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEM 283
LF + E+ P+ T+A +LPACA+L A + G+ + Y +NG+F + +V+N++++M
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 284 YAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
YAKCG + +A +F++I S ++L SW MI G +HG +A+ L++QM + G D+++
Sbjct: 544 YAKCGALLLAHMLFDDIAS-KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 344 FVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
FV LL AC+H G+V++G F M+ + I P +EHY C+VD+L R G L +AY I+ M
Sbjct: 603 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
Query: 404 PMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVA 463
P+ PD+ IWG LL C H +V+LAE AE +F LEP N G YV+++NIYA A++W+ V
Sbjct: 663 PIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVK 722
Query: 464 KLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGV 512
+LRK + + K+ G S++E G+++ F+ D S+P++ I A L V
Sbjct: 723 RLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 771
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 190/421 (45%), Gaps = 41/421 (9%)
Query: 8 TFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKT----LIEKLLEIPNLHYAQAVLH 63
++ FS + S ++ +Q+HG+ L++G + + L+ L+ + A+ V
Sbjct: 195 SYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFD 254
Query: 64 HSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXX 123
V +N ++ Y S++ QM + G +
Sbjct: 255 EMTERDVISWNSIINGYVSNGLAEKG-LSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS 313
Query: 124 XGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA 183
G+ +H+ +K+ F+ + LLDMY+K G L+ A+ +F EM R V ++ +M+AG+A
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
R G A++LF M EE I P+ T+
Sbjct: 374 REGLAGEAVKLFEEME--------------------------------EEGISPDVYTVT 401
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
++L CA L+ G+RV + ++N +++VSNA+++MYAKCG + A VF+E+ +
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM-RV 460
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGT-TPDDVTFVGLLLACTHGGMVEKGRH 362
+++ SWN++I G + + +AL L++ +L E +PD+ T +L AC +KGR
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
I + + +VD+ + G L A+ + + K D V W ++ H
Sbjct: 521 IHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMH 578
Query: 423 G 423
G
Sbjct: 579 G 579
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 125/276 (45%), Gaps = 37/276 (13%)
Query: 131 HFIK-SGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVD 189
+FI+ +GF D + L MY G L+ A R+FDE+ + + WN +M A+ GD
Sbjct: 118 NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFS 177
Query: 190 GALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPAC 249
G++ GLF +M + ++ T + + +
Sbjct: 178 GSI-------------------------------GLFKKM-MSSGVEMDSYTFSCVSKSF 205
Query: 250 ANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSW 309
++L ++ G+++ + K+GF + V N+++ Y K +D A +VF+E+ + R++ SW
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM-TERDVISW 264
Query: 310 NSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK-SMK 368
NS+I G +G K L ++ QML G D T V + C ++ GR + +K
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK 324
Query: 369 TDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP 404
F+ + ++D+ + G L A V + M
Sbjct: 325 ACFSREDRF--CNTLLDMYSKCGDLDSAKAVFREMS 358
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR 260
R+V T + + ++ E A+ L L + + DI P TL S+L CA+ +L+ G+
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKL-LCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
V+ + R NGF + + + + MY CG + A RVF+E+ + L WN ++ LA G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKAL-FWNILMNELAKSG 174
Query: 321 KCGKALELYDQMLREGTTPDDVTF 344
++ L+ +M+ G D TF
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTF 198
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 265/494 (53%), Gaps = 44/494 (8%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLL-------EIPNLHYAQAVLHH--SPNSTVFLYN 74
+ +++Q H + L+TG+ KL+ E + YA ++L+ SPN F +N
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNG--FTHN 109
Query: 75 KLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIK 134
+++AY +++ +M L P++Y G+ +H FIK
Sbjct: 110 SVIRAYANSSTPEV-ALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 135 SGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVRE----------------------- 171
SG DVF L+++Y + G E+AR++ D MPVR+
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 172 --------VPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKAL 223
V +WN M++G+A G V A E+F MP R+VVSW M++ Y+ Y + L
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 224 GLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEM 283
+F +M + P+ TL S+L ACA+LG+L G+ V Y K+G +++ A+++M
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 284 YAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
Y+KCG ID A VF S R++ +WNS+I L+VHG ALE++ +M+ EG P+ +T
Sbjct: 349 YSKCGKIDKALEVFRAT-SKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGIT 407
Query: 344 FVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
F+G+L AC H GM+++ R +F+ M + + + P +EHYGCMVDLLGR GK+ EA E++ +
Sbjct: 408 FIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
Query: 404 PMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVA 463
P S++ +LLGAC G +E AE A L L R+ Y +SN+YAS +W+ V
Sbjct: 468 PADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVI 527
Query: 464 KLRKVMKGSQITKS 477
R+ M+ ++ +S
Sbjct: 528 DGRRNMRAERVNRS 541
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 261/490 (53%), Gaps = 40/490 (8%)
Query: 29 QIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
Q H + ++ G+D +LI +A + + + V + ++ +
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 85 XXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP-DVFA 143
+ +M+ G + N+ G+ +H ++++G DVF
Sbjct: 184 SASEA-MVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
++L+DMY K + A+++FDEM PSRNV
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEM-------------------------------PSRNV 271
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
V+WT +I+GY +++ ++K + +F M + D+ PN TL+S+L ACA++GAL G+RV
Sbjct: 272 VTWTALIAGYVQSRCFDKGMLVFEEM-LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
Y KN N ++++Y KCG ++ A VF + +N+ +W +MI G A HG
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE-KNVYTWTAMINGFAAHGYAR 389
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
A +L+ ML +P++VTF+ +L AC HGG+VE+GR +F SMK FN+ PK +HY CM
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
VDL GR G L EA +I+ MPM+P +V+WG L G+C H + EL + AA + L+P +
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHS 509
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHP-KS 502
G Y +L+N+Y+ + WD VA++RK MK Q+ KS G S++E G+L +FI D P +S
Sbjct: 510 GRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLES 569
Query: 503 NEIFALLDGV 512
++++ LD V
Sbjct: 570 DDLYKTLDTV 579
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 18/242 (7%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLL-----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
+ +HG L TG + I L + AQ V P+ V + L+ Y
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 83 XXXXXXXCFS----LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFA 138
CF ++ +M +PN+ G+ +H + IK+
Sbjct: 284 SR-----CFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIE 338
Query: 139 PDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLM 198
+ A T L+D+Y K G LE A +F+ + + V TW AM+ G A G A +LF M
Sbjct: 339 INTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Query: 199 PSRNV----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGA 254
S +V V++ ++S + E+ LFL M+ ++ P A A ++ G
Sbjct: 399 LSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGL 458
Query: 255 LE 256
LE
Sbjct: 459 LE 460
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 269/510 (52%), Gaps = 43/510 (8%)
Query: 14 LRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLE----IPNLHYAQAVLHHSPNST 69
LR +SK Q+K+IH LRTG + +L+ +LLE I ++ YA+ V
Sbjct: 17 LRASSSKP---KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR 73
Query: 70 VFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLH 129
+FL+N L + Y LY +MR LG P+++ G LH
Sbjct: 74 IFLWNTLFKGYVRNQLPFESLL-LYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALH 132
Query: 130 AHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVD 189
AH +K GF AT L+ MY K FG++
Sbjct: 133 AHVVKYGFGCLGIVATELVMMYMK-------------------------------FGELS 161
Query: 190 GALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPAC 249
A LF M +++V+W ++ + AL F +M C + + ++ T+ S+L AC
Sbjct: 162 SAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM-CADAVQFDSFTVVSMLSAC 220
Query: 250 ANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSW 309
LG+LEIG+ + ARK N+ V NA L+M+ KCG+ + A +F E+ RN+ SW
Sbjct: 221 GQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQ-RNVVSW 279
Query: 310 NSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM-- 367
++MI+G A++G +AL L+ M EG P+ VTF+G+L AC+H G+V +G+ F M
Sbjct: 280 STMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ 339
Query: 368 KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVEL 427
D N+ P+ EHY CMVDLLGR+G L EAYE I+ MP++PD+ IWG LLGAC+ H ++ L
Sbjct: 340 SNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMIL 399
Query: 428 AEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGG 487
+ A+ L P +V+LSNIYA+A +WD V K+R M+ K A +S +E G
Sbjct: 400 GQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEG 459
Query: 488 QLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
++H F D+SHP+S I+ LD + + +
Sbjct: 460 KIHFFNRGDKSHPQSKAIYEKLDEILKKIR 489
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 298 bits (764), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 272/518 (52%), Gaps = 41/518 (7%)
Query: 1 MVLSGTTTFKF--STLRNPNSKNIGMNQVKQIHGYTLRTGI--DQTKTLIE---KLLEIP 53
MVLSG + KF S++ + ++ ++ KQ+H + +R+G+ D +L++ K
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADG 319
Query: 54 NLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGH-SPNQYXXXXX 112
++ + V + +V + L+ Y +L+S+M GH PN +
Sbjct: 320 SVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 113 XXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREV 172
G+ + K G A + A +++ M+ K +E A+R F+ +
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS---- 435
Query: 173 PTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECE 232
+N+VS+ T + G +N +E+A L + E
Sbjct: 436 ---------------------------EKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT-E 467
Query: 233 EDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDV 292
++ +A T AS+L AN+G++ G+++ + K G N V NA++ MY+KCG ID
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 293 AWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
A RVFN + + RN+ SW SMI G A HG + LE ++QM+ EG P++VT+V +L AC+
Sbjct: 528 ASRVFNFMEN-RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIW 412
H G+V +G F SM D I PK+EHY CMVDLL RAG L +A+E I TMP + D ++W
Sbjct: 587 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 646
Query: 413 GTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGS 472
T LGAC H N EL ++AA + L+P P Y+ LSNIYA A +W+ ++R+ MK
Sbjct: 647 RTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKER 706
Query: 473 QITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
+ K G S++E G ++HKF V D +HP +++I+ LD
Sbjct: 707 NLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELD 744
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+++HA I+ PD +L+ +Y+K G A +F+ M R
Sbjct: 81 GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM---------------RR 125
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
FG R+VVSW+ M++ Y N + A+ +F+ E ++PN +
Sbjct: 126 FG-------------KRDVVSWSAMMACYGNNGRELDAIKVFVEF-LELGLVPNDYCYTA 171
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFK-NLYVSNAVLEMYAKC-GHIDVAWRVFNEIGS 302
++ AC+N + +G+ + K G F+ ++ V ++++M+ K + A++VF+++
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
L N+ +W MI G +A+ + M+ G D T + AC + G+
Sbjct: 232 L-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290
Query: 363 I 363
+
Sbjct: 291 L 291
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 227 LRMECEEDIMP-NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYA 285
L + + I P ++VT +S+L +C +G+ V A + + + N+++ +Y+
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYS 108
Query: 286 KCGHIDVAWRVFNEIGSL--RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
K G A VF + R++ SW++M+ +G+ A++++ + L G P+D
Sbjct: 109 KSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYC 168
Query: 344 FVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY------GC-MVDLLGRA-GKLRE 395
+ ++ AC++ V GR + K H+ GC ++D+ +
Sbjct: 169 YTAVIRACSNSDFVGVGR-------VTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 396 AYEVIQTMPMKPDSVIWGTLLGAC 419
AY+V M + + V W ++ C
Sbjct: 222 AYKVFDKMS-ELNVVTWTLMITRC 244
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 168/493 (34%), Positives = 256/493 (51%), Gaps = 10/493 (2%)
Query: 28 KQIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
+Q+HG+ +R G D +I + N+ A+ V V +N ++ Y
Sbjct: 152 RQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQS 211
Query: 84 XXXXXXCFSLYSQMRLLGH-SPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVF 142
C +Y M PN G +H I++ D+
Sbjct: 212 GSFED-CKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLS 270
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRN 202
A++ YAK G+L+ AR LFDEM ++ T+ A+++G+ G V A+ LF M S
Sbjct: 271 LCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRM-ECEEDIMPNAVTLASILPACANLGALEIGQRV 261
+ +W MISG +N +E+ + F M C PN VTL+S+LP+ L+ G+ +
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIRCGS--RPNTVTLSSLLPSLTYSSNLKGGKEI 388
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
A+A +NG N+YV+ ++++ YAK G + A RVF+ R+L +W ++I AVHG
Sbjct: 389 HAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKD-RSLIAWTAIITAYAVHGD 447
Query: 322 CGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYG 381
A L+DQM GT PDDVT +L A H G + +HIF SM T ++I P +EHY
Sbjct: 448 SDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYA 507
Query: 382 CMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPR 441
CMV +L RAGKL +A E I MP+ P + +WG LL S G++E+A A + LF +EP
Sbjct: 508 CMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPE 567
Query: 442 NPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPK 501
N GNY I++N+Y A +W+ +R MK + K G S++E L FI +D S +
Sbjct: 568 NTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCER 627
Query: 502 SNEIFALLDGVYE 514
S E++ +++G+ E
Sbjct: 628 SKEMYEIIEGLVE 640
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 134/305 (43%), Gaps = 33/305 (10%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
LHA + PD F A+ L+ Y + A +FDE+ VR ++NA++ +
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
A LF +SW S YS + P++++++ +L
Sbjct: 104 YFDAFSLF--------LSWIGS-SCYSSDAA-----------------RPDSISISCVLK 137
Query: 248 A---CANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
A C + + ++V + + GF +++V N ++ Y KC +I+ A +VF+E+ S R
Sbjct: 138 ALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEM-SER 196
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLR-EGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
++ SWNSMI G + G ++Y ML P+ VT + + AC + G +
Sbjct: 197 DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEV 256
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
K M + +I L ++ + G L A + M K DSV +G ++ HG
Sbjct: 257 HKKMIEN-HIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK-DSVTYGAIISGYMAHG 314
Query: 424 NVELA 428
V+ A
Sbjct: 315 LVKEA 319
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 274/519 (52%), Gaps = 44/519 (8%)
Query: 1 MVLSGTTTFKFS---TLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPN--- 54
M+ SG++ FS L++ S ++ ++ +Q+H + + G + ++ L+ +
Sbjct: 44 MLRSGSSPDAFSFPFILKSCASLSLPVSG-QQLHCHVTKGGCETEPFVLTALISMYCKCG 102
Query: 55 -LHYAQAVLHHSPNSTVF--LYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXX 111
+ A+ V +P S+ YN L+ Y + ++ +M+ G S +
Sbjct: 103 LVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAY-MFRRMKETGVSVDSVTMLG 161
Query: 112 XXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVRE 171
G+ LH +K G +V + + MY K G++E RR
Sbjct: 162 LVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRR--------- 212
Query: 172 VPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMEC 231
LF MP + +++W +ISGYS+N L L+ +M+
Sbjct: 213 ----------------------LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMK- 249
Query: 232 EEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHID 291
+ P+ TL S+L +CA+LGA +IG V NGF N++VSNA + MYA+CG++
Sbjct: 250 SSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLA 309
Query: 292 VAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLAC 351
A VF+ I +++L SW +MI +HG L L+D M++ G PD FV +L AC
Sbjct: 310 KARAVFD-IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSAC 368
Query: 352 THGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVI 411
+H G+ +KG +F++MK ++ + P EHY C+VDLLGRAG+L EA E I++MP++PD +
Sbjct: 369 SHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAV 428
Query: 412 WGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKG 471
WG LLGAC H NV++AE+A + EP N G YV++SNIY+ + +G+ ++R +M+
Sbjct: 429 WGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRE 488
Query: 472 SQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
K G+S++E G++H F+ DRSH ++ E+ +LD
Sbjct: 489 RAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLD 527
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 152/338 (44%), Gaps = 33/338 (9%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
SLY M G SP+ + GQ LH H K G + F TAL+ M
Sbjct: 38 ISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISM 97
Query: 151 YAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMI 210
Y K G + AR++F+E P S+ V + +I
Sbjct: 98 YCKCGLVADARKVFEENP-----------------------------QSSQLSVCYNALI 128
Query: 211 SGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGF 270
SGY+ N + A +F RM+ E + ++VT+ ++P C L +G+ + K G
Sbjct: 129 SGYTANSKVTDAAYMFRRMK-ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGL 187
Query: 271 FKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYD 330
+ V N+ + MY KCG ++ R+F+E+ ++ L +WN++I G + +G LELY+
Sbjct: 188 DSEVAVLNSFITMYMKCGSVEAGRRLFDEM-PVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 331 QMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRA 390
QM G PD T V +L +C H G + G + K ++++ +P + + + R
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVFVSNASISMYARC 305
Query: 391 GKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
G L +A V MP+K V W ++G HG E+
Sbjct: 306 GNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIG 342
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 269/519 (51%), Gaps = 41/519 (7%)
Query: 1 MVLSGT--TTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQ----TKTLIEKLLEIPN 54
M+ SG FS+L SK + KQIH Y +R I T LI+ +
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 55 LHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXX 114
+ AQ + + V ++ ++ Y ++ + + SPN+
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS-LEMFRWLVKVKISPNEITLVSILP 449
Query: 115 XXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPT 174
G+ LH IK GF A++DMYAK G + LA
Sbjct: 450 VIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLA-------------- 495
Query: 175 WNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEED 234
E+F + R++VSW +MI+ +++ A+ +F +M
Sbjct: 496 -----------------YEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS-G 537
Query: 235 IMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAW 294
I + V++++ L ACANL + G+ + + K+ ++Y + +++MYAKCG++ A
Sbjct: 538 ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAM 597
Query: 295 RVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQML-REGTTPDDVTFVGLLLACTH 353
VF + +N+ SWNS+I HGK +L L+ +M+ + G PD +TF+ ++ +C H
Sbjct: 598 NVFKTMKE-KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCH 656
Query: 354 GGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWG 413
G V++G F+SM D+ I P+ EHY C+VDL GRAG+L EAYE +++MP PD+ +WG
Sbjct: 657 VGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWG 716
Query: 414 TLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQ 473
TLLGAC H NVELAE+A+ L L+P N G YV++SN +A+A +W+ V K+R +MK +
Sbjct: 717 TLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKERE 776
Query: 474 ITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGV 512
+ K G+S++E + H F+ D +HP+S+ I++LL+ +
Sbjct: 777 VQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 170/397 (42%), Gaps = 60/397 (15%)
Query: 44 TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS 103
+LI+ LE + + ++N +L Y +S MR+ S
Sbjct: 178 SLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV-IKGFSVMRMDQIS 236
Query: 104 PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRL 163
PN G LH + SG + +LL MY+K G + A +L
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 164 FDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKAL 223
F M + TWN M++G+ + G ++ +L F M S V
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV-------------------- 336
Query: 224 GLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEM 283
+P+A+T +S+LP+ + LE +++ Y ++ ++++++A+++
Sbjct: 337 ------------LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDA 384
Query: 284 YAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
Y KC + +A +F++ S+ ++ + +MI G +G +LE++ +++ +P+++T
Sbjct: 385 YFKCRGVSMAQNIFSQCNSV-DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEIT 443
Query: 344 FV------GLLLACT-----HGGMVEKGRHIFKSMKTDFNIIPKLEHYGC-MVDLLGRAG 391
V G+LLA HG +++KG NI GC ++D+ + G
Sbjct: 444 LVSILPVIGILLALKLGRELHGFIIKKG------FDNRCNI-------GCAVIDMYAKCG 490
Query: 392 KLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
++ AYE+ + + K D V W +++ C+ N A
Sbjct: 491 RMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAA 526
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 96/188 (51%), Gaps = 2/188 (1%)
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
++++ + +G +D +LF + ++ V W M++GY+K + + F M ++ I
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ-I 235
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWR 295
PNAVT +L CA+ +++G ++ +G + N++L MY+KCG D A +
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 296 VFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
+F + S + +WN MI G G ++L + +M+ G PD +TF LL + +
Sbjct: 296 LFRMM-SRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFE 354
Query: 356 MVEKGRHI 363
+E + I
Sbjct: 355 NLEYCKQI 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 123/305 (40%), Gaps = 57/305 (18%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +HA I + + D + +L MYA G+ ++F + +R
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR------------- 100
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
++ W ++IS + +N +AL + +M C + P+ T
Sbjct: 101 ----------------SSIRPWNSIISSFVRNGLLNQALAFYFKMLCF-GVSPDVSTFPC 143
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ AC L + + G N +V++++++ Y + G IDV ++F+ + L+
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV--LQ 201
Query: 305 NLCS-WNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT----------- 352
C WN M+ G A G ++ + M + +P+ VTF +L C
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIW 412
HG +V G S+K ++ + + G+ +A ++ + M + D+V W
Sbjct: 262 HGLVVVSGVDFEGSIKNS------------LLSMYSKCGRFDDASKLFRMMS-RADTVTW 308
Query: 413 GTLLG 417
++
Sbjct: 309 NCMIS 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 219 YEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSN 278
Y+K+L L E+ +P ++L +L AC+N L G++V A+ N + Y
Sbjct: 17 YKKSLPLRNSSRFLEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDE 74
Query: 279 AVLEMYAKCGHIDVAWRVFNEIGSLR-NLCSWNSMIMGLAVHGKCGKALELYDQMLREGT 337
+L MYA CG ++F + R ++ WNS+I +G +AL Y +ML G
Sbjct: 75 RILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV 134
Query: 338 TPDDVTFVGLLLACT 352
+PD TF L+ AC
Sbjct: 135 SPDVSTFPCLVKACV 149
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 269/502 (53%), Gaps = 46/502 (9%)
Query: 25 NQVKQIHGYTLRTGIDQ----TKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAY 80
N+ IH Y+++ G++ + LI+ E L Q V + +N +++AY
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 81 XXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPD 140
SL+ +MRL S PD
Sbjct: 324 ELNEQPLRA-ISLFQEMRL-----------------------------------SRIQPD 347
Query: 141 VFAATALLDMYAKVGTLELARR-----LFDEMPVREVPTWNAMMAGHARFGDVDGALELF 195
+L + +++G + R L + ++ NA++ +A+ G VD A +F
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 196 RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL 255
+P+ +V+SW T+ISGY++N +A+ ++ ME E +I N T S+LPAC+ GAL
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 256 EIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMG 315
G ++ KNG + +++V ++ +MY KCG ++ A +F +I + N WN++I
Sbjct: 468 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV-NSVPWNTLIAC 526
Query: 316 LAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIP 375
HG KA+ L+ +ML EG PD +TFV LL AC+H G+V++G+ F+ M+TD+ I P
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586
Query: 376 KLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESL 435
L+HYGCMVD+ GRAG+L A + I++M ++PD+ IWG LL AC HGNV+L +IA+E L
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL 646
Query: 436 FTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVE 495
F +EP + G +V+LSN+YASA +W+GV ++R + G + K+ G S +E ++ F
Sbjct: 647 FEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTG 706
Query: 496 DRSHPKSNEIFALLDGVYEMFK 517
+++HP E++ L + K
Sbjct: 707 NQTHPMYEEMYRELTALQAKLK 728
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 214/497 (43%), Gaps = 94/497 (18%)
Query: 7 TTFKFST-LRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHS 65
T F++ T L++ + + KQI + + L+ + N+ A+ H
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCI------SAKLVNLYCYLGNVALARHTFDHI 112
Query: 66 PNSTVFLYNKLLQAYXXX--XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXX 123
N V+ +N ++ Y CFSL+ M G +P+
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPD---YRTFPSVLKACRTVI 167
Query: 124 XGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA 183
G +H +K GF DV+ A +L+ +Y++ + AR LFDEMPVR++ +WNAM++G+
Sbjct: 168 DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC 227
Query: 184 RFGDVDGALEL---FRLMPSRNVVSWTT-------------------------------- 208
+ G+ AL L R M S VVS +
Sbjct: 228 QSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 209 MISGYSKNKQYEKALGLFLRMECEEDIMPNAVT--------------------LASILPA 248
+I Y++ + +F RM + I N++ L+ I P
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
Query: 249 C----------ANLGALEIGQRVEAYA-RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
C + LG + + V+ + RK F +++ + NAV+ MYAK G +D A VF
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 298 NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREG-TTPDDVTFVGLLLACTHGGM 356
N + + ++ SWN++I G A +G +A+E+Y+ M EG + T+V +L AC+ G
Sbjct: 408 NWLPN-TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 357 VEK-----GRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVI 411
+ + GR + + D ++ L D+ G+ G+L +A + +P + +SV
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSL------ADMYGKCGRLEDALSLFYQIP-RVNSVP 519
Query: 412 WGTLLGACSFHGNVELA 428
W TL+ FHG+ E A
Sbjct: 520 WNTLIACHGFHGHGEKA 536
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 276/549 (50%), Gaps = 73/549 (13%)
Query: 3 LSGTTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQA-- 60
LS + TL I +NQ IH +R G++Q + LI + + +
Sbjct: 5 LSHPSLLSLETLFKLCKSEIHLNQ---IHARIIRKGLEQDQNLISIFISSSSSSSSSLSY 61
Query: 61 ---VLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXX 117
V P+ +L+N L++ Y L MR P++Y
Sbjct: 62 SSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCS 121
Query: 118 XXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKV----------------------- 154
G +H ++ GF DV T+ +D Y K
Sbjct: 122 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTA 181
Query: 155 --------GTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSW 206
G LE A+ +FD MP R + +WNA++ G + GD+ A +LF MP R+++S+
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 241
Query: 207 TTMISGYSK-------------------------------NKQYEKALGLFLRMECEEDI 235
T+MI GY+K N Q +A +F M C +++
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM-CAKNV 300
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYA-RKNGFFKNLYVSNAVLEMYAKCGHIDVAW 294
P+ + ++ AC+ +G E+ ++V++Y ++ F + YV A+++M AKCGH+D A
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAA 360
Query: 295 RVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
++F E+ R+L S+ SM+ G+A+HG +A+ L+++M+ EG PD+V F +L C
Sbjct: 361 KLFEEMPQ-RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQS 419
Query: 355 GMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGT 414
+VE+G F+ M+ ++I+ +HY C+V+LL R GKL+EAYE+I++MP + + WG+
Sbjct: 420 RLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGS 479
Query: 415 LLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQI 474
LLG CS HGN E+AE+ A LF LEP++ G+YV+LSNIYA+ D+W VA LR M + I
Sbjct: 480 LLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGI 539
Query: 475 TKSAGHSFL 483
TK G S++
Sbjct: 540 TKICGRSWI 548
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 294 bits (753), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 233/417 (55%), Gaps = 33/417 (7%)
Query: 94 YSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAK 153
+ +M++ G +QY G+ +HA I++ F ++ +AL+DMY K
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 154 VGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGY 213
L A+ +FD M +NVVSWT M+ GY
Sbjct: 318 CKCLHYAKTVFDRMK-------------------------------QKNVVSWTAMVVGY 346
Query: 214 SKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKN 273
+ + E+A+ +FL M+ I P+ TL + ACAN+ +LE G + A +G
Sbjct: 347 GQTGRAEEAVKIFLDMQ-RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY 405
Query: 274 LYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQML 333
+ VSN+++ +Y KCG ID + R+FNE+ ++R+ SW +M+ A G+ + ++L+D+M+
Sbjct: 406 VTVSNSLVTLYGKCGDIDDSTRLFNEM-NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 334 REGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKL 393
+ G PD VT G++ AC+ G+VEKG+ FK M +++ I+P + HY CM+DL R+G+L
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 394 REAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIY 453
EA I MP PD++ W TLL AC GN+E+ + AAESL L+P +P Y +LS+IY
Sbjct: 525 EEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIY 584
Query: 454 ASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
AS +WD VA+LR+ M+ + K G S+++ G+LH F +D S P ++I+A L+
Sbjct: 585 ASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLE 641
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 154/294 (52%), Gaps = 5/294 (1%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H IK GF + + LL MYA VG + A+++F + R +N++M G
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G ++ AL+LFR M ++ VSW MI G ++N ++A+ F M+ + M + S
Sbjct: 218 CGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM-DQYPFGS 275
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+LPAC LGA+ G+++ A + F ++YV +A+++MY KC + A VF+ + +
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ-K 334
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
N+ SW +M++G G+ +A++++ M R G PD T + AC + +E+G F
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ-F 393
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
+I + +V L G+ G + ++ + M ++ D+V W ++ A
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 167/397 (42%), Gaps = 60/397 (15%)
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
+M+H + I++ P+ F ++ YA + + ARR+FD +P + +WN ++ +++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
G + F +P R+ V+W +I GYS + A+ + M + VTL ++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI----- 300
L ++ G + +G+++ K GF L V + +L MYA G I A +VF +
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 301 ------------------------GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREG 336
G ++ SW +MI GLA +G +A+E + +M +G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 337 TTPDDVTFVGLLLACTHGGMVEKGRHIFKS-MKTDFNIIPKLEHYGCMVDLLGRAGKLRE 395
D F +L AC G + +G+ I ++T+F + ++D+ + L
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ--DHIYVGSALIDMYCKCKCLHY 323
Query: 396 AYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPR--NPGNYVILSNIY 453
A V M K + V W ++ +G AE A + ++ +P +Y +
Sbjct: 324 AKTVFDRMKQK-NVVSWTAMVVG---YGQTGRAEEAVKIFLDMQRSGIDPDHYTL----- 374
Query: 454 ASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLH 490
G I+ A S LEEG Q H
Sbjct: 375 -----------------GQAISACANVSSLEEGSQFH 394
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 118/295 (40%), Gaps = 38/295 (12%)
Query: 24 MNQVKQIHGYTLRTGIDQ----TKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQA 79
+N+ KQIH +RT LI+ + LHYA+ V V + ++
Sbjct: 286 INEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVG 345
Query: 80 YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
Y ++ M+ G P+ Y G H I SG
Sbjct: 346 YGQTGRAEE-AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH 404
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
V + +L+ +Y K G ++ + RLF+EM VR+ +W AM++ +A+FG ++LF M
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM- 463
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
+ + P+ VTL ++ AC+ G +E GQ
Sbjct: 464 -------------------------------VQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 260 R-VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
R + + G ++ + +++++++ G ++ A R N + + W +++
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 264/509 (51%), Gaps = 44/509 (8%)
Query: 21 NIGMNQVKQIHGYTLRTGIDQTKTLIEKLLE------IP-NLHYAQAVLHHSPNSTVFLY 73
+ G ++QIH LRT + + + L IP +++Y+ V N T+
Sbjct: 21 STGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHC 80
Query: 74 NKLLQAYXXXXXXXXXCFSLYSQMRLLGHSP-NQYXXXXXXXXXXXXXXXXXGQMLHAHF 132
N +++A+ F L+ +R P N G +H
Sbjct: 81 NTMIRAFSLSQTPCEG-FRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKI 139
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGAL 192
GF D T L+D+Y+ A ++FDE+P
Sbjct: 140 FSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIP------------------------ 175
Query: 193 ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEED--IMPNAVTLASILPACA 250
R+ VSW + S Y +NK+ L LF +M+ + D + P+ VT L ACA
Sbjct: 176 -------KRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACA 228
Query: 251 NLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWN 310
NLGAL+ G++V + +NG L +SN ++ MY++CG +D A++VF + RN+ SW
Sbjct: 229 NLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRE-RNVVSWT 287
Query: 311 SMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKT- 369
++I GLA++G +A+E +++ML+ G +P++ T GLL AC+H G+V +G F M++
Sbjct: 288 ALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSG 347
Query: 370 DFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAE 429
+F I P L HYGC+VDLLGRA L +AY +I++M MKPDS IW TLLGAC HG+VEL E
Sbjct: 348 EFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGE 407
Query: 430 IAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQL 489
L L+ G+YV+L N Y++ +W+ V +LR +MK +I G S +E G +
Sbjct: 408 RVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTV 467
Query: 490 HKFIVEDRSHPKSNEIFALLDGVYEMFKF 518
H+FIV+D SHP+ EI+ +L + + K
Sbjct: 468 HEFIVDDVSHPRKEEIYKMLAEINQQLKI 496
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 242/454 (53%), Gaps = 4/454 (0%)
Query: 58 AQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXX 117
A+ V P V +N ++ Y + Y + R G N++
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALW-FYKEFRRSGIKFNEFSFAGLLTACV 190
Query: 118 XXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNA 177
+ H + +GF +V + +++D YAK G +E A+R FDEM V+++ W
Sbjct: 191 KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT 250
Query: 178 MMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
+++G+A+ GD++ A +LF MP +N VSWT +I+GY + +AL LF +M + P
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM-IALGVKP 309
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
T +S L A A++ +L G+ + Y + N V +++++MY+K G ++ + RVF
Sbjct: 310 EQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF 369
Query: 298 NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMV 357
+ WN+MI LA HG KAL + D M++ P+ T V +L AC+H G+V
Sbjct: 370 RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLV 429
Query: 358 EKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
E+G F+SM I+P EHY C++DLLGRAG +E I+ MP +PD IW +LG
Sbjct: 430 EEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILG 489
Query: 418 ACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKS 477
C HGN EL + AA+ L L+P + Y++LS+IYA +W+ V KLR VMK ++ K
Sbjct: 490 VCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKE 549
Query: 478 AGHSFLEEGGQLHKFIVEDRS--HPKSNEIFALL 509
S++E ++ F V D S H + EI+ +L
Sbjct: 550 KAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFIL 583
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 154/330 (46%), Gaps = 33/330 (10%)
Query: 125 GQMLHAHFIKSGFA-PDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA 183
G+ +H H +GF P+ + L+ MY K G A ++FD+M +R + +WN M++G+
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
+ G + A +F MP R+VVSW TM+ GY+++ +AL + I N + A
Sbjct: 125 KSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR-RSGIKFNEFSFA 183
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE---- 299
+L AC L++ ++ GF N+ +S ++++ YAKCG ++ A R F+E
Sbjct: 184 GLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK 243
Query: 300 --------------IGSL------------RNLCSWNSMIMGLAVHGKCGKALELYDQML 333
+G + +N SW ++I G G +AL+L+ +M+
Sbjct: 244 DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 334 REGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKL 393
G P+ TF L A + G+ I M N+ P ++D+ ++G L
Sbjct: 304 ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRPNAIVISSLIDMYSKSGSL 362
Query: 394 REAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ V + K D V W T++ A + HG
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISALAQHG 392
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 49/312 (15%)
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFK-NLYVSNAVLEMYAKCGHIDVAWRVFNEI 300
LAS+L C + +L+ G+ + + + GF + N +SN ++ MY KCG A +VF+++
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 301 ------------------GSL------------RNLCSWNSMIMGLAVHGKCGKALELYD 330
G L R++ SWN+M++G A G +AL Y
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 331 QMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRA 390
+ R G ++ +F GLL AC ++ R + + + ++D +
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA-GFLSNVVLSCSIIDAYAKC 227
Query: 391 GKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEP-RNPGNYVIL 449
G++ A M +K D IW TL+ + G++E AAE LF P +NP ++ L
Sbjct: 228 GQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDME----AAEKLFCEMPEKNPVSWTAL 282
Query: 450 SNIYASADQWDGVAKLRKVM-----KGSQIT------KSAGHSFLEEGGQLHKFIVEDRS 498
Y + L + M K Q T SA + L G ++H +++
Sbjct: 283 IAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNV 342
Query: 499 HPKSNEIFALLD 510
P + I +L+D
Sbjct: 343 RPNAIVISSLID 354
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 277/535 (51%), Gaps = 50/535 (9%)
Query: 1 MVLSGTTTFKFSTLRN-PNSKNIGMNQV-KQIHGYTLRTG-IDQTK----TLIEKLLEIP 53
MVL G +F+ P ++ M + K++H Y L+ G +D+ L++
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 54 NLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXX 113
+ + V + + L+N ++ Y G N
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 114 XXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP 173
+ +H +K G D F L+DMY+++G +++A R+F +M R++
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 174 TWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEE 233
TWN TMI+GY ++ +E AL L +M+ E
Sbjct: 473 TWN-------------------------------TMITGYVFSEHHEDALLLLHKMQNLE 501
Query: 234 ----------DIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEM 283
+ PN++TL +ILP+CA L AL G+ + AYA KN ++ V +A+++M
Sbjct: 502 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDM 561
Query: 284 YAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
YAKCG + ++ +VF++I +N+ +WN +IM +HG +A++L M+ +G P++VT
Sbjct: 562 YAKCGCLQMSRKVFDQIPQ-KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVT 620
Query: 344 FVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
F+ + AC+H GMV++G IF MK D+ + P +HY C+VDLLGRAG+++EAY+++ M
Sbjct: 621 FISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
Query: 404 PMKPDSV-IWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGV 462
P + W +LLGA H N+E+ EIAA++L LEP +YV+L+NIY+SA WD
Sbjct: 681 PRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKA 740
Query: 463 AKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
++R+ MK + K G S++E G ++HKF+ D SHP+S ++ L+ ++E +
Sbjct: 741 TEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 795
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 127/245 (51%), Gaps = 11/245 (4%)
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEM-----PVREVPTWNAMMAG 181
+ + I G PD +A ALL A + +EL +++ + V V N ++
Sbjct: 83 LTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNL 142
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+ + GD ++F + RN VSW ++IS +++E AL F R +E++ P++ T
Sbjct: 143 YRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFT 201
Query: 242 LASILPACANLG---ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN 298
L S++ AC+NL L +G++V AY + G N ++ N ++ MY K G + + +
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLG 260
Query: 299 EIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVE 358
G R+L +WN+++ L + + +ALE +M+ EG PD+ T +L AC+H M+
Sbjct: 261 SFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319
Query: 359 KGRHI 363
G+ +
Sbjct: 320 TGKEL 324
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 14/272 (5%)
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
N ++A + + G + + L R++V+W T++S +N+Q +AL +LR E +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE-YLREMVLEGV 298
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFF-KNLYVSNAVLEMYAKCGHIDVAW 294
P+ T++S+LPAC++L L G+ + AYA KNG +N +V +A+++MY C +
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGR 358
Query: 295 RVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLRE-GTTPDDVTFVGLLLACTH 353
RVF+ + R + WN+MI G + + +AL L+ M G + T G++ AC
Sbjct: 359 RVFDGMFD-RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 354 GGMVEKGRHIFKSMKTDFNIIPKLEH----YGCMVDLLGRAGKLREAYEVIQTMPMKPDS 409
G + I F + L+ ++D+ R GK+ A + M + D
Sbjct: 418 SGAFSRKEAIH-----GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DL 471
Query: 410 VIWGTLLGACSFHGNVELAEIAAESLFTLEPR 441
V W T++ F + E A + + LE +
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 291 bits (746), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 240/388 (61%), Gaps = 9/388 (2%)
Query: 125 GQMLHAHFIKS---GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAG 181
G+ +HA+ ++ F D +L+ +Y K G + AR +F++MP +++ +WNA+++G
Sbjct: 305 GKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSG 360
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+ G + A +F+ M +N++SW MISG ++N E+ L LF M+ E P
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK-REGFEPCDYA 419
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
+ + +CA LGA GQ+ A K GF +L NA++ MYAKCG ++ A +VF +
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
L ++ SWN++I L HG +A+++Y++ML++G PD +T + +L AC+H G+V++GR
Sbjct: 480 CLDSV-SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR 538
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
F SM+T + I P +HY ++DLL R+GK +A VI+++P KP + IW LL C
Sbjct: 539 KYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRV 598
Query: 422 HGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHS 481
HGN+EL IAA+ LF L P + G Y++LSN++A+ QW+ VA++RK+M+ + K S
Sbjct: 599 HGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACS 658
Query: 482 FLEEGGQLHKFIVEDRSHPKSNEIFALL 509
++E Q+H F+V+D SHP++ ++ L
Sbjct: 659 WIEMETQVHTFLVDDTSHPEAEAVYIYL 686
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 159/345 (46%), Gaps = 42/345 (12%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGT----LELARRLFDEMPVREVPTWNAMMAGHA 183
HA +KSG + AL+ +Y+K + L AR++FDE+ ++ +W MM G+
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 184 RFGDVDGALELFRLMPSR-NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
+ G D EL M +V++ MISGY Y++AL + RM I + T
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRM-VSSGIELDEFTY 289
Query: 243 ASILPACANLGALEIGQRVEAYA-RKNGF---FKNLYVS--------------------- 277
S++ ACA G L++G++V AY R+ F F N VS
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK 349
Query: 278 -----NAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQM 332
NA+L Y GHI A +F E+ +N+ SW MI GLA +G + L+L+ M
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKE-KNILSWMIMISGLAENGFGEEGLKLFSCM 408
Query: 333 LREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS-MKTDFNIIPKLEHYGCMVDLLGRAG 391
REG P D F G + +C G G+ +K F+ L ++ + + G
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFD--SSLSAGNALITMYAKCG 466
Query: 392 KLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN-VELAEIAAESL 435
+ EA +V +TMP DSV W L+ A HG+ E ++ E L
Sbjct: 467 VVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEML 510
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 161/348 (46%), Gaps = 50/348 (14%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
+ +H + I GF P L+D+Y K L AR+LFDE+ + M++G+
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 185 FGDVDGALELFRLMPS--RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
GD+ A +F P R+ V + MI+G+S N A+ LF +M+ E P+ T
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMK-HEGFKPDNFTF 151
Query: 243 ASILPACANLGALEIGQRVE--AYARKNGFFKNLYVSNAVLEMYAKCGH----IDVAWRV 296
AS+L A L A + Q V+ A A K+G VSNA++ +Y+KC + A +V
Sbjct: 152 ASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKV 210
Query: 297 FNEI-------------GSLRN------------------LCSWNSMIMGLAVHGKCGKA 325
F+EI G ++N L ++N+MI G G +A
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 326 LELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR--HIFKSMKTDFNIIPKLEHY-GC 382
LE+ +M+ G D+ T+ ++ AC G+++ G+ H + + DF+ H+
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFDNS 325
Query: 383 MVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEI 430
+V L + GK EA + + MP K D V W LL G++ A++
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKL 372
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 269/529 (50%), Gaps = 45/529 (8%)
Query: 27 VKQIHGYTLRTGIDQTKTLIE-----KLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYX 81
++ +H LR G+ ++ + LL+ P+ Y+ ++ +S F+ N L++
Sbjct: 45 LRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPD--YSLSIFRNSEERNPFVLNALIRGLT 102
Query: 82 XXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV 141
+RL G P++ G+ LHA +K+ D
Sbjct: 103 ENARFESSVRHFILMLRL-GVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDS 161
Query: 142 FAATALLDMYAKVGTLELARRLFDE----------------------------------- 166
F +L+DMYAK G L+ A ++F+E
Sbjct: 162 FVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRS 221
Query: 167 MPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLF 226
MP R +W+ ++ G+ G+++ A +LF LMP +NVVSWTT+I+G+S+ YE A+ +
Sbjct: 222 MPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTY 281
Query: 227 LRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAK 286
M E+ + PN T+A++L AC+ GAL G R+ Y NG + + A+++MYAK
Sbjct: 282 FEM-LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAK 340
Query: 287 CGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVG 346
CG +D A VF+ + +++ SW +MI G AVHG+ +A++ + QM+ G PD+V F+
Sbjct: 341 CGELDCAATVFSNMNH-KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLA 399
Query: 347 LLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK 406
+L AC + V+ G + F SM+ D+ I P L+HY +VDLLGRAGKL EA+E+++ MP+
Sbjct: 400 VLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPIN 459
Query: 407 PDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLR 466
PD W L AC H AE +++L L+P G+Y+ L +AS V K R
Sbjct: 460 PDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRR 519
Query: 467 KVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEM 515
++ +S G S++E GQL+KF D SH + EI LD + +
Sbjct: 520 LSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISL 568
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 246/466 (52%), Gaps = 35/466 (7%)
Query: 54 NLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXX-XXXXCFSLYSQMRLLGHSPNQYXXXXX 112
+++YA ++ + F +N +++ Y CF Y++M G+ P+ +
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCF--YNEMMQRGNEPDNFTYPCL 138
Query: 113 XXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREV 172
G+ +H K G DVF +L++MY + G +EL+ +F+++ +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 173 PTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECE 232
+W++M++ A G L LFR M S E
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCS-------------------------------E 227
Query: 233 EDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDV 292
++ + S L ACAN GAL +G + + +N N+ V ++++MY KCG +D
Sbjct: 228 TNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDK 287
Query: 293 AWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
A +F ++ NL ++++MI GLA+HG+ AL ++ +M++EG PD V +V +L AC+
Sbjct: 288 ALHIFQKMEKRNNL-TYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACS 346
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIW 412
H G+V++GR +F M + + P EHYGC+VDLLGRAG L EA E IQ++P++ + VIW
Sbjct: 347 HSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIW 406
Query: 413 GTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGS 472
T L C N+EL +IAA+ L L NPG+Y+++SN+Y+ WD VA+ R +
Sbjct: 407 RTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIK 466
Query: 473 QITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFKF 518
+ ++ G S +E G+ H+F+ +DRSHPK EI+ +L + KF
Sbjct: 467 GLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKF 512
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 243/408 (59%), Gaps = 29/408 (7%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +H+ +KSG A + +L+DMY+K G +E A ++ H+R
Sbjct: 501 GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI------------------HSR 542
Query: 185 F---GDVDGALELFRLMPSRNV----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
F +V G +E M ++ + VSW ++ISGY +Q E A LF RM E I P
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM-MEMGITP 601
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
+ T A++L CANL + +G+++ A K ++Y+ + +++MY+KCG + + R+
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS-RLM 660
Query: 298 NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMV 357
E R+ +WN+MI G A HGK +A++L+++M+ E P+ VTF+ +L AC H G++
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 720
Query: 358 EKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
+KG F MK D+ + P+L HY MVD+LG++GK++ A E+I+ MP + D VIW TLLG
Sbjct: 721 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Query: 418 ACSFH-GNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITK 476
C+ H NVE+AE A +L L+P++ Y +LSN+YA A W+ V+ LR+ M+G ++ K
Sbjct: 781 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 840
Query: 477 SAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVY-EMFKFNRSAF 523
G S++E +LH F+V D++HP+ EI+ L +Y EM F+ S+F
Sbjct: 841 EPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSF 888
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 128/248 (51%), Gaps = 3/248 (1%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ HAH I SGF P F LL +Y A +FD+MP+R+V +WN M+ G+++
Sbjct: 67 GKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 126
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
D+ A F +MP R+VVSW +M+SGY +N + K++ +F+ M E I + T A
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG-REGIEFDGRTFAI 185
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
IL C+ L +G ++ + G ++ ++A+L+MYAK + RVF I +
Sbjct: 186 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE-K 244
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
N SW+++I G + AL+ + +M + + +L +C + G +
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 365 K-SMKTDF 371
++K+DF
Sbjct: 305 AHALKSDF 312
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 163/380 (42%), Gaps = 50/380 (13%)
Query: 29 QIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQA--------VLHHSPNSTVFLYNKLLQAY 80
QIHG +R G D LL++ YA+ V P ++ ++ A
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDM----YAKGKRFVESLRVFQGIPEKNSVSWSAII-AG 255
Query: 81 XXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPD 140
+ +M+ + +Q G LHAH +KS FA D
Sbjct: 256 CVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAAD 315
Query: 141 VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPS 200
TA LDMYAK ++ A+ LFD ++NAM
Sbjct: 316 GIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM---------------------- 353
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR 260
I+GYS+ + KAL LF R+ + + ++L+ + ACA + L G +
Sbjct: 354 ---------ITGYSQEEHGFKALLLFHRL-MSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
+ A K+ ++ V+NA ++MY KC + A+RVF+E+ R+ SWN++I +G
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RDAVSWNAIIAAHEQNG 462
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
K + L L+ MLR PD+ TF +L ACT GG + G I S+ + +
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVK--SGMASNSSV 519
Query: 381 GC-MVDLLGRAGKLREAYEV 399
GC ++D+ + G + EA ++
Sbjct: 520 GCSLIDMYSKCGMIEEAEKI 539
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 185/457 (40%), Gaps = 72/457 (15%)
Query: 29 QIHGYTLRT-----GIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
Q+H + L++ GI +T TL + + N+ AQ + +S N YN ++ Y
Sbjct: 302 QLHAHALKSDFAADGIVRTATL-DMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQE 360
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
L+ ++ G ++ G ++ IKS + DV
Sbjct: 361 EHGFKALL-LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
A A +DMY K L A R+FDEM R+
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMR-------------------------------RRDA 448
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
VSW +I+ + +N + + L LF+ M I P+ T SIL AC G+L G + +
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSM-LRSRIEPDEFTFGSILKACTG-GSLGYGMEIHS 506
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI------------------GSLRN 305
K+G N V ++++MY+KCG I+ A ++ + L+
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 306 LC-SWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+C SWNS+I G + + A L+ +M+ G TPD T+ +L C + G+ I
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 626
Query: 365 -----KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGAC 419
K +++D I L VD+ + G L ++ + + ++ D V W ++
Sbjct: 627 AQVIKKELQSDVYICSTL------VDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGY 679
Query: 420 SFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASA 456
+ HG E A E + LE P + +S + A A
Sbjct: 680 AHHGKGEEAIQLFERMI-LENIKPNHVTFISILRACA 715
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 144/295 (48%), Gaps = 37/295 (12%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +H ++ G DV AA+ALLDMYAK +R +
Sbjct: 199 GMQIHGIVVRVGCDTDVVAASALLDMYAK------GKRFVE------------------- 233
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
+L +F+ +P +N VSW+ +I+G +N AL F M+ + ++ AS
Sbjct: 234 ------SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YAS 286
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L +CA L L +G ++ A+A K+ F + V A L+MYAKC ++ A +F+ +L
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL- 345
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
N S+N+MI G + KAL L+ +++ G D+++ G+ AC + +G I+
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 365 K-SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
++K+ ++ + + +D+ G+ L EA+ V M + D+V W ++ A
Sbjct: 406 GLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 65/281 (23%)
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG--- 301
+ CA GALE+G++ A+ +GF +V N +L++Y A VF+++
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 302 ---------------------------SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLR 334
+R++ SWNSM+ G +G+ K++E++ M R
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 335 EGTTPDDVTFVGLLLAC-----THGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGR 389
EG D TF +L C T GM G I + D +++ ++D+ +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHG--IVVRVGCDTDVVAA----SALLDMYAK 227
Query: 390 AGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVIL 449
+ E+ V Q +P K +SV W ++ C + L +A + ++ N G +
Sbjct: 228 GKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQNN---LLSLALKFFKEMQKVNAG---VS 280
Query: 450 SNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLH 490
+IYAS + A S L GGQLH
Sbjct: 281 QSIYASV-----------------LRSCAALSELRLGGQLH 304
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 150/452 (33%), Positives = 243/452 (53%), Gaps = 34/452 (7%)
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
P V YN ++ Y + +M P+ + G
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYED-ALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
+ +H + I+ G DV+ ++L+DMYAK +E + R+F + R
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR--------------- 306
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
DG +SW ++++GY +N +Y +AL LF +M + P AV +S+
Sbjct: 307 ---DG-------------ISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSV 349
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
+PACA+L L +G+++ Y + GF N+++++A+++MY+KCG+I A ++F+ + L
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK 365
+ SW ++IMG A+HG +A+ L+++M R+G P+ V FV +L AC+H G+V++ F
Sbjct: 410 V-SWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFN 468
Query: 366 SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNV 425
SM + + +LEHY + DLLGRAGKL EAY I M ++P +W TLL +CS H N+
Sbjct: 469 SMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNL 528
Query: 426 ELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEE 485
ELAE AE +FT++ N G YV++ N+YAS +W +AKLR M+ + K S++E
Sbjct: 529 ELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEM 588
Query: 486 GGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
+ H F+ DRSHP ++I L V E +
Sbjct: 589 KNKTHGFVSGDRSHPSMDKINEFLKAVMEQME 620
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 168/340 (49%), Gaps = 17/340 (5%)
Query: 94 YSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAK 153
+ +MR G P+ G+ +H ++ G D++ AL++MYAK
Sbjct: 93 FVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAK 152
Query: 154 V---GTLELARRLFDEMPVREVPTWNAMMAGHA---RFGDVDGALELFRLMPSRNVVSWT 207
+ G+ +FDEMP R + + + FG +D +F +MP ++VVS+
Sbjct: 153 LLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYN 211
Query: 208 TMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARK 267
T+I+GY+++ YE AL + M D+ P++ TL+S+LP + + G+ + Y +
Sbjct: 212 TIIAGYAQSGMYEDALRMVREMGTT-DLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIR 270
Query: 268 NGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALE 327
G ++Y+ +++++MYAK I+ + RVF+ + R+ SWNS++ G +G+ +AL
Sbjct: 271 KGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 328 LYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK-SMKTDF--NIIPKLEHYGCMV 384
L+ QM+ P V F ++ AC H + G+ + ++ F NI +V
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA----SALV 385
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
D+ + G ++ A ++ M + D V W ++ + HG+
Sbjct: 386 DMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGH 424
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 146/355 (41%), Gaps = 54/355 (15%)
Query: 8 TFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLH 63
+F S++ S+ + + + K+IHGY +R GID +L++ + + ++ V
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 64 HSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXX 123
+N L+ Y L+ QM P
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNE-ALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 124 XGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA 183
G+ LH + ++ GF ++F A+AL+DMY+K G ++ AR++FD M V + +W A++ GHA
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
G A+ LF M + V PN V
Sbjct: 421 LHGHGHEAVSLFEEMKRQGV--------------------------------KPNQVAFV 448
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYA-------KCGHIDVAWRV 296
++L AC+++G ++ EA+ N K +Y N LE YA + G ++ A+
Sbjct: 449 AVLTACSHVGLVD-----EAWGYFNSMTK-VYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 297 FNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLAC 351
+++ W++++ +VH K LEL +++ + T D +L C
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVH----KNLELAEKVAEKIFTVDSENMGAYVLMC 553
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/495 (34%), Positives = 262/495 (52%), Gaps = 50/495 (10%)
Query: 3 LSGTTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPN---LHYAQ 59
++ +T K N SK + +KQIH + G+ + KLL + + L YA
Sbjct: 1 MTSPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYAL 60
Query: 60 AVLHHSPNSTVFLYNKLLQAYXXXXXXXXX--CFSLYSQM---RLLGHSPNQYXXXXXXX 114
++L PN +VFLYN L+ + FSLY Q+ R PN++
Sbjct: 61 SILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFK 120
Query: 115 XXXXXXX-XXXGQMLHAHFIK--SGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVRE 171
G+ LHAH +K D F AL+ YA G L AR LF+ +RE
Sbjct: 121 ASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFER--IRE 178
Query: 172 VPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQY---EKALGLFLR 228
++ +W T+++ Y+ +++ E+ L LF+R
Sbjct: 179 -----------------------------PDLATWNTLLAAYANSEEIDSDEEVLLLFMR 209
Query: 229 MECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCG 288
M+ + PN ++L +++ +CANLG G Y KN N +V +++++Y+KCG
Sbjct: 210 MQ----VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCG 265
Query: 289 HIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLL 348
+ A +VF+E+ S R++ +N+MI GLAVHG + +ELY ++ +G PD TFV +
Sbjct: 266 CLSFARKVFDEM-SQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTI 324
Query: 349 LACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPD 408
AC+H G+V++G IF SMK + I PK+EHYGC+VDLLGR+G+L EA E I+ MP+KP+
Sbjct: 325 SACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPN 384
Query: 409 SVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKV 468
+ +W + LG+ HG+ E EIA + L LE N GNYV+LSNIYA ++W V K R++
Sbjct: 385 ATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTREL 444
Query: 469 MKGSQITKSAGHSFL 483
MK ++ KS G S L
Sbjct: 445 MKDHRVNKSPGISTL 459
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 260/488 (53%), Gaps = 40/488 (8%)
Query: 29 QIHGYTLRTGIDQ----TKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
Q+H YT++ + T +LI+ + L A+ V + V L+N +++ Y
Sbjct: 371 QVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLG 430
Query: 85 XX--XXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVF 142
+++ MR P+ + +H K G D+F
Sbjct: 431 TQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIF 490
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRN 202
A +AL+D+Y+ L+ +R +FDEM V+++
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFDEMKVKDL------------------------------ 520
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
V W +M +GY + + E+AL LFL ++ + P+ T A+++ A NL ++++GQ
Sbjct: 521 -VIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC 322
K G N Y++NA+L+MYAKCG + A + F+ S R++ WNS+I A HG+
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAAS-RDVVCWNSVISSYANHGEG 637
Query: 323 GKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGC 382
KAL++ ++M+ EG P+ +TFVG+L AC+H G+VE G F+ M F I P+ EHY C
Sbjct: 638 KKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVC 696
Query: 383 MVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRN 442
MV LLGRAG+L +A E+I+ MP KP +++W +LL C+ GNVELAE AAE +P++
Sbjct: 697 MVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKD 756
Query: 443 PGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKS 502
G++ +LSNIYAS W K+R+ MK + K G S++ ++H F+ +D+SH K+
Sbjct: 757 SGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKA 816
Query: 503 NEIFALLD 510
N+I+ +LD
Sbjct: 817 NQIYEVLD 824
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 192/438 (43%), Gaps = 51/438 (11%)
Query: 28 KQIHGYTLRTGIDQTKTL----IEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
KQIH + LR G++ +L I+ ++ + A + + PN + + LL Y
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
L++ M G P+ Y G +HA+ IK+ D +
Sbjct: 329 ALHKE-AMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYV 387
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG---DVDGALELFRLMPS 200
+L+DMYAK L AR++FD +V +NAM+ G++R G ++ AL +FR M
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR 260
R I P+ +T S+L A A+L +L + ++
Sbjct: 448 RL--------------------------------IRPSLLTFVSLLRASASLTSLGLSKQ 475
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
+ K G +++ +A++++Y+ C + + VF+E+ +++L WNSM G
Sbjct: 476 IHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAGYVQQS 534
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF-KSMKTDFNIIPKLEH 379
+ +AL L+ ++ PD+ TF ++ A + V+ G+ + +K P + +
Sbjct: 535 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFT-- 437
++D+ + G +A++ + + D V W +++ + + HG + A E + +
Sbjct: 595 --ALLDMYAKCGSPEDAHKAFDSAASR-DVVCWNSVISSYANHGEGKKALQMLEKMMSEG 651
Query: 438 LEPRNPGNYVILSNIYAS 455
+EP NY+ + ++
Sbjct: 652 IEP----NYITFVGVLSA 665
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 141/293 (48%), Gaps = 38/293 (12%)
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG 186
++H I G D + + L+++Y++ G + AR++F++M
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKM------------------- 105
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
P RN+VSW+TM+S + + YE++L +FL PN L+S +
Sbjct: 106 ------------PERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153
Query: 247 PACANL---GALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
AC+ L G + Q ++++ K+GF +++YV +++ Y K G+ID A VF+ +
Sbjct: 154 QACSGLDGRGRWMVFQ-LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE- 211
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
++ +W +MI G G+ +L+L+ Q++ + PD +L AC+ +E G+ I
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI 271
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
+ + + ++D + G++ A+++ MP K + + W TLL
Sbjct: 272 HAHI-LRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK-NIISWTTLL 322
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 41/330 (12%)
Query: 30 IHGYTLRTGIDQTKTLIEKLLEIPN----LHYAQAVLHHSPNSTVFLYNKLLQAYXXXXX 85
+HG + G++ L L+ + + + YA+ V P + ++ ++ A
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 86 XXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQM--LHAHFIKSGFAPDVFA 143
R SPN+Y + L + +KSGF DV+
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELF-RLMPSRN 202
T L+D Y K G ++ AR +FD +P + TW M++G + G +L+LF +LM
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM---- 241
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
E++++P+ L+++L AC+ L LE G+++
Sbjct: 242 -----------------------------EDNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC 322
A+ + G + + N +++ Y KCG + A ++FN + + +N+ SW +++ G +
Sbjct: 273 AHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN-KNIISWTTLLSGYKQNALH 331
Query: 323 GKALELYDQMLREGTTPDDVTFVGLLLACT 352
+A+EL+ M + G PD +L +C
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 129/360 (35%), Gaps = 72/360 (20%)
Query: 7 TTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGID----QTKTLIEKLLEIPNLHYAQAVL 62
+ F +L ++ + KQIHG + G++ LI+ L ++ V
Sbjct: 453 SLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVF 512
Query: 63 HHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXX 122
+ ++N + Y +L+ +++L P+++
Sbjct: 513 DEMKVKDLVIWNSMFAGYVQQSENEE-ALNLFLELQLSRERPDEFTFANMVTAAGNLASV 571
Query: 123 XXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
GQ H +K G + + ALLDMYAK G+ E A + FD R+V WN++++ +
Sbjct: 572 QLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSY 631
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
A G+ AL++ M S E I PN +T
Sbjct: 632 ANHGEGKKALQMLEKMMS--------------------------------EGIEPNYITF 659
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+L AC++ G +E G + ++ R E +
Sbjct: 660 VGVLSACSHAGLVEDGLK----------------------------QFELMLRFGIEPET 691
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
+C M+ L G+ KA EL ++M T P + + LL C G VE H
Sbjct: 692 EHYVC----MVSLLGRAGRLNKARELIEKM---PTKPAAIVWRSLLSGCAKAGNVELAEH 744
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 228/386 (59%), Gaps = 34/386 (8%)
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGT--LELARRLFDEMPVREVPTWNAMMAGHA 183
+ +H+ IK GF V LLD YAK G + +AR++FD++ ++ ++N++M+ +A
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
+ G + A E+FR + VV++ NA+TL+
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTF-------------------------------NAITLS 291
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
++L A ++ GAL IG+ + + G ++ V ++++MY KCG ++ A + F+ + +
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN- 350
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
+N+ SW +MI G +HG KALEL+ M+ G P+ +TFV +L AC+H G+ +G
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRW 410
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
F +MK F + P LEHYGCMVDLLGRAG L++AY++IQ M MKPDS+IW +LL AC H
Sbjct: 411 FNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHK 470
Query: 424 NVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
NVELAEI+ LF L+ N G Y++LS+IYA A +W V ++R +MK + K G S L
Sbjct: 471 NVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLL 530
Query: 484 EEGGQLHKFIVEDRSHPKSNEIFALL 509
E G++H F++ D HP+ +I+ L
Sbjct: 531 ELNGEVHVFLIGDEEHPQREKIYEFL 556
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 156/346 (45%), Gaps = 48/346 (13%)
Query: 94 YSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAK 153
+S MR L P + G+ H G+ D+F ++AL+ MY+
Sbjct: 64 FSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYST 123
Query: 154 VGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGY 213
G LE AR++FDE+ P RN+VSWT+MI GY
Sbjct: 124 CGKLEDARKVFDEI-------------------------------PKRNIVSWTSMIRGY 152
Query: 214 SKNKQYEKALGLFLRMECEED-----IMPNAVTLASILPACANLGALEIGQRVEAYARKN 268
N A+ LF + +E+ + +++ L S++ AC+ + A + + + ++ K
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR 212
Query: 269 GFFKNLYVSNAVLEMYAKCGH--IDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKAL 326
GF + + V N +L+ YAK G + VA ++F++I ++ S+NS++ A G +A
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAF 271
Query: 327 ELYDQMLREG-TTPDDVTFVGLLLACTHGGMVEKGRHIFKS---MKTDFNIIPKLEHYGC 382
E++ ++++ T + +T +LLA +H G + G+ I M + ++I
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS---- 327
Query: 383 MVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
++D+ + G++ A + M K + W ++ HG+ A
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGHAAKA 372
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 196 RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL 255
R + +V SW ++I+ +++ +AL F M + + P + + AC++L +
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMR-KLSLYPTRSSFPCAIKACSSLFDI 92
Query: 256 EIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMG 315
G++ A G+ +++VS+A++ MY+ CG ++ A +VF+EI RN+ SW SMI G
Sbjct: 93 FSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMIRG 151
Query: 316 LAVHGKCGKALELYDQMLREGTTPDDVTF------VGLLLACT 352
++G A+ L+ +L + DD F V ++ AC+
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 33/196 (16%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H I+ G DV T+++DMY K G +E AR+ FD M + V +W AM+AG+
Sbjct: 306 GKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGM 365
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G ALELF M + + PN +T S
Sbjct: 366 HGHAAKALELFPAM--------------------------------IDSGVRPNYITFVS 393
Query: 245 ILPACANLGALEIGQR-VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
+L AC++ G G R A + G L ++++ + G + A+ + +
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 304 RNLCSWNSMIMGLAVH 319
+ W+S++ +H
Sbjct: 454 PDSIIWSSLLAACRIH 469
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 221/356 (62%), Gaps = 1/356 (0%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
D+ + +++D Y K G +E A+ LFD MP R+V TW M+ G+A+ G V A LF MP
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
R+VV++ +M++GY +NK + +AL +F ME E ++P+ TL +LPA A LG L
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
+ Y + F+ + A+++MY+KCG I A VF I + +++ WN+MI GLA+H
Sbjct: 371 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIEN-KSIDHWNAMIGGLAIH 429
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G A ++ Q+ R PDD+TFVG+L AC+H G+V++G F+ M+ I P+L+H
Sbjct: 430 GLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQH 489
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
YGCMVD+L R+G + A +I+ MP++P+ VIW T L ACS H E E+ A+ L
Sbjct: 490 YGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQA 549
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVE 495
NP +YV+LSN+YAS W V ++R +MK +I K G S++E G++H+F V+
Sbjct: 550 GYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFVD 605
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 201/439 (45%), Gaps = 45/439 (10%)
Query: 25 NQVKQIHGYTLRTGIDQTKTLIEKLL------EIPNL-HYAQAVLHHSPNSTV------- 70
+ V QIHG ++TGI + L +++ P L +A+ V H +
Sbjct: 26 DDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVED 85
Query: 71 -FLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLH 129
FL+N +++++ L + G S +++ G +H
Sbjct: 86 PFLWNAVIKSHSHGKDPRQALLLLCLMLEN-GVSVDKFSLSLVLKACSRLGFVKGGMQIH 144
Query: 130 AHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVD 189
K+G D+F L+ +Y K G L L+R++FD MP R+ ++N+M+ G+ + G +
Sbjct: 145 GFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 204
Query: 190 GALELFRLMP--SRNVVSWTTMISGYSKNKQ-YEKALGLFLRMECEEDIMPNAVTLASIL 246
A ELF LMP +N++SW +MISGY++ + A LF M E+D+ ++ S++
Sbjct: 205 SARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMP-EKDL----ISWNSMI 259
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
G +E + + + +++ +++ YAK G + A +F+++ R++
Sbjct: 260 DGYVKHGRIEDAKGLFDVMPR----RDVVTWATMIDGYAKLGFVHHAKTLFDQMPH-RDV 314
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREG-TTPDDVTFVGLLLACTHGGMVEKGRHIFK 365
++NSM+ G + +ALE++ M +E PDD T V +L A G + K
Sbjct: 315 VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLS------K 368
Query: 366 SMKTDFNIIPKLEHYG-----CMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACS 420
++ I+ K + G ++D+ + G ++ A V + + K W ++G +
Sbjct: 369 AIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH-WNAMIGGLA 427
Query: 421 FHGNVELAEIAAESLFTLE 439
HG L E A + L +E
Sbjct: 428 IHG---LGESAFDMLLQIE 443
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/573 (28%), Positives = 278/573 (48%), Gaps = 80/573 (13%)
Query: 23 GMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQ 78
G + +QIHGY LR G++ ++ L+ + L ++ V + + + +N +L
Sbjct: 104 GFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163
Query: 79 AYX----------------------------------XXXXXXXXCFSLYSQMRLLGHSP 104
+Y ++ +M++ G P
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223
Query: 105 NQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLF 164
+ G+ +H + +++ DV+ T L+DMY K G L AR +F
Sbjct: 224 STSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 165 DEMPVREVP-----------------------------------TWNAMMAGHARFGDVD 189
D M + + TWN++ +G+A G +
Sbjct: 284 DMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPE 343
Query: 190 GALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
AL++ M + NVVSWT + SG SKN + AL +F++M+ EE + PNA T++++
Sbjct: 344 KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ-EEGVGPNAATMSTL 402
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
L L L G+ V + + + YV+ A+++MY K G + A +F I + ++
Sbjct: 403 LKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKN-KS 461
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK 365
L SWN M+MG A+ G+ + + + ML G PD +TF +L C + G+V++G F
Sbjct: 462 LASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFD 521
Query: 366 SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNV 425
M++ + IIP +EH CMVDLLGR+G L EA++ IQTM +KPD+ IWG L +C H ++
Sbjct: 522 LMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDL 581
Query: 426 ELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEE 485
ELAEIA + L LEP N NY+++ N+Y++ ++W+ V ++R +M+ +++ S+++
Sbjct: 582 ELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQI 641
Query: 486 GGQLHKFIVEDRSHPKSNEI-FALLDGVYEMFK 517
+H F E ++HP +I F L V EM K
Sbjct: 642 DQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKK 674
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 186/399 (46%), Gaps = 16/399 (4%)
Query: 30 IHGYTLRTGIDQTKTLIEKLL-----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
IHG ++ G+D + T + +L +A + P +N+++
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV-NLRS 67
Query: 85 XXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAA 144
L+ +M+ G G+ +H + ++ G +V
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMC 127
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP----S 200
+L+ MY++ G LEL+R++F+ M R + +WN++++ + + G VD A+ L M
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR 260
++V+W +++SGY+ + A+ + RM+ + P+ +++S+L A A G L++G+
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQI-AGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
+ Y +N + ++YV +++MY K G++ A VF+ + + +N+ +WNS++ GL+
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA-KNIVAWNSLVSGLSYAC 305
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
A L +M +EG PD +T+ L G EK + MK + + P + +
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK-EKGVAPNVVSW 364
Query: 381 GCMVDLLGRAGKLREAYEV---IQTMPMKPDSVIWGTLL 416
+ + G R A +V +Q + P++ TLL
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 227/380 (59%), Gaps = 35/380 (9%)
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
+MLH IK G DVF +AL+D++AK+G E
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPE--------------------------- 211
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
AL +F M + + + W ++I G+++N + + AL LF RM+ + TL S+
Sbjct: 212 ----DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK-RAGFIAEQATLTSV 266
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
L AC L LE+G + + K + ++L ++NA+++MY KCG ++ A RVFN++ R+
Sbjct: 267 LRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKE-RD 323
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK 365
+ +W++MI GLA +G +AL+L+++M GT P+ +T VG+L AC+H G++E G + F+
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 366 SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNV 425
SMK + I P EHYGCM+DLLG+AGKL +A +++ M +PD+V W TLLGAC N+
Sbjct: 384 SMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 443
Query: 426 ELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEE 485
LAE AA+ + L+P + G Y +LSNIYA++ +WD V ++R M+ I K G S++E
Sbjct: 444 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503
Query: 486 GGQLHKFIVEDRSHPKSNEI 505
Q+H FI+ D SHP+ E+
Sbjct: 504 NKQIHAFIIGDNSHPQIVEV 523
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 42/300 (14%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G ++ H +G P +F L++MY K L A +LFD+
Sbjct: 80 GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQ------------------ 121
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
MP RNV+SWTTMIS YSK K ++KAL L + M +++ PN T +S
Sbjct: 122 -------------MPQRNVISWTTMISAYSKCKIHQKALELLVLM-LRDNVRPNVYTYSS 167
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L +C + + + + K G +++V +A+++++AK G + A VF+E+ +
Sbjct: 168 VLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT-G 223
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI- 363
+ WNS+I G A + + ALEL+ +M R G + T +L ACT ++E G
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+K D ++I +VD+ + G L +A V M + D + W T++ + +G
Sbjct: 284 VHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMKER-DVITWSTMISGLAQNG 338
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 129/313 (41%), Gaps = 56/313 (17%)
Query: 12 STLRNPNSKNIGMNQVKQIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHHSPN 67
S LR+ N GM+ V+ +H ++ G++ LI+ ++ A +V
Sbjct: 167 SVLRSCN----GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 68 STVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQM 127
++N ++ + L+ +M+ G Q G
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVA-LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
H H +K + D+ AL+DMY K G+LE A R+F++M R+V TW+ M++G A+
Sbjct: 282 AHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ--- 336
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
+GYS ++AL LF RM+ PN +T+ +L
Sbjct: 337 -----------------------NGYS-----QEALKLFERMK-SSGTKPNYITIVGVLF 367
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMY-------AKCGHIDVAWRVFNEI 300
AC++ G LE G Y R K LY + V E Y K G +D A ++ NE+
Sbjct: 368 ACSHAGLLEDGW---YYFRS---MKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
Query: 301 GSLRNLCSWNSMI 313
+ +W +++
Sbjct: 422 ECEPDAVTWRTLL 434
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 100/202 (49%), Gaps = 28/202 (13%)
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
++ T + ++ C + A+ G + + NG +++ N ++ MY K ++ A ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 298 NEIGSLRNLCSWNSMIMGLAVHGKCG---KALELYDQMLREGTTPDDVTFVGLLLACT-- 352
+++ RN+ SW +MI + + KC KALEL MLR+ P+ T+ +L +C
Sbjct: 120 DQMPQ-RNVISWTTMI---SAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 353 ------HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK 406
H G++++G +++D + L +D+ + G+ +A V M +
Sbjct: 176 SDVRMLHCGIIKEG------LESDVFVRSAL------IDVFAKLGEPEDALSVFDEM-VT 222
Query: 407 PDSVIWGTLLGACSFHGNVELA 428
D+++W +++G + + ++A
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVA 244
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 281 bits (720), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 262/493 (53%), Gaps = 16/493 (3%)
Query: 28 KQIHGYTLRTGID----QTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXX- 82
+++HGY ++ G++ + +L+ + + V P V +N L+ +Y
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 83 -XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV 141
F SQ L ++ G+ ++ F+ + F V
Sbjct: 126 GRFEDAIGVFKRMSQESNLKF--DEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSV 182
Query: 142 FAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
AL+DM+ K G L+ AR +FD M + V W +M+ G+ G +D A LF P +
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
+VV WT M++GY + ++++AL LF M+ I P+ L S+L CA GALE G+ +
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTA-GIRPDNFVLVSLLTGCAQTGALEQGKWI 301
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
Y +N + V A+++MYAKCG I+ A VF EI R+ SW S+I GLA++G
Sbjct: 302 HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE-RDTASWTSLIYGLAMNGM 360
Query: 322 CGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYG 381
G+AL+LY +M G D +TFV +L AC HGG V +GR IF SM N+ PK EH
Sbjct: 361 SGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS 420
Query: 382 CMVDLLGRAGKLREAYEVIQTMPMKPDSV---IWGTLLGACSFHGNVELAEIAAESLFTL 438
C++DLL RAG L EA E+I M + D ++ +LL A +GNV++AE AE L +
Sbjct: 421 CLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKV 480
Query: 439 EPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDR- 497
E + + +L+++YASA++W+ V +R+ MK I K G S +E G H+FIV D
Sbjct: 481 EVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDL 540
Query: 498 -SHPKSNEIFALL 509
SHPK +EI ++L
Sbjct: 541 LSHPKMDEINSML 553
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 170/386 (44%), Gaps = 67/386 (17%)
Query: 69 TVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQML 128
++ +YNK+L++ +L+ ++R G P+ + G+ +
Sbjct: 10 SLLMYNKMLKSLADGKSFTKV-LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 129 HAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDV 188
H + +K+G D + + +L+ MYA +G +E+ ++FDEMP R+V +WN
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNG----------- 117
Query: 189 DGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA 248
+IS Y N ++E A+G+F RM E ++ + T+ S L A
Sbjct: 118 --------------------LISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSA 157
Query: 249 CANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCS 308
C+ L LEIG+R+ + F ++ + NA+++M+ KCG +D A VF+ + +N+
Sbjct: 158 CSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRD-KNVKC 215
Query: 309 WNSMIMGLAVHGKC-------------------------------GKALELYDQMLREGT 337
W SM+ G G+ +ALEL+ M G
Sbjct: 216 WTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGI 275
Query: 338 TPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAY 397
PD+ V LL C G +E+G+ I + + + K+ +VD+ + G + A
Sbjct: 276 RPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA-LVDMYAKCGCIETAL 334
Query: 398 EVIQTMPMKPDSVIWGTLLGACSFHG 423
EV + + D+ W +L+ + +G
Sbjct: 335 EVFYEIKER-DTASWTSLIYGLAMNG 359
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 281 bits (720), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 173/584 (29%), Positives = 285/584 (48%), Gaps = 77/584 (13%)
Query: 1 MVLSGTTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLE----IPNLH 56
+V + T K ++ S +N +KQIH + + L+ LL+
Sbjct: 3 IVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTK 62
Query: 57 YAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXX 116
Y+ + H+ +FLYN L+ + L+ +R G + +
Sbjct: 63 YSYLLFSHTQFPNIFLYNSLINGFVNNHLFHET-LDLFLSIRKHGLYLHGFTFPLVLKAC 121
Query: 117 XXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWN 176
G LH+ +K GF DV A T+LL +Y+ G L A +LFDE+P R V TW
Sbjct: 122 TRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWT 181
Query: 177 AMMAGHARFGDVDGALELFRLMP------------------------------------- 199
A+ +G+ G A++LF+ M
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM 241
Query: 200 --SRNVVSWTTMISGYSKNKQYEKA-------------------------------LGLF 226
+N TT+++ Y+K + EKA + LF
Sbjct: 242 EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF 301
Query: 227 LRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAK 286
L+M +E++ P+ ++ L +CA+LGAL++G+ + ++ F NL+++NA+++MYAK
Sbjct: 302 LQM-LQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 360
Query: 287 CGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVG 346
CG + + VF E+ +++ N+ I GLA +G + ++ Q + G +PD TF+G
Sbjct: 361 CGAMARGFEVFKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 347 LLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK 406
LL C H G+++ G F ++ + + +EHYGCMVDL GRAG L +AY +I MPM+
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 407 PDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLR 466
P++++WG LL C + +LAE + L LEP N GNYV LSNIY+ +WD A++R
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVR 539
Query: 467 KVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
+M + K G+S++E G++H+F+ +D+SHP S++I+A L+
Sbjct: 540 DMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLE 583
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 174/507 (34%), Positives = 256/507 (50%), Gaps = 41/507 (8%)
Query: 13 TLRNPNSKNIGMNQVKQIHGYTLRTGIDQ----TKTLIEKLLEIPNLHYAQAVLH--HSP 66
TL S + ++ +H +R G+D T I + +L A+ V
Sbjct: 158 TLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRG 217
Query: 67 NSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQ 126
+ TV +N + +AY F LY M P+ G+
Sbjct: 218 DRTVVSWNSMFKAYSVFGEAFDA-FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG 186
++H+H I G D+ A + MY+K AR LFD
Sbjct: 277 LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD--------------------- 315
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
+M SR VSWT MISGY++ ++AL LF M + P+ VTL S++
Sbjct: 316 ----------IMTSRTCVSWTVMISGYAEKGDMDEALALFHAM-IKSGEKPDLVTLLSLI 364
Query: 247 PACANLGALEIGQRVEAYARKNGFFK-NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
C G+LE G+ ++A A G + N+ + NA+++MY+KCG I A +F+ +
Sbjct: 365 SGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE-KT 423
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK 365
+ +W +MI G A++G +AL+L+ +M+ P+ +TF+ +L AC H G +EKG F
Sbjct: 424 VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFH 483
Query: 366 SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNV 425
MK +NI P L+HY CMVDLLGR GKL EA E+I+ M KPD+ IWG LL AC H NV
Sbjct: 484 IMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNV 543
Query: 426 ELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEE 485
++AE AAESLF LEP+ YV ++NIYA+A WDG A++R +MK I K G S ++
Sbjct: 544 KIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQV 603
Query: 486 GGQLHKFIVEDRSHPKSNEIFALLDGV 512
G+ H F V + H ++ I+ L+G+
Sbjct: 604 NGKNHSFTVGEHGHVENEVIYFTLNGL 630
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 153/368 (41%), Gaps = 66/368 (17%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
L+ +M+ G PN + +M+HAH IKS F DVF TA +DM+
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 153 KVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISG 212
K + VD A ++F MP R+ +W M+SG
Sbjct: 99 KCNS-------------------------------VDYAAKVFERMPERDATTWNAMLSG 127
Query: 213 YSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFK 272
+ ++ +KA LF M E I P++VT+ +++ + + +L++ + + A + G
Sbjct: 128 FCQSGHTDKAFSLFREMRLNE-ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 273 NLYVSNAVLEMYAKCGHIDVAWRVFNEIG-SLRNLCSWNSMIMGLAVHGKCGKALELYDQ 331
+ V+N + Y KCG +D A VF I R + SWNSM +V G+ A LY
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCL 246
Query: 332 MLREGTTPDDVTFVGLLLACTHGGMVEKGRHI------------FKSMKTDFNIIPKLEH 379
MLRE PD TF+ L +C + + +GR I +++ T ++ K E
Sbjct: 247 MLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSED 306
Query: 380 ------------------YGCMVDLLGRAGKLREAYEVIQTMPM---KPDSVIWGTLLGA 418
+ M+ G + EA + M KPD V +L+
Sbjct: 307 TCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISG 366
Query: 419 CSFHGNVE 426
C G++E
Sbjct: 367 CGKFGSLE 374
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 10/234 (4%)
Query: 194 LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
L+R+ +V +W I ++L LF M+ PN T + ACA L
Sbjct: 8 LYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMK-RGGFEPNNFTFPFVAKACARLA 66
Query: 254 ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
+ + V A+ K+ F+ +++V A ++M+ KC +D A +VF + R+ +WN+M+
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPE-RDATTWNAML 125
Query: 314 MGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKT---D 370
G G KA L+ +M TPD VT + L+ + + EK + ++M
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIR 181
Query: 371 FNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVI-WGTLLGACSFHG 423
+ ++ + G+ G L A V + + +V+ W ++ A S G
Sbjct: 182 LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 281 bits (719), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 268/507 (52%), Gaps = 40/507 (7%)
Query: 19 SKNIGMNQVKQIHGYTLRTGIDQTK---TLIEKLLEIP---NLHYAQAVLHHSPNSTVFL 72
SK + ++ QI Y +++ I+ LI E P ++ YA+ + + +
Sbjct: 37 SKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVI 96
Query: 73 YNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHF 132
+N + + Y FSL+ ++ G P+ Y G+ LH
Sbjct: 97 FNSMARGYSRFTNPLEV-FSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLS 155
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGAL 192
+K G +V+ L++MY + ++ AR +FD +
Sbjct: 156 MKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI------------------------- 190
Query: 193 ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANL 252
+ P VV + MI+GY++ + +AL LF M+ + + PN +TL S+L +CA L
Sbjct: 191 ----VEPC--VVCYNAMITGYARRNRPNEALSLFREMQGKY-LKPNEITLLSVLSSCALL 243
Query: 253 GALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSM 312
G+L++G+ + YA+K+ F K + V+ A+++M+AKCG +D A +F ++ ++ +W++M
Sbjct: 244 GSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM-RYKDTQAWSAM 302
Query: 313 IMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFN 372
I+ A HGK K++ ++++M E PD++TF+GLL AC+H G VE+GR F M + F
Sbjct: 303 IVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFG 362
Query: 373 IIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAA 432
I+P ++HYG MVDLL RAG L +AYE I +P+ P ++W LL ACS H N++LAE +
Sbjct: 363 IVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVS 422
Query: 433 ESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKF 492
E +F L+ + G+YVILSN+YA +W+ V LRKVMK + K G S +E +H+F
Sbjct: 423 ERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEF 482
Query: 493 IVEDRSHPKSNEIFALLDGVYEMFKFN 519
D + ++ LD + + K +
Sbjct: 483 FSGDGVKSATTKLHRALDEMVKELKLS 509
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 229/367 (62%), Gaps = 3/367 (0%)
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
T++L Y G +E A F+ MP++ V NAM+ G G++ A +F LM R+
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
+W MI Y + +AL LF +M+ ++ + P+ +L SIL CA L +L+ G++V A+
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQ-KQGVRPSFPSLISILSVCATLASLQYGRQVHAH 356
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
+ F ++YV++ ++ MY KCG + A VF+ S +++ WNS+I G A HG +
Sbjct: 357 LVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS-KDIIMWNSIISGYASHGLGEE 415
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMV 384
AL+++ +M GT P+ VT + +L AC++ G +E+G IF+SM++ F + P +EHY C V
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTV 475
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPG 444
D+LGRAG++ +A E+I++M +KPD+ +WG LLGAC H ++LAE+AA+ LF EP N G
Sbjct: 476 DMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAG 535
Query: 445 NYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVED-RSHPKSN 503
YV+LS+I AS +W VA +RK M+ + ++K G S++E G ++H F ++HP+
Sbjct: 536 TYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQA 595
Query: 504 EIFALLD 510
I +L+
Sbjct: 596 MILMMLE 602
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 140/313 (44%), Gaps = 34/313 (10%)
Query: 146 ALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVS 205
+++ Y G + AR+LFDEM R V +WN +++G+ + + A +F LMP RNVVS
Sbjct: 53 SIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVS 112
Query: 206 WTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYA 265
WT M+ GY + +A LF RM N V+ + + G ++ +++
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMP-----ERNEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 266 RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKA 325
K++ S ++ + G +D A +F+E+ RN+ +W +MI G + + A
Sbjct: 168 P----VKDVVASTNMIGGLCREGRVDEARLIFDEMRE-RNVVTWTTMITGYRQNNRVDVA 222
Query: 326 LELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGC--M 383
+L++ M +V++ +LL T G +E F+ ++P C M
Sbjct: 223 RKLFEVM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFE-------VMPMKPVIACNAM 271
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFT------ 437
+ G G++ +A V M + D+ W ++ A G E+ A LF
Sbjct: 272 IVGFGEVGEISKARRVFDLMEDR-DNATWRGMIKAYERKG----FELEALDLFAQMQKQG 326
Query: 438 LEPRNPGNYVILS 450
+ P P ILS
Sbjct: 327 VRPSFPSLISILS 339
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 127/292 (43%), Gaps = 55/292 (18%)
Query: 152 AKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMIS 211
+++G + AR+ FD + + + +WN++++G+ G A +LF M RNVVSW ++S
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87
Query: 212 GYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFF 271
GY KN+ +A +F ++MP
Sbjct: 88 GYIKNRMIVEARNVF-------ELMPE--------------------------------- 107
Query: 272 KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQ 331
+N+ A+++ Y + G + A +F + RN SW M GL G+ KA +LYD
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPE-RNEVSWTVMFGGLIDDGRIDKARKLYDM 166
Query: 332 MLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAG 391
M D V ++ G V++ R IF M+ + N++ + M+ +
Sbjct: 167 M----PVKDVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVT----WTTMITGYRQNN 217
Query: 392 KLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
++ A ++ + MP K + V W ++L + G +E AE F + P P
Sbjct: 218 RVDVARKLFEVMPEKTE-VSWTSMLLGYTLSGRIE----DAEEFFEVMPMKP 264
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 18/235 (7%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
+V + L+ Y K + AR +F+ MP R V +W AM+ G+ + G V A LF MP
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP--NAVTLASILPACANLGALEI 257
RN VSWT M G + + +KA L+ D+MP + V +++ G ++
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLY-------DMMPVKDVVASTNMIGGLCREGRVDE 190
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLA 317
+ + R+ +N+ ++ Y + +DVA ++F E+ + SW SM++G
Sbjct: 191 ARLIFDEMRE----RNVVTWTTMITGYRQNNRVDVARKLF-EVMPEKTEVSWTSMLLGYT 245
Query: 318 VHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFN 372
+ G+ A E ++ M + + VG G + K R +F M+ N
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIACNAMIVGF----GEVGEISKARRVFDLMEDRDN 296
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
L++QM+ G P+ G+ +HAH ++ F DV+ A+ L+ M
Sbjct: 316 LDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTM 375
Query: 151 YAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMI 210
Y K G L A+ +FD +++ WN++++G+A G + AL++F MPS
Sbjct: 376 YVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS---------- 425
Query: 211 SGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV-EAYARKNG 269
SG MPN VTL +IL AC+ G LE G + E+ K
Sbjct: 426 SG----------------------TMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463
Query: 270 FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
+ + ++M + G +D A + + + W +++ H +
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR 515
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 230/368 (62%), Gaps = 4/368 (1%)
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
T++L Y + G +E A LF+ MPV+ V NAM++G + G++ A +F M RN
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
SW T+I + +N +AL LF+ M+ ++ + P TL SIL CA+L +L G++V A
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQ-KQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
+ F ++YV++ ++ MY KCG + + +F+ S +++ WNS+I G A HG +
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS-KDIIMWNSIISGYASHGLGEE 415
Query: 325 ALELYDQMLREGTT-PDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
AL+++ +M G+T P++VTFV L AC++ GMVE+G I++SM++ F + P HY CM
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
VD+LGRAG+ EA E+I +M ++PD+ +WG+LLGAC H +++AE A+ L +EP N
Sbjct: 476 VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENS 535
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVED-RSHPKS 502
G Y++LSN+YAS +W VA+LRK+MK + KS G S+ E ++H F SHP+
Sbjct: 536 GTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQ 595
Query: 503 NEIFALLD 510
I +LD
Sbjct: 596 ESILKILD 603
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 143/283 (50%), Gaps = 32/283 (11%)
Query: 160 ARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQY 219
AR+LFDEMP R + +WN +++G+ + G++D A ++F LMP RNVVSWT ++ GY N +
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 220 EKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFF--KNLYVS 277
+ A LF +M N V+ +L +G L+ G R++ + K+
Sbjct: 127 DVAESLFWKMP-----EKNKVSWTVML-----IGFLQDG-RIDDACKLYEMIPDKDNIAR 175
Query: 278 NAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGT 337
+++ K G +D A +F+E+ S R++ +W +M+ G + + A +++D M +
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEM-SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT- 233
Query: 338 TPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGC--MVDLLGRAGKLRE 395
+V++ +L+ G +E +F+ ++P C M+ LG+ G++ +
Sbjct: 234 ---EVSWTSMLMGYVQNGRIEDAEELFE-------VMPVKPVIACNAMISGLGQKGEIAK 283
Query: 396 AYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTL 438
A V +M + D+ W T++ +G E+ A LF L
Sbjct: 284 ARRVFDSMKERNDAS-WQTVIKIHERNG----FELEALDLFIL 321
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 59/318 (18%)
Query: 152 AKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMIS 211
+++G + AR+LFD + + +WN+M+AG+ A +LF MP RN++SW ++S
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVS 87
Query: 212 GYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFF 271
GY KN + ++A +F D+MP
Sbjct: 88 GYMKNGEIDEARKVF-------DLMPE--------------------------------- 107
Query: 272 KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQ 331
+N+ A+++ Y G +DVA +F ++ +N SW M++G G+ A +LY+
Sbjct: 108 RNVVSWTALVKGYVHNGKVDVAESLFWKMPE-KNKVSWTVMLIGFLQDGRIDDACKLYEM 166
Query: 332 MLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAG 391
+ D++ ++ G V++ R IF M ++ ++I + MV G+
Sbjct: 167 I----PDKDNIARTSMIHGLCKEGRVDEAREIFDEM-SERSVIT----WTTMVTGYGQNN 217
Query: 392 KLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSN 451
++ +A ++ MP K + V W ++L +G +E AE LF + P P VI N
Sbjct: 218 RVDDARKIFDVMPEKTE-VSWTSMLMGYVQNGRIE----DAEELFEVMPVKP---VIACN 269
Query: 452 IYASA-DQWDGVAKLRKV 468
S Q +AK R+V
Sbjct: 270 AMISGLGQKGEIAKARRV 287
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 51/288 (17%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
D A T+++ K G ++ AR +FDEM R V TW M+ G+ + VD A ++F +MP
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
+ VSWT+M+ GY +N + E A LF ++MP
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELF-------EVMP---------------------- 261
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
K + NA++ + G I A RVF+ + RN SW ++I +H
Sbjct: 262 -----------VKPVIACNAMISGLGQKGEIAKARRVFDSMKE-RNDASWQTVI---KIH 306
Query: 320 GKCG---KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM-KTDFNIIP 375
+ G +AL+L+ M ++G P T + +L C + G+ + + + F++
Sbjct: 307 ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV-- 364
Query: 376 KLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ ++ + + G+L ++ + P K D ++W +++ + HG
Sbjct: 365 DVYVASVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASHG 411
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 42/211 (19%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +HA ++ F DV+ A+ L+ MY K G L ++ +FD P +++ WN++++G+A
Sbjct: 350 GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYAS 409
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G + AL++F MP +SG +K PN VT +
Sbjct: 410 HGLGEEALKVFCEMP----------LSGSTK---------------------PNEVTFVA 438
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVS---NAVLEMYAKCGHIDVAWRVFNEIG 301
L AC+ G +E G ++ Y F ++ +++M + G + A + + +
Sbjct: 439 TLSACSYAGMVEEGLKI--YESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT 496
Query: 302 SLRNLCSWNSMIMGLAVHGK------CGKAL 326
+ W S++ H + C K L
Sbjct: 497 VEPDAAVWGSLLGACRTHSQLDVAEFCAKKL 527
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 226/371 (60%), Gaps = 6/371 (1%)
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGH 182
+++ + S P F+ + L + L + R + ++ R + +N ++ +
Sbjct: 222 IVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLY 281
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
G D A ++F M RNVV+W ++IS SK + + LF +M+ EE I + TL
Sbjct: 282 MESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ-EEMIGFSWATL 340
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+ILPAC+ + AL G+ + A K+ ++ + N++++MY KCG ++ + RVF+ + +
Sbjct: 341 TTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLT 400
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
++L SWN M+ A++G + + L++ M+ G PD +TFV LL C+ G+ E G
Sbjct: 401 -KDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS 459
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
+F+ MKT+F + P LEHY C+VD+LGRAGK++EA +VI+TMP KP + IWG+LL +C H
Sbjct: 460 LFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 519
Query: 423 GNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSF 482
GNV + EIAA+ LF LEP NPGNYV++SNIYA A WD V K+R++MK + K AG S+
Sbjct: 520 GNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSW 579
Query: 483 LEEGGQLHKFI 493
++ ++ F+
Sbjct: 580 VQVKDKIQIFV 590
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 40/286 (13%)
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
+ L+ +++ L+LAR++FD++ D +L ++
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDV--------------------TDSSLLTEKV------- 203
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
W M GYS+N AL +++ M C I P +++ L AC +L L +G+ + A
Sbjct: 204 -WAAMAIGYSRNGSPRDALIVYVDMLCSF-IEPGNFSISVALKACVDLKDLRVGRGIHAQ 261
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
K + V N +L++Y + G D A +VF+ + S RN+ +WNS+I L+ + +
Sbjct: 262 IVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGM-SERNVVTWNSLISVLSKKVRVHE 320
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR----HIFKSMKTDFNIIPKLEHY 380
L+ +M E T +L AC+ + G+ I KS + P +
Sbjct: 321 MFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEK-----PDVPLL 375
Query: 381 GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE 426
++D+ G+ G++ + V M K D W +L + +GN+E
Sbjct: 376 NSLMDMYGKCGEVEYSRRVFDVMLTK-DLASWNIMLNCYAINGNIE 420
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +HA +KS PDV +L+DMY K G +E +RR+FD M +++ +WN M+ +A
Sbjct: 356 GKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAI 415
Query: 185 FGDVDGALELFRLMPSRNV----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAV 240
G+++ + LF M V +++ ++SG S E L LF RM+ E + P
Sbjct: 416 NGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALE 475
Query: 241 TLASILPACANLGALEIGQRV 261
A ++ G ++ +V
Sbjct: 476 HYACLVDILGRAGKIKEAVKV 496
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 244/450 (54%), Gaps = 8/450 (1%)
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYX-XXXXXXXXXXXXXXXX 124
P F +N ++ + C SL+ +M P+ Y
Sbjct: 165 PKRVAFAWNIMISGHAHCGKLES-CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVY 223
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+M+HA +K+G++ V A ++L Y K+G+ + A R + + V +WN+++ +
Sbjct: 224 GRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK 283
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G+ + ALE+F L P +N+V+WTTMI+GY +N E+AL F+ M + + + +
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMM-KSGVDSDHFAYGA 342
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L AC+ L L G+ + GF YV NA++ +YAKCG I A R F +I + +
Sbjct: 343 VLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIAN-K 401
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+L SWN+M+ VHG +AL+LYD M+ G PD+VTF+GLL C+H G+VE+G IF
Sbjct: 402 DLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIF 461
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQT----MPMKPDSVIWGTLLGACS 420
+SM D+ I +++H CM+D+ GR G L EA ++ T + ++ W TLLGACS
Sbjct: 462 ESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACS 521
Query: 421 FHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGH 480
H + EL ++ L EP ++V+LSN+Y S +W +R+ M + K+ G
Sbjct: 522 THWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGC 581
Query: 481 SFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
S++E G Q+ F+V D SHP+ E+ L+
Sbjct: 582 SWIEVGNQVSTFVVGDSSHPRLEELSETLN 611
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 169/415 (40%), Gaps = 45/415 (10%)
Query: 46 IEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPN 105
I L + + A+ V P +N +L +Y +L++Q+R P+
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEA-IALFTQLRFSDAKPD 69
Query: 106 QYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFD 165
Y G+ + + I+SGF + +L+DMY K A ++F
Sbjct: 70 DYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFR 129
Query: 166 EMPV--REVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKAL 223
+M R TW +++ + + AL++F MP R +W MISG++ + E L
Sbjct: 130 DMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCL 189
Query: 224 GLFLRMECEEDIMPNAVTLASILPAC-ANLGALEIGQRVEAYARKNGFFKNLYVSNAVLE 282
LF M E + P+ T +S++ AC A+ + G+ V A KNG+ + N+VL
Sbjct: 190 SLFKEM-LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLS 248
Query: 283 MYAKCGHIDVAWRVFNEIGSL------------------------------RNLCSWNSM 312
Y K G D A R I L +N+ +W +M
Sbjct: 249 FYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTM 308
Query: 313 IMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFN 372
I G +G +AL + +M++ G D + +L AC+ ++ G+ I +
Sbjct: 309 ITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL----- 363
Query: 373 IIPKLEHYG----CMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
I + Y +V+L + G ++EA + K D V W T+L A HG
Sbjct: 364 IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK-DLVSWNTMLFAFGVHG 417
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 257/441 (58%), Gaps = 9/441 (2%)
Query: 94 YSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAK 153
+ ++ LG PN++ G+ LH + +K G A +VF +A+L+ Y K
Sbjct: 81 FKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVK 140
Query: 154 VGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGY 213
+ TL ARR FD+ V + +++G+ + + + AL LFR MP R+VV+W +I G+
Sbjct: 141 LSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGF 200
Query: 214 SKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKN-GFFK 272
S+ + E+A+ F+ M E ++PN T + A +N+ + G+ + A A K G
Sbjct: 201 SQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRF 260
Query: 273 NLYVSNAVLEMYAKCGHIDVAWRVFNEIGS-LRNLCSWNSMIMGLAVHGKCGKALELYDQ 331
N++V N+++ Y+KCG+++ + FN++ RN+ SWNSMI G A +G+ +A+ ++++
Sbjct: 261 NVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEK 320
Query: 332 MLREGT-TPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNI--IPKLEHYGCMVDLLG 388
M+++ P++VT +G+L AC H G++++G F D++ + +LEHY CMVD+L
Sbjct: 321 MVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLS 380
Query: 389 RAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVI 448
R+G+ +EA E+I++MP+ P W LLG C H N LA++AA + L+PR+ +YV+
Sbjct: 381 RSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVM 440
Query: 449 LSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFAL 508
LSN Y++ + W V+ +R+ MK + + + G S++E Q+ F+ D+++ +E++ +
Sbjct: 441 LSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRM 500
Query: 509 LDGVYEMFKFNRSAFECHLDL 529
L V + + N EC DL
Sbjct: 501 LALVSQHLEEN----ECWKDL 517
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/420 (35%), Positives = 228/420 (54%), Gaps = 34/420 (8%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
+Y QM L Y G+ +HA IK GF ++ ++LD+
Sbjct: 198 LKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDL 257
Query: 151 YAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMI 210
Y + G L A+ F E M +++++W T+I
Sbjct: 258 YCRCGYLSEAKHYFHE-------------------------------MEDKDLITWNTLI 286
Query: 211 SGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGF 270
S ++ E AL +F R E + +PN T S++ ACAN+ AL GQ++ + GF
Sbjct: 287 SELERSDSSE-ALLMFQRFE-SQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 271 FKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYD 330
KN+ ++NA+++MYAKCG+I + RVF EI RNL SW SM++G HG +A+EL+D
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 331 QMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRA 390
+M+ G PD + F+ +L AC H G+VEKG F M++++ I P + Y C+VDLLGRA
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 391 GKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG-NVELAEIAAESLFTLEPRNPGNYVIL 449
GK+ EAYE+++ MP KPD WG +LGAC H N ++ +AA + L+P+ G YV+L
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVML 524
Query: 450 SNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALL 509
S IYA+ +W A++RK+M+ K AG S++ Q+ F V D+ P ++ ++++L
Sbjct: 525 SYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVL 584
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 179/420 (42%), Gaps = 48/420 (11%)
Query: 9 FKFSTLRNP---NSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHS 65
F S+LRN +S+N K + L T LI E + A+++
Sbjct: 18 FVRSSLRNAGVESSQNTEYPPYKPKKHHILAT------NLIVSYFEKGLVEEARSLFDEM 71
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
P+ V + ++ Y + + +M G SPN++ G
Sbjct: 72 PDRDVVAWTAMITGYASSNYNAR-AWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYG 130
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVG-TLELARRLFDEMPVREVPTWNAMMAGHAR 184
++H +K G ++ A+++MYA T+E A +F ++ V+ TW ++ G
Sbjct: 131 ALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTH 190
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
GD G L++++ M N ++ P +T+A
Sbjct: 191 LGDGIGGLKMYKQMLLENA------------------------------EVTPYCITIA- 219
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+ A A++ ++ G+++ A K GF NL V N++L++Y +CG++ A F+E+ +
Sbjct: 220 -VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMED-K 277
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+L +WN++I L +AL ++ + +G P+ TF L+ AC + + G+ +
Sbjct: 278 DLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 336
Query: 365 -KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ + FN +E ++D+ + G + ++ V + + + V W +++ HG
Sbjct: 337 GRIFRRGFN--KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 122/320 (38%), Gaps = 48/320 (15%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
KQIH ++ G ++ +L++ L A+ H + + +N L+
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS--ELE 290
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
++ + G PN Y GQ LH + GF +V
Sbjct: 291 RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVEL 350
Query: 144 ATALLDMYAKVGTLELARRLFDEM-PVREVPTWNAMMAGHARFGDVDGALELFRLMPSRN 202
A AL+DMYAK G + ++R+F E+ R + +W +MM G+ G A+ELF M S
Sbjct: 351 ANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVS-- 408
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR-V 261
SG I P+ + ++L AC + G +E G +
Sbjct: 409 --------SG----------------------IRPDRIVFMAVLSACRHAGLVEKGLKYF 438
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
+ G + + N V+++ + G I A+ + + + +W +++ H
Sbjct: 439 NVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKH 498
Query: 322 CG--------KALELYDQML 333
G K +EL +M+
Sbjct: 499 NGLISRLAARKVMELKPKMV 518
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 226/408 (55%), Gaps = 38/408 (9%)
Query: 139 PDVFAATALLDMYAKVGTLELARRLFDEM----------------PVR------------ 170
PD+ A A++ Y G EL+ LF E+ PV
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGY 344
Query: 171 --------EVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKA 222
A+ +++ +++ A +LF P +++ SW MISGY++N E A
Sbjct: 345 CLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 404
Query: 223 LGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLE 282
+ LF M+ + + PN VT+ IL ACA LGAL +G+ V R F ++YVS A++
Sbjct: 405 ISLFREMQ-KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 283 MYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDV 342
MYAKCG I A R+F+ + + +N +WN+MI G +HG+ +AL ++ +ML G TP V
Sbjct: 464 MYAKCGSIAEARRLFD-LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPV 522
Query: 343 TFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQT 402
TF+ +L AC+H G+V++G IF SM + P ++HY CMVD+LGRAG L+ A + I+
Sbjct: 523 TFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEA 582
Query: 403 MPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGV 462
M ++P S +W TLLGAC H + LA +E LF L+P N G +V+LSNI+++ +
Sbjct: 583 MSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQA 642
Query: 463 AKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
A +R+ K ++ K+ G++ +E G H F D+SHP+ EI+ L+
Sbjct: 643 ATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLE 690
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 36/325 (11%)
Query: 30 IHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXX 89
+HG+ R I L ++L ++ ++YA+ + VFL+N L++ +
Sbjct: 45 LHGF--RNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSS 102
Query: 90 CFSLYSQMRLLGH-SPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALL 148
S+++ +R PN G+++H + G ++ + ++
Sbjct: 103 -LSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIV 161
Query: 149 DMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTT 208
MY K +E AR++FD M P ++ + W T
Sbjct: 162 KMYFKFWRVEDARKVFDRM-------------------------------PEKDTILWNT 190
Query: 209 MISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKN 268
MISGY KN+ Y +++ +F + E + TL ILPA A L L +G ++ + A K
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 269 GFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALEL 328
G + + YV + +Y+KCG I + +F E ++ ++N+MI G +G+ +L L
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRK-PDIVAYNAMIHGYTSNGETELSLSL 309
Query: 329 YDQMLREGTTPDDVTFVGLLLACTH 353
+ +++ G T V L+ H
Sbjct: 310 FKELMLSGARLRSSTLVSLVPVSGH 334
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 9/244 (3%)
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+++ G + LFR ++V++ MI GY+ N + E +L LF + + ++ T
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS-T 324
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
L S++P G L + + Y K+ F + VS A+ +Y+K I+ A ++F+E
Sbjct: 325 LVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE-S 380
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
++L SWN+MI G +G A+ L+ +M + +P+ VT +L AC G + G+
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 362 HIFKSMK-TDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACS 420
+ ++ TDF + ++ + + G + EA + M K + V W T++
Sbjct: 441 WVHDLVRSTDFE--SSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISGYG 497
Query: 421 FHGN 424
HG
Sbjct: 498 LHGQ 501
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 131/330 (39%), Gaps = 46/330 (13%)
Query: 27 VKQIHGYTLRTGI-------DQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQA 79
+ IHGY L++ T+ KL EI + A+ + SP ++ +N ++
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES---ARKLFDESPEKSLPSWNAMISG 394
Query: 80 YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
Y SL+ +M+ SPN G+ +H + F
Sbjct: 395 YTQNGLTED-AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
++ +TAL+ MYAK G++ ARRLFD M + TWN M
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTM--------------------- 492
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
ISGY + Q ++AL +F M I P VT +L AC++ G ++ G
Sbjct: 493 ----------ISGYGLHGQGQEALNIFYEM-LNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 260 RV-EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAV 318
+ + + GF ++ ++++ + GH+ A + + W +++ +
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLL 348
H A + +++ PD+V + LL
Sbjct: 602 HKDTNLARTVSEKLFE--LDPDNVGYHVLL 629
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 120/301 (39%), Gaps = 35/301 (11%)
Query: 129 HAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDV 188
HA I GF D+ T L + +G + AR +F + +V +N +M
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM--------- 90
Query: 189 DGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA 248
G+S N+ +L +F + D+ PN+ T A + A
Sbjct: 91 ----------------------RGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISA 128
Query: 249 CANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCS 308
+ G+ + A +G L + + +++MY K ++ A +VF+ + ++
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE-KDTIL 187
Query: 309 WNSMIMGLAVHGKCGKALELYDQMLREGTTP-DDVTFVGLLLACTHGGMVEKGRHIFKSM 367
WN+MI G + ++++++ ++ E T D T + +L A + G I S+
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI-HSL 246
Query: 368 KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVEL 427
T + L + GK++ + + KPD V + ++ + +G EL
Sbjct: 247 ATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF-RKPDIVAYNAMIHGYTSNGETEL 305
Query: 428 A 428
+
Sbjct: 306 S 306
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 263/551 (47%), Gaps = 75/551 (13%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
+Q+H YT + G + LL + ++ A + V L+N +L AY
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
F ++ QM++ PNQY G+ +H+ IK+ F + +
Sbjct: 469 DDLRNS-FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
+ L+DMYAK+G L+ A + ++V +W M+AG+ ++ D AL FR M R +
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 204 -------------------------VSWTTMISGYSKNKQYEKALGL------------- 225
+ +SG+S + ++ AL
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 226 -FLRMECEEDIMPNAV------------------------------TLASILPACANLGA 254
F + E ++I NA+ T S + A +
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 255 LEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIM 314
++ G++V A K G+ V NA++ MYAKCG I A + F E+ S +N SWN++I
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV-STKNEVSWNAIIN 766
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
+ HG +AL+ +DQM+ P+ VT VG+L AC+H G+V+KG F+SM +++ +
Sbjct: 767 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 826
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAES 434
PK EHY C+VD+L RAG L A E IQ MP+KPD+++W TLL AC H N+E+ E AA
Sbjct: 827 PKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHH 886
Query: 435 LFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIV 494
L LEP + YV+LSN+YA + +WD R+ MK + K G S++E +H F V
Sbjct: 887 LLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYV 946
Query: 495 EDRSHPKSNEI 505
D++HP ++EI
Sbjct: 947 GDQNHPLADEI 957
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 173/427 (40%), Gaps = 42/427 (9%)
Query: 7 TTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQ----TKTLIEKLLEIPNLHYAQAVL 62
T + FS++ + K + +Q+HG L+ G L+ + NL A+ +
Sbjct: 287 TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 63 HHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXX 122
+ YN L+ L+ +M L G P+
Sbjct: 347 SNMSQRDAVTYNTLING-LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 123 XXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
GQ LHA+ K GFA + ALL++YAK +E A F E V V WN M+ +
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
D+ + +FR M E+I+PN T
Sbjct: 466 GLLDDLRNSFRIFRQMQI--------------------------------EEIVPNQYTY 493
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
SIL C LG LE+G+++ + K F N YV + +++MYAK G +D AW +
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
+++ SW +MI G + KAL + QML G D+V + AC +++G+
Sbjct: 554 -KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 363 IF-KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
I ++ + F+ L +V L R GK+ E+Y + D++ W L+
Sbjct: 613 IHAQACVSGFS--SDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQ 669
Query: 422 HGNVELA 428
GN E A
Sbjct: 670 SGNNEEA 676
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 186/404 (46%), Gaps = 43/404 (10%)
Query: 21 NIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKL 76
N +++ +++H L+ G+D L EKL + +L+ A V P T+F +NK+
Sbjct: 98 NGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 77 LQAYXXXXXXXXXCFSLYSQMRLLGHSPNQ-YXXXXXXXXXXXXXXXXXGQMLHAHFIKS 135
++ F L+ +M +PN+ + +HA +
Sbjct: 158 IKE-LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELF 195
G L+D+Y++ G ++LARR+FD + +++ +W A
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA------------------ 258
Query: 196 RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL 255
MISG SKN+ +A+ LF M IMP +S+L AC + +L
Sbjct: 259 -------------MISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESL 304
Query: 256 EIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMG 315
EIG+++ K GF + YV NA++ +Y G++ A +F+ + S R+ ++N++I G
Sbjct: 305 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM-SQRDAVTYNTLING 363
Query: 316 LAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK-SMKTDFNII 374
L+ G KA+EL+ +M +G PD T L++AC+ G + +G+ + + K F
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN 423
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
K+E G +++L + + A + ++ + V+W +L A
Sbjct: 424 NKIE--GALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVA 464
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 147/329 (44%), Gaps = 41/329 (12%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
L+ M +LG P Y G+ LH +K GF+ D + AL+ +Y
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 334
Query: 153 KVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISG 212
+G L A +F M R+ V++ T+I+G
Sbjct: 335 HLGNLISAEHIFSN-------------------------------MSQRDAVTYNTLING 363
Query: 213 YSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFK 272
S+ EKA+ LF RM + + P++ TLAS++ AC+ G L GQ++ AY K GF
Sbjct: 364 LSQCGYGEKAMELFKRMHLD-GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 273 NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQM 332
N + A+L +YAKC I+ A F E + N+ WN M++ + + ++ QM
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Query: 333 LREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS-MKTDFNIIPKLEHYGC--MVDLLGR 389
E P+ T+ +L C G +E G I +KT+F +L Y C ++D+ +
Sbjct: 482 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF----QLNAYVCSVLIDMYAK 537
Query: 390 AGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
GKL A++++ K D V W T++
Sbjct: 538 LGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/394 (39%), Positives = 229/394 (58%), Gaps = 12/394 (3%)
Query: 129 HAHFIKSGFA--PDVFAATALLDMYAKVGTLELARRLFDEMPVRE--VPTWNAMMAGHAR 184
HA K G+ P + +T + Y + LARRL V N ++ +
Sbjct: 53 HAQIFKLGYGTYPSLLVST--VAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMK 110
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G+ A ++ R +NV++W MI GY +N QYE+AL M DI PN + AS
Sbjct: 111 IGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFAS 170
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
L ACA LG L + V + +G N +S+A++++YAKCG I + VF + R
Sbjct: 171 SLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK--R 228
Query: 305 NLCS-WNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
N S WN+MI G A HG +A+ ++ +M E +PD +TF+GLL C+H G++E+G+
Sbjct: 229 NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEY 288
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
F M F+I PKLEHYG MVDLLGRAG+++EAYE+I++MP++PD VIW +LL + +
Sbjct: 289 FGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYK 348
Query: 424 NVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
N EL EIA ++ L G+YV+LSNIY+S +W+ K+R++M I K+ G S+L
Sbjct: 349 NPELGEIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWL 405
Query: 484 EEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
E GG +H+F D SH ++ I+ +L+G+ + K
Sbjct: 406 EFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTK 439
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 112/281 (39%), Gaps = 33/281 (11%)
Query: 34 TLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSL 93
+L G+ +IE L++I A+ VL ++ + V +N ++ Y +L
Sbjct: 93 SLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKAL 152
Query: 94 YSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAK 153
+ + PN++ + +H+ I SG + ++AL+D+YAK
Sbjct: 153 KNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAK 212
Query: 154 VGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGY 213
G + +R +F + +V WNAM+ G A G A+ +F M +
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEA------------- 259
Query: 214 SKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY-ARKNGFFK 272
E + P+++T +L C++ G LE G+ +R+
Sbjct: 260 -------------------EHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQP 300
Query: 273 NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
L A++++ + G + A+ + + ++ W S++
Sbjct: 301 KLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 226/420 (53%), Gaps = 38/420 (9%)
Query: 93 LYSQMRLLGHS-PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMY 151
LYS M+ + +S PN + G+ +H H +++G D ++L+DMY
Sbjct: 204 LYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY 263
Query: 152 AKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMIS 211
K G +D A +F + ++VVSWT+MI
Sbjct: 264 GKCGC-------------------------------IDEARNIFDKIVEKDVVSWTSMID 292
Query: 212 GYSKNKQYEKALGLFLRM--ECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNG 269
Y K+ ++ + LF + CE PN T A +L ACA+L E+G++V Y + G
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCER---PNEYTFAGVLNACADLTTEELGKQVHGYMTRVG 349
Query: 270 FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELY 329
F + S+++++MY KCG+I+ A V + +L SW S+I G A +G+ +AL+ +
Sbjct: 350 FDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK-PDLVSWTSLIGGCAQNGQPDEALKYF 408
Query: 330 DQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGR 389
D +L+ GT PD VTFV +L ACTH G+VEKG F S+ + +HY C+VDLL R
Sbjct: 409 DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLAR 468
Query: 390 AGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVIL 449
+G+ + VI MPMKP +W ++LG CS +GN++LAE AA+ LF +EP NP YV +
Sbjct: 469 SGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTM 528
Query: 450 SNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALL 509
+NIYA+A +W+ K+RK M+ +TK G S+ E + H FI D SHP N+I L
Sbjct: 529 ANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFL 588
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 162/304 (53%), Gaps = 3/304 (0%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H H SGF P + LL MYAK G+L AR++FDEMP R++ +WN M+ G+A
Sbjct: 104 GKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAE 163
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G ++ A +LF M ++ SWT M++GY K Q E+AL L+ M+ + PN T++
Sbjct: 164 VGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSI 223
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+ A A + + G+ + + + G + + +++++MY KCG ID A +F++I +
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE-K 282
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
++ SW SMI + + L+ +++ P++ TF G+L AC E G+ +
Sbjct: 283 DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVH 342
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
M T P +VD+ + G + A V+ P KPD V W +L+G C+ +G
Sbjct: 343 GYM-TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQ 400
Query: 425 VELA 428
+ A
Sbjct: 401 PDEA 404
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 144/347 (41%), Gaps = 41/347 (11%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEIPN----LHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
K+IHG+ +R G+D + L L+++ + A+ + V + ++ Y
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
FSL+S++ PN+Y G+ +H + + GF P FA
Sbjct: 298 SRWREG-FSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
+++L+DMY K G +E A+ + D P ++ +W +++ G A+ G D AL+ F L+
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLL----- 411
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG-QRVE 262
+ SG P+ VT ++L AC + G +E G +
Sbjct: 412 -----LKSG----------------------TKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC 322
+ K+ ++++ A+ G + V +E+ + W S++ G + +G
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504
Query: 323 GKALELYDQMLR-EGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMK 368
A E ++ + E P VT+V + G E+ + K M+
Sbjct: 505 DLAEEAAQELFKIEPENP--VTYVTMANIYAAAGKWEEEGKMRKRMQ 549
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 237 PNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRV 296
P A T +++ C+ ALE G++V + R +GF + + N +L MYAKCG + A +V
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 297 FNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGM 356
F+E+ + R+LCSWN M+ G A G +A +L+D+M T D ++ ++
Sbjct: 143 FDEMPN-RDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSYSWTAMVTGYVKKDQ 197
Query: 357 VEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEV---IQTMPMKPDSVIWG 413
E+ ++ M+ N P + V +R E+ I + D V+W
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWS 257
Query: 414 TLL---GAC 419
+L+ G C
Sbjct: 258 SLMDMYGKC 266
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 235/414 (56%), Gaps = 32/414 (7%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
DV + TA++D AK G ++ ARRLFD MP R + +WNAM+ G+A+ +D A +LF++MP
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMP 260
Query: 200 SR-------------------------------NVVSWTTMISGYSKNKQYEKALGLFLR 228
R NV+SWTTMI+GY +NK+ E+AL +F +
Sbjct: 261 ERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSK 320
Query: 229 MECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCG 288
M + + PN T SIL AC++L L GQ++ K+ KN V++A+L MY+K G
Sbjct: 321 MLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG 380
Query: 289 HIDVAWRVF-NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGL 347
+ A ++F N + R+L SWNSMI A HG +A+E+Y+QM + G P VT++ L
Sbjct: 381 ELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNL 440
Query: 348 LLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKP 407
L AC+H G+VEKG FK + D ++ + EHY C+VDL GRAG+L++ I +
Sbjct: 441 LFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARL 500
Query: 408 DSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRK 467
+G +L AC+ H V +A+ + + + G YV++SNIYA+ + + A++R
Sbjct: 501 SRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRM 560
Query: 468 VMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFKFNRS 521
MK + K G S+++ G Q H F+V D+SHP+ + ++L + + N++
Sbjct: 561 KMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKN 614
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 177/390 (45%), Gaps = 69/390 (17%)
Query: 135 SGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALEL 194
S P V L+ KVG + AR+LFD +P R+V TW ++ G+ + GD+ A EL
Sbjct: 40 SSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREAREL 99
Query: 195 FRLMPSR-NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
F + SR NVV+WT M+SGY ++KQ A LF MP
Sbjct: 100 FDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQE-------MPE--------------- 137
Query: 254 ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
+N+ N +++ YA+ G ID A +F+E+ RN+ SWNSM+
Sbjct: 138 ------------------RNVVSWNTMIDGYAQSGRIDKALELFDEMPE-RNIVSWNSMV 178
Query: 314 MGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNI 373
L G+ +A+ L+++M R D V++ ++ G V++ R +F M + NI
Sbjct: 179 KALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCM-PERNI 233
Query: 374 IPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL----------GACS-FH 422
I + M+ + ++ EA ++ Q MP + D W T++ AC F
Sbjct: 234 IS----WNAMITGYAQNNRIDEADQLFQVMPER-DFASWNTMITGFIRNREMNKACGLFD 288
Query: 423 GNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSF 482
E I+ ++ T N N L N+++ + DG K S ++ + +
Sbjct: 289 RMPEKNVISWTTMITGYVENKENEEAL-NVFSKMLR-DGSVKPNVGTYVSILSACSDLAG 346
Query: 483 LEEGGQLHKFIVEDRSHPKSNEIF--ALLD 510
L EG Q+H+ I +S + NEI ALL+
Sbjct: 347 LVEGQQIHQLI--SKSVHQKNEIVTSALLN 374
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 163/339 (48%), Gaps = 56/339 (16%)
Query: 125 GQMLHAH--FIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
G M A F + +V TA++ Y + L +A LF EMP R V +WN M+ G+
Sbjct: 91 GDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGY 150
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
A+ G +D ALELF MP RN+VSW +M+ + + ++A+ LF RM + V+
Sbjct: 151 AQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP-----RRDVVSW 205
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+++ A G ++ +R+ + +N+ NA++ YA+ ID A ++F ++
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCMPE----RNIISWNAMITGYAQNNRIDEADQLF-QVMP 260
Query: 303 LRNLCSWNSMIMGL----AVHGKCG---------------------------KALELYDQ 331
R+ SWN+MI G ++ CG +AL ++ +
Sbjct: 261 ERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSK 320
Query: 332 MLREGTTPDDV-TFVGLLLACTH-GGMVEKGRHIF----KSMKTDFNIIPKLEHYGCMVD 385
MLR+G+ +V T+V +L AC+ G+VE G+ I KS+ I+ +++
Sbjct: 321 MLRDGSVKPNVGTYVSILSACSDLAGLVE-GQQIHQLISKSVHQKNEIVT-----SALLN 374
Query: 386 LLGRAGKLREAYEVIQT-MPMKPDSVIWGTLLGACSFHG 423
+ ++G+L A ++ + + D + W +++ + HG
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHG 413
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 45/234 (19%)
Query: 44 TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGH- 102
T+I + ++ A + P V + ++ Y +++S+M G
Sbjct: 269 TMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE-ALNVFSKMLRDGSV 327
Query: 103 SPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARR 162
PN GQ +H KS + +ALL+MY+K G L AR+
Sbjct: 328 KPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARK 387
Query: 163 LFDEMPV--REVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYE 220
+FD V R++ +WN+M+A +A G A+E++ M G+
Sbjct: 388 MFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKH----------GFK------ 431
Query: 221 KALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNL 274
P+AVT ++L AC++ G +E G FFK+L
Sbjct: 432 ----------------PSAVTYLNLLFACSHAGLVEKGME---------FFKDL 460
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 258/502 (51%), Gaps = 38/502 (7%)
Query: 7 TTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTG----IDQTKTLIEKLLEIPNLHYAQAVL 62
+ + F+ + + + I + +QIH T++ G + + L+ + +L+ A +
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMF 279
Query: 63 HHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXX 122
S + ++ ++ Y L+S+M G P++Y
Sbjct: 280 DSSGDRNSITWSAMVTGYSQNGESLEA-VKLFSRMFSAGIKPSEYTIVGVLNACSDICYL 338
Query: 123 XXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
G+ LH+ +K GF +FA TAL+DMYAK G L AR+ FD
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFD----------------- 381
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
+ R+V WT++ISGY +N E+AL L+ RM+ I+PN T+
Sbjct: 382 --------------CLQERDVALWTSLISGYVQNSDNEEALILYRRMK-TAGIIPNDPTM 426
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
AS+L AC++L LE+G++V + K+GF + + +A+ MY+KCG ++ VF +
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPN 486
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
+++ SWN+MI GL+ +G+ +ALEL+++ML EG PDDVTFV ++ AC+H G VE+G
Sbjct: 487 -KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWF 545
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
F M + PK++HY CMVDLL RAG+L+EA E I++ + +W LL AC H
Sbjct: 546 YFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNH 605
Query: 423 GNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSF 482
G EL A E L L R YV LS IY + + V ++ K M+ + ++K G S+
Sbjct: 606 GKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSW 665
Query: 483 LEEGGQLHKFIVEDRSHPKSNE 504
+E Q H F+V D HP E
Sbjct: 666 IELKNQYHVFVVGDTMHPMIEE 687
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 177/398 (44%), Gaps = 45/398 (11%)
Query: 28 KQIHGYTLRTG----IDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
+ +HG +RTG I L+ + L A ++ + V +N L+ Y
Sbjct: 34 RAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQN 93
Query: 84 --XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV 141
L+ +MR PN Y G+ HA +K D+
Sbjct: 94 GGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDI 153
Query: 142 FAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
+ T+L+ MY K G +E ++F MP R TW+ M++G+A G V+ A+++F
Sbjct: 154 YVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN----- 208
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
LFLR E EE + V ++L + A + +G+++
Sbjct: 209 -----------------------LFLR-EKEEGSDSDYV-FTAVLSSLAATIYVGLGRQI 243
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
KNG + +SNA++ MY+KC ++ A ++F+ G RN +W++M+ G + +G+
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGD-RNSITWSAMVTGYSQNGE 302
Query: 322 CGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYG 381
+A++L+ +M G P + T VG+L AC+ +E+G+ + S L
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL-HSFLLKLGFERHLFATT 361
Query: 382 CMVDLLGRAGKL---REAYEVIQTMPMKPDSVIWGTLL 416
+VD+ +AG L R+ ++ +Q + D +W +L+
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQ----ERDVALWTSLI 395
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 167/376 (44%), Gaps = 63/376 (16%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H I++G + + A L++ YAK G L A +F NA++
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIF-----------NAIIC---- 77
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKA---LGLFLRMECEEDIMPNAVT 241
++VVSW ++I+GYS+N + + LF M + DI+PNA T
Sbjct: 78 ----------------KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ-DILPNAYT 120
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
LA I A ++L + +G++ A K F ++YV +++ MY K G ++ +VF +
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGT--TPDDVTFVGLLLACTHGGMVEK 359
RN +W++M+ G A G+ +A+++++ LRE + D F +L + V
Sbjct: 181 E-RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL 239
Query: 360 GRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGAC 419
GR I + ++ + +V + + L EA ++ + + +S+ W ++
Sbjct: 240 GRQI-HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDR-NSITWSAMVTGY 297
Query: 420 SFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAG 479
S +G A +F+ + P Y I+ + A +D
Sbjct: 298 SQNGESLEAVKLFSRMFSAGIK-PSEYTIVGVLNACSDI--------------------- 335
Query: 480 HSFLEEGGQLHKFIVE 495
+LEEG QLH F+++
Sbjct: 336 -CYLEEGKQLHSFLLK 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 24/238 (10%)
Query: 232 EEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHID 291
+ ++ P+ TL L + L G+ V + G + +N ++ YAKCG +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 292 VAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKA---LELYDQMLREGTTPDDVTFVGLL 348
A +FN I +++ SWNS+I G + +G + ++L+ +M + P+ T G+
Sbjct: 67 KAHSIFNAI-ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 349 LACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYG------CMVDLLGRAGKLREAYEVIQT 402
A + GR ++ K+ +G +V + +AG + + +V
Sbjct: 126 KAESSLQSSTVGRQAHA-------LVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 403 MPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPR--NPGNYV---ILSNIYAS 455
MP + ++ W T++ + G VE A I +LF E + +YV +LS++ A+
Sbjct: 179 MPER-NTYTWSTMVSGYATRGRVEEA-IKVFNLFLREKEEGSDSDYVFTAVLSSLAAT 234
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 266/497 (53%), Gaps = 42/497 (8%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLLEIP------NLHYAQAVLHH-SPNSTVFLYNKL 76
M ++++IH + + G+ ++ LL +L +AQ + H + + +N L
Sbjct: 18 MKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYL 77
Query: 77 LQAYXXXXXXXXXCFSLYSQMRLLGHS-PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKS 135
++ + Y++M L S P+ + +H I+S
Sbjct: 78 IRGFSNSSSPLNSIL-FYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRS 136
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELF 195
GF D AT+L+ Y+ G++E+A ++FDEM
Sbjct: 137 GFLDDAIVATSLVRCYSANGSVEIASKVFDEM---------------------------- 168
Query: 196 RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL 255
P R++VSW MI +S + +AL ++ RM E + ++ TL ++L +CA++ AL
Sbjct: 169 ---PVRDLVSWNVMICCFSHVGLHNQALSMYKRMG-NEGVCGDSYTLVALLSSCAHVSAL 224
Query: 256 EIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMG 315
+G + A ++VSNA+++MYAKCG ++ A VFN + R++ +WNSMI+G
Sbjct: 225 NMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRK-RDVLTWNSMIIG 283
Query: 316 LAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIP 375
VHG +A+ + +M+ G P+ +TF+GLLL C+H G+V++G F+ M + F++ P
Sbjct: 284 YGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTP 343
Query: 376 KLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESL 435
++HYGCMVDL GRAG+L + E+I D V+W TLLG+C H N+EL E+A + L
Sbjct: 344 NVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKL 403
Query: 436 FTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVE 495
LE N G+YV++++IY++A+ A +RK+++ + G S++E G Q+HKF+V+
Sbjct: 404 VQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVD 463
Query: 496 DRSHPKSNEIFALLDGV 512
D+ HP+S I++ L V
Sbjct: 464 DKMHPESAVIYSELGEV 480
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 248/486 (51%), Gaps = 43/486 (8%)
Query: 26 QVKQIHGYTL----RTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYX 81
Q + +H + L R I TL+ + +L A+ V P + L+ Y
Sbjct: 78 QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 82 XXXXXXXXCFSL--YSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
C +L ++QM G+SPN++ G LH +K GF
Sbjct: 138 QHDRP---CDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 194
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
+V +ALLD+Y R+G +D A +F +
Sbjct: 195 NVHVGSALLDLYT-------------------------------RYGLMDDAQLVFDALE 223
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
SRN VSW +I+G+++ EKAL LF M + P+ + AS+ AC++ G LE G+
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGM-LRDGFRPSHFSYASLFGACSSTGFLEQGK 282
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
V AY K+G + N +L+MYAK G I A ++F+ + R++ SWNS++ A H
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQH 341
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G +A+ +++M R G P++++F+ +L AC+H G++++G H ++ MK D I+P+ H
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWH 400
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
Y +VDLLGRAG L A I+ MP++P + IW LL AC H N EL AAE +F L+
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELD 460
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSH 499
P +PG +VIL NIYAS +W+ A++RK MK S + K S++E +H F+ D H
Sbjct: 461 PDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERH 520
Query: 500 PKSNEI 505
P+ EI
Sbjct: 521 PQREEI 526
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 66/296 (22%)
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
++L C L G+ V A+ ++ F ++ + N +L MYAKCG ++ A +VF ++
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ- 123
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA--------CTHG- 354
R+ +W ++I G + H + AL ++QMLR G +P++ T ++ A C H
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 355 --------------------------GMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLG 388
G+++ + +F ++++ ++ + ++
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV-----SWNALIAGHA 238
Query: 389 RAGKLREAYEVIQTM---PMKPDSVIWGTLLGACSFHGNVE---------------LAEI 430
R +A E+ Q M +P + +L GACS G +E L
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 431 AAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEG 486
A +L + Y +I+ + +D +AK V S +T A H F +E
Sbjct: 299 AGNTLLDM-------YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 69/176 (39%), Gaps = 6/176 (3%)
Query: 9 FKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHH 64
F +++L S + Q K +H Y +++G TL++ + ++H A+ +
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 65 SPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXX 124
V +N LL AY + + +MR +G PN+
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGFGKEAVW-WFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPT-WNAMM 179
G + K G P+ + ++D+ + G L A R +EMP+ W A++
Sbjct: 382 GWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/351 (40%), Positives = 211/351 (60%), Gaps = 3/351 (0%)
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALE 193
K GF V+ TAL+ MY G + A ++FDEMP R TWN M+ G GD + AL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 194 LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
MP+R VVSWTT+I GY++ + ++A+ LF RM + I PN +T+ +ILPA NLG
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 254 ALEIGQRVEAYARKNGFFK-NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR-NLCSWNS 311
L++ V AY K GF ++ V+N++++ YAKCG I A++ F EI + R NL SW +
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 312 MIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKG-RHIFKSMKTD 370
MI A+HG +A+ ++ M R G P+ VT + +L AC+HGG+ E+ F +M +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 371 FNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEI 430
+ I P ++HYGC+VD+L R G+L EA ++ +P++ +V+W LLGACS + + ELAE
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 431 AAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHS 481
L LE + G+YV++SNI+ ++ + RK M + K GHS
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 259/506 (51%), Gaps = 52/506 (10%)
Query: 20 KNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLE------IPNLHYAQAVLHHSPNSTVFLY 73
K + +Q+KQ+ + L G Q+ L +LLE +L +A + + P +
Sbjct: 12 KCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDW 71
Query: 74 NKLLQAYXXXXXXXXXCFSLYSQMRLLGHSP------NQYXXXXXXXXXXXXXXXXXGQM 127
N +++ + FS Y M S +
Sbjct: 72 NAIIRGFAGSSHPSLA-FSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
LH + G + D T LLD Y+K G D
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNG-------------------------------D 159
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
+ A +LF MP R+V SW +I+G + +A+ L+ RME E I + VT+ + L
Sbjct: 160 LISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME-TEGIRRSEVTVVAALG 218
Query: 248 ACANLGALEIGQRV-EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
AC++LG ++ G+ + Y+ N + VSNA ++MY+KCG +D A++VF + +++
Sbjct: 219 ACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSV 273
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
+WN+MI G AVHG+ +ALE++D++ G PDDV+++ L AC H G+VE G +F +
Sbjct: 274 VTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNN 333
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE 426
M + ++HYGC+VDLL RAG+LREA+++I +M M PD V+W +LLGA + +VE
Sbjct: 334 MACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVE 392
Query: 427 LAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEG 486
+AEIA+ + + N G++V+LSN+YA+ +W V ++R M+ Q+ K G S++E
Sbjct: 393 MAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAK 452
Query: 487 GQLHKFIVEDRSHPKSNEIFALLDGV 512
G +H+F D+SH + EI+ +D +
Sbjct: 453 GTIHEFYNSDKSHEQWREIYEKIDEI 478
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 259/495 (52%), Gaps = 42/495 (8%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLH----HSPNSTVFLYNKLLQA 79
+ Q++Q+H + + TG ++++L+ KL+ + A A H P FL+N ++++
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 80 YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
C + Y +M SP+ Y G+ +H H + SGF
Sbjct: 82 -TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL 140
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
D + AL+ Y+K G D++GA ++F MP
Sbjct: 141 DTYVQAALVTFYSKCG-------------------------------DMEGARQVFDRMP 169
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
+++V+W +++SG+ +N ++A+ +F +M E P++ T S+L ACA GA+ +G
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMR-ESGFEPDSATFVSLLSACAQTGAVSLGS 228
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
V Y G N+ + A++ +Y++CG + A VF+++ N+ +W +MI H
Sbjct: 229 WVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKET-NVAAWTAMISAYGTH 287
Query: 320 GKCGKALELYDQMLRE-GTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLE 378
G +A+EL+++M + G P++VTFV +L AC H G+VE+GR ++K M + +IP +E
Sbjct: 288 GYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVE 347
Query: 379 HYGCMVDLLGRAGKLREAYEVIQTMPMKPDSV---IWGTLLGACSFHGNVELAEIAAESL 435
H+ CMVD+LGRAG L EAY+ I + + +W +LGAC H N +L A+ L
Sbjct: 348 HHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRL 407
Query: 436 FTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVE 495
LEP NPG++V+LSNIYA + + D V+ +R M + + K G+S +E + + F +
Sbjct: 408 IALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMG 467
Query: 496 DRSHPKSNEIFALLD 510
D SH ++ EI+ L+
Sbjct: 468 DESHQETGEIYRYLE 482
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 237/380 (62%), Gaps = 9/380 (2%)
Query: 139 PDVFAATALLDMYAKVGTL----ELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALEL 194
PD A+L A +G L EL + + V N ++ +++ +D AL++
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 195 FRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGA 254
F +P +NV+SWT++I+G N + +AL +FLR + + + PNA+TL + L ACA +GA
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLR-QMKMTLQPNAITLTAALAACARIGA 513
Query: 255 LEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIM 314
L G+ + A+ + G + ++ NA+L+MY +CG ++ AW FN +++ SWN ++
Sbjct: 514 LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN--SQKKDVTSWNILLT 571
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
G + G+ +EL+D+M++ PD++TF+ LL C+ MV +G F M+ D+ +
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVT 630
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAES 434
P L+HY C+VDLLGRAG+L+EA++ IQ MP+ PD +WG LL AC H ++L E++A+
Sbjct: 631 PNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQH 690
Query: 435 LFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIV 494
+F L+ ++ G Y++L N+YA +W VAK+R++MK + +T AG S++E G++H F+
Sbjct: 691 IFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLS 750
Query: 495 EDRSHPKSNEIFALLDGVYE 514
+D+ HP++ EI +L+G YE
Sbjct: 751 DDKYHPQTKEINTVLEGFYE 770
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 175/405 (43%), Gaps = 50/405 (12%)
Query: 28 KQIHGYTLRTG----IDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
K++H + +R G ID LI ++ ++ A+ + P + +N ++ Y
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
L+ MR L P+ G+ +HA+ I +GFA D+
Sbjct: 276 GMCHEG-LELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
+L MY G+ A +LF M +++
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRME-------------------------------RKDI 363
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
VSWTTMISGY N +KA+ + RM ++ + P+ +T+A++L ACA LG L+ G +
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
A K + V+N ++ MY+KC ID A +F+ I +N+ SW S+I GL ++ +C
Sbjct: 423 LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR-KNVISWTSIIAGLRLNNRCF 481
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR----HIFKSMKTDFNIIPKLEH 379
+AL QM + P+ +T L AC G + G+ H+ ++ + +P
Sbjct: 482 EALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--- 537
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
++D+ R G++ A+ Q K D W LL S G
Sbjct: 538 --ALLDMYVRCGRMNTAWS--QFNSQKKDVTSWNILLTGYSERGQ 578
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 169/405 (41%), Gaps = 38/405 (9%)
Query: 38 GIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQM 97
G++ + + NL A V +F +N L+ Y LY +M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEA-MCLYHRM 186
Query: 98 RLLGH-SPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGT 156
+G P+ Y G+ +H H ++ G+ D+ AL+ MY K G
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG- 245
Query: 157 LELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKN 216
DV A LF MP R+++SW MISGY +N
Sbjct: 246 ------------------------------DVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 217 KQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYV 276
+ L LF M + P+ +TL S++ AC LG +G+ + AY GF ++ V
Sbjct: 276 GMCHEGLELFFAMR-GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 277 SNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREG 336
N++ +MY G A ++F+ + +++ SW +MI G + KA++ Y M ++
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRM-ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 337 TTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREA 396
PD++T +L AC G ++ G + K + +I + ++++ + + +A
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHK-LAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 397 YEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESL-FTLEP 440
++ +P K + + W +++ + A I + TL+P
Sbjct: 453 LDIFHNIPRK-NVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQP 496
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +HAH +++G D F ALLDMY + G + A F+ ++V +WN ++ G++
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSE 575
Query: 185 FGDVDGALELF-RLMPSR---NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAV 240
G +ELF R++ SR + +++ +++ G SK++ + L F +ME + + PN
Sbjct: 576 RGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLK 634
Query: 241 TLASILPACANLGALE 256
A ++ G L+
Sbjct: 635 HYACVVDLLGRAGELQ 650
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 244/462 (52%), Gaps = 36/462 (7%)
Query: 58 AQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRL--LGHSPNQYXXXXXXXX 115
A+ + P + +N L+ Y CF + S+M + +G PN+
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGK-CFEVLSRMMISEVGFRPNEVTFLSMISA 143
Query: 116 XXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTW 175
G+ +H +K G +V A ++ Y K G
Sbjct: 144 CVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTG-------------------- 183
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
D+ + +LF + +N+VSW TMI + +N EK L F M
Sbjct: 184 -----------DLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF-NMSRRVGH 231
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWR 295
P+ T ++L +C ++G + + Q + GF N ++ A+L++Y+K G ++ +
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSST 291
Query: 296 VFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
VF+EI S ++ +W +M+ A HG A++ ++ M+ G +PD VTF LL AC+H G
Sbjct: 292 VFHEITSPDSM-AWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSG 350
Query: 356 MVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTL 415
+VE+G+H F++M + I P+L+HY CMVDLLGR+G L++AY +I+ MPM+P S +WG L
Sbjct: 351 LVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGAL 410
Query: 416 LGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQIT 475
LGAC + + +L AAE LF LEPR+ NYV+LSNIY+++ W +++R +MK +
Sbjct: 411 LGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLV 470
Query: 476 KSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
+++G S++E G ++HKF+V D SHP+S +I L + + K
Sbjct: 471 RASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 512
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 139/303 (45%), Gaps = 43/303 (14%)
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
++LH +KS F L+ Y ++G A +LFDEMP R++ +WN++++G++
Sbjct: 51 RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
G + E+ M MIS E PN VT S+
Sbjct: 111 GYLGKCFEVLSRM----------MIS--------------------EVGFRPNEVTFLSM 140
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
+ AC G+ E G+ + K G + + V NA + Y K G + + ++F ++ S++N
Sbjct: 141 ISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDL-SIKN 199
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVE--KGRH- 362
L SWN+MI+ +G K L ++ R G PD TF+ +L +C G+V +G H
Sbjct: 200 LVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHG 259
Query: 363 --IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACS 420
+F + I L +DL + G+L ++ V + PDS+ W +L A +
Sbjct: 260 LIMFGGFSGNKCITTAL------LDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYA 312
Query: 421 FHG 423
HG
Sbjct: 313 THG 315
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 99/177 (55%), Gaps = 5/177 (2%)
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
++S++ A + ++E+ + + K+ +++ ++ + ++ Y + GH A ++F+E+
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQML--REGTTPDDVTFVGLLLACTHGGMVEK 359
R+L SWNS+I G + G GK E+ +M+ G P++VTF+ ++ AC +GG E+
Sbjct: 94 E-RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 360 GRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
GR I + F ++ +++ ++ G+ G L + ++ + + +K + V W T++
Sbjct: 153 GRCI-HGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMI 207
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 260/495 (52%), Gaps = 46/495 (9%)
Query: 28 KQIHGYTLRTGIDQTKTLI-EKLLEIPN----LHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
K+IH + +R+ I+ ++ +L++ + + YA+ + + + +N ++ Y
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 83 --XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPD 140
CF S+ G P+ G+ +H + ++ GF P
Sbjct: 311 NGRVTDAFLCFQKMSEQN--GLQPD----VITSINLLPASAILEGRTIHGYAMRRGFLPH 364
Query: 141 VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPS 200
+ TAL+DMY + G L+ A +FD M
Sbjct: 365 MVLETALIDMYGECGQLKSAEVIFDRMA-------------------------------E 393
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR 260
+NV+SW ++I+ Y +N + AL LF + + ++P++ T+ASILPA A +L G+
Sbjct: 394 KNVISWNSIIAAYVQNGKNYSALELFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
+ AY K+ ++ N + N+++ MYA CG ++ A + FN I L+++ SWNS+IM AVHG
Sbjct: 453 IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI-LLKDVVSWNSIIMAYAVHG 511
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
++ L+ +M+ P+ TF LL AC+ GMV++G F+SMK ++ I P +EHY
Sbjct: 512 FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHY 571
Query: 381 GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEP 440
GCM+DL+GR G A ++ MP P + IWG+LL A H ++ +AE AAE +F +E
Sbjct: 572 GCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEH 631
Query: 441 RNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHP 500
N G YV+L N+YA A +W+ V +++ +M+ I++++ S +E G+ H F DRSH
Sbjct: 632 DNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHV 691
Query: 501 KSNEIFALLDGVYEM 515
+N+I+ +LD V M
Sbjct: 692 ATNKIYEVLDVVSRM 706
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 177/428 (41%), Gaps = 87/428 (20%)
Query: 71 FLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHA 130
FL+N +++ + YS+M G + + G+ +HA
Sbjct: 96 FLWNVMIKGFTSCGLYIEA-VQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHA 154
Query: 131 HFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDG 190
IK GF DV+ +L+ +Y K+G A ++F+EMP R++ +WN+M++G+ GD
Sbjct: 155 MVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFS 214
Query: 191 ALELFRLM------PSR----------------------------------NVVSWTTMI 210
+L LF+ M P R +V+ T+++
Sbjct: 215 SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSIL 274
Query: 211 SGYSKNKQYEKA------------------LGLFLR-------------MECEEDIMPNA 239
YSK + A +G + R M + + P+
Sbjct: 275 DMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDV 334
Query: 240 VTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE 299
+T ++LPA A L G+ + YA + GF ++ + A+++MY +CG + A +F+
Sbjct: 335 ITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDR 390
Query: 300 IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEK 359
+ +N+ SWNS+I +GK ALEL+ ++ PD T +L A + +
Sbjct: 391 MAE-KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSE 449
Query: 360 GR----HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTL 415
GR +I KS II +V + G L +A + + +K D V W ++
Sbjct: 450 GREIHAYIVKSRYWSNTII-----LNSLVHMYAMCGDLEDARKCFNHILLK-DVVSWNSI 503
Query: 416 LGACSFHG 423
+ A + HG
Sbjct: 504 IMAYAVHG 511
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 13/258 (5%)
Query: 173 PTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECE 232
P + G A ++ AL+LF M + W MI G++ Y +A+ + RM
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VF 123
Query: 233 EDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDV 292
+ + T ++ + A + +LE G+++ A K GF ++YV N+++ +Y K G
Sbjct: 124 AGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD 183
Query: 293 AWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
A +VF E+ R++ SWNSMI G G +L L+ +ML+ G PD + + L AC+
Sbjct: 184 AEKVFEEMPE-RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMV-----DLLGRAGKLREAYEVIQTMPMKP 407
H + G+ I + ++E MV D+ + G++ A + M ++
Sbjct: 243 HVYSPKMGKEIHCHA-----VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQR 296
Query: 408 DSVIWGTLLGACSFHGNV 425
+ V W ++G + +G V
Sbjct: 297 NIVAWNVMIGCYARNGRV 314
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 228/426 (53%), Gaps = 45/426 (10%)
Query: 96 QMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIK-------SGFAPDVFAATALL 148
QM G PN+ G+ +H + IK +G + L+
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 149 DMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTT 208
DMYAK ++ AR +FD + +E R+VV+WT
Sbjct: 415 DMYAKCKKVDTARAMFDSLSPKE-----------------------------RDVVTWTV 445
Query: 209 MISGYSKNKQYEKALGLFLRMECEEDIM--PNAVTLASILPACANLGALEIGQRVEAYAR 266
MI GYS++ KAL L M EED PNA T++ L ACA+L AL IG+++ AYA
Sbjct: 446 MIGGYSQHGDANKALELLSEMF-EEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 267 KNGFFKN---LYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
+N +N L+VSN +++MYAKCG I A VF+ + + +N +W S++ G +HG
Sbjct: 505 RNQ--QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA-KNEVTWTSLMTGYGMHGYGE 561
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
+AL ++D+M R G D VT + +L AC+H GM+++G F MKT F + P EHY C+
Sbjct: 562 EALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACL 621
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
VDLLGRAG+L A +I+ MPM+P V+W L C HG VEL E AAE + L +
Sbjct: 622 VDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHD 681
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSN 503
G+Y +LSN+YA+A +W V ++R +M+ + K G S++E F V D++HP +
Sbjct: 682 GSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAK 741
Query: 504 EIFALL 509
EI+ +L
Sbjct: 742 EIYQVL 747
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 167/319 (52%), Gaps = 18/319 (5%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ LH + S ++F L+DMYAK G ++ A +F M V++V +WNAM+AG+++
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 185 FGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAV 240
G + A+ LF M +VV+W+ ISGY++ +ALG+ +M I PN V
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM-LSSGIKPNEV 366
Query: 241 TLASILPACANLGALEIGQRVEAYA-------RKNGFFKNLYVSNAVLEMYAKCGHIDVA 293
TL S+L CA++GAL G+ + YA RKNG V N +++MYAKC +D A
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 294 WRVFNEIG-SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREG--TTPDDVTFVGLLLA 350
+F+ + R++ +W MI G + HG KALEL +M E T P+ T L+A
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 351 CTHGGMVEKGRHIFK-SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDS 409
C + G+ I +++ N +P L C++D+ + G + +A V M M +
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCGSISDARLVFDNM-MAKNE 544
Query: 410 VIWGTLLGACSFHGNVELA 428
V W +L+ HG E A
Sbjct: 545 VTWTSLMTGYGMHGYGEEA 563
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 213/486 (43%), Gaps = 91/486 (18%)
Query: 24 MNQVKQIHGYTLRTGI---DQTKTLIEKLLEIPNLHYAQAVLHHSPNST--VFLYNKLLQ 78
++QVK IH L GI + T LI + + L +A ++L P S V+ +N L++
Sbjct: 41 ISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIR 100
Query: 79 AYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFA 138
+Y C L+ M L +P+ Y G+ HA + +GF
Sbjct: 101 SYGDNGCANK-CLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159
Query: 139 PDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLM 198
+VF AL+ MY++ +L AR++FDEM V +V +WN+++ +A+ G ALE+F
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS-- 217
Query: 199 PSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG 258
RM E P+ +TL ++LP CA+LG +G
Sbjct: 218 -----------------------------RMTNEFGCRPDNITLVNVLPPCASLGTHSLG 248
Query: 259 QRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAV 318
+++ +A + +N++V N +++MYAKCG +D A VF+ + S++++ SWN+M+ G +
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM-SVKDVVSWNAMVAGYSQ 307
Query: 319 HGKCGKALELYD-----------------------------------QMLREGTTPDDVT 343
G+ A+ L++ QML G P++VT
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 344 FVGLLLACTHGGMVEKGRHIF-----------KSMKTDFNIIPKLEHYGCMVDLLGRAGK 392
+ +L C G + G+ I K+ D N++ ++D+ + K
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ-----LIDMYAKCKK 422
Query: 393 LREAYEVIQTM-PMKPDSVIWGTLLGACSFHGNVELA-EIAAESLFTLEPRNPGNYVILS 450
+ A + ++ P + D V W ++G S HG+ A E+ +E P + I
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 451 NIYASA 456
+ A A
Sbjct: 483 ALVACA 488
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 241/434 (55%), Gaps = 9/434 (2%)
Query: 55 LHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPN--QYXXXXX 112
+ YA +V N + F +N +++ + +MR P+ +
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFK 123
Query: 113 XXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREV 172
+ LH ++ G D+F L+ +Y+ + ++ A +LFDE P R+V
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV 183
Query: 173 PTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECE 232
T+N ++ G + ++ A ELF MP R++VSW ++ISGY++ +A+ LF M
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEM-VA 242
Query: 233 EDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDV 292
+ P+ V + S L ACA G + G+ + Y ++ F + +++ +++ YAKCG ID
Sbjct: 243 LGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDT 302
Query: 293 AWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
A +F E+ S + L +WN+MI GLA+HG ++ + +M+ G PD VTF+ +L+ C+
Sbjct: 303 AMEIF-ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPM----KPD 408
H G+V++ R++F M++ +++ +++HYGCM DLLGRAG + EA E+I+ MP +
Sbjct: 362 HSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 409 SVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKV 468
+ W LLG C HGN+E+AE AA + L P + G Y ++ +YA+A++W+ V K+R++
Sbjct: 422 LLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREI 481
Query: 469 M-KGSQITKSAGHS 481
+ + ++ K+ G S
Sbjct: 482 IDRDKKVKKNVGFS 495
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 10/267 (3%)
Query: 44 TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS 103
LI+ L++ + A+ + P + +N L+ Y L+ +M LG
Sbjct: 188 VLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREA-IKLFDEMVALGLK 246
Query: 104 PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRL 163
P+ G+ +H + + D F AT L+D YAK G ++ A +
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 164 FDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV----VSWTTMISGYSKNKQY 219
F+ + + TWNAM+ G A G+ + ++ FR M S + V++ +++ G S +
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 220 EKALGLFLRMECEEDI---MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYV 276
++A LF +M D+ M + +A +L + E + +E + G + L
Sbjct: 367 DEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIE--EAAEMIEQMPKDGGNREKLLA 424
Query: 277 SNAVLEMYAKCGHIDVAWRVFNEIGSL 303
+ +L G+I++A + N + +L
Sbjct: 425 WSGLLGGCRIHGNIEIAEKAANRVKAL 451
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 229/399 (57%), Gaps = 41/399 (10%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+M+H +K + D F ++L+DMY+K G + AR++F ++ +++ +NAM++G+A
Sbjct: 136 GKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYAN 195
Query: 185 FGDVDGALELFRLMP---------------------------------------SRNVVS 205
D AL L + M +VVS
Sbjct: 196 NSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVS 255
Query: 206 WTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYA 265
WT++ISG N Q EKA F +M + PN+ T+ ++LPAC L ++ G+ + Y+
Sbjct: 256 WTSIISGLVHNFQNEKAFDAFKQM-LTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYS 314
Query: 266 RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKA 325
G + +V +A+L+MY KCG I A +F + + ++NSMI A HG KA
Sbjct: 315 VVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPK-KTTVTFNSMIFCYANHGLADKA 373
Query: 326 LELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVD 385
+EL+DQM G D +TF +L AC+H G+ + G+++F M+ + I+P+LEHY CMVD
Sbjct: 374 VELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVD 433
Query: 386 LLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGN 445
LLGRAGKL EAYE+I+ M M+PD +WG LL AC HGN+ELA IAA+ L LEP N GN
Sbjct: 434 LLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGN 493
Query: 446 YVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
++L+++YA+A W+ V +++K++K + + G S++E
Sbjct: 494 GLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 37/299 (12%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G++LHAH + SG A A L+ Y + G + AR++FDEMP R++ M+ AR
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G +L+ FR M Y+ L L +A + S
Sbjct: 95 NGYYQESLDFFREM--------------------YKDGLKL------------DAFIVPS 122
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L A NL E G+ + K + + ++ +++++MY+K G + A +VF+++G +
Sbjct: 123 LLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE-Q 181
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+L +N+MI G A + + +AL L M G PD +T+ L+ +H EK I
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGTLLGACS 420
+ M D P + + ++ L + +A++ + M + P+S TLL AC+
Sbjct: 242 ELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 153/498 (30%), Positives = 263/498 (52%), Gaps = 37/498 (7%)
Query: 12 STLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQA---VLHHSPNS 68
S L+ +S G++ KQ+H + ++ + L++ + + +L N
Sbjct: 421 SVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF 480
Query: 69 TVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQML 128
+ +N ++ Y L++ M G + + G+ +
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKT-LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 129 HAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDV 188
HA+ IKSG+ D++ ++ +LDMY K G + A+ FD +PV +
Sbjct: 540 HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD---------------- 583
Query: 189 DGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA 248
V+WTTMISG +N + E+A +F +M ++P+ T+A++ A
Sbjct: 584 ---------------VAWTTMISGCIENGEEERAFHVFSQMRLM-GVLPDEFTIATLAKA 627
Query: 249 CANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCS 308
+ L ALE G+++ A A K + +V ++++MYAKCG ID A+ +F I + N+ +
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI-EMMNITA 686
Query: 309 WNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMK 368
WN+M++GLA HG+ + L+L+ QM G PD VTF+G+L AC+H G+V + +SM
Sbjct: 687 WNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMH 746
Query: 369 TDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
D+ I P++EHY C+ D LGRAG +++A +I++M M+ + ++ TLL AC G+ E
Sbjct: 747 GDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETG 806
Query: 429 EIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQ 488
+ A L LEP + YV+LSN+YA+A +WD + R +MKG ++ K G S++E +
Sbjct: 807 KRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNK 866
Query: 489 LHKFIVEDRSHPKSNEIF 506
+H F+V+DRS+ ++ I+
Sbjct: 867 IHIFVVDDRSNRQTELIY 884
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 142/350 (40%), Gaps = 44/350 (12%)
Query: 45 LIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXX----XXXXCFSLYSQMRLL 100
LI + +L YA+ V P+ + +N +L AY F L+ +R
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139
Query: 101 GHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELA 160
++ + H + K G D F A AL+++Y K G ++
Sbjct: 140 VVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEG 199
Query: 161 RRLFDEMPVREVPTWNAMMAGHARFG------DVDGALELFRLMPSRNVVSWTTMISG-- 212
+ LF+EMP R+V WN M+ + G D+ A L P+ + ISG
Sbjct: 200 KVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDD 259
Query: 213 ------------------------------YSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
Y + QY L F M E D+ + VT
Sbjct: 260 SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADM-VESDVECDQVTF 318
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+L + +L +GQ+V A K G L VSN+++ MY K A VF+ + S
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM-S 377
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
R+L SWNS+I G+A +G +A+ L+ Q+LR G PD T +L A +
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 141/307 (45%), Gaps = 41/307 (13%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
GQ +H +K G + + +L++MY K+ AR +FD M
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS---------------- 377
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLR-MECEEDIMPNAVTLA 243
R+++SW ++I+G ++N +A+ LF++ + C + P+ T+
Sbjct: 378 ---------------ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC--GLKPDQYTMT 420
Query: 244 SILPACANL-GALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
S+L A ++L L + ++V +A K + +VS A+++ Y++ + A +F
Sbjct: 421 SVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF 480
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
+L +WN+M+ G K L+L+ M ++G DD T + C + +G+
Sbjct: 481 --DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ 538
Query: 363 IFK-SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
+ ++K+ +++ L ++D+ + G + A ++P+ PD V W T++ C
Sbjct: 539 VHAYAIKSGYDL--DLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIE 595
Query: 422 HGNVELA 428
+G E A
Sbjct: 596 NGEEERA 602
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 40/242 (16%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ HA + P+ F L+ MY+K G+L ARR+FD+M
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM----------------- 100
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQ-----YEKALGLFLRMECEEDIMPNA 239
P R++VSW ++++ Y+++ + ++A LF R+ ++ + +
Sbjct: 101 --------------PDRDLVSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSR 145
Query: 240 VTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE 299
+TL+ +L C + G + + YA K G + +V+ A++ +Y K G + +F E
Sbjct: 146 MTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEE 205
Query: 300 IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEK 359
+ R++ WN M+ G +A++L G P+++T LLA G +
Sbjct: 206 M-PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL--RLLARISGDDSDA 262
Query: 360 GR 361
G+
Sbjct: 263 GQ 264
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 268 bits (685), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 228/402 (56%), Gaps = 14/402 (3%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
Q H +K G V AL+DMY K G + +R+F+E+ + V +W ++ +
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRM--ECEEDIMPNAVTL 242
+ ++ E+F MP RN V+WT M++GY + L L M C + N VTL
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL--NFVTL 247
Query: 243 ASILPACANLGALEIGQRVEAYARKN-------GFFKNLYVSNAVLEMYAKCGHIDVAWR 295
S+L ACA G L +G+ V YA K + ++ V A+++MYAKCG+ID +
Sbjct: 248 CSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMN 307
Query: 296 VFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
VF + RN+ +WN++ GLA+HGK ++++ QM+RE PDD+TF +L AC+H G
Sbjct: 308 VFRLMRK-RNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSG 365
Query: 356 MVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTL 415
+V++G F S++ + + PK++HY CMVDLLGRAG + EA +++ MP+ P+ V+ G+L
Sbjct: 366 IVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSL 424
Query: 416 LGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQIT 475
LG+CS HG VE+AE L + P N +++SN+Y + + D LR ++ I
Sbjct: 425 LGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIR 484
Query: 476 KSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
K G S + +H+F DRSHP++ EI+ L+ V E +
Sbjct: 485 KIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIR 526
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 138/340 (40%), Gaps = 72/340 (21%)
Query: 125 GQMLHAHFIKSGF--APDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
G+ LHA SG AP + + AL YA G + A++LFDE+P+ E
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSE----------- 73
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
++ V WTT++S +S+ ++ LF+ M + + + V++
Sbjct: 74 ------------------KDNVDWTTLLSSFSRYGLLVNSMKLFVEMR-RKRVEIDDVSV 114
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+ CA L L Q+ A K G ++ V NA+++MY KCG + R+F E+
Sbjct: 115 VCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEE 174
Query: 303 L------------------------------RNLCSWNSMIMGLAVHGKCGKALELYDQM 332
RN +W M+ G G + LEL +M
Sbjct: 175 KSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEM 234
Query: 333 L-REGTTPDDVTFVGLLLACTHGGMVEKGR--HIFKSMKTDFNIIPKLEHYGCM-----V 384
+ R G + VT +L AC G + GR H++ ++K + + + + M V
Sbjct: 235 VFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVY-ALKKEMMMGEEASYDDVMVGTALV 293
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
D+ + G + + V + M K + V W L + HG
Sbjct: 294 DMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGK 332
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFK--NLYVSNAVLEMYAKCGHIDVAWRVFNEIG- 301
+L CA+ L G+ + A +G K Y+SNA+ + YA G + A ++F+EI
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTH---GGMVE 358
S ++ W +++ + +G +++L+ +M R+ DDV+ V L C G +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 359 KGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
+G + M ++ ++ ++D+ G+ G + E + + + K V W +L
Sbjct: 132 QGHGVAVKM----GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK-SVVSWTVVL 184
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 230/402 (57%), Gaps = 11/402 (2%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
+ +H + IK GF + + AL+ +Y K G ++ A LF ++ + + +WN+++
Sbjct: 313 AEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVD 372
Query: 185 FGDVDGALELFRLMPS--------RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIM 236
G +D AL LF + NVV+WT++I G + + + +L F +M+ + ++
Sbjct: 373 AGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSK-VL 431
Query: 237 PNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRV 296
N+VT+ IL CA L AL +G+ + + + +N+ V NA++ MYAKCG + V
Sbjct: 432 ANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLV 491
Query: 297 FNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGM 356
F I ++L SWNS+I G +HG KAL ++D+M+ G PD + V +L AC+H G+
Sbjct: 492 FEAIRD-KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGL 550
Query: 357 VEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
VEKGR IF SM F + P+ EHY C+VDLLGR G L+EA E+++ MPM+P + G LL
Sbjct: 551 VEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALL 610
Query: 417 GACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITK 476
+C H NV++AE A L LEP G+Y++LSNIY++ +W+ A +R + K + K
Sbjct: 611 NSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKK 670
Query: 477 SAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALL-DGVYEMFK 517
+G S++E + +KF + I+ +L D V M K
Sbjct: 671 VSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLK 712
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 171/410 (41%), Gaps = 60/410 (14%)
Query: 68 STVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQM 127
S + L+N +L+A LY MR G + + Y +
Sbjct: 121 SDLRLWNSILKA-NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRA 179
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
H I+ G ++ LL +Y K G + A LF EMPVR +WN M+ G ++ D
Sbjct: 180 FHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 188 VDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT-- 241
+ A+++F M + V+WT+++S +S+ ++E L F M + NAV+
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR----MSGNAVSGE 295
Query: 242 -LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAK-------------- 286
LA CA L AL I ++V Y K GF + L NA++ +Y K
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355
Query: 287 -----------------CGHIDVAWRVFNEIGSLRNLC-------SWNSMIMGLAVHGKC 322
G +D A +F+E+ + ++C +W S+I G V G+
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415
Query: 323 GKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR----HIFKSMKTDFNIIPKLE 378
+LE + QM + VT +L C + GR H+ ++ ++ NI+ +
Sbjct: 416 DDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSE-NILVQ-- 472
Query: 379 HYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+V++ + G L E V + + K D + W +++ HG E A
Sbjct: 473 --NALVNMYAKCGLLSEGSLVFEAIRDK-DLISWNSIIKGYGMHGFAEKA 519
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 40/253 (15%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPV---REVPTWNAMMAG 181
Q+L + FI F AA L+ +YA++G L AR +F+ + + ++ WN+++
Sbjct: 77 AQVLLSDFI---FRSGSLAAN-LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+ G + ALEL+R M R + GY I+P
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTG-----DGY---------------------ILP---- 162
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
IL AC LG + + + G +NL+V N +L +Y K G + A+ +F E+
Sbjct: 163 --LILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEM- 219
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
+RN SWN MI G + C A+++++ M RE PD+VT+ +L + G E
Sbjct: 220 PVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVL 279
Query: 362 HIFKSMKTDFNII 374
F M+ N +
Sbjct: 280 KYFHLMRMSGNAV 292
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 255/490 (52%), Gaps = 41/490 (8%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
+QIHG +L+ GID ++ L+ E L+ + + P +N ++ A
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
+ + G N+ G+ +H +K+ A
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIAD---- 550
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELF-RLMPSRN 202
E T NA++A + + G++DG ++F R+ R+
Sbjct: 551 ---------------------------EATTENALIACYGKCGEMDGCEKIFSRMAERRD 583
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
V+W +MISGY N+ KAL L M + ++ A++L A A++ LE G V
Sbjct: 584 NVTWNSMISGYIHNELLAKALDLVWFM-LQTGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC 322
A + + ++ V +A+++MY+KCG +D A R FN + +RN SWNSMI G A HG+
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM-PVRNSYSWNSMISGYARHGQG 701
Query: 323 GKALELYDQMLREGTTP-DDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYG 381
+AL+L++ M +G TP D VTFVG+L AC+H G++E+G F+SM + + P++EH+
Sbjct: 702 EEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFS 761
Query: 382 CMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG--NVELAEIAAESLFTLE 439
CM D+LGRAG+L + + I+ MPMKP+ +IW T+LGAC EL + AAE LF LE
Sbjct: 762 CMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLE 821
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSH 499
P N NYV+L N+YA+ +W+ + K RK MK + + K AG+S++ +H F+ D+SH
Sbjct: 822 PENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSH 881
Query: 500 PKSNEIFALL 509
P ++ I+ L
Sbjct: 882 PDADVIYKKL 891
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 144/301 (47%), Gaps = 25/301 (8%)
Query: 162 RLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEK 221
RL+ ++V N ++ + GD A ++F MP RN VSW ++SGYS+N ++++
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 222 ALGLFLRMECEEDIMPNAVTLASILPACANLGALEI--GQRVEAYARKNGFFKNLYVSNA 279
AL +FLR +E I N S+L AC +G++ I G+++ K + + VSN
Sbjct: 86 AL-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNV 144
Query: 280 VLEMYAKC-GHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTT 338
++ MY KC G + A F +I ++N SWNS+I + G A ++ M +G+
Sbjct: 145 LISMYWKCIGSVGYALCAFGDI-EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 339 PDDVTFVGLL-LACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDL---------LG 388
P + TF L+ AC+ + E + + I+ ++ G + DL
Sbjct: 204 PTEYTFGSLVTTACS---LTEPDVRLLE------QIMCTIQKSGLLTDLFVGSGLVSAFA 254
Query: 389 RAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVI 448
++G L A +V M + + G ++G E ++ + + ++ +P +YVI
Sbjct: 255 KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMD-MNSMIDVSPESYVI 313
Query: 449 L 449
L
Sbjct: 314 L 314
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 185/451 (41%), Gaps = 58/451 (12%)
Query: 19 SKNIGMNQVKQIHGYTLRTG-----IDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLY 73
++ +G+ + +++HG+ + TG + L+ + ++ A+ V + + +
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSW 383
Query: 74 NKLLQAYXXXXXXXXXCF----SLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLH 129
N ++ CF Y MR P + GQ +H
Sbjct: 384 NSMITG-----LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 130 AHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVD 189
+K G +V + AL+ +YA+ G L R++F MP + +WN+++ AR
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE--- 495
Query: 190 GALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPAC 249
R +P V +G N+ +T +S+L A
Sbjct: 496 ------RSLPEAVVCFLNAQRAGQKLNR----------------------ITFSSVLSAV 527
Query: 250 ANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSW 309
++L E+G+++ A KN NA++ Y KCG +D ++F+ + R+ +W
Sbjct: 528 SSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTW 587
Query: 310 NSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF----- 364
NSMI G + KAL+L ML+ G D + +L A +E+G +
Sbjct: 588 NSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR 647
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+++D + L VD+ + G+L A TMP++ +S W +++ + HG
Sbjct: 648 ACLESDVVVGSAL------VDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQ 700
Query: 425 VELAEIAAESLFTLEPRNPGNYVILSNIYAS 455
E A E++ L+ + P ++V + ++
Sbjct: 701 GEEALKLFETM-KLDGQTPPDHVTFVGVLSA 730
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 224/390 (57%), Gaps = 2/390 (0%)
Query: 94 YSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAK 153
Y++M G P++ G LH +K GF F ++ YA
Sbjct: 293 YTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAV 352
Query: 154 VGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGY 213
++LA + F+ + + NA++AG + G V+ A E+F +++ SW MISGY
Sbjct: 353 SNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGY 412
Query: 214 SKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKN 273
+++ + AL LF M + P+A+T+ S+ A ++LG+LE G+R Y + N
Sbjct: 413 AQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPN 472
Query: 274 LYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN--LCSWNSMIMGLAVHGKCGKALELYDQ 331
++ A+++MYAKCG I+ A +F++ ++ + + WN++I G A HG AL+LY
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSD 532
Query: 332 MLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAG 391
+ P+ +TFVG+L AC H G+VE G+ F+SMK+D I P ++HYGCMVDLLG+AG
Sbjct: 533 LQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAG 592
Query: 392 KLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSN 451
+L EA E+I+ MP+K D +IWG LL A HGNVE+AE+AA L ++P + G V+LSN
Sbjct: 593 RLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSN 652
Query: 452 IYASADQWDGVAKLRKVMKGSQITKSAGHS 481
+YA A +W+ VA +R+ M+ + S S
Sbjct: 653 VYADAGRWEDVALVREEMRTRDVEWSRAFS 682
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 135/243 (55%), Gaps = 6/243 (2%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H +KSG + + ++L+MYAK L A +F + + ++N M+ G+ R
Sbjct: 60 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 119
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
+ AL+LF +MP R+ VS+TT+I GY++N Q+ +A+ LF M IM N VTLA+
Sbjct: 120 SRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR-NLGIMLNEVTLAT 178
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ AC++LG + + +++ A K ++VS +L MY C + A ++F+E+ R
Sbjct: 179 VISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPE-R 237
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
NL +WN M+ G + G +A EL+DQ+ T D V++ ++ C +++ +
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDGCLRKNQLDEALVYY 293
Query: 365 KSM 367
M
Sbjct: 294 TEM 296
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 188/449 (41%), Gaps = 80/449 (17%)
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
P + Y L++ Y L+ +MR LG N+
Sbjct: 134 PERSCVSYTTLIKGYAQNNQWSEA-MELFREMRNLGIMLNEVTLATVISACSHLGGIWDC 192
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
+ML + IK VF +T LL MY L+ AR+LFDEMP R + TWN M+ G+++
Sbjct: 193 RMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKA 252
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRM-ECEEDIMPNAVTLAS 244
G ++ A ELF + +++VSW TMI G + Q ++AL + M C + P+ V +
Sbjct: 253 GLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC--GMKPSEVMMVD 310
Query: 245 ILPACANLGALEIGQRVEAYARKNGF------------------------------FKNL 274
+L A A G ++ K GF K+
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 275 YVS-NAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQML 333
S NA++ + K G ++ A VF++ +++ SWN+MI G A AL L+ +M+
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHD-KDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 334 REG-TTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY-GCMVDLLGRAG 391
PD +T V + A + G +E+G+ + +F+ IP ++ ++D+ + G
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL--NFSTIPPNDNLTAAIIDMYAKCG 487
Query: 392 KLREA-------------------------------------YEVIQTMPMKPDSVIWGT 414
+ A Y +Q++P+KP+S+ +
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVG 547
Query: 415 LLGACSFHGNVELAEIAAESLFT---LEP 440
+L AC G VEL + ES+ + +EP
Sbjct: 548 VLSACCHAGLVELGKTYFESMKSDHGIEP 576
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 61/238 (25%)
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
L S L +CA+ + G+++ K+G N Y+ N+VL MYAKC + A VF +
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 302 SL------------------------------RNLCSWNSMIMGLAVHGKCGKALELYDQ 331
L R+ S+ ++I G A + + +A+EL+ +
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 332 MLREGTTPDDVTFVGLLLACTH-GGMVE-------------KGR--------HIF----- 364
M G ++VT ++ AC+H GG+ + +GR H++
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 365 -KSMKTDFNIIPK--LEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGAC 419
K + F+ +P+ L + M++ +AG + +A E+ + K D V WGT++ C
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK-DIVSWGTMIDGC 280
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 253/503 (50%), Gaps = 40/503 (7%)
Query: 11 FSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSP 66
+ L N + +++H + ++T L +LL + L A+ VL P
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 67 NSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQ 126
V + ++ Y +++++M PN++ G+
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEA-LTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGK 173
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG 186
+H +K + +F ++LLDMYAK G ++ AR
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAR------------------------- 208
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
E+F +P R+VVS T +I+GY++ E+AL +F R+ E + PN VT AS+L
Sbjct: 209 ------EIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH-SEGMSPNYVTYASLL 261
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
A + L L+ G++ + + + N++++MY+KCG++ A R+F+ + R
Sbjct: 262 TALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPE-RTA 320
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREG-TTPDDVTFVGLLLACTHGGMVEKGRHIFK 365
SWN+M++G + HG + LEL+ M E PD VT + +L C+HG M + G +IF
Sbjct: 321 ISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFD 380
Query: 366 SMKT-DFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
M ++ P EHYGC+VD+LGRAG++ EA+E I+ MP KP + + G+LLGAC H +
Sbjct: 381 GMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLS 440
Query: 425 VELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
V++ E L +EP N GNYVILSN+YASA +W V +R +M +TK G S+++
Sbjct: 441 VDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Query: 485 EGGQLHKFIVEDRSHPKSNEIFA 507
LH F DR+HP+ E+ A
Sbjct: 501 HEQTLHYFHANDRTHPRREEVLA 523
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 10/227 (4%)
Query: 9 FKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQ----TKTLIEKLLEIPNLHYAQAVLHH 64
F F+T+ + G+ KQIHG ++ D +L++ + + A+ +
Sbjct: 154 FTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFEC 213
Query: 65 SPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXX 124
P V ++ Y ++ ++ G SPN
Sbjct: 214 LPERDVVSCTAIIAGYAQLGLDEEA-LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH 272
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ H H ++ +L+DMY+K G L ARRLFD MP R +WNAM+ G+++
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332
Query: 185 FGDVDGALELFRLMPSR-----NVVSWTTMISGYSKNKQYEKALGLF 226
G LELFRLM + V+ ++SG S + + L +F
Sbjct: 333 HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIF 379
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 252/496 (50%), Gaps = 38/496 (7%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQA 79
++ K I+ Y L+ G T+ L+++ ++ A+ V + +N ++
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382
Query: 80 YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
Y L+ M ++ + G+ LH++ IKSG
Sbjct: 383 YIQSGDLMEA-MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI 441
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
D+ + AL+DMYAK G +V +L++F M
Sbjct: 442 DLSVSNALIDMYAKCG-------------------------------EVGDSLKIFSSMG 470
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
+ + V+W T+IS + + L + +M + +++P+ T LP CA+L A +G+
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQVTTQMR-KSEVVPDMATFLVTLPMCASLAAKRLGK 529
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
+ + G+ L + NA++EMY+KCG ++ + RVF + S R++ +W MI ++
Sbjct: 530 EIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERM-SRRDVVTWTGMIYAYGMY 588
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G+ KALE + M + G PD V F+ ++ AC+H G+V++G F+ MKT + I P +EH
Sbjct: 589 GEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEH 648
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
Y C+VDLL R+ K+ +A E IQ MP+KPD+ IW ++L AC G++E AE + + L
Sbjct: 649 YACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELN 708
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSH 499
P +PG ++ SN YA+ +WD V+ +RK +K ITK+ G+S++E G +H F D S
Sbjct: 709 PDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSA 768
Query: 500 PKSNEIFALLDGVYEM 515
P+S I+ L+ +Y +
Sbjct: 769 PQSEAIYKSLEILYSL 784
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 193/405 (47%), Gaps = 44/405 (10%)
Query: 19 SKNIGMNQVKQIHGYTLRTGIDQTK----TLIEKLLEIPNLHYAQAVLHH-SPNSTVFLY 73
S + +N++++IH + G+D + LI+K + +V SP V+L+
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 74 NKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFI 133
N +++A+ Y ++R SP++Y G +++ +
Sbjct: 75 NSIIRAFSKNGLFPEA-LEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALE 193
GF D+F AL+DMY+++G L AR +
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRAR-------------------------------Q 162
Query: 194 LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
+F MP R++VSW ++ISGYS + YE+AL ++ ++ I+P++ T++S+LPA NL
Sbjct: 163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLL 221
Query: 254 ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
++ GQ + +A K+G + V+N ++ MY K A RVF+E+ +R+ S+N+MI
Sbjct: 222 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEM-DVRDSVSYNTMI 280
Query: 314 MGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM-KTDFN 372
G +++ ++ + L + PD +T +L AC H + ++I+ M K F
Sbjct: 281 CGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339
Query: 373 IIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
+ + + ++D+ + G + A +V +M K D+V W +++
Sbjct: 340 LESTVRN--ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIIS 381
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 157/326 (48%), Gaps = 13/326 (3%)
Query: 137 FAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAGHARFGDVDGAL 192
F PD+ +++L + L LA+ +++ M V E N ++ +A+ GD+ A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 193 ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANL 252
++F M ++ VSW ++ISGY ++ +A+ LF M E+ + +T ++ L
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRL 421
Query: 253 GALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSM 312
L+ G+ + + K+G +L VSNA+++MYAKCG + + ++F+ +G+ + +WN++
Sbjct: 422 ADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTV 480
Query: 313 IMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFN 372
I G L++ QM + PD TF+ L C G+ I + F
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCL-LRFG 539
Query: 373 IIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAA 432
+L+ ++++ + G L + V + M + D V W ++ A +G E A
Sbjct: 540 YESELQIGNALIEMYSKCGCLENSSRVFERMSRR-DVVTWTGMIYAYGMYGE---GEKAL 595
Query: 433 ESLFTLEPRN--PGNYVILSNIYASA 456
E+ +E P + V ++ IYA +
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACS 621
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 160/370 (43%), Gaps = 37/370 (10%)
Query: 55 LHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXX 114
L A+ V P + +N L+ Y +Y +++ P+ +
Sbjct: 157 LTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA-LEIYHELKNSWIVPDSFTVSSVLP 215
Query: 115 XXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPT 174
GQ LH +KSG V L+ MY K ARR+FDEM VR
Sbjct: 216 AFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR---- 271
Query: 175 WNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEED 234
+ VS+ TMI GY K + E+++ +FL E +
Sbjct: 272 ---------------------------DSVSYNTMICGYLKLEMVEESVRMFL--ENLDQ 302
Query: 235 IMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAW 294
P+ +T++S+L AC +L L + + + Y K GF V N ++++YAKCG + A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 295 RVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
VFN + ++ SWNS+I G G +A++L+ M+ D +T++ L+ T
Sbjct: 363 DVFNSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL 421
Query: 355 GMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGT 414
++ G+ + S I L ++D+ + G++ ++ ++ +M D+V W T
Sbjct: 422 ADLKFGKGL-HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNT 479
Query: 415 LLGACSFHGN 424
++ AC G+
Sbjct: 480 VISACVRFGD 489
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
++ L + +NL L +R+ A G + + S +++ Y+ + VF +
Sbjct: 10 ISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
+N+ WNS+I + +G +ALE Y ++ +PD TF ++ AC E G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
+++ + D L +VD+ R G L A +V MP++ D V W +L+ S
Sbjct: 127 LVYEQI-LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSS 184
Query: 422 HGNVELA 428
HG E A
Sbjct: 185 HGYYEEA 191
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 204/337 (60%), Gaps = 5/337 (1%)
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+A GD+ A LFR + R+++ W MISGY + ++ L ++ M + I+P+ T
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMR-QNRIVPDQYT 211
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
AS+ AC+ L LE G+R A K N+ V +A+++MY KC RVF+++
Sbjct: 212 FASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQL- 270
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
S RN+ +W S+I G HGK + L+ +++M EG P+ VTF+ +L AC HGG+V+KG
Sbjct: 271 STRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGW 330
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
F SMK D+ I P+ +HY MVD LGRAG+L+EAYE + P K +WG+LLGAC
Sbjct: 331 EHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRI 390
Query: 422 HGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHS 481
HGNV+L E+AA L+P N GNYV+ +N YAS + +K+R+ M+ + + K G+S
Sbjct: 391 HGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYS 450
Query: 482 FLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFKF 518
+E G++H+F+ +D SH S +I+ V+EM F
Sbjct: 451 QIELQGEVHRFMKDDTSHRLSEKIY---KKVHEMTSF 484
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 110/306 (35%), Gaps = 39/306 (12%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
K+IH G + L KLL + +L A + + +N ++ Y
Sbjct: 128 KRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQK 187
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
F +Y MR P+QY G+ HA IK ++
Sbjct: 188 GLEQEGLF-IYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
+AL+DMY K + R+FD++ R V TW ++++G+ G V L+ F M
Sbjct: 247 DSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMK---- 302
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG-QRVE 262
EE PN VT +L AC + G ++ G +
Sbjct: 303 ----------------------------EEGCRPNPVTFLVVLTACNHGGLVDKGWEHFY 334
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC 322
+ R G A+++ + G + A+ + + W S++ +HG
Sbjct: 335 SMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNV 394
Query: 323 GKALEL 328
K LEL
Sbjct: 395 -KLLEL 399
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 241 TLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI 300
T A +L C G+R+ A GF N Y+ +L +YA G + A +F +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 301 GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKG 360
+R+L WN+MI G G + L +Y M + PD TF + AC+ +E G
Sbjct: 170 -KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHG 228
Query: 361 RH-----IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTL 415
+ I + +K+ NII +VD+ + + + V + + + + W +L
Sbjct: 229 KRAHAVMIKRCIKS--NIIVD----SALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSL 281
Query: 416 LGACSFHGNV 425
+ +HG V
Sbjct: 282 ISGYGYHGKV 291
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 241/485 (49%), Gaps = 38/485 (7%)
Query: 30 IHGYTLRTGIDQTKTLIEKLLEI--PNLHYAQAV--LHHSPNSTVFLYNKLLQAYXXXXX 85
+HG+ +R G +L+ LL + + +AV V ++ ++ Y
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 86 XXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAAT 145
+++ M G PN G+ H I+ G +V +T
Sbjct: 245 AAEALL-VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 146 ALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVS 205
AL+DMY K + E A +F +P ++VVS
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIP-------------------------------RKDVVS 332
Query: 206 WTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYA 265
W +ISG++ N +++ F M E + P+A+ + +L +C+ LG LE + +Y
Sbjct: 333 WVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYV 392
Query: 266 RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKA 325
K GF N ++ +++E+Y++CG + A +VFN I +L++ W S+I G +HGK KA
Sbjct: 393 IKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI-ALKDTVVWTSLITGYGIHGKGTKA 451
Query: 326 LELYDQMLREG-TTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMV 384
LE ++ M++ P++VTF+ +L AC+H G++ +G IFK M D+ + P LEHY +V
Sbjct: 452 LETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLV 511
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPG 444
DLLGR G L A E+ + MP P I GTLLGAC H N E+AE A+ LF LE + G
Sbjct: 512 DLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAG 571
Query: 445 NYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNE 504
Y+++SN+Y +W+ V KLR +K I K S +E ++H+F+ +D HP+
Sbjct: 572 YYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEP 631
Query: 505 IFALL 509
++ LL
Sbjct: 632 VYGLL 636
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 159/341 (46%), Gaps = 48/341 (14%)
Query: 125 GQMLHAHFIKSG--FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
G+M+H F+K D++ ++L+ MY K G + A R+FDE+ E P
Sbjct: 79 GEMIHG-FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL---EKP--------- 125
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
++V+W++M+SG+ KN +A+ F RM D+ P+ VTL
Sbjct: 126 -------------------DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTL 166
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+++ AC L +G+ V + + GF +L + N++L YAK A +F I
Sbjct: 167 ITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE 226
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
+++ SW+++I +G +AL +++ M+ +GT P+ T + +L AC +E+GR
Sbjct: 227 -KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRK 285
Query: 363 -----IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
I K ++T+ + L VD+ + EAY V +P K D V W L+
Sbjct: 286 THELAIRKGLETEVKVSTAL------VDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALIS 338
Query: 418 ACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQ 458
+ +G + I S+ LE + +++ + S +
Sbjct: 339 GFTLNGMAHRS-IEEFSIMLLENNTRPDAILMVKVLGSCSE 378
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 123/243 (50%), Gaps = 17/243 (6%)
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
+F A ++F M R++ W T++ S+ KQ+E+ L F M +E+ P+ TL
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLP 64
Query: 244 SILPACANLGALEIGQRVEAYARKN-GFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
L AC L + G+ + + +K+ +LYV ++++ MY KCG + A R+F+E+
Sbjct: 65 VALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK 124
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQM-LREGTTPDDVTFVGLLLACTHGGMVEKGR 361
++ +W+SM+ G +G +A+E + +M + TPD VT + L+ ACT GR
Sbjct: 125 -PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 362 --HIF---KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
H F + D +++ L ++ ++ +EA + + + K D + W T++
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSL------LNCYAKSRAFKEAVNLFKMIAEK-DVISWSTVI 236
Query: 417 GAC 419
AC
Sbjct: 237 -AC 238
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/500 (31%), Positives = 251/500 (50%), Gaps = 38/500 (7%)
Query: 23 GMNQVKQIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQ 78
G+ Q KQ+H +++ G+D+ +LI+ + + A+ V P +V N L+
Sbjct: 544 GLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIA 603
Query: 79 AYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFA 138
Y L+ +M G +P++ G H K GF+
Sbjct: 604 GYSQNNLEEAVV--LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFS 661
Query: 139 PD-VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRL 197
+ + +LL MY + A LF E L
Sbjct: 662 SEGEYLGISLLGMYMNSRGMTEACALFSE------------------------------L 691
Query: 198 MPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
+++V WT M+SG+S+N YE+AL + M + ++P+ T ++L C+ L +L
Sbjct: 692 SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMR-HDGVLPDQATFVTVLRVCSVLSSLRE 750
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLA 317
G+ + + + SN +++MYAKCG + + +VF+E+ N+ SWNS+I G A
Sbjct: 751 GRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYA 810
Query: 318 VHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKL 377
+G AL+++D M + PD++TF+G+L AC+H G V GR IF+ M + I ++
Sbjct: 811 KNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARV 870
Query: 378 EHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFT 437
+H CMVDLLGR G L+EA + I+ +KPD+ +W +LLGAC HG+ EI+AE L
Sbjct: 871 DHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIE 930
Query: 438 LEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDR 497
LEP+N YV+LSNIYAS W+ LRKVM+ + K G+S+++ + H F D+
Sbjct: 931 LEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDK 990
Query: 498 SHPKSNEIFALLDGVYEMFK 517
SH + +I L+ +Y++ K
Sbjct: 991 SHSEIGKIEMFLEDLYDLMK 1010
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 183/443 (41%), Gaps = 49/443 (11%)
Query: 17 PNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFL 72
P + + K +H +L GID L ++++ + YA+ V
Sbjct: 69 PQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKD-VTA 127
Query: 73 YNKLLQAYXXXXXXXXXCFSLYS--QMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHA 130
+N +L Y S S + ++ PN++ G+ +H
Sbjct: 128 WNSMLSMYSSIGKPGKVLRSFVSLFENQIF---PNKFTFSIVLSTCARETNVEFGRQIHC 184
Query: 131 HFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA------- 183
IK G + + AL+DMYAK + ARR+F+ + W + +G+
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE 244
Query: 184 ----------------------------RFGDVDGALELFRLMPSRNVVSWTTMISGYSK 215
R G + A LF M S +VV+W MISG+ K
Sbjct: 245 AVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGK 304
Query: 216 NKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLY 275
A+ F M + + TL S+L A + L++G V A A K G N+Y
Sbjct: 305 RGCETVAIEYFFNMR-KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY 363
Query: 276 VSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLRE 335
V ++++ MY+KC ++ A +VF + +N WN+MI G A +G+ K +EL+ M
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEE-KNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 336 GTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLRE 395
G DD TF LL C +E G F S+ + L +VD+ + G L +
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 396 AYEVIQTMPMKPDSVIWGTLLGA 418
A ++ + M + D+V W T++G+
Sbjct: 482 ARQIFERMCDR-DNVTWNTIIGS 503
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 36/313 (11%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G ++HA IK G A +++ ++L+ MY+K +E A ++F+ + + WNAM+ G+A
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G+ +ELF M S SGY+ + T S
Sbjct: 406 NGESHKVMELFMDMKS----------SGYNIDD----------------------FTFTS 433
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L CA LE+G + + K KNL+V NA+++MYAKCG ++ A ++F +
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
N+ +WN++I +A +L+ +M G D L ACTH + +G+ +
Sbjct: 494 NV-TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV- 551
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+ + L ++D+ + G +++A +V ++P SV+ L A N
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP--EWSVVSMNALIAGYSQNN 609
Query: 425 VELAEIAAESLFT 437
+E A + + + T
Sbjct: 610 LEEAVVLFQEMLT 622
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 151/340 (44%), Gaps = 42/340 (12%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
L+ M+ G++ + + G H+ IK A ++F AL+DMYA
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 153 KVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISG 212
K G LE AR++F+ M R+ TWN T+I
Sbjct: 475 KCGALEDARQIFERMCDRDNVTWN-------------------------------TIIGS 503
Query: 213 YSKNKQYEKALGLFLRME-CEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFF 271
Y +++ +A LF RM C I+ + LAS L AC ++ L G++V + K G
Sbjct: 504 YVQDENESEAFDLFKRMNLC--GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLD 561
Query: 272 KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQ 331
++L+ +++++MY+KCG I A +VF+ + ++ S N++I G + +A+ L+ +
Sbjct: 562 RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW-SVVSMNALIAGYS-QNNLEEAVVLFQE 619
Query: 332 MLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLG--- 388
ML G P ++TF ++ AC + G F T + E+ G + LLG
Sbjct: 620 MLTRGVNPSEITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLG--ISLLGMYM 676
Query: 389 RAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+ + EA + + V+W ++ S +G E A
Sbjct: 677 NSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 149/337 (44%), Gaps = 34/337 (10%)
Query: 160 ARRLFDEMPVR----------------------EVPTWNAMMAGHARFGDVDGALELFRL 197
+R++FDEMP R E NA++ +A+ V A + F
Sbjct: 61 SRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF 120
Query: 198 MPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
+ ++V +W +M+S YS + K L F+ + E I PN T + +L CA +E
Sbjct: 121 LE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSL-FENQIFPNKFTFSIVLSTCARETNVEF 178
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLA 317
G+++ K G +N Y A+++MYAKC I A RVF I +C W + G
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVC-WTCLFSGYV 237
Query: 318 VHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKL 377
G +A+ ++++M EG PD + FV ++ G ++ R +F M + P +
Sbjct: 238 KAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDV 292
Query: 378 EHYGCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGTLLGACSFHGNVELAEIA-AE 433
+ M+ G+ G A E M +K G++L A N++L + AE
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 434 SLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMK 470
++ N L ++Y+ ++ + AK+ + ++
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 225/356 (63%), Gaps = 20/356 (5%)
Query: 172 VPTWNAMMAGHARFGDVDGALELFRLMPSR-NVVSWTTMISGYSKNKQYEKALGLFLRME 230
+ +++ ++ GDVD A ++F P + N+V WT MIS Y++N+ +A+ LF RME
Sbjct: 100 IQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRME 159
Query: 231 CEEDIMPNAVTLASILPACANLGALEIGQRV--EAYARKNGFFKNLYVSNAVLEMYAKCG 288
E+ I + V + L ACA+LGA+++G+ + + RK +L + N++L MY K G
Sbjct: 160 AEK-IELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSG 218
Query: 289 HIDVAWRVFNEIGSLR-NLCSWNSMIMGLAVHGKCGKALELY------DQMLREGTTPDD 341
+ A ++F+E S+R ++ ++ SMI G A++G+ ++LEL+ DQ TP+D
Sbjct: 219 ETEKARKLFDE--SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPND 276
Query: 342 VTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQ 401
VTF+G+L+AC+H G+VE+G+ FKSM D+N+ P+ H+GCMVDL R+G L++A+E I
Sbjct: 277 VTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFIN 336
Query: 402 TMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDG 461
MP+KP++VIW TLLGACS HGNVEL E +F L+ + G+YV LSNIYAS WD
Sbjct: 337 QMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDE 396
Query: 462 VAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
+K+R ++ ++ G S++E G +++F+ S P +N+ ++ + E+ +
Sbjct: 397 KSKMRDRVRKRRM---PGKSWIELGSIINEFV----SGPDNNDEQLMMGEISEVLR 445
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 126/315 (40%), Gaps = 63/315 (20%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSP-NSTVFLYNKLLQAYXX 82
+QIH + G + + L+ + ++ YA+ V +P + L+ ++ AY
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTE 144
Query: 83 XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSG--FAPD 140
L+ +M + G+ +++ IK A D
Sbjct: 145 NENSVE-AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 141 VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPS 200
+ +LL+MY K G E AR+LFD E R
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFD---------------------------ESMR---- 232
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRMECEED-----IMPNAVTLASILPACANLGAL 255
++V ++T+MI GY+ N Q +++L LF +M+ + I PN VT +L AC++ G +
Sbjct: 233 KDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLV 292
Query: 256 EIGQRVEAYARKNGFFKNLYVS----------NAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
E G+R FK++ + +++++ + GH+ A N++ N
Sbjct: 293 EEGKR---------HFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 306 LCSWNSMIMGLAVHG 320
W +++ ++HG
Sbjct: 344 TVIWRTLLGACSLHG 358
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 2/170 (1%)
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLA 317
G+++ A RK GF + + +++ Y+ G +D A +VF+E +N+ W +MI
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 318 VHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF-KSMKTDFNIIPK 376
+ +A+EL+ +M E D V L AC G V+ G I+ +S+K +
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 377 LEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE 426
L ++++ ++G+ +A ++ M+ D + +++ + +G +
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDE-SMRKDVTTYTSMIFGYALNGQAQ 252
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 227/385 (58%), Gaps = 34/385 (8%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H +K+G+ DVF ++L+DMYAK G + AR++FDEMP R V TW+ MM G+A+
Sbjct: 135 GRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQ 194
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G+ + AL LF+ LF E++ N + +S
Sbjct: 195 MGENEEALWLFK--------------------------EALF------ENLAVNDYSFSS 222
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ CAN LE+G+++ + K+ F + +V ++++ +Y+KCG + A++VFNE+ ++
Sbjct: 223 VISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEV-PVK 281
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
NL WN+M+ A H K +EL+ +M G P+ +TF+ +L AC+H G+V++GR+ F
Sbjct: 282 NLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYF 341
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
MK + I P +HY +VD+LGRAG+L+EA EVI MP+ P +WG LL +C+ H N
Sbjct: 342 DQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKN 400
Query: 425 VELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
ELA AA+ +F L P + G ++ LSN YA+ +++ AK RK+++ K G S++E
Sbjct: 401 TELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVE 460
Query: 485 EGGQLHKFIVEDRSHPKSNEIFALL 509
E ++H F +R H KS EI+ L
Sbjct: 461 ERNKVHTFAAGERRHEKSKEIYEKL 485
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 205/361 (56%), Gaps = 6/361 (1%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +HAH +KS F + F ALLDMY K ++ AR+LFDE+P R WNAM++ +
Sbjct: 67 GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 185 FGDVDGALELFR---LMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
G V A+EL+ +MP N S+ +I G + F R E PN +T
Sbjct: 127 CGKVKEAVELYEAMDVMP--NESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLIT 184
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
L +++ AC+ +GA + + + +YA +N + + + ++E Y +CG I VF+ +
Sbjct: 185 LLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME 244
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
R++ +W+S+I A+HG AL+ + +M TPDD+ F+ +L AC+H G+ ++
Sbjct: 245 D-RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL 303
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
FK M+ D+ + +HY C+VD+L R G+ EAY+VIQ MP KP + WG LLGAC
Sbjct: 304 VYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRN 363
Query: 422 HGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHS 481
+G +ELAEIAA L +EP NP NYV+L IY S + + +LR MK S + S G S
Sbjct: 364 YGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Query: 482 F 482
+
Sbjct: 424 W 424
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 115/260 (44%), Gaps = 36/260 (13%)
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
++S T +S Y+ +E+AL LFL+M + +A + L +CA +G V
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
A++ K+ F N +V A+L+MY KC + A ++F+EI RN WN+MI GK
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQ-RNAVVWNAMISHYTHCGK 129
Query: 322 CGKALELYDQM------------------LREGT---------------TPDDVTFVGLL 348
+A+ELY+ M +G+ P+ +T + L+
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 349 LACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPD 408
AC+ G + I + I P + +V+ GR G + V +M + D
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNL-IEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR-D 247
Query: 409 SVIWGTLLGACSFHGNVELA 428
V W +L+ A + HG+ E A
Sbjct: 248 VVAWSSLISAYALHGDAESA 267
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 230/394 (58%), Gaps = 7/394 (1%)
Query: 128 LHAHFIKSGFAPDVFA---ATALLDMYAKVGTLELARRLFDEMPVRE-VPTWNAMMAGHA 183
+H + +K+G D ALLD YAK G +E A ++F + R + ++N++++G+
Sbjct: 454 VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 513
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
G D A LF M + ++ +W+ M+ Y+++ +A+G+F ++ + PN VT+
Sbjct: 514 NSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQ-ARGMRPNTVTIM 572
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
++LP CA L +L + ++ Y + G ++ + +L++YAKCG + A+ VF +
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQS-DAR 630
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
R+L + +M+ G AVHG+ +AL +Y M PD V +L AC H G+++ G I
Sbjct: 631 RDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQI 690
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ S++T + P +E Y C VDL+ R G+L +AY + MP++P++ IWGTLL AC+ +
Sbjct: 691 YDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYN 750
Query: 424 NVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
++L A L E + GN+V++SN+YA+ +W+GV +LR +MK ++ K AG S+L
Sbjct: 751 RMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWL 810
Query: 484 EEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
E GQ + F+ D SHP+ + IF L++ +Y K
Sbjct: 811 EVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 149/287 (51%), Gaps = 13/287 (4%)
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
N++++ + R G ++ A LF M S+++VSW +I+GY+ N ++ KA LF + + D+
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGF-FKNLYVSNAVLEMYAKCGHIDVAW 294
P++VT+ SILP CA L L G+ + +Y ++ + ++ V NA++ YA+ G A+
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
Query: 295 RVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
F+ + S +++ SWN+++ A K + L L +L E T D VT + LL C +
Sbjct: 387 WAFS-LMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINV 445
Query: 355 GMVEKGRHIFK-SMKTDF---NIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSV 410
+ K + + S+K PKL + ++D + G + A+++ + + V
Sbjct: 446 QGIGKVKEVHGYSVKAGLLHDEEEPKLGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLV 503
Query: 411 IWGTLLGACSFHGNVELAEIAAESLFT-LEPRNPGNYVILSNIYASA 456
+ +LL G+ + A++ LFT + + + ++ IYA +
Sbjct: 504 SYNSLLSGYVNSGSHDDAQM----LFTEMSTTDLTTWSLMVRIYAES 546
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 127/293 (43%), Gaps = 15/293 (5%)
Query: 135 SGFAPDVFAATALLDMYAKVGTLELARRL------FDEMPVREVPTWNAMMAGHARFGDV 188
SGF D ++ A V L R L + EV +++ +A+ +
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVS--KSVLNMYAKCRRM 72
Query: 189 DGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA 248
D ++FR M S + V W +++G S + E + F M ++ P++VT A +LP
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRE-TMRFFKAMHFADEPKPSSVTFAIVLPL 131
Query: 249 CANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHI-DVAWRVFNEIGSLRNLC 307
C LG G+ + +Y K G K+ V NA++ MYAK G I A+ F+ I +++
Sbjct: 132 CVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIAD-KDVV 190
Query: 308 SWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT---HGGMVEKGRHIF 364
SWN++I G + + A + ML+E T P+ T +L C GR I
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
+ + + +V R G++ EA + M K D V W ++
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNVVIA 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 170/449 (37%), Gaps = 85/449 (18%)
Query: 20 KNIGMNQVKQIHGYTLRTGIDQT-----KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYN 74
KNI +QIH Y ++ QT +L+ L + + A ++ + + +N
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298
Query: 75 KLLQAYXXXXXXXXXCFSLYSQMRLLGH-SPNQYXXXXXXXXXXXXXXXXXGQMLHAHFI 133
++ Y F L+ + G SP+ G+ +H++ +
Sbjct: 299 VVIAGYASNCEWFKA-FQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 134 KSGFA-PDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGAL 192
+ + D AL+ YA+ G A F M +++ +WNA+ L
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAI-------------L 404
Query: 193 ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANL 252
+ F P KQ++ L E I ++VT+ S+L C N+
Sbjct: 405 DAFADSP-----------------KQFQ--FLNLLHHLLNEAITLDSVTILSLLKFCINV 445
Query: 253 GALEIGQRVEAYARKNGFFKN---LYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSW 309
+ + V Y+ K G + + NA+L+ YAKCG+++ A ++F + R L S+
Sbjct: 446 QGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSY 505
Query: 310 NSMIMGLAVHGKCGKALELYDQM---------------------------LRE----GTT 338
NS++ G G A L+ +M RE G
Sbjct: 506 NSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Query: 339 PDDVTFVGLLLACTHGGMVEKGR----HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLR 394
P+ VT + LL C + R +I + D + G ++D+ + G L+
Sbjct: 566 PNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRL------KGTLLDVYAKCGSLK 619
Query: 395 EAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
AY V Q+ + D V++ ++ + HG
Sbjct: 620 HAYSVFQS-DARRDLVMFTAMVAGYAVHG 647
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 28/258 (10%)
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ ACA++ L G+ + K G VS +VL MYAKC +D ++F ++ SL
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 305 NLCSWNSMIMGLAVHGKCGK-ALELYDQM-LREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
+ WN ++ GL+V CG+ + + M + P VTF +L C G G
Sbjct: 87 PVV-WNIVLTGLSV--SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG-- 141
Query: 363 IFKSMKTDFNIIPKLEHY----GCMVDLLGRAGKL-REAYEVIQTMPMKPDSVIWGTLLG 417
KSM + + I LE +V + + G + +AY + K D V W ++
Sbjct: 142 --KSMHS-YIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADK-DVVSWNAIIA 197
Query: 418 ACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKS 477
S N+ + L EP P NY ++N+ D R G QI
Sbjct: 198 GFS-ENNMMADAFRSFCLMLKEPTEP-NYATIANVLPVCASMDKNIACR---SGRQI--- 249
Query: 478 AGHSFLEEGG--QLHKFI 493
HS++ + Q H F+
Sbjct: 250 --HSYVVQRSWLQTHVFV 265
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 152/477 (31%), Positives = 239/477 (50%), Gaps = 41/477 (8%)
Query: 12 STLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHH-SP 66
S L N K + + Q K HG+ +R T+ LL + L A+ + S
Sbjct: 335 SCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISE 394
Query: 67 NSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQ 126
+N +L+ Y C L+ +++ LG + G+
Sbjct: 395 EGNKEAWNTMLKGYGKMKCHVK-CIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGK 453
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG 186
LH + +K+ + +L+D+Y K+G L +A R+F E
Sbjct: 454 SLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-------------------- 493
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
NV++W MI+ Y +Q EKA+ LF RM E+ P+++TL ++L
Sbjct: 494 ------------ADTNVITWNAMIASYVHCEQSEKAIALFDRM-VSENFKPSSITLVTLL 540
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
AC N G+LE GQ + Y + NL +S A+++MYAKCGH++ + +F+ G+ ++
Sbjct: 541 MACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA-GNQKDA 599
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
WN MI G +HG A+ L+DQM P TF+ LL ACTH G+VE+G+ +F
Sbjct: 600 VCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLK 659
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE 426
M +++ P L+HY C+VDLL R+G L EA + +MP PD VIWGTLL +C HG E
Sbjct: 660 MH-QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFE 718
Query: 427 LAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
+ AE +P+N G Y++L+N+Y++A +W+ + R++M+ S + K AGHS +
Sbjct: 719 MGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 189/454 (41%), Gaps = 80/454 (17%)
Query: 20 KNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI------PNLHYAQAVLHHSPNSTVFLY 73
+++ + +++ + + G+ + + KL+ PNL + V H +FL+
Sbjct: 36 QSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNL--SSRVFHLVTRRDIFLW 93
Query: 74 NKLLQA-YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHF 132
N +++A + CF + M L G SP+ + G +H
Sbjct: 94 NSIIKAHFSNGDYARSLCF--FFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 133 IK-SGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGA 191
+K GF + + + Y+K G L+ A +FDEMP
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP----------------------- 188
Query: 192 LELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECE-EDI-MPNAVTLASILPAC 249
R+VV+WT +ISG+ +N + E LG +M D+ PN TL AC
Sbjct: 189 --------DRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQAC 240
Query: 250 ANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSW 309
+NLGAL+ G+ + +A KNG + +V +++ Y+K G+ A+ F E+G ++ SW
Sbjct: 241 SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGD-EDMFSW 299
Query: 310 NSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKG--------R 361
S+I LA G ++ +++ +M +G PD V L+ +V +G R
Sbjct: 300 TSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIR 359
Query: 362 HIFK----------SMKTDFNIIPKLEHYGCMVD----------LLGRAGKLR------E 395
H F SM F ++ E C + +L GK++ E
Sbjct: 360 HCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIE 419
Query: 396 AYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAE 429
+ IQ + ++ DS +++ +CS G V L +
Sbjct: 420 LFRKIQNLGIEIDSASATSVISSCSHIGAVLLGK 453
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 130/298 (43%), Gaps = 43/298 (14%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ LH +K+G A F +++ Y+K G A F E+
Sbjct: 249 GRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL----------------- 291
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
GD D + SWT++I+ +++ E++ +F M+ + + P+ V ++
Sbjct: 292 -GDED-------------MFSWTSIIASLARSGDMEESFDMFWEMQ-NKGMHPDGVVISC 336
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ + + G+ + ++ F + V N++L MY K + VA ++F I
Sbjct: 337 LINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEG 396
Query: 305 NLCSWNSMIMG---LAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
N +WN+M+ G + H KC +EL+ ++ G D + ++ +C+H G V G+
Sbjct: 397 NKEAWNTMLKGYGKMKCHVKC---IELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGK 453
Query: 362 HIF-KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
+ +KT ++ + ++DL G+ G L A+ + + + W ++ +
Sbjct: 454 SLHCYVVKTSLDLTISV--VNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAMIAS 507
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 219/384 (57%), Gaps = 37/384 (9%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G LH ++SGF DV L+D Y K + + +F EM
Sbjct: 228 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG---------------- 271
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNA-VTLA 243
++N VSW ++++ Y +N + EKA L+LR +DI+ + ++
Sbjct: 272 ---------------TKNAVSWCSLVAAYVQNHEDEKASVLYLR--SRKDIVETSDFMIS 314
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
S+L ACA + LE+G+ + A+A K + ++V +A+++MY KCG I+ + + F+E+
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE- 373
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGT--TPDDVTFVGLLLACTHGGMVEKGR 361
+NL + NS+I G A G+ AL L+++M G TP+ +TFV LL AC+ G VE G
Sbjct: 374 KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM 433
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
IF SM++ + I P EHY C+VD+LGRAG + AYE I+ MP++P +WG L AC
Sbjct: 434 KIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRM 493
Query: 422 HGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHS 481
HG +L +AAE+LF L+P++ GN+V+LSN +A+A +W +R+ +KG I K AG+S
Sbjct: 494 HGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYS 553
Query: 482 FLEEGGQLHKFIVEDRSHPKSNEI 505
++ Q+H F +DRSH + EI
Sbjct: 554 WITVKNQVHAFQAKDRSHILNKEI 577
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 183/443 (41%), Gaps = 51/443 (11%)
Query: 58 AQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXX 117
A+ VL +P V + L+ + +MR G PN +
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFF-EMRREGVVPNDFTFPCAFKAVA 119
Query: 118 XXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNA 177
G+ +HA +K G DVF + DMY K + AR+LFDE+P R + TWNA
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179
Query: 178 MMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
++ G A+E F + R + D P
Sbjct: 180 FISNSVTDGRPREAIEAF--IEFRRI------------------------------DGHP 207
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
N++T + L AC++ L +G ++ ++GF ++ V N +++ Y KC I + +F
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 298 NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMV 357
E+G+ +N SW S++ + + KA LY + ++ D +L AC +
Sbjct: 268 TEMGT-KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGL 326
Query: 358 EKGRHIFK-SMKTDFNIIPKLEHYG-CMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTL 415
E GR I ++K + + G +VD+ G+ G + ++ + MP K + V +L
Sbjct: 327 ELGRSIHAHAVKA---CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSL 382
Query: 416 LGACSFHGNVELAEIAAESLFTLEPRNPG---NYVILSNIYASADQWDGVAKLRKVMKGS 472
+G + G V++A E + PR G NY+ ++ ++ + V K+
Sbjct: 383 IGGYAHQGQVDMALALFEE---MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
Query: 473 QITKSAGHSFLEEGGQLHKFIVE 495
+ T +E G + + IV+
Sbjct: 440 RSTYG-----IEPGAEHYSCIVD 457
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 46/300 (15%)
Query: 125 GQMLHAHFIKS-GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA 183
G+++HA +K+ P F A L++MY+K+ E AR +
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVL------------------- 65
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
RL P+RNVVSWT++ISG ++N + AL F M E ++PN T
Sbjct: 66 ------------RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMR-REGVVPNDFTFP 112
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
A A+L G+++ A A K G +++V + +MY K D A ++F+EI
Sbjct: 113 CAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE- 171
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT-----HGGMVE 358
RNL +WN+ I G+ +A+E + + R P+ +TF L AC+ + GM
Sbjct: 172 RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQL 231
Query: 359 KGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
G + TD ++ L +D G+ ++R + E+I T ++V W +L+ A
Sbjct: 232 HGLVLRSGFDTDVSVCNGL------IDFYGKCKQIRSS-EIIFTEMGTKNAVSWCSLVAA 284
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 254/491 (51%), Gaps = 46/491 (9%)
Query: 28 KQIHGYTLRTGIDQ----TKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
K+IHGY +R+G D + L++ + +L A+ + V +N ++ AY
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY--- 312
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
+ +P + ++ + G P +
Sbjct: 313 ---------------VQNENPKE------------------AMLIFQKMLDEGVKPTDVS 339
Query: 144 ATALLDMYAKVGTLELAR---RLFDEMPV-REVPTWNAMMAGHARFGDVDGALELFRLMP 199
L A +G LE R +L E+ + R V N++++ + + +VD A +F +
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
SR +VSW MI G+++N + AL F +M + P+ T S++ A A L +
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMR-SRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
+ ++ KN++V+ A+++MYAKCG I +A +F+ + S R++ +WN+MI G H
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM-SERHVTTWNAMIDGYGTH 517
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G ALEL+++M + P+ VTF+ ++ AC+H G+VE G F MK +++I ++H
Sbjct: 518 GFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDH 577
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
YG MVDLLGRAG+L EA++ I MP+KP ++G +LGAC H NV AE AAE LF L
Sbjct: 578 YGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 637
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSH 499
P + G +V+L+NIY +A W+ V ++R M + K+ G S +E ++H F +H
Sbjct: 638 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 697
Query: 500 PKSNEIFALLD 510
P S +I+A L+
Sbjct: 698 PDSKKIYAFLE 708
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 168/347 (48%), Gaps = 40/347 (11%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQA 79
+ +++QI + G+ Q KL+ + ++ A V + LY+ +L+
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109
Query: 80 YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
+ + +MR P Y G+ +H +KSGF+
Sbjct: 110 FAKVSDLDK-ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
D+FA T L +MYAK + AR++FD M P
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRM-------------------------------P 197
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
R++VSW T+++GYS+N AL + M CEE++ P+ +T+ S+LPA + L + +G+
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSM-CEENLKPSFITIVSVLPAVSALRLISVGK 256
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL-RNLCSWNSMIMGLAV 318
+ YA ++GF + +S A+++MYAKCG ++ A ++F+ G L RN+ SWNSMI
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD--GMLERNVVSWNSMIDAYVQ 314
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK 365
+ +A+ ++ +ML EG P DV+ +G L AC G +E+GR I K
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/501 (31%), Positives = 248/501 (49%), Gaps = 65/501 (12%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEIPN-----------LHYAQAVLHHSPNSTVFLYNKL 76
+QIHG ++ G E LLE+ N L ++V H V + +
Sbjct: 296 RQIHGLCIKRGY-------ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTM 348
Query: 77 LQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSG 136
+ + S++ MR G PN+ G +H IK+G
Sbjct: 349 ISS------NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTG 402
Query: 137 FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFR 196
F + + + +YAK LE A++ F+++ RE+ +WNAM+
Sbjct: 403 FVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI----------------- 445
Query: 197 LMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALE 256
SG+++N +AL +FL E MPN T S+L A A +
Sbjct: 446 --------------SGFAQNGFSHEALKMFLSAAAE--TMPNEYTFGSVLNAIAFAEDIS 489
Query: 257 I--GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIM 314
+ GQR A+ K G VS+A+L+MYAK G+ID + +VFNE+ S +N W S+I
Sbjct: 490 VKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM-SQKNQFVWTSIIS 548
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
+ HG + L+ +M++E PD VTF+ +L AC GMV+KG IF M +N+
Sbjct: 549 AYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLE 608
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAES 434
P EHY CMVD+LGRAG+L+EA E++ +P P + ++LG+C HGNV++ AE
Sbjct: 609 PSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAEL 668
Query: 435 LFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGG-----QL 489
++P G+YV + NIYA ++WD A++RK M+ ++K AG S+++ G +
Sbjct: 669 AMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTM 728
Query: 490 HKFIVEDRSHPKSNEIFALLD 510
F D+SHPKS+EI+ +++
Sbjct: 729 QGFSSGDKSHPKSDEIYRMVE 749
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 126/249 (50%), Gaps = 10/249 (4%)
Query: 172 VPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMEC 231
V NA+M + + G D AL +F + +VVSW T++SG+ N + AL +RM+
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMK- 166
Query: 232 EEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHID 291
++ +A T ++ L C +G ++++ K G +L V N+ + MY++ G
Sbjct: 167 SAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFR 226
Query: 292 VAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG-KALELYDQMLREGTTPDDVTFVGLLLA 350
A RVF+E+ S +++ SWNS++ GL+ G G +A+ ++ M+REG D V+F ++
Sbjct: 227 GARRVFDEM-SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITT 285
Query: 351 CTHGGMVEKGRHIFK-SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDS 409
C H ++ R I +K + + LE ++ + G L V M + +
Sbjct: 286 CCHETDLKLARQIHGLCIKRGYESL--LEVGNILMSRYSKCGVLEAVKSVFHQMSER-NV 342
Query: 410 VIWGTLLGA 418
V W T++ +
Sbjct: 343 VSWTTMISS 351
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 138/301 (45%), Gaps = 43/301 (14%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G L + +K+G D+ + + MY++ G+ ARR+FDEM +++ +WN++++G ++
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 185 FGDVD-GALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
G A+ +FR M E + + V+
Sbjct: 253 EGTFGFEAVVIFRDM--------------------------------MREGVELDHVSFT 280
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
S++ C + L++ +++ K G+ L V N ++ Y+KCG ++ VF+++ S
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQM-SE 339
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
RN+ SW +MI A+ ++ M +G P++VTFVGL+ A +++G I
Sbjct: 340 RNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Query: 364 FK-SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
+KT F P + + + L + L +A + + + + + + W ++ + +
Sbjct: 395 HGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFR-EIISWNAMISGFAQN 451
Query: 423 G 423
G
Sbjct: 452 G 452
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 8/186 (4%)
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
+ VTL L AC G L+ G ++ ++ +GF + VSNAV+ MY K G D A +F
Sbjct: 77 DEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 298 NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMV 357
+ ++ SWN+++ G + AL +M G D T+ L C
Sbjct: 135 ENLVD-PDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGF 190
Query: 358 EKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
G + +S + L + + R+G R A V M K D + W +LL
Sbjct: 191 LLGLQL-QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLS 248
Query: 418 ACSFHG 423
S G
Sbjct: 249 GLSQEG 254
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 236/462 (51%), Gaps = 39/462 (8%)
Query: 30 IHGYTLRTGIDQ----TKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXX 85
IHG ++ G+D+ +L+E ++ + AQ V P L+ L++ Y
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 86 XXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV-FAA 144
F L+ MR G + + G+ +H I+ F +
Sbjct: 191 DPEV-FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
+++DMY K L+ AR+LF+ VD RNVV
Sbjct: 250 ASIIDMYVKCRLLDNARKLFET--------------------SVD-----------RNVV 278
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
WTT+ISG++K ++ +A LF +M E I+PN TLA+IL +C++LG+L G+ V Y
Sbjct: 279 MWTTLISGFAKCERAVEAFDLFRQM-LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGY 337
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
+NG + + ++MYA+CG+I +A VF+ + RN+ SW+SMI ++G +
Sbjct: 338 MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPE-RNVISWSSMINAFGINGLFEE 396
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMV 384
AL+ + +M + P+ VTFV LL AC+H G V++G F+SM D+ ++P+ EHY CMV
Sbjct: 397 ALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMV 456
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPG 444
DLLGRAG++ EA I MP+KP + WG LL AC H V+LA AE L ++EP
Sbjct: 457 DLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSS 516
Query: 445 NYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEG 486
YV+LSNIYA A W+ V +R+ M K G S E G
Sbjct: 517 VYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEVG 558
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 198/450 (44%), Gaps = 86/450 (19%)
Query: 24 MNQVKQIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHHSP--NSTVFLYNKLL 77
+N +Q+H + G + +L ++ L +A + + P +N +L
Sbjct: 20 LNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTIL 79
Query: 78 QAYXXXXXXXXXCFS----LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFI 133
Y C+S LY++MR + + G ++H +
Sbjct: 80 SGYSKSKTC---CYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAM 136
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALE 193
K+G D + A +L++MYA++GT+E A+++FDE+PVR W +M G+ ++
Sbjct: 137 KNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFR 196
Query: 194 LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
LF LM + GL L +A+TL ++ AC N+
Sbjct: 197 LFCLM----------------------RDTGLAL----------DALTLICLVKACGNVF 224
Query: 254 ALEIGQRVEAYARKNGFF-KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSM 312
A ++G+ V + + F ++ Y+ ++++MY KC +D A ++F E RN+ W ++
Sbjct: 225 AGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF-ETSVDRNVVMWTTL 283
Query: 313 IMGLAVHGKCGKALELYD---QMLREGTTPDDVTFVGLLLACT-----------HGGMVE 358
I G A KC +A+E +D QMLRE P+ T +L++C+ HG M+
Sbjct: 284 ISGFA---KCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIR 340
Query: 359 KGRHI----FKSM-------------KTDFNIIPK--LEHYGCMVDLLGRAGKLREAYEV 399
G + F S +T F+++P+ + + M++ G G EA +
Sbjct: 341 NGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDC 400
Query: 400 IQTMPMK---PDSVIWGTLLGACSFHGNVE 426
M + P+SV + +LL ACS GNV+
Sbjct: 401 FHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 133/312 (42%), Gaps = 39/312 (12%)
Query: 28 KQIHGYTLRTG-IDQTK----TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
K +HG ++R IDQ+ ++I+ ++ L A+ + S + V ++ L+ +
Sbjct: 230 KCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAK 289
Query: 83 XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVF 142
F L+ QM PNQ G+ +H + I++G D
Sbjct: 290 CERAVEA-FDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAV 348
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRN 202
T+ +DMYA+ G +++AR +FD MP R V +W++M+ G + AL+ F M S+N
Sbjct: 349 NFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQN 408
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG-QRV 261
VV PN+VT S+L AC++ G ++ G ++
Sbjct: 409 VV--------------------------------PNSVTFVSLLSACSHSGNVKEGWKQF 436
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
E+ R G ++++ + G I A + + +W +++ +H +
Sbjct: 437 ESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKE 496
Query: 322 CGKALELYDQML 333
A E+ +++L
Sbjct: 497 VDLAGEIAEKLL 508
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 203/345 (58%), Gaps = 2/345 (0%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
D + ++D Y V +E A LF EMP R+ +WN M++G+A G+V+ A F P
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTP 370
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
++ VSW ++I+ Y KNK Y++A+ LF+RM E + P+ TL S+L A L L +G
Sbjct: 371 EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGE-KPDPHTLTSLLSASTGLVNLRLGM 429
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
++ K ++ V NA++ MY++CG I + R+F+E+ R + +WN+MI G A H
Sbjct: 430 QMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFH 488
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G +AL L+ M G P +TFV +L AC H G+V++ + F SM + + I P++EH
Sbjct: 489 GNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEH 548
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
Y +V++ G+ EA +I +MP +PD +WG LL AC + NV LA +AAE++ LE
Sbjct: 549 YSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLE 608
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
P + YV+L N+YA WD +++R M+ +I K G S+++
Sbjct: 609 PESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 156/364 (42%), Gaps = 57/364 (15%)
Query: 140 DVFAATALLDMYAKVGT---LELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFR 196
DV ++ Y G LE AR+LFDEMP R+ +WN M++G+A+ + AL LF
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFE 160
Query: 197 LMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALE 256
MP RN VSW+ MI+G+ +N + + A+ LF +M ++ P CA + L
Sbjct: 161 KMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSS-----------PLCALVAGLI 209
Query: 257 IGQRVEAYARKNGFFKNL--------YVSNAVLEMYAKCGHIDVAWRVFNEIGSL----- 303
+R+ A G + +L Y N ++ Y + G ++ A +F++I L
Sbjct: 210 KNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDH 269
Query: 304 ---------RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
+N+ SWNSMI G A L+DQM D +++ ++ H
Sbjct: 270 GGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM----KDRDTISWNTMIDGYVHV 325
Query: 355 GMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGT 414
+E +F M + MV G + A + P K +V W +
Sbjct: 326 SRMEDAFALFSEMPNR-----DAHSWNMMVSGYASVGNVELARHYFEKTPEK-HTVSWNS 379
Query: 415 LLGACSFHGNVELAEIAAESLF---TLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKG 471
++ A + N + E A LF +E P + + S + AS G+ LR M+
Sbjct: 380 IIAA--YEKNKDYKE--AVDLFIRMNIEGEKPDPHTLTSLLSAST----GLVNLRLGMQM 431
Query: 472 SQIT 475
QI
Sbjct: 432 HQIV 435
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 135/310 (43%), Gaps = 60/310 (19%)
Query: 135 SGFAPDVFAATALLDMYAKVGTLELARRLFDEMP---------------VREVPTWNAMM 179
SG V+A L+ Y + G +E AR LFD++P + V +WN+M+
Sbjct: 229 SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMI 288
Query: 180 AGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNA 239
+ + GDV A LF M R+ +SW TMI GY + E A LF MPN
Sbjct: 289 KAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSE-------MPN- 340
Query: 240 VTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE 299
++ + N ++ YA G++++A R + E
Sbjct: 341 --------------------------------RDAHSWNMMVSGYASVGNVELA-RHYFE 367
Query: 300 IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEK 359
++ SWNS+I + +A++L+ +M EG PD T LL A T +
Sbjct: 368 KTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRL 427
Query: 360 GRHIFK-SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
G + + +KT +IP + + ++ + R G++ E+ + M +K + + W ++G
Sbjct: 428 GMQMHQIVVKT---VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG 484
Query: 419 CSFHGNVELA 428
+FHGN A
Sbjct: 485 YAFHGNASEA 494
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 7/210 (3%)
Query: 52 IPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXX 111
+ N+ A+ +P +N ++ AY L+ +M + G P+ +
Sbjct: 356 VGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKE-AVDLFIRMNIEGEKPDPHTLTS 414
Query: 112 XXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPV-R 170
G +H +K+ PDV AL+ MY++ G + +RR+FDEM + R
Sbjct: 415 LLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR 473
Query: 171 EVPTWNAMMAGHARFGDVDGALELFRLMPSRNV----VSWTTMISGYSKNKQYEKALGLF 226
EV TWNAM+ G+A G+ AL LF M S + +++ ++++ + ++A F
Sbjct: 474 EVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQF 533
Query: 227 LRMECEEDIMPNAVTLASILPACANLGALE 256
+ M I P +S++ + G E
Sbjct: 534 VSMMSVYKIEPQMEHYSSLVNVTSGQGQFE 563
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 235/463 (50%), Gaps = 28/463 (6%)
Query: 25 NQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
NQ+KQIH L + L S T +YN L+++Y
Sbjct: 28 NQIKQIHTVLLTSN----------------------ALVASRWKTKCVYNTLIRSYLTTG 65
Query: 85 XXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAA 144
+L++ M PN G LH +K GF D F
Sbjct: 66 EYKTS-LALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQ 124
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
T+ + Y +VG LE +R++FD++ V N+++ R G++D A E F+ MP +VV
Sbjct: 125 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 184
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEED--IMPNAVTLASILPACANL--GALEIGQR 260
SWTT+I+G+SK + KAL +F M E I PN T S+L +CAN G + +G++
Sbjct: 185 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQ 244
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
+ Y + A+L+MY K G +++A +F++I + +C+WN++I LA +G
Sbjct: 245 IHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD-KKVCAWNAIISALASNG 303
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
+ +ALE+++ M P+ +T + +L AC +V+ G +F S+ +++ IIP EHY
Sbjct: 304 RPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHY 363
Query: 381 GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEP 440
GC+VDL+GRAG L +A IQ++P +PD+ + G LLGAC H N EL + L L+P
Sbjct: 364 GCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQP 423
Query: 441 RNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
++ G YV LS A W K+RK M + I K +S L
Sbjct: 424 QHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 234/391 (59%), Gaps = 35/391 (8%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ HA I+ G + + L+DMY+K G + ++++LF+ +G+A
Sbjct: 438 GKQTHAFLIRQGIQFEGMN-SYLIDMYSKSGLIRISQKLFEG-------------SGYAE 483
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
R+ +W +MISGY++N EK +F +M E++I PNAVT+AS
Sbjct: 484 ----------------RDQATWNSMISGYTQNGHTEKTFLVFRKM-LEQNIRPNAVTVAS 526
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
ILPAC+ +G++++G+++ ++ + +N++V++A+++MY+K G I A +F++ R
Sbjct: 527 ILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE-R 585
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
N ++ +MI+G HG +A+ L+ M G PD +TFV +L AC++ G++++G IF
Sbjct: 586 NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIF 645
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPD-SVIWGTLLGACSFHG 423
+ M+ +NI P EHY C+ D+LGR G++ EAYE ++ + + + + +WG+LLG+C HG
Sbjct: 646 EEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHG 705
Query: 424 NVELAEIAAESLFTLEP-RNPGNY-VILSNIYASADQWDGVAKLRKVMKGSQITKSAGHS 481
+ELAE +E L + +N Y V+LSN+YA +W V K+R+ M+ + K G S
Sbjct: 706 ELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRS 765
Query: 482 FLEEGGQLHKFIVEDRSHPKSNEIFALLDGV 512
+E G ++ F+ D+ HP S+EI+ ++DG+
Sbjct: 766 GIEIAGYVNCFVSRDQEHPHSSEIYDVIDGL 796
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 159/339 (46%), Gaps = 9/339 (2%)
Query: 140 DVFAATALLDMYAKVGTLE-LARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLM 198
+VF A ++ K L +L DE V+++ ++ ++ +A GD++ + +F
Sbjct: 219 NVFPAVSISRSIKKANVFYGLMLKLGDEY-VKDLFVVSSAISMYAELGDIESSRRVFDSC 277
Query: 199 PSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG 258
RN+ W TMI Y +N +++ LFL ++I+ + VT A + L +E+G
Sbjct: 278 VERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELG 337
Query: 259 QRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAV 318
++ + KN + + N+++ MY++CG + ++ VF + R++ SWN+MI
Sbjct: 338 RQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE-RDVVSWNTMISAFVQ 396
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLE 378
+G + L L +M ++G D +T LL A ++ E G+ + +
Sbjct: 397 NGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMN 456
Query: 379 HYGCMVDLLGRAGKLREAYEVIQ-TMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFT 437
Y ++D+ ++G +R + ++ + + + D W +++ + +G+ E + +
Sbjct: 457 SY--LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM-- 512
Query: 438 LEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITK 476
LE N V +++I + Q G L K + G I +
Sbjct: 513 LEQNIRPNAVTVASILPACSQI-GSVDLGKQLHGFSIRQ 550
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 10/255 (3%)
Query: 171 EVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRME 230
+ P+ + ++ + G+ A +LF +P V W T+I G+ N +AL + RM+
Sbjct: 38 QTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK 97
Query: 231 CEEDIMP-NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGH 289
+A T +S L ACA L+ G+ V + + + V N+++ MY C +
Sbjct: 98 KTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN 157
Query: 290 I------DVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
DV +VF+ + +N+ +WN++I G+ +A + M+R P V+
Sbjct: 158 APDCFEYDVVRKVFDNM-RRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVS 216
Query: 344 FVGLLLACTHGGMVEKGRHIFKSM-KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQT 402
FV + A + ++K + M K + L + + G + + V +
Sbjct: 217 FVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDS 276
Query: 403 MPMKPDSVIWGTLLG 417
++ + +W T++G
Sbjct: 277 C-VERNIEVWNTMIG 290
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 147/497 (29%), Positives = 249/497 (50%), Gaps = 45/497 (9%)
Query: 19 SKNIGMNQVKQIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHHSPN-STVFLY 73
S + ++ VK++HG + G D L+ + ++ AQ V P+ L+
Sbjct: 171 SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLW 230
Query: 74 NKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFI 133
N L+ Y ++S+MR G +++ G+ +H +
Sbjct: 231 NALVNGYSQIFRFEDALL-VFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAV 289
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALE 193
K+G D+ + AL+DMY K LE A +F+ M
Sbjct: 290 KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD------------------------- 324
Query: 194 LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
R++ +W +++ + ++ L LF RM C I P+ VTL ++LP C L
Sbjct: 325 ------ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS-GIRPDIVTLTTVLPTCGRLA 377
Query: 254 ALEIGQRVEAYARKNGFF----KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSW 309
+L G+ + Y +G N ++ N++++MY KCG + A VF+ + +++ SW
Sbjct: 378 SLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSM-RVKDSASW 436
Query: 310 NSMIMGLAVHGKCGK-ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMK 368
N MI G V CG+ AL+++ M R G PD++TFVGLL AC+H G + +GR+ M+
Sbjct: 437 NIMINGYGVQ-SCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQME 495
Query: 369 TDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
T +NI+P +HY C++D+LGRA KL EAYE+ + P+ + V+W ++L +C HGN +LA
Sbjct: 496 TVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLA 555
Query: 429 EIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQ 488
+A + L LEP + G YV++SN+Y A +++ V +R M+ + K+ G S++
Sbjct: 556 LVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNG 615
Query: 489 LHKFIVEDRSHPKSNEI 505
+H F +++HP+ I
Sbjct: 616 VHTFFTGNQTHPEFKSI 632
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 39/302 (12%)
Query: 125 GQMLHAHFIKSGFAPDV-FAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA 183
GQ +H ++ GF D A T+L++MYAK G + A +F
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVF------------------- 119
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
G E R+V + +ISG+ N A+ + M I+P+ T
Sbjct: 120 ------GGSE-------RDVFGYNALISGFVVNGSPLDAMETYREMRAN-GILPDKYTFP 165
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
S+L + ++ ++V A K GF + YV + ++ Y+K ++ A +VF+E+
Sbjct: 166 SLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDR 224
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
+ WN+++ G + + AL ++ +M EG T +L A T G ++ GR I
Sbjct: 225 DDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSI 284
Query: 364 FK-SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
++KT + ++D+ G++ L EA + + M + D W ++L +
Sbjct: 285 HGLAVKTGSG--SDIVVSNALIDMYGKSKWLEEANSIFEAMDER-DLFTWNSVLCVHDYC 341
Query: 423 GN 424
G+
Sbjct: 342 GD 343
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 9/186 (4%)
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNL-YVSNAVLEMYAKCGHIDVAWRV 296
N T + L CA GQ++ + + GF + +++ MYAKCG + A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 297 FNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGM 356
F GS R++ +N++I G V+G A+E Y +M G PD TF LL G
Sbjct: 119 FG--GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLL----KGSD 172
Query: 357 VEKGRHIFKSMKTDFNIIPKLEHY--GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGT 414
+ + K F + + Y +V + + +A +V +P + DSV+W
Sbjct: 173 AMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNA 232
Query: 415 LLGACS 420
L+ S
Sbjct: 233 LVNGYS 238
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 227/412 (55%), Gaps = 33/412 (8%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELAR----------------------- 161
G +H + D+F +L+ MY+K+G + A+
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQ 353
Query: 162 --------RLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGY 213
LF++MP +++ +W M+ G + G++ +ELF +MP ++ ++WT MIS +
Sbjct: 354 RKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 214 SKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKN 273
N YE+AL F +M ++++ PN+ T +S+L A A+L L G ++ K +
Sbjct: 414 VSNGYYEEALCWFHKM-LQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Query: 274 LYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQML 333
L V N+++ MY KCG+ + A+++F+ I S N+ S+N+MI G + +G KAL+L+ +
Sbjct: 473 LSVQNSLVSMYCKCGNTNDAYKIFSCI-SEPNIVSYNTMISGYSYNGFGKKALKLFSMLE 531
Query: 334 REGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKL 393
G P+ VTF+ LL AC H G V+ G FKSMK+ +NI P +HY CMVDLLGR+G L
Sbjct: 532 SSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLL 591
Query: 394 REAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIY 453
+A +I TMP KP S +WG+LL A H V+LAE+AA+ L LEP + YV+LS +Y
Sbjct: 592 DDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLY 651
Query: 454 ASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEI 505
+ + ++ + K +I K G S++ G++H F+ D S EI
Sbjct: 652 SIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 137/282 (48%), Gaps = 13/282 (4%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
D A+ LL Y + G A R+F M V+EV + ++M+ G+ + G + A LF M
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
RNV++WT MI GY K +E GLFLRM E D+ N+ TLA + AC + G
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
++ + +L++ N+++ MY+K G++ A VF + + ++ SWNS+I GL
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN-KDSVSWNSLITGLVQR 354
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
+ +A EL+++M D V++ ++ + G + K +F M NI
Sbjct: 355 KQISEAYELFEKM----PGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT----- 405
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLLGA 418
+ M+ G EA M K P+S + ++L A
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 22/283 (7%)
Query: 141 VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG-DVDGALELFRLMP 199
+ + A++ YA+ G + A ++FDEMPVR ++NAM+ + D+ A ELF +P
Sbjct: 81 IVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP 140
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECE-EDIMPNAVTLASILPACANLGALEIG 258
+N VS+ TMI+G+ + ++++A L+ + D + + V L+ G L G
Sbjct: 141 EKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLS---------GYLRAG 191
Query: 259 QRVEAYARKNGF-FKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLA 317
+ EA G K + ++++ Y K G I A +F+ + + RN+ +W +MI G
Sbjct: 192 KWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRM-TERNVITWTAMIDGYF 250
Query: 318 VHGKCGKALELYDQMLREGTTP-DDVTFVGLLLACTHGGMVEKGRHI---FKSMKTDFNI 373
G L+ +M +EG + T + AC +G I M +F++
Sbjct: 251 KAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDL 310
Query: 374 IPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
++ + + G + EA V M K DSV W +L+
Sbjct: 311 FLG----NSLMSMYSKLGYMGEAKAVFGVMKNK-DSVSWNSLI 348
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 35/270 (12%)
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
N+ ++ HAR G++ A +FR M +R++VSW MIS Y++N + KA +F M
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 236 MPNAVTLASILPACANLG-------------ALEIGQRVEAYARKNGF------------ 270
NA+ A I C +LG A+ + + R F
Sbjct: 114 SYNAMITAMIKNKC-DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPV 172
Query: 271 -FKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELY 329
F++ SN +L Y + G + A RVF + +++ + S +SM+ G G+ A L+
Sbjct: 173 KFRDSVASNVLLSGYLRAGKWNEAVRVFQGM-AVKEVVSCSSMVHGYCKMGRIVDARSLF 231
Query: 330 DQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGR 389
D+M T + +T+ ++ G E G +F M+ + ++ M
Sbjct: 232 DRM----TERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 390 AGKLREAYEV---IQTMPMKPDSVIWGTLL 416
+ RE ++ + MP++ D + +L+
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLM 317
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 222/421 (52%), Gaps = 33/421 (7%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
L+S MR PN GQ +HA K G ++ +AL+DMY+
Sbjct: 243 LFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYS 302
Query: 153 KVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISG 212
K G++E A W +F + VS T ++ G
Sbjct: 303 KCGSIEDA--------------WT-----------------IFESTTEVDEVSMTVILVG 331
Query: 213 YSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFK 272
++N E+A+ F+RM + + +A ++++L +L +G+++ + K F
Sbjct: 332 LAQNGSEEEAIQFFIRM-LQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG 390
Query: 273 NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQM 332
N +V+N ++ MY+KCG + + VF + RN SWNSMI A HG AL+LY++M
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMPK-RNYVSWNSMIAAFARHGHGLAALKLYEEM 449
Query: 333 LREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGK 392
P DVTF+ LL AC+H G+++KGR + MK I P+ EHY C++D+LGRAG
Sbjct: 450 TTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGL 509
Query: 393 LREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNI 452
L+EA I ++P+KPD IW LLGACSFHG+ E+ E AAE LF P + +++++NI
Sbjct: 510 LKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANI 569
Query: 453 YASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGV 512
Y+S +W AK K MK +TK G S +E + H F+VED+ HP++ I+ +L G+
Sbjct: 570 YSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGL 629
Query: 513 Y 513
+
Sbjct: 630 F 630
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 155/337 (45%), Gaps = 48/337 (14%)
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
+M+HA I SG+ ++ L+ Y K G R +FD M
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMS----------------- 217
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
RNV++ T +ISG +N+ +E L LF M + PN+VT S
Sbjct: 218 --------------HRNVITLTAVISGLIENELHEDGLRLFSLMR-RGLVHPNSVTYLSA 262
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
L AC+ + GQ++ A K G L + +A+++MY+KCG I+ AW +F +
Sbjct: 263 LAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE 322
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK 365
+ S +++GLA +G +A++ + +ML+ G D V +L + ++ + K
Sbjct: 323 V-SMTVILVGLAQNGSEEEAIQFFIRMLQAGVEI-DANVVSAVLGVS---FIDNSLGLGK 377
Query: 366 SMKTDFNIIPKLEHYG------CMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGAC 419
+ + ++ K + G ++++ + G L ++ V + MP K + V W +++ A
Sbjct: 378 QLHS---LVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAF 433
Query: 420 SFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASA 456
+ HG+ A E + TLE + P + LS ++A +
Sbjct: 434 ARHGHGLAALKLYEEMTTLEVK-PTDVTFLSLLHACS 469
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 4/229 (1%)
Query: 174 TWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEE 233
WN++++ +A+ G + A++LF MP R+V+S + G+ +N++ E L RM
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 234 DIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVA 293
+ TL +L C + + + A A +G+ K + V N ++ Y KCG
Sbjct: 152 GF--DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 294 WRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTH 353
VF+ + S RN+ + ++I GL + L L+ M R P+ VT++ L AC+
Sbjct: 210 RGVFDGM-SHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 354 GGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQT 402
+ +G+ I ++ + I +L ++D+ + G + +A+ + ++
Sbjct: 269 SQRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/466 (31%), Positives = 231/466 (49%), Gaps = 36/466 (7%)
Query: 22 IGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYX 81
+G N K + L I+ L+ L+ + A+ V V + ++ Y
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYT 295
Query: 82 XXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV 141
L M+ G PN G+ LH ++ D+
Sbjct: 296 EDGDVENA-LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDI 354
Query: 142 FAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
T+L+ MYAK ++L R+F +G +++
Sbjct: 355 IIETSLISMYAKCKRVDLCFRVF---------------SGASKY---------------- 383
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
+ W+ +I+G +N+ ALGLF RM ED+ PN TL S+LPA A L L +
Sbjct: 384 HTGPWSAIIAGCVQNELVSDALGLFKRMR-REDVEPNIATLNSLLPAYAALADLRQAMNI 442
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL---RNLCSWNSMIMGLAV 318
Y K GF +L + ++ +Y+KCG ++ A ++FN I +++ W ++I G +
Sbjct: 443 HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLE 378
HG AL+++ +M+R G TP+++TF L AC+H G+VE+G +F+ M + + +
Sbjct: 503 HGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSN 562
Query: 379 HYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTL 438
HY C+VDLLGRAG+L EAY +I T+P +P S +WG LL AC H NV+L E+AA LF L
Sbjct: 563 HYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFEL 622
Query: 439 EPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
EP N GNYV+L+NIYA+ +W + K+R +M+ + K GHS +E
Sbjct: 623 EPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIE 668
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 39/357 (10%)
Query: 10 KFSTLRNPNSKNIGMNQVKQIHGYTL---RTGIDQTKTLIEKLLEIPNLHYAQAVLHHSP 66
++ +L N + +++ K +H + + R TL ++ YA+ + P
Sbjct: 17 QYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 67 NSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS--PNQYXXXXXXXXXXXXXXXXX 124
S++ YN +++ Y S++ +M G P+ Y
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDA-ISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G ++H ++S F D + ALL MY
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMN------------------------------- 164
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
FG V+ A ++F +M +R+V+SW TMISGY +N AL +F M E + + T+ S
Sbjct: 165 FGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM-VNESVDLDHATIVS 223
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+LP C +L LE+G+ V + + V NA++ MY KCG +D A VF+ + R
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM-ERR 282
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
++ +W MI G G ALEL M EG P+ VT L+ C V G+
Sbjct: 283 DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 137/277 (49%), Gaps = 5/277 (1%)
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEE-DIMPNAV 240
+A G + A +LF MP +++S+ +I Y + Y A+ +F+RM E +P+
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 241 TLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI 300
T + A L ++++G V ++ F ++ YV NA+L MY G +++A VF+ +
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 301 GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKG 360
+ R++ SWN+MI G +G AL ++D M+ E D T V +L C H +E G
Sbjct: 179 KN-RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 361 RHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACS 420
R++ K ++ + + K+E +V++ + G++ EA V M + D + W ++ +
Sbjct: 238 RNVHKLVE-EKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYT 295
Query: 421 FHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASAD 457
G+VE A + L E P I S + D
Sbjct: 296 EDGDVENA-LELCRLMQFEGVRPNAVTIASLVSVCGD 331
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 220/395 (55%), Gaps = 35/395 (8%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G H +K GF DV+ ++L+ +Y G +E A ++F+E
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEE------------------ 180
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
MP RNVVSWT MISG+++ + + L L+ +M + PN T +
Sbjct: 181 -------------MPERNVVSWTAMISGFAQEWRVDICLKLYSKMR-KSTSDPNDYTFTA 226
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L AC GAL G+ V G L++SN+++ MY KCG + A+R+F++ S +
Sbjct: 227 LLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQF-SNK 285
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQML-REGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
++ SWNSMI G A HG +A+EL++ M+ + GT PD +T++G+L +C H G+V++GR
Sbjct: 286 DVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKF 345
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
F M + + P+L HY C+VDLLGR G L+EA E+I+ MPMKP+SVIWG+LL +C HG
Sbjct: 346 FNLM-AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Query: 424 NVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
+V AAE LEP +V L+N+YAS W A +RK+MK + + G S++
Sbjct: 405 DVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWI 464
Query: 484 EEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFKF 518
E + F ED S+ + EI +L + + +F
Sbjct: 465 EINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHMEF 499
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
+A L+S + +C G A K GF ++Y+ ++++ +Y G ++ A++VF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 298 NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMV 357
E+ RN+ SW +MI G A + L+LY +M + + P+D TF LL ACT G +
Sbjct: 179 EEMPE-RNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 358 EKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
+GR + + L ++ + + G L++A+ + K D V W +++
Sbjct: 238 GQGRSV-HCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNK-DVVSWNSMIA 295
Query: 418 ACSFHGNVELAEIAAESLFTLEPRN 442
+ HG LA A E + P++
Sbjct: 296 GYAQHG---LAMQAIELFELMMPKS 317
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 108/276 (39%), Gaps = 32/276 (11%)
Query: 58 AQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXX 117
A V P V + ++ + C LYS+MR PN Y
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDI-CLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 118 XXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNA 177
G+ +H + G + + +L+ MY K G L+ A R+FD+ ++V +WN+
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 178 MMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
M+AG+A+ G A+ELF LM ++ P
Sbjct: 293 MIAGYAQHGLAMQAIELFELMMPKS-------------------------------GTKP 321
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
+A+T +L +C + G ++ G++ ++G L + ++++ + G + A +
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELI 381
Query: 298 NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQML 333
+ N W S++ VHG + ++ L
Sbjct: 382 ENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERL 417
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 217/391 (55%), Gaps = 3/391 (0%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
L + + G P+ F + +L + E+ ++ R A++ + + G
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGK 443
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
V+ A ++F + +++V+W+ M++GY++ + E A+ +F + + I PN T +SIL
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILN 502
Query: 248 ACANLGA-LEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
CA A + G++ +A K+ +L VS+A+L MYAK G+I+ A VF ++L
Sbjct: 503 VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE-KDL 561
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
SWNSMI G A HG+ KAL+++ +M + D VTF+G+ ACTH G+VE+G F
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE 426
M D I P EH CMVDL RAG+L +A +VI+ MP S IW T+L AC H E
Sbjct: 622 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTE 681
Query: 427 LAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEG 486
L +AAE + ++P + YV+LSN+YA + W AK+RK+M + K G+S++E
Sbjct: 682 LGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVK 741
Query: 487 GQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
+ + F+ DRSHP ++I+ L+ + K
Sbjct: 742 NKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 167/405 (41%), Gaps = 43/405 (10%)
Query: 28 KQIHGYTLRTG----IDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
+Q+H ++ G + +L++ ++ N + V V + L+ Y
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
+L+ +M+ G PN + G +H +K+G +
Sbjct: 173 SMNDE-VLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
+ +L+++Y K G +V A LF ++V
Sbjct: 232 SNSLINLYLKCG-------------------------------NVRKARILFDKTEVKSV 260
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
V+W +MISGY+ N +ALG+F M + + + AS++ CANL L +++
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNY-VRLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
K GF + + A++ Y+KC + A R+F EIG + N+ SW +MI G +
Sbjct: 320 SVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKE 379
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
+A++L+ +M R+G P++ T+ +L A E + K+ + + +
Sbjct: 380 EAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT-----AL 434
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+D + GK+ EA +V + K D V W +L + G E A
Sbjct: 435 LDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGETEAA 478
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 33/229 (14%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ LH IK GF DV T+L+D Y K + R++FDEM R V TW +++G+AR
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
N ++ L LF+RM+ E PN+ T A+
Sbjct: 172 -------------------------------NSMNDEVLTLFMRMQ-NEGTQPNSFTFAA 199
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
L A G G +V KNG K + VSN+++ +Y KCG++ A R+ + ++
Sbjct: 200 ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA-RILFDKTEVK 258
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTH 353
++ +WNSMI G A +G +AL ++ M + +F ++ C +
Sbjct: 259 SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/299 (18%), Positives = 122/299 (40%), Gaps = 39/299 (13%)
Query: 29 QIHGYTLRTGIDQTKT----LIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
++H ++T +++ T L++ +++ + A V + + ++ +L Y
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 85 XXXXXCFSLYSQMRLLGHSPNQYXXXXXXXX-XXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
++ ++ G PN++ G+ H IKS +
Sbjct: 474 ETEA-AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
++ALL MYAK G +E A +F +++ +WN+M++G+A+ G AL++F+ M R V
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR-VE 262
+M+ VT + AC + G +E G++ +
Sbjct: 593 ------------------------KMD--------GVTFIGVFAACTHAGLVEEGEKYFD 620
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
R ++ ++++Y++ G ++ A +V + + W +++ VH K
Sbjct: 621 IMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKK 679
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 111/236 (47%), Gaps = 10/236 (4%)
Query: 191 ALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFL---RMECEEDIMPNAVTLASILP 247
A LF P R+ S+ +++ G+S++ + ++A LFL R+ E D +S+L
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMD----CSIFSSVLK 101
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLC 307
A L G+++ K GF ++ V ++++ Y K + +VF+E+ RN+
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE-RNVV 160
Query: 308 SWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM 367
+W ++I G A + + L L+ +M EGT P+ TF L G+ +G + +
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 368 KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ + + +++L + G +R+A + +K V W +++ + +G
Sbjct: 221 VKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISGYAANG 274
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 230/397 (57%), Gaps = 13/397 (3%)
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVRE---VPTW--NAMMAGHARFGDV 188
+ GF PD ++L + +G L R L +EM + + + T+ + +++ + + GD+
Sbjct: 226 EEGFEPDERTLVSMLGACSHLGDLRTGR-LLEEMAITKKIGLSTFLGSKLISMYGKCGDL 284
Query: 189 DGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA 248
D A +F M ++ V+WT MI+ YS+N + +A LF ME + + P+A TL+++L A
Sbjct: 285 DSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME-KTGVSPDAGTLSTVLSA 343
Query: 249 CANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCS 308
C ++GALE+G+++E +A + N+YV+ +++MY KCG ++ A RVF E ++N +
Sbjct: 344 CGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF-EAMPVKNEAT 402
Query: 309 WNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMK 368
WN+MI A G +AL L+D+M P D+TF+G+L AC H G+V +G F M
Sbjct: 403 WNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMS 459
Query: 369 TDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+ F ++PK+EHY ++DLL RAG L EA+E ++ P KPD ++ +LGAC +V +
Sbjct: 460 SMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIR 519
Query: 429 EIAAESLFTL-EPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGG 487
E A L + E +N GNYVI SN+ A WD AK+R +M+ + K+ G S++E G
Sbjct: 520 EKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEG 579
Query: 488 QLHKFIV-EDRSHPKSNEIFALLDGVYEMFKFNRSAF 523
+L +F+ D + +L D + E K R F
Sbjct: 580 ELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERYEF 616
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 203/409 (49%), Gaps = 35/409 (8%)
Query: 20 KNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQA 79
K I +NQ++QI L +++ LI K +E+ + +Y+ + + + +N +++
Sbjct: 46 KCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRG 105
Query: 80 YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
SLY +M+ G P+++ G+ +H+ K G
Sbjct: 106 LTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLER 165
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
DV +L+ MYAK G + AR+LFDE+ R+ +WN+M++G++
Sbjct: 166 DVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE--------------- 210
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
+GY+K+ A+ LF +ME EE P+ TL S+L AC++LG L G+
Sbjct: 211 -----------AGYAKD-----AMDLFRKME-EEGFEPDERTLVSMLGACSHLGDLRTGR 253
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
+E A + ++ + ++ MY KCG +D A RVFN++ ++ +W +MI + +
Sbjct: 254 LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIK-KDRVAWTAMITVYSQN 312
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
GK +A +L+ +M + G +PD T +L AC G +E G+ I ++ ++ ++ +
Sbjct: 313 GKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQI-ETHASELSLQHNIYV 371
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+VD+ G+ G++ EA V + MP+K ++ W ++ A + G+ + A
Sbjct: 372 ATGLVDMYGKCGRVEEALRVFEAMPVKNEAT-WNAMITAYAHQGHAKEA 419
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 229/425 (53%), Gaps = 38/425 (8%)
Query: 92 SLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMY 151
S++SQMR G P+ G +H++ IK GF D+ +LL MY
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMY 416
Query: 152 AKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMIS 211
L LF++ FR + + VSW T+++
Sbjct: 417 TFCSDLYCCFNLFED----------------------------FR--NNADSVSWNTILT 446
Query: 212 GYSKNKQYEKALGLFLRM---ECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKN 268
+++Q + L LF M ECE P+ +T+ ++L C + +L++G +V Y+ K
Sbjct: 447 ACLQHEQPVEMLRLFKLMLVSECE----PDHITMGNLLRGCVEISSLKLGSQVHCYSLKT 502
Query: 269 GFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALEL 328
G ++ N +++MYAKCG + A R+F+ + + R++ SW+++I+G A G +AL L
Sbjct: 503 GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDN-RDVVSWSTLIVGYAQSGFGEEALIL 561
Query: 329 YDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLG 388
+ +M G P+ VTFVG+L AC+H G+VE+G ++ +M+T+ I P EH C+VDLL
Sbjct: 562 FKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLA 621
Query: 389 RAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVI 448
RAG+L EA I M ++PD V+W TLL AC GNV LA+ AAE++ ++P N +V+
Sbjct: 622 RAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVL 681
Query: 449 LSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFAL 508
L +++AS+ W+ A LR MK + K G S++E ++H F ED HP+ ++I+ +
Sbjct: 682 LCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTV 741
Query: 509 LDGVY 513
L ++
Sbjct: 742 LHNIW 746
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 145/309 (46%), Gaps = 44/309 (14%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H H + S D +L MY K G+L AR
Sbjct: 86 GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAR----------------------- 122
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
E+F MP RN+VS+T++I+GYS+N Q +A+ L+L+M +ED++P+ S
Sbjct: 123 --------EVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKM-LQEDLVPDQFAFGS 173
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
I+ ACA+ + +G+++ A K +L NA++ MY + + A RVF I ++
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGI-PMK 232
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGT-TPDDVTFVGLLLACTHGGMVEKGRHI 363
+L SW+S+I G + G +AL +ML G P++ F L AC+ + G I
Sbjct: 233 DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI 292
Query: 364 FK-SMKTDF--NIIPKLEHYGC-MVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGAC 419
+K++ N I GC + D+ R G L A V + +PD+ W ++
Sbjct: 293 HGLCIKSELAGNAIA-----GCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGL 346
Query: 420 SFHGNVELA 428
+ +G + A
Sbjct: 347 ANNGYADEA 355
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 166/408 (40%), Gaps = 38/408 (9%)
Query: 19 SKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYN 74
S + + Q ++IH + L + L +L + +L A+ V P + Y
Sbjct: 78 SSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYT 137
Query: 75 KLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIK 134
++ Y LY +M P+Q+ G+ LHA IK
Sbjct: 138 SVITGYSQNGQGAEA-IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK 196
Query: 135 SGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALEL 194
+ + A AL+ MY + + A R+F +P++++ +W++++AG ++ G AL
Sbjct: 197 LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSH 256
Query: 195 FRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGA 254
+ M S G+F PN S L AC++L
Sbjct: 257 LKEMLS----------------------FGVF---------HPNEYIFGSSLKACSSLLR 285
Query: 255 LEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIM 314
+ G ++ K+ N ++ +MYA+CG ++ A RVF++I + SWN +I
Sbjct: 286 PDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI-ERPDTASWNVIIA 344
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
GLA +G +A+ ++ QM G PD ++ LL A T + +G I S + +
Sbjct: 345 GLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI-HSYIIKWGFL 403
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
L ++ + L + + + DSV W T+L AC H
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 120/255 (47%), Gaps = 19/255 (7%)
Query: 210 ISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNG 269
I+ K+ Y +AL F + T S++ AC++ +L G+++ + +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 270 FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELY 329
+ ++N +L MY KCG + A VF+ + RNL S+ S+I G + +G+ +A+ LY
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPE-RNLVSYTSVITGYSQNGQGAEAIRLY 156
Query: 330 DQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS---MKTDFNIIPKLEHYGCMVDL 386
+ML+E PD F ++ AC V G+ + +++ ++I + ++ +
Sbjct: 157 LKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ----NALIAM 212
Query: 387 LGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACS-----FHGNVELAEIAAESLFTLEPR 441
R ++ +A V +PMK D + W +++ S F L E+ + +F
Sbjct: 213 YVRFNQMSDASRVFYGIPMK-DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF----- 266
Query: 442 NPGNYVILSNIYASA 456
+P Y+ S++ A +
Sbjct: 267 HPNEYIFGSSLKACS 281
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 242/462 (52%), Gaps = 38/462 (8%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQA 79
+N KQ+HGYTL++G+ T+ L + +L + + P + ++
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISG 525
Query: 80 YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
+ L+S+M G SP++ G+ +H + +++G
Sbjct: 526 FNEYGYLREA-IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK 584
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
+ +AL++MY+K G+L+LAR+++D +P + + +++++G+++ G + LFR M
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDM- 643
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
V+S TM ++ ++SIL A A +G
Sbjct: 644 ---VMSGFTM----------------------------DSFAISSILKAAALSDESSLGA 672
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
+V AY K G V +++L MY+K G ID + F++I +L +W ++I A H
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING-PDLIAWTALIASYAQH 731
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
GK +AL++Y+ M +G PD VTFVG+L AC+HGG+VE+ SM D+ I P+ H
Sbjct: 732 GKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRH 791
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
Y CMVD LGR+G+LREA I M +KPD+++WGTLL AC HG VEL ++AA+ LE
Sbjct: 792 YVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELE 851
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHS 481
P + G Y+ LSNI A +WD V + RK+MKG+ + K G S
Sbjct: 852 PSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 180/397 (45%), Gaps = 47/397 (11%)
Query: 33 YTLRTGIDQTKTLIEKLLEI--PNLHYAQA--VLHHSPNSTVFLYNKLLQAYXXXXXXXX 88
+T++ G + + L+++ NL + A V S ++ V+ +N ++ A
Sbjct: 175 HTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTII-AGALRNQNYG 233
Query: 89 XCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALL 148
F L+ +M + P+ Y G+++ A IK G A DVF TA++
Sbjct: 234 AVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIV 292
Query: 149 DMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTT 208
D+YAK G + A+E+F +P+ +VVSWT
Sbjct: 293 DLYAKCGHMA-------------------------------EAMEVFSRIPNPSVVSWTV 321
Query: 209 MISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKN 268
M+SGY+K+ AL +F M + N T+ S++ AC + +V A+ K+
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMR-HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380
Query: 269 GFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALEL 328
GF+ + V+ A++ MY+K G ID++ +VF ++ ++ N MI + K GKA+ L
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRL 440
Query: 329 YDQMLREGTTPDDVTFVGLL--LACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDL 386
+ +ML+EG D+ + LL L C + G G + + D + L L
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSL------FTL 494
Query: 387 LGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ G L E+Y++ Q +P K D+ W +++ + +G
Sbjct: 495 YSKCGSLEESYKLFQGIPFK-DNACWASMISGFNEYG 530
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 144/356 (40%), Gaps = 38/356 (10%)
Query: 11 FSTLRNPNSKNIGMNQVKQIH---GYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPN 67
F+ N N+ ++ Q H Y L + TK+L+ ++ A + P
Sbjct: 53 FNDQSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQ 112
Query: 68 STVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQM 127
V N ++ Y +S+M LG N+ ++
Sbjct: 113 PDVVSCNIMISGYKQHRLFEES-LRFFSKMHFLGFEANEISYGSVISACSALQAPLFSEL 171
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
+ H IK G+ +AL+D+++K E A ++F + V WN ++AG R +
Sbjct: 172 VCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQN 231
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
+LF M G+ K P++ T +S+L
Sbjct: 232 YGAVFDLFH-----------EMCVGFQK---------------------PDSYTYSSVLA 259
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLC 307
ACA+L L G+ V+A K G ++++V A++++YAKCGH+ A VF+ I + ++
Sbjct: 260 ACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPN-PSVV 317
Query: 308 SWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
SW M+ G ALE++ +M G ++ T ++ AC MV + +
Sbjct: 318 SWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 47/297 (15%)
Query: 126 QMLHAHFIKSGFAP-DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
++L AH ++ P DVF +LL Y+ G++ A +LFD +
Sbjct: 68 KILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTI----------------- 110
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
P +VVS MISGY +++ +E++L F +M N ++ S
Sbjct: 111 --------------PQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF-LGFEANEISYGS 155
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ AC+ L A + V + K G+F V +A++++++K + A++VF + S
Sbjct: 156 VISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSAN 215
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT-----HGGMVEK 359
C WN++I G + G +L+ +M PD T+ +L AC G V +
Sbjct: 216 VYC-WNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQ 274
Query: 360 GRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
R + K D + + VDL + G + EA EV +P P V W +L
Sbjct: 275 AR-VIKCGAEDVFVCTAI------VDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVML 323
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 213/386 (55%), Gaps = 33/386 (8%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +H IK+G +VF ++L+D+Y+K G E+A
Sbjct: 495 GLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMA------------------------ 530
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
L++F M + N+V+W +MIS YS+N E ++ LF M + I P++V++ S
Sbjct: 531 -------LKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLM-LSQGIFPDSVSITS 582
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L A ++ +L G+ + Y + G + ++ NA+++MY KCG A +F ++ +
Sbjct: 583 VLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH-K 641
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+L +WN MI G HG C AL L+D+M + G +PDDVTF+ L+ AC H G VE+G++IF
Sbjct: 642 SLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIF 701
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+ MK D+ I P +EHY MVDLLGRAG L EAY I+ MP++ DS IW LL A H N
Sbjct: 702 EFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHN 761
Query: 425 VELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
VEL ++AE L +EP YV L N+Y A + AKL +MK + K G S++E
Sbjct: 762 VELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIE 821
Query: 485 EGGQLHKFIVEDRSHPKSNEIFALLD 510
+ + F S P EIF +L+
Sbjct: 822 VSDRTNVFFSGGSSSPMKAEIFNVLN 847
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 27/241 (11%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H + G+ D F AT+L++MY K G L+ A ++FD W+ +G
Sbjct: 79 GKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD--------GWSQSQSG--- 127
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
+ +R+V W +MI GY K +++++ +G F RM + P+A +L+
Sbjct: 128 -------------VSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVF-GVRPDAFSLSI 173
Query: 245 ILPACANLGAL--EIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
++ G E G+++ + +N + ++ A+++MY K G AWRVF EI
Sbjct: 174 VVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIED 233
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
N+ WN MI+G G C +L+LY +F G L AC+ GR
Sbjct: 234 KSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQ 293
Query: 363 I 363
I
Sbjct: 294 I 294
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 174/421 (41%), Gaps = 55/421 (13%)
Query: 21 NIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI-----PNLHYAQAVLHHSPNSTVFLYNK 75
N + KQIHG+ LR +D L L+++ ++ + + S V L+N
Sbjct: 183 NFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNV 242
Query: 76 LLQAYXXXXXXXXXCFSLY-----SQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHA 130
++ + LY + ++L+ S G+ +H
Sbjct: 243 MIVGFGGSGICESS-LDLYMLAKNNSVKLVSTS-----FTGALGACSQSENSGFGRQIHC 296
Query: 131 HFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDG 190
+K G D + T+LL MY+K G + A +F + + + WNAM+A +A
Sbjct: 297 DVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYS 356
Query: 191 ALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACA 250
AL+LF M ++V +P++ TL++++ C+
Sbjct: 357 ALDLFGFMRQKSV--------------------------------LPDSFTLSNVISCCS 384
Query: 251 NLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWN 310
LG G+ V A K + +A+L +Y+KCG A+ VF + +++ +W
Sbjct: 385 VLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE-KDMVAWG 443
Query: 311 SMIMGLAVHGKCGKALELYDQMLREGTT--PDDVTFVGLLLACTHGGMVEKGRHIFKSM- 367
S+I GL +GK +AL+++ M + + PD + AC + G + SM
Sbjct: 444 SLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI 503
Query: 368 KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVEL 427
KT ++ + ++DL + G A +V +M + + V W +++ S + EL
Sbjct: 504 KT--GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMISCYSRNNLPEL 560
Query: 428 A 428
+
Sbjct: 561 S 561
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 168/431 (38%), Gaps = 55/431 (12%)
Query: 6 TTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQ----TKTLIEKLLEIPNLHYAQAV 61
T+ F F +L S ++ K IHG + G +L+ ++ L YA V
Sbjct: 58 TSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQV 117
Query: 62 LHHSPNST-------VFLYNKLLQAYXXXXXXX--XXCFSLYSQMRLLGHSPNQYXXXXX 112
S V ++N ++ Y CF +M + G P+ +
Sbjct: 118 FDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFR---RMLVFGVRPDAFSLSIV 174
Query: 113 XXXXXXX--XXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR 170
G+ +H +++ D F TAL+DMY K G A R+F E+ +
Sbjct: 175 VSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK 234
Query: 171 EVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRME 230
NVV W MI G+ + E +L L++ +
Sbjct: 235 S------------------------------NVVLWNVMIVGFGGSGICESSLDLYMLAK 264
Query: 231 CEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHI 290
+ + + L AC+ G+++ K G + YV ++L MY+KCG +
Sbjct: 265 -NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMV 323
Query: 291 DVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA 350
A VF+ + R L WN+M+ A + AL+L+ M ++ PD T ++
Sbjct: 324 GEAETVFSCVVDKR-LEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISC 382
Query: 351 CTHGGMVEKGRHIFKSM-KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDS 409
C+ G+ G+ + + K +E ++ L + G +AY V ++M K D
Sbjct: 383 CSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAYLVFKSMEEK-DM 439
Query: 410 VIWGTLL-GAC 419
V WG+L+ G C
Sbjct: 440 VAWGSLISGLC 450
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 18/247 (7%)
Query: 29 QIHGYTLRTGIDQTKTLIEKLLEI------PNLHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
Q+HG ++TG+ + L+++ P + A V + +N ++ Y
Sbjct: 497 QVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM--ALKVFTSMSTENMVAWNSMISCYSR 554
Query: 83 XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVF 142
L++ M G P+ G+ LH + ++ G D
Sbjct: 555 NNLPELS-IDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTH 613
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP--- 199
AL+DMY K G + A +F +M + + TWN M+ G+ GD AL LF M
Sbjct: 614 LKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAG 673
Query: 200 -SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG 258
S + V++ ++IS + + E+ +F M+ + I PN A+++ G LE
Sbjct: 674 ESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLE-- 731
Query: 259 QRVEAYA 265
EAY+
Sbjct: 732 ---EAYS 735
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 218 QYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVS 277
+Y +AL L+ + + + T S+L AC+ L L G+ + G+ + +++
Sbjct: 39 EYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIA 98
Query: 278 NAVLEMYAKCGHIDVAWRVFNEIG------SLRNLCSWNSMIMGLAVHGKCGKALELYDQ 331
+++ MY KCG +D A +VF+ S R++ WNSMI G + + + + +
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRR 158
Query: 332 MLREGTTPDDVTF-VGLLLACTHGGM-VEKGRHIF-----KSMKTDFNIIPKLEHYGCMV 384
ML G PD + + + + C G E+G+ I S+ TD + L +
Sbjct: 159 MLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTAL------I 212
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
D+ + G +A+ V + K + V+W ++
Sbjct: 213 DMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 267/549 (48%), Gaps = 77/549 (14%)
Query: 12 STLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPN 67
S L S+ + KQI + + + +I K++ + +V+ HS
Sbjct: 7 SVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIR 66
Query: 68 STV--FLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
S + F YN LL +Y F+ Y G SP+ + G
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRVTIFA-YKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
+ +H K GF D++ +L+ Y G A ++F EMPVR+V +W ++ G R
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 186 GDVDGALELFR---------------------------------LMPSRNVVSWTT---M 209
G AL+ F ++ +++S T +
Sbjct: 186 GLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 210 ISGYSKNKQYEKALGLFLRME----------------CEED---------------IMPN 238
I Y K +Q A+ +F +E CE I P+
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 239 AVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN 298
L S+L ACA+LGA++ G+ V Y G + ++ A+++MYAKCG+I+ A +FN
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 299 EIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVE 358
I S +N+ +WN+++ GLA+HG ++L +++M++ G P+ VTF+ L AC H G+V+
Sbjct: 366 GIRS-KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVD 424
Query: 359 KGRHIFKSMKT-DFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
+GR F MK+ ++N+ PKLEHYGCM+DLL RAG L EA E+++ MP+KPD I G +L
Sbjct: 425 EGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILS 484
Query: 418 ACSFHGNV-ELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITK 476
AC G + EL + +S +E + G YV+LSNI+A+ +WD VA++R++MK I+K
Sbjct: 485 ACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISK 544
Query: 477 SAGHSFLEE 485
G S++E+
Sbjct: 545 VPGSSYIEK 553
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 223/394 (56%), Gaps = 36/394 (9%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +H IK GF + + + +L+ YA + +R++FDE V E
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE-KVHE------------- 289
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
V WT ++SGYS NK++E AL +F M I+PN T AS
Sbjct: 290 -----------------QVAVWTALLSGYSLNKKHEDALSIFSGM-LRNSILPNQSTFAS 331
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
L +C+ LG L+ G+ + A K G + +V N+++ MY+ G+++ A VF +I +
Sbjct: 332 GLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFK-K 390
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
++ SWNS+I+G A HG+ A ++ QM+R PD++TF GLL AC+H G +EKGR +F
Sbjct: 391 SIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF 450
Query: 365 KSMKTDFNIIP-KLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
M + N I K++HY CMVD+LGR GKL+EA E+I+ M +KP+ ++W LL AC H
Sbjct: 451 YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHS 510
Query: 424 NVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
+V+ E AA ++F L+ ++ YV+LSNIYASA +W V+KLR MK + I K G S++
Sbjct: 511 DVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Query: 484 EEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
G+ H+F D+ P + I+ L+ + E K
Sbjct: 571 VIRGKKHEFFSGDQ--PHCSRIYEKLEFLREKLK 602
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 153/294 (52%), Gaps = 16/294 (5%)
Query: 141 VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPS 200
V + TA+++ + G ++ A RLF +MPV++ WN+M+ G+ +FG VD AL+LF+ MP
Sbjct: 128 VVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPG 187
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRM-ECEEDIMPNAVTLASILPACANLGALEIGQ 259
+NV+SWTTMI G +N++ +AL LF M C I + ++ ACAN A +G
Sbjct: 188 KNVISWTTMICGLDQNERSGEALDLFKNMLRC--CIKSTSRPFTCVITACANAPAFHMGI 245
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
+V K GF YVS +++ YA C I + +VF+E + W +++ G +++
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE-KVHEQVAVWTALLSGYSLN 304
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK-----SMKTDFNII 374
K AL ++ MLR P+ TF L +C+ G ++ G+ + ++TD +
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
L V + +G + +A V + K V W +++ C+ HG + A
Sbjct: 365 NSL------VVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWA 411
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 138 APDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRL 197
+P V T ++ Y + L A LFDEMPVR+V +WN+M++G GD++ A++LF
Sbjct: 63 SPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDE 122
Query: 198 MPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
MP R+VVSWT M++G ++ + ++A LF +M
Sbjct: 123 MPERSVVSWTAMVNGCFRSGKVDQAERLFYQMP--------------------------- 155
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLA 317
K+ N+++ Y + G +D A ++F ++ +N+ SW +MI GL
Sbjct: 156 -------------VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPG-KNVISWTTMICGLD 201
Query: 318 VHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
+ + G+AL+L+ MLR F ++ AC +
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 216/400 (54%), Gaps = 37/400 (9%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +HA K G +V T L+D Y K + E A R F E +RE
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQE--IRE------------- 348
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
N VSW+ +ISGY + Q+E+A+ F + + + N+ T S
Sbjct: 349 ----------------PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTS 392
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
I AC+ L IG +V A A K + Y +A++ MY+KCG +D A VF + +
Sbjct: 393 IFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDN-P 451
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
++ +W + I G A +G +AL L+++M+ G P+ VTF+ +L AC+H G+VE+G+H
Sbjct: 452 DIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCL 511
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+M +N+ P ++HY CM+D+ R+G L EA + ++ MP +PD++ W L C H N
Sbjct: 512 DTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKN 571
Query: 425 VELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
+EL EIA E L L+P + YV+ N+Y A +W+ A++ K+M + K S+++
Sbjct: 572 LELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQ 631
Query: 485 EGGQLHKFIVEDRSHPKSNEIFALL---DGVYE--MFKFN 519
E G++H+FIV D+ HP++ EI+ L DG E MF+ N
Sbjct: 632 EKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCN 671
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 202/516 (39%), Gaps = 82/516 (15%)
Query: 6 TTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHS 65
T FS+ R P KN +Q+ T K + K ++ NLH H
Sbjct: 5 TVQSSFSSSRVPVIKNANFDQIPSWVSLKSSTSSPSVK-ISHKQGQVENLHLVSLSKHRK 63
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXC-FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXX 124
N ++ +A C F ++R L H
Sbjct: 64 LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH---------------------- 101
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G++LH P V +L MY + +LE A +LFDEM
Sbjct: 102 GRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMS---------------- 145
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
EL N VS TTMIS Y++ +KA+GLF M D P+++ +
Sbjct: 146 --------EL-------NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM-YTT 189
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L + N AL+ G+++ A+ + G N + ++ MY KCG + A RVF+++ +++
Sbjct: 190 LLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM-AVK 248
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ +++G G+ AL+L+ ++ EG D F +L AC + G+ I
Sbjct: 249 KPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIH 308
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+ + ++ +VD + A Q + +P+ V W ++ S +
Sbjct: 309 ACV-AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWSAII---SGYCQ 363
Query: 425 VELAEIAAESLFTLEPRNPG--NYVILSNIYAS----ADQWDG----VAKLRKVMKGSQI 474
+ E A ++ +L +N N ++I+ + AD G +++ + GSQ
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 475 TKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
+SA + + G L +NE+F +D
Sbjct: 424 GESALITMYSKCGCL----------DDANEVFESMD 449
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 246/483 (50%), Gaps = 39/483 (8%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEIPNLH----YAQAVLHHSPNSTVFLYNKLLQAYXXX 83
+Q+H ++ TG + ++ ++L+ + H + + P YN ++ +Y
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
+ +M+ +G + G+ LH + + +
Sbjct: 330 DQYEAS-LHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
+L+DMYAK +F+E + +F+ +P R
Sbjct: 389 GNSLVDMYAKC-------EMFEEAEL------------------------IFKSLPQRTT 417
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
VSWT +ISGY + + L LF +M ++ + T A++L A A+ +L +G+++ A
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMR-GSNLRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
+ ++G +N++ + +++MYAKCG I A +VF E+ RN SWN++I A +G
Sbjct: 477 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD-RNAVSWNALISAHADNGDGE 535
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
A+ + +M+ G PD V+ +G+L AC+H G VE+G F++M + I PK +HY CM
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEP-RN 442
+DLLGR G+ EA +++ MP +PD ++W ++L AC H N LAE AAE LF++E R+
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Query: 443 PGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKS 502
YV +SNIYA+A +W+ V ++K M+ I K +S++E ++H F D++HP
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNG 715
Query: 503 NEI 505
+EI
Sbjct: 716 DEI 718
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 127/227 (55%), Gaps = 6/227 (2%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
+ A IK+GF D + +++ + G + AR+++DEMP + + N M++GH + GD
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEED--IMPNAVTLASI 245
V A +LF MP R VV+WT ++ Y++N +++A LF +M C +P+ VT ++
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM-CRSSSCTLPDHVTFTTL 153
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKN--LYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
LP C + +V A+A K GF N L VSN +L+ Y + +D+A +F EI
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE- 212
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA 350
++ ++N++I G G +++ L+ +M + G P D TF G+L A
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 180/424 (42%), Gaps = 42/424 (9%)
Query: 11 FSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQ------TKTLIEKLLEIPNLHYAQAVLHH 64
F+TL + + N V Q+H + ++ G D + L++ E+ L A +
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 65 SPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXX 124
P +N L+ Y L+ +MR GH P+ +
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTES-IHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
GQ LHA + +GF+ D +LD Y+K + R LFDEMP
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP---------------- 312
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
EL + VS+ +IS YS+ QYE +L F M+C N A+
Sbjct: 313 --------EL-------DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRN-FPFAT 356
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L ANL +L++G+++ A L+V N++++MYAKC + A +F + R
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ-R 415
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
SW ++I G G G L+L+ +M D TF +L A + G+ +
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH 475
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+ N+ G +VD+ + G +++A +V + MP + ++V W L+ A + +G+
Sbjct: 476 AFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGD 533
Query: 425 VELA 428
E A
Sbjct: 534 GEAA 537
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 148/365 (40%), Gaps = 38/365 (10%)
Query: 9 FKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHH 64
F F+T+ + + + +Q+H L D +L++ + A+ +
Sbjct: 352 FPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKS 411
Query: 65 SPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXX 124
P T + L+ Y L+++MR +Q
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAG-LKLFTKMRGSNLRADQSTFATVLKASASFASLLL 470
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ LHA I+SG +VF+ + L+DMYAK G+++ A ++F+EMP R +WNA+++ HA
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHAD 530
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
GD E A+G F +M E + P++V++
Sbjct: 531 NGD-------------------------------GEAAIGAFAKM-IESGLQPDSVSILG 558
Query: 245 ILPACANLGALEIG-QRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
+L AC++ G +E G + +A + G +L++ + G A ++ +E+
Sbjct: 559 VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 618
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
+ W+S++ +H A +++ D +V + G EK R +
Sbjct: 619 PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDV 678
Query: 364 FKSMK 368
K+M+
Sbjct: 679 KKAMR 683
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/482 (30%), Positives = 248/482 (51%), Gaps = 41/482 (8%)
Query: 9 FKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHH 64
+ + TL +K ++Q K HG +++GI+ + L+ LL++ ++ A+ V +
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 302
Query: 65 SPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXX 124
+ + ++ ++ Y SL+ +M+ + PN
Sbjct: 303 HSHVDLVMWTAMIVGYTHNGSVNEA-LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H IK G D A AL+ MYAK A+ +F+
Sbjct: 362 GRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFE------------------- 401
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
+ +++V+W ++ISG+S+N +AL LF RM E + PN VT+AS
Sbjct: 402 ------------MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN-SESVTPNGVTVAS 448
Query: 245 ILPACANLGALEIGQRVEAYARKNGFF--KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+ ACA+LG+L +G + AY+ K GF +++V A+L+ YAKCG A +F+ I
Sbjct: 449 LFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEE 508
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
+N +W++MI G G +LEL+++ML++ P++ TF +L AC H GMV +G+
Sbjct: 509 -KNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKK 567
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
F SM D+N P +HY CMVD+L RAG+L +A ++I+ MP++PD +G L C H
Sbjct: 568 YFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMH 627
Query: 423 GNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSF 482
+L EI + + L P + YV++SN+YAS +W+ ++R +MK ++K AGHS
Sbjct: 628 SRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHST 687
Query: 483 LE 484
+E
Sbjct: 688 ME 689
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 28/356 (7%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTW-NAMMAG----H 182
L+ +K GF D + L ++ L+ +++ ++ +VP++ N ++ G +
Sbjct: 129 LYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV--KVPSFDNVVLTGLLDMY 186
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
A+ G++ A ++F + RNVV WT+MI+GY KN E+ L LF RM E +++ N T
Sbjct: 187 AKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR-ENNVLGNEYTY 245
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+++ AC L AL G+ K+G + + ++L+MY KCG I A RVFNE S
Sbjct: 246 GTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE-HS 304
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
+L W +MI+G +G +AL L+ +M P+ VT +L C +E GR
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364
Query: 363 IFK-SMKT---DFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
+ S+K D N+ L H + + + R+A V + M + D V W +++
Sbjct: 365 VHGLSIKVGIWDTNVANALVH------MYAKCYQNRDAKYVFE-MESEKDIVAWNSIISG 417
Query: 419 CSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQI 474
S +G++ E+LF N + + N A + A L + GS +
Sbjct: 418 FSQNGSIH------EALFLFHRMNSES--VTPNGVTVASLFSACASLGSLAVGSSL 465
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L C N+ +L ++ NG ++ ++ ++ +Y G+ A VF++I
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPE-P 105
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ W M+ ++ + + ++LYD +++ G DD+ F L ACT ++ G+ I
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH 165
Query: 365 KSMKTDFNIIPKLEHY--GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
+ +P ++ ++D+ + G+++ A++V + ++ + V W +++
Sbjct: 166 CQLVK----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIAG 216
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 250/487 (51%), Gaps = 39/487 (8%)
Query: 27 VKQIHGYTLRTGIDQTK----TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
+K++H Y+L+ + + + +L YAQ V H + TV +N L+ +
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 83 XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVF 142
+ QM++ G P+ + G+ +H I++ D+F
Sbjct: 474 SNDPRLS-LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF 532
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRN 202
++L +Y G L + LFD M ++
Sbjct: 533 VYLSVLSLYIHCGELCTVQALFDAME-------------------------------DKS 561
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
+VSW T+I+GY +N ++ALG+F +M I +++ + AC+ L +L +G+
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVFRQM-VLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC 322
AYA K+ + +++ ++++MYAK G I + +VFN + ++ SWN+MIMG +HG
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE-KSTASWNAMIMGYGIHGLA 679
Query: 323 GKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGC 382
+A++L+++M R G PDD+TF+G+L AC H G++ +G MK+ F + P L+HY C
Sbjct: 680 KEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYAC 739
Query: 383 MVDLLGRAGKLREAYEVI-QTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPR 441
++D+LGRAG+L +A V+ + M + D IW +LL +C H N+E+ E A LF LEP
Sbjct: 740 VIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE 799
Query: 442 NPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPK 501
P NYV+LSN+YA +W+ V K+R+ M + K AG S++E ++ F+V +R
Sbjct: 800 KPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDG 859
Query: 502 SNEIFAL 508
EI +L
Sbjct: 860 FEEIKSL 866
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 169 VREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKA---LGL 225
V +V NA+++ + G V AL+LF +MP RN+VSW +MI +S N E++ LG
Sbjct: 219 VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGE 278
Query: 226 FLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYA 285
+ + MP+ TL ++LP CA + +G+ V +A K K L ++NA+++MY+
Sbjct: 279 MMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYS 338
Query: 286 KCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLR--EGTTPDDVT 343
KCG I A +F ++ + +N+ SWN+M+ G + G ++ QML E D+VT
Sbjct: 339 KCGCITNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 397
Query: 344 FVGLLLACTHGGMVE--KGRHIFKSMKTDF 371
+ + C H + K H + S+K +F
Sbjct: 398 ILNAVPVCFHESFLPSLKELHCY-SLKQEF 426
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 7/247 (2%)
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+A G D + +F + S+N+ W +IS YS+N+ Y++ L F+ M D++P+ T
Sbjct: 130 YAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFT 189
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
++ ACA + + IG V K G ++++V NA++ Y G + A ++F +I
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF-DIM 248
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTT----PDDVTFVGLLLACTHGGMV 357
RNL SWNSMI + +G ++ L +M+ E PD T V +L C +
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 358 EKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
G+ + + +L ++D+ + G + A ++I M + V W T++G
Sbjct: 309 GLGKGV-HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVG 366
Query: 418 ACSFHGN 424
S G+
Sbjct: 367 GFSAEGD 373
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 177/414 (42%), Gaps = 52/414 (12%)
Query: 20 KNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPN----LHYAQAVLHHSPNSTVFLYNK 75
+ IG+ K +HG+ ++ +D+ L L+++ + + AQ + + N V +N
Sbjct: 306 REIGLG--KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 76 LLQAYXXXXXXXXXCFSLYSQMRLLGHS--PNQYXXXXXXXXXXXXXXXXXGQMLHAHFI 133
++ + F + QM G ++ + LH + +
Sbjct: 364 MVGGFSAEGDTHGT-FDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALE 193
K F + A A + YAK G+L A+R+F + + V +WNA++ GHA+ D +L+
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482
Query: 194 LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
M ISG ++P++ T+ S+L AC+ L
Sbjct: 483 AHLQMK----------ISG----------------------LLPDSFTVCSLLSACSKLK 510
Query: 254 ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
+L +G+ V + +N ++L+V +VL +Y CG + +F+ + ++L SWN++I
Sbjct: 511 SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED-KSLVSWNTVI 569
Query: 314 MGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR----HIFKSMKT 369
G +G +AL ++ QM+ G ++ + + AC+ + GR + K +
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 629
Query: 370 DFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
D I ++D+ + G + ++ +V + K + W ++ HG
Sbjct: 630 DDAFIA-----CSLIDMYAKNGSITQSSKVFNGLKEKS-TASWNAMIMGYGIHG 677
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 16/238 (6%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELAR---------RLFDEMPVREVPTWNAMMAGHARFG 186
F PDV +L + A+ + L + RL E+ + NA+M +++ G
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLN-----NALMDMYSKCG 341
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECE-EDIMPNAVTLASI 245
+ A +F++ ++NVVSW TM+ G+S + +M ED+ + VT+ +
Sbjct: 342 CITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNA 401
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
+P C + L + + Y+ K F N V+NA + YAKCG + A RVF+ I S +
Sbjct: 402 VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS-KT 460
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
+ SWN++I G A +L+ + QM G PD T LL AC+ + G+ +
Sbjct: 461 VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 127/318 (39%), Gaps = 39/318 (12%)
Query: 8 TFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTK----TLIEKLLEIPNLHYAQAVLH 63
+F +L + SK + K++HG+ +R +++ +++ + L QA+
Sbjct: 496 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 64 HSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXX 123
+ ++ +N ++ Y ++ QM L G
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRA-LGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR 614
Query: 124 XGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA 183
G+ HA+ +K D F A +L+DMYAK G++ + ++F+ + + +WNAM+ G+
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
G A++LF M +G++ P+ +T
Sbjct: 675 IHGLAKEAIKLFEEMQR----------TGHN----------------------PDDLTFL 702
Query: 244 SILPACANLGALEIGQR-VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF-NEIG 301
+L AC + G + G R ++ G NL V++M + G +D A RV E+
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Query: 302 SLRNLCSWNSMIMGLAVH 319
++ W S++ +H
Sbjct: 763 EEADVGIWKSLLSSCRIH 780
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/481 (30%), Positives = 247/481 (51%), Gaps = 35/481 (7%)
Query: 30 IHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXX 89
++G + + LI + +L A+ V P+ + +N ++ A
Sbjct: 16 VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI-AGLIQFEFNEE 74
Query: 90 CFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLD 149
SL+ +M LG SP++Y GQ +H + IK G D+ ++L
Sbjct: 75 GLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAH 134
Query: 150 MYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTM 209
MY + G L+ + MPVR + WN ++ G+A+ G + L L+++M
Sbjct: 135 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK---------- 184
Query: 210 ISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNG 269
ISG C PN +T ++L +C++L GQ++ A A K G
Sbjct: 185 ISG------------------CR----PNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG 222
Query: 270 FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELY 329
+ V ++++ MY+KCG + A + F+E + W+SMI HG+ +A+EL+
Sbjct: 223 ASSVVAVVSSLISMYSKCGCLGDAAKAFSERED-EDEVMWSSMISAYGFHGQGDEAIELF 281
Query: 330 DQMLREGTTP-DDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLG 388
+ M + ++V F+ LL AC+H G+ +KG +F M + P L+HY C+VDLLG
Sbjct: 282 NTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLG 341
Query: 389 RAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVI 448
RAG L +A +I++MP+K D VIW TLL AC+ H N E+A+ + + ++P + YV+
Sbjct: 342 RAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVL 401
Query: 449 LSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFAL 508
L+N++ASA +W V+++RK M+ + K AG S+ E G++H+F + DRS KS EI++
Sbjct: 402 LANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSY 461
Query: 509 L 509
L
Sbjct: 462 L 462
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 8/290 (2%)
Query: 148 LDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWT 207
+ MY+K+G A ++ M + + N ++ G+ R GD+ A ++F MP R + +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 208 TMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARK 267
MI+G + + E+ L LF M P+ TL S+ A L ++ IGQ++ Y K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMH-GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 268 NGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALE 327
G +L V++++ MY + G + V + +RNL +WN++IMG A +G L
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM-PVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 328 LYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLL 387
LY M G P+ +TFV +L +C+ + +G+ I + + ++ +
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMY 237
Query: 388 GRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN----VELAEIAAE 433
+ G L +A + D V+W +++ A FHG +EL AE
Sbjct: 238 SKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAE 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 139/350 (39%), Gaps = 43/350 (12%)
Query: 13 TLRNPNSKNIGMNQV---KQIHGYTLRTGID----QTKTLIEKLLEIPNLHYAQAVLHHS 65
TL + S + G+ V +QIHGYT++ G++ +L + L + V+
Sbjct: 93 TLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM 152
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
P + +N L+ + LY M++ G PN+ G
Sbjct: 153 PVRNLVAWNTLIMGNAQNGCPETVLY-LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQG 211
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
Q +HA IK G + V ++L+ MY+K G L A + F E + W++M++ +
Sbjct: 212 QQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFH 271
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
G D A+ELF M + ++ N V ++
Sbjct: 272 GQGDEAIELFNTMAEQT-------------------------------NMEINEVAFLNL 300
Query: 246 LPACANLGALEIG-QRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
L AC++ G + G + + K GF L V+++ + G +D A + +
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
++ W +++ +H A ++ ++L+ P+D + +LLA H
Sbjct: 361 DIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND-SACYVLLANVHA 407
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/360 (35%), Positives = 218/360 (60%), Gaps = 2/360 (0%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H H K G D+ A+ LLDMY+K G+ A +LF E+ + N+M+ +
Sbjct: 337 GKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFS 396
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G +D A +F + +++++SW +M +G+S+N + L F +M + D+ + V+L+S
Sbjct: 397 CGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH-KLDLPTDEVSLSS 455
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ ACA++ +LE+G++V A A G + VS++++++Y KCG ++ RVF+ +
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ WNSMI G A +G+ +A++L+ +M G P +TF+ +L AC + G+VE+GR +F
Sbjct: 516 EV-PWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLF 574
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+SMK D +P EH+ CMVDLL RAG + EA +++ MP D +W ++L C +G
Sbjct: 575 ESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGY 634
Query: 425 VELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
+ + AAE + LEP N YV LS I+A++ W+ A +RK+M+ + +TK+ G S+ +
Sbjct: 635 KAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 162/332 (48%), Gaps = 40/332 (12%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +HA + G D ++L+++YAK G L +A + +++ + + +A+++G+A
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLF--LRMECEEDIMPNAVTL 242
G V+ + LF +R V+ W +MISGY N +AL LF +R E ED + TL
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRED----SRTL 321
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAK---------------- 286
A+++ AC LG LE G+++ +A K G ++ V++ +L+MY+K
Sbjct: 322 AAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVES 381
Query: 287 ---------------CGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQ 331
CG ID A RVF I + ++L SWNSM G + +G + LE + Q
Sbjct: 382 YDTILLNSMIKVYFSCGRIDDAKRVFERIEN-KSLISWNSMTNGFSQNGCTVETLEYFHQ 440
Query: 332 MLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAG 391
M + D+V+ ++ AC +E G +F + T + ++DL + G
Sbjct: 441 MHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCG 499
Query: 392 KLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ V TM +K D V W +++ + +G
Sbjct: 500 FVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 144/323 (44%), Gaps = 60/323 (18%)
Query: 132 FIKSGF-APDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDG 190
+K GF + V A LL MY++ G + +AR LFDEMP R +WN M+ G+ G+
Sbjct: 52 LLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGT 111
Query: 191 ALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLF------------------------ 226
+L F +MP R+ SW ++SG++K + A LF
Sbjct: 112 SLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYA 171
Query: 227 ---LRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEM 283
LR+ E + +A+TL ++L ACA L AL+ G+++ A G + ++++++ +
Sbjct: 172 EEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNV 231
Query: 284 YAKCGHIDVAWRVFNEI------------------------------GSLRNLCSWNSMI 313
YAKCG + +A + +I S R + WNSMI
Sbjct: 232 YAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMI 291
Query: 314 MGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNI 373
G + +AL L+++M R T D T ++ AC G +E G+ + F +
Sbjct: 292 SGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQM-HCHACKFGL 349
Query: 374 IPKLEHYGCMVDLLGRAGKLREA 396
I + ++D+ + G EA
Sbjct: 350 IDDIVVASTLLDMYSKCGSPMEA 372
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLY-VSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
+L +C++ + ++ K GF ++ V+N +L+MY++ G + +A +F+E+
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPD- 90
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
RN SWN+MI G G+ G +L +D M +V G A G + R +
Sbjct: 91 RNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKA----GELSVARRL 146
Query: 364 FKSM-KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACS 420
F +M + D + L H G +++ G EA + + + D++ T+L AC+
Sbjct: 147 FNAMPEKDVVTLNSLLH-GYILN-----GYAEEALRLFKELNFSADAITLTTVLKACA 198
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 249/502 (49%), Gaps = 49/502 (9%)
Query: 27 VKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVF---------LYNKLL 77
+KQ+H +++ G D ++ + +Y++ L S + +N ++
Sbjct: 157 IKQLHCFSVSGGFDSYSSVNNAFVT----YYSKGGLLREAVSVFYGMDELRDEVSWNSMI 212
Query: 78 QAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGF 137
AY +LY +M G + + G+ H IK+GF
Sbjct: 213 VAYGQHKEGAKA-LALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271
Query: 138 APDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRL 197
+ + L+D Y+K G + ++D V F+
Sbjct: 272 HQNSHVGSGLIDFYSKCGGCD---GMYDSEKV-------------------------FQE 303
Query: 198 MPSRNVVSWTTMISGYSKNKQY-EKALGLFLRMECEEDIMPNAVTLASILPACANLGALE 256
+ S ++V W TMISGYS N++ E+A+ F +M+ P+ + + AC+NL +
Sbjct: 304 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQ-RIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 257 IGQRVEAYARKNGFFKN-LYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMG 315
+++ A K+ N + V+NA++ +Y K G++ A VF+ + L N S+N MI G
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL-NAVSFNCMIKG 421
Query: 316 LAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIP 375
A HG +AL LY +ML G P+ +TFV +L AC H G V++G+ F +MK F I P
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP 481
Query: 376 KLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESL 435
+ EHY CM+DLLGRAGKL EA I MP KP SV W LLGAC H N+ LAE AA L
Sbjct: 482 EAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANEL 541
Query: 436 FTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVE 495
++P YV+L+N+YA A +W+ +A +RK M+G +I K G S++E + H F+ E
Sbjct: 542 MVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAE 601
Query: 496 DRSHPKSNEIFALLDGVYEMFK 517
D SHP E+ L+ EM K
Sbjct: 602 DWSHPMIREVNEYLE---EMMK 620
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 161/320 (50%), Gaps = 14/320 (4%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ LHA ++KS A + + +++Y+K G L AR F V ++N ++ +A+
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
+ A +LF +P + VS+ T+ISGY+ ++ A+ LF RM + + TL+
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR-KLGFEVDGFTLSG 145
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ AC + +++ +++ ++ GF V+NA + Y+K G + A VF + LR
Sbjct: 146 LIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ SWNSMI+ H + KAL LY +M+ +G D T +L A T + GR
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 365 -KSMKTDFNIIPKLEHYGC-MVDLLGRAGKLREAYE---VIQTMPMKPDSVIWGTLLGAC 419
K +K F+ + H G ++D + G Y+ V Q + + PD V+W T++
Sbjct: 264 GKLIKAGFH---QNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISGY 319
Query: 420 SFHGNVELAEIAAESLFTLE 439
S N EL+E A +S ++
Sbjct: 320 SM--NEELSEEAVKSFRQMQ 337
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 233/468 (49%), Gaps = 47/468 (10%)
Query: 30 IHGYTLRTGIDQ----TKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXX 85
+HG+ ++TG + + L+ + ++Y V P V + L+ +
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 86 XXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP------ 139
+ +M+ G N+ G+ H GF P
Sbjct: 189 FSDA-IEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKV 247
Query: 140 --DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRL 197
+V AT+L+DMYAK G L AR LF DG
Sbjct: 248 GFNVILATSLIDMYAKCGDLRTARYLF------------------------DG------- 276
Query: 198 MPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
MP R +VSW ++I+GYS+N E+AL +FL M + I P+ VT S++ A G ++
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDM-LDLGIAPDKVTFLSVIRASMIQGCSQL 335
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLA 317
GQ + AY K GF K+ + A++ MYAK G + A + F ++ ++ +W +I+GLA
Sbjct: 336 GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK-KDTIAWTVVIIGLA 394
Query: 318 VHGKCGKALELYDQMLREG-TTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPK 376
HG +AL ++ +M +G TPD +T++G+L AC+H G+VE+G+ F M+ + P
Sbjct: 395 SHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPT 454
Query: 377 LEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLF 436
+EHYGCMVD+L RAG+ EA +++TMP+KP+ IWG LL C H N+EL + +
Sbjct: 455 VEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVA 514
Query: 437 TLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
E G YV+LSNIYA A +W V +R+ MK ++ K GHS +E
Sbjct: 515 EPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/548 (22%), Positives = 220/548 (40%), Gaps = 97/548 (17%)
Query: 26 QVKQIHGYTLRTGIDQTKTLIEKLL-------EIPNLHYAQAVLHHSPNSTVFLYNKLLQ 78
++ Q+HG +++ + + + +L+ E NL YA++V +V+++N +++
Sbjct: 21 ELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIR 80
Query: 79 AYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFA 138
Y Y +M G+SP+ + G +H +K+GF
Sbjct: 81 GYSNSPNPDKALI-FYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFE 139
Query: 139 PDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLM 198
+++ +T LL MY G + R+F+++P V W ++++G A+E FR M
Sbjct: 140 VNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREM 199
Query: 199 PSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG 258
S V + N + +L AC + G
Sbjct: 200 QSNGVKA--------------------------------NETIMVDLLVACGRCKDIVTG 227
Query: 259 QRVEAYARKNGF---FK-----NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWN 310
+ + + GF F+ N+ ++ ++++MYAKCG + A +F+ + R L SWN
Sbjct: 228 KWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPE-RTLVSWN 286
Query: 311 SMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF------ 364
S+I G + +G +AL ++ ML G PD VTF+ ++ A G + G+ I
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT 346
Query: 365 ----------------------KSMKTDFNIIPKLEHYGCMVDLLGRA--GKLREAYEVI 400
+S K F + K + V ++G A G EA +
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 401 QTMPMK----PDSVIWGTLLGACSFHGNVELAE---IAAESLFTLEPRNPGNYVILSNIY 453
Q M K PD + + +L ACS G VE + L LEP +Y + +I
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEP-TVEHYGCMVDIL 465
Query: 454 ASADQWDGVAKLRKVMK--------GSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEI 505
+ A +++ +L K M G+ + H LE ++ + E + I
Sbjct: 466 SRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAE--PEELGSGI 523
Query: 506 FALLDGVY 513
+ LL +Y
Sbjct: 524 YVLLSNIY 531
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 248/487 (50%), Gaps = 38/487 (7%)
Query: 28 KQIHGYTLRTG--IDQTKT--LIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
K +HG L+T +D L++ ++ ++ A V + P + V ++ ++ +
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
L+ +MR PN++ G+ LH +K GF D++
Sbjct: 327 GFCNEA-VDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYV 385
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
+ AL+D+YAK + D A++LF + S+N
Sbjct: 386 SNALIDVYAKCEKM-------------------------------DTAVKLFAELSSKNE 414
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
VSW T+I GY + KA +F R + VT +S L ACA+L ++++G +V
Sbjct: 415 VSWNTVIVGYENLGEGGKAFSMF-REALRNQVSVTEVTFSSALGACASLASMDLGVQVHG 473
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
A K K + VSN++++MYAKCG I A VFNE+ ++ ++ SWN++I G + HG
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI-DVASWNALISGYSTHGLGR 532
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
+AL + D M P+ +TF+G+L C++ G++++G+ F+SM D I P LEHY CM
Sbjct: 533 QALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCM 592
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
V LLGR+G+L +A ++I+ +P +P +IW +L A N E A +AE + + P++
Sbjct: 593 VRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDE 652
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSN 503
YV++SN+YA A QW VA +RK MK + K G S++E G +H F V HP
Sbjct: 653 ATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMK 712
Query: 504 EIFALLD 510
I +L+
Sbjct: 713 LINGMLE 719
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 136/329 (41%), Gaps = 45/329 (13%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
LYS++ GH N + LH+ +K G+ + F AL++ Y+
Sbjct: 133 LYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYS 192
Query: 153 KVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISG 212
G+ VD A +F + +++V W ++S
Sbjct: 193 VCGS-------------------------------VDSARTVFEGILCKDIVVWAGIVSC 221
Query: 213 YSKNKQYEKALGLF--LRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGF 270
Y +N +E +L L +RM MPN T + L A LGA + + V K +
Sbjct: 222 YVENGYFEDSLKLLSCMRMA---GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY 278
Query: 271 FKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYD 330
+ V +L++Y + G + A++VFNE+ ++ W+ MI +G C +A++L+
Sbjct: 279 VLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPK-NDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 331 QMLREGTTPDDVTFVGLLLACTHG---GMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLL 387
+M P++ T +L C G G+ E+ + + D +I ++D+
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS----NALIDVY 393
Query: 388 GRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
+ K+ A ++ + K + V W T++
Sbjct: 394 AKCEKMDTAVKLFAELSSK-NEVSWNTVI 421
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
+ +H +K G D+FA LL+ Y K G FD+
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAG--------FDK------------------ 101
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECE-EDIMPNAVTLA 243
AL LF MP RN VS+ T+ GY+ + +GL+ R+ E ++ P+ T
Sbjct: 102 -----DALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFT-- 150
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
S L +L EI + + K G+ N +V A++ Y+ CG +D A VF I
Sbjct: 151 SFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI-LC 209
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVE--KGR 361
+++ W ++ +G +L+L M G P++ TF L A G + KG
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV 269
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
H + +KT + + P++ G ++ L + G + +A++V MP K D V W ++
Sbjct: 270 H-GQILKTCYVLDPRV-GVG-LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIA 321
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/465 (32%), Positives = 240/465 (51%), Gaps = 52/465 (11%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
++ +M L G PN G +H+ +K GF DV +L+DM
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDM 396
Query: 151 YAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRN----VVSW 206
Y+K G LE AR++FD + ++V TWN+M+ G+ + G A ELF M N +++W
Sbjct: 397 YSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW 456
Query: 207 TTMISGYSKNKQYEKALGLFLRMECEEDI------------------------------- 235
TMISGY KN +A+ LF RME + +
Sbjct: 457 NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Query: 236 ----MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHID 291
MPN+VT+ S+LPACANL ++ + + + V NA+ + YAK G I+
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE 576
Query: 292 VAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLAC 351
+ +F + + +++ +WNS+I G +HG G AL L++QM +G TP+ T ++LA
Sbjct: 577 YSRTIFLGMET-KDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAH 635
Query: 352 THGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVI 411
G V++G+ +F S+ D++IIP LEH MV L GRA +L EA + IQ M ++ ++ I
Sbjct: 636 GLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPI 695
Query: 412 WGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKG 471
W + L C HG++++A AAE+LF+LEP N I+S IYA AKL + ++G
Sbjct: 696 WESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALG------AKLGRSLEG 749
Query: 472 SQ------ITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
++ + K G S++E +H F D+S ++ ++ L++
Sbjct: 750 NKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVE 794
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 42/301 (13%)
Query: 125 GQMLHAHFIKSGF--APDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
G++LHA F G PDVF T LL MYAK G + AR++FD M RE
Sbjct: 100 GRILHARF---GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSM--RE----------- 143
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
RN+ +W+ MI YS+ ++ + LF R+ ++ ++P+
Sbjct: 144 ------------------RNLFTWSAMIGAYSRENRWREVAKLF-RLMMKDGVLPDDFLF 184
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
IL CAN G +E G+ + + K G L VSN++L +YAKCG +D A + F +
Sbjct: 185 PKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRE 244
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
R++ +WNS+++ +GK +A+EL +M +EG +P VT+ L+ G +
Sbjct: 245 -RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMD 303
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLLGAC 419
+ + M+T F I + + M+ L G +A ++ + M + P++V + + AC
Sbjct: 304 LMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Query: 420 S 420
S
Sbjct: 363 S 363
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 252/504 (50%), Gaps = 56/504 (11%)
Query: 29 QIHGYTLRTGIDQTKTLIEKLLEIP------NLHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
QIHG + + +I +L+ + +L +A+ +L HS +ST +N L + Y
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSS 90
Query: 83 XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVF 142
+ +YS+M+ G PN+ G+ + +K GF DV+
Sbjct: 91 SDSPVESIW-VYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVY 149
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRN 202
L+ +Y AR++FDEM RN
Sbjct: 150 VGNNLIHLYGTCKKTSDARKVFDEMT-------------------------------ERN 178
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECE---EDIMPNAVTLASILPACANLGALEIGQ 259
VVSW ++++ +N + L L CE + P+ T+ +L AC G L +G+
Sbjct: 179 VVSWNSIMTALVENGK----LNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGK 232
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
V + N + A+++MYAK G ++ A VF + +N+ +W++MI+GLA +
Sbjct: 233 LVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVD-KNVWTWSAMIVGLAQY 291
Query: 320 GKCGKALELYDQMLREGTT-PDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLE 378
G +AL+L+ +M++E + P+ VTF+G+L AC+H G+V+ G F M+ I P +
Sbjct: 292 GFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMI 351
Query: 379 HYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE---LAEIAAESL 435
HYG MVD+LGRAG+L EAY+ I+ MP +PD+V+W TLL ACS H + + + E + L
Sbjct: 352 HYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRL 411
Query: 436 FTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVE 495
LEP+ GN VI++N +A A W A++R+VMK +++ K AG S LE GG H+F
Sbjct: 412 IELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG 471
Query: 496 DRSHPKSNEIFALLDGVYEMFKFN 519
+ I+ LLD +FKF
Sbjct: 472 YDPRSEYVSIYELLD----LFKFQ 491
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 133/348 (38%), Positives = 211/348 (60%), Gaps = 7/348 (2%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
+V A + +L +Y +E AR+ F+++P + W+ MM+G+ R GDV A +F +
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVF 235
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
+R++V W T+I+GY++N + A+ F M+ E P+AVT++SIL ACA G L++G+
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ-GEGYEPDAVTVSSILSACAQSGRLDVGR 294
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
V + G N +VSNA+++MYAKCG ++ A VF I S+R++ NSMI LA+H
Sbjct: 295 EVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESI-SVRSVACCNSMISCLAIH 353
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
GK +ALE++ M PD++TF+ +L AC HGG + +G IF MKT ++ P ++H
Sbjct: 354 GKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKH 412
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFT-- 437
+GC++ LLGR+GKL+EAY +++ M +KP+ + G LLGAC H + E+AE + + T
Sbjct: 413 FGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAG 472
Query: 438 --LEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
+ + +SN+YA ++W LR M+ + KS G S L
Sbjct: 473 SITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 154/334 (46%), Gaps = 45/334 (13%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G++LH+ IK G DV ++L+ MY K G + AR++FDEMP R V TWNAM+ G+
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 185 FGDVDGALELF-RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
GD A LF + RN V+W MI GY K + EKA LF RM E + N +
Sbjct: 125 NGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE---LKNVKAWS 181
Query: 244 SILPACANLGALEIGQR-VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+L N +E ++ E KN F +L +S Y + G + A +F + +
Sbjct: 182 VMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSG-----YFRIGDVHEARAIFYRVFA 236
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
R+L WN++I G A +G A++ + M EG PD VT +L AC G ++ GR
Sbjct: 237 -RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 363 I----------------------------FKSMKTDFNIIPKLEHYGC--MVDLLGRAGK 392
+ ++ + F I C M+ L GK
Sbjct: 296 VHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGK 355
Query: 393 LREAYEVIQTMP---MKPDSVIWGTLLGACSFHG 423
+EA E+ TM +KPD + + +L AC HG
Sbjct: 356 GKEALEMFSTMESLDLKPDEITFIAVLTAC-VHG 388
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 116/294 (39%), Gaps = 37/294 (12%)
Query: 50 LEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXX 109
I ++H A+A+ + + ++N L+ Y + ++ M+ G+ P+
Sbjct: 219 FRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN-MQGEGYEPDAVTV 277
Query: 110 XXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPV 169
G+ +H+ G + F + AL+DMYAK G LE A +F+ + V
Sbjct: 278 SSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISV 337
Query: 170 REVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRM 229
R V N+M++ A G ALE+F M S
Sbjct: 338 RSVACCNSMISCLAIHGKGKEALEMFSTMESL---------------------------- 369
Query: 230 ECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGH 289
D+ P+ +T ++L AC + G L G ++ + + N+ ++ + + G
Sbjct: 370 ----DLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGK 425
Query: 290 IDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
+ A+R+ E+ N +++ VH E+ +Q+++ T +T
Sbjct: 426 LKEAYRLVKEMHVKPNDTVLGALLGACKVH----MDTEMAEQVMKIIETAGSIT 475
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 95/185 (51%), Gaps = 9/185 (4%)
Query: 245 ILPACANL-GALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
IL ACA + + +G+ + + + K G ++ V ++++ MY KCG + A +VF+E+
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPE- 109
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
RN+ +WN+MI G +G A L++++ + VT++ ++ +EK R +
Sbjct: 110 RNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKAREL 166
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
F+ M + + ++ + M+ + K+ +A + + +P K ++ +W ++ G
Sbjct: 167 FERMPFE---LKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEK-NAFVWSLMMSGYFRIG 222
Query: 424 NVELA 428
+V A
Sbjct: 223 DVHEA 227
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 219/414 (52%), Gaps = 36/414 (8%)
Query: 71 FLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHA 130
FL+N ++++Y +Y M P++Y G+ LH+
Sbjct: 83 FLWNNIMRSYIRHESPLD-AIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 131 HFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDG 190
++ GF D F + + +Y K G E AR++FDE P
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENP---------------------- 179
Query: 191 ALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACA 250
R + SW +I G + + +A+ +F+ M+ + P+ T+ S+ +C
Sbjct: 180 ---------ERKLGSWNAIIGGLNHAGRANEAVEMFVDMK-RSGLEPDDFTMVSVTASCG 229
Query: 251 NLGALEIGQRVE--AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCS 308
LG L + ++ K ++ + N++++MY KCG +D+A +F E+ RN+ S
Sbjct: 230 GLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQ-RNVVS 288
Query: 309 WNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMK 368
W+SMI+G A +G +ALE + QM G P+ +TFVG+L AC HGG+VE+G+ F MK
Sbjct: 289 WSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMK 348
Query: 369 TDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
++F + P L HYGC+VDLL R G+L+EA +V++ MPMKP+ ++WG L+G C G+VE+A
Sbjct: 349 SEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Query: 429 EIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSF 482
E A + LEP N G YV+L+N+YA W V ++RK+MK ++ K +S+
Sbjct: 409 EWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 249/490 (50%), Gaps = 36/490 (7%)
Query: 25 NQVKQIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSPNSTVFL-YNKLLQA 79
N +KQ+H L+ G+ T+ ++ + ++ A+ V S + +N ++
Sbjct: 220 NLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAG 279
Query: 80 YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
+ F L+ QM+ + Y G+ LH IK G
Sbjct: 280 FSKHELKESA-FELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ 338
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
A AL+ MY + PT G ++ AL LF +
Sbjct: 339 VTSATNALISMYI------------------QFPT-----------GTMEDALSLFESLK 369
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
S++++SW ++I+G+++ E A+ F + E I + +++L +C++L L++GQ
Sbjct: 370 SKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE-IKVDDYAFSALLRSCSDLATLQLGQ 428
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
++ A A K+GF N +V ++++ MY+KCG I+ A + F +I S + +WN+MI+G A H
Sbjct: 429 QIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G +L+L+ QM + D VTF +L AC+H G++++G + M+ + I P++EH
Sbjct: 489 GLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEH 548
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
Y VDLLGRAG + +A E+I++MP+ PD ++ T LG C G +E+A A L +E
Sbjct: 549 YAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIE 608
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSH 499
P + YV LS++Y+ +W+ A ++K+MK + K G S++E Q+ F EDRS+
Sbjct: 609 PEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSN 668
Query: 500 PKSNEIFALL 509
P +I+ ++
Sbjct: 669 PLCQDIYMMI 678
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 143/345 (41%), Gaps = 47/345 (13%)
Query: 31 HGYTLRTG----IDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXX 86
H Y ++ G I + +++ ++ L YA + P +N ++ Y
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 87 XXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATA 146
+ L++ M+ G + Y G+ +H IK G+ +V+ ++
Sbjct: 83 EDA-WCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 147 LLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSW 206
L+DMYAK +E A E F+ + N VSW
Sbjct: 142 LVDMYAKCERVE-------------------------------DAFEAFKEISEPNSVSW 170
Query: 207 TTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYAR 266
+I+G+ + + + A L ME + + +A T A +L + + ++V A
Sbjct: 171 NALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVL 230
Query: 267 KNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKAL 326
K G + + NA++ YA CG + A RVF+ +G ++L SWNSMI G + H A
Sbjct: 231 KLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAF 290
Query: 327 ELYDQMLREGTTPDDVTFVGLLLACT-----------HGGMVEKG 360
EL+ QM R D T+ GLL AC+ HG +++KG
Sbjct: 291 ELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKG 335
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 132/315 (41%), Gaps = 40/315 (12%)
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG 186
+ H + IK G D++ + +LD Y K G L A LFDE
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDE-------------------- 60
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRME-CEEDIMPNAVTLASI 245
MP R+ VSW TMISGY+ + E A LF M+ D+ + + + +
Sbjct: 61 -----------MPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDV--DGYSFSRL 107
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
L A++ ++G++V K G+ N+YV +++++MYAKC ++ A+ F EI S N
Sbjct: 108 LKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEI-SEPN 166
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQM-LREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
SWN++I G A L M ++ T D TF LL + +
Sbjct: 167 SVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVH 226
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+ + ++ M+ G + +A V + D + W +++ S H
Sbjct: 227 AKV-LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH-- 283
Query: 425 VELAEIAAESLFTLE 439
EL E A E ++
Sbjct: 284 -ELKESAFELFIQMQ 297
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 266/551 (48%), Gaps = 53/551 (9%)
Query: 7 TTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVL 62
T ST + ++ G+ + KQ H + G++ L LL ++ + YA+ V
Sbjct: 273 TRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVF 332
Query: 63 HHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXX 122
V +N ++ Y + + MRL +
Sbjct: 333 DRMFEKDVVTWNLIISGYVQQGLVEDAIY-MCQLMRLEKLKYDCVTLATLMSAAARTENL 391
Query: 123 XXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
G+ + + I+ F D+ A+ ++DMYAK G++ A+++FD +++ WN ++A +
Sbjct: 392 KLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAY 451
Query: 183 A-----------------------------------RFGDVDGALELFRLMPSR----NV 203
A R G VD A ++F M S N+
Sbjct: 452 AESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNL 511
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
+SWTTM++G +N E+A+ LFLR E + PNA ++ L ACA+L +L IG+ +
Sbjct: 512 ISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHG 570
Query: 264 YARKNGFFKNLY-VSNAVLEMYAKCGHIDVAWRVFNEIGS--LRNLCSWNSMIMGLAVHG 320
Y +N +L + ++++MYAKCG I+ A +VF GS L N+MI A++G
Sbjct: 571 YIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVF---GSKLYSELPLSNAMISAYALYG 627
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
+A+ LY + G PD++T +L AC H G + + IF + + ++ P LEHY
Sbjct: 628 NLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHY 687
Query: 381 GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEP 440
G MVDLL AG+ +A +I+ MP KPD+ + +L+ +C+ EL + + L EP
Sbjct: 688 GLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEP 747
Query: 441 RNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQ--LHKFIVEDRS 498
N GNYV +SN YA WD V K+R++MK + K G S+++ G+ +H F+ D++
Sbjct: 748 ENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKT 807
Query: 499 HPKSNEIFALL 509
H + NEI +L
Sbjct: 808 HTRINEIQMML 818
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 181/400 (45%), Gaps = 42/400 (10%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEIPN----LHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
+ +HGY +++G++ + L ++ L A V P+ +N L+ Y
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
L+S MR G P + G+ HA I +G D
Sbjct: 253 GKNEEA-IRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL 311
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
T+LL+ Y KVG +E A +FD M ++V
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMF-------------------------------EKDV 340
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
V+W +ISGY + E A+ + M E+ + + VTLA+++ A A L++G+ V+
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYMCQLMRLEK-LKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
Y ++ F ++ +++ V++MYAKCG I A +VF+ ++L WN+++ A G G
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE-KDLILWNTLLAAYAESGLSG 458
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
+AL L+ M EG P+ +T+ ++L+ G V++ + +F M++ IIP L + M
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTM 517
Query: 384 VDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGACS 420
++ + + G EA ++ M ++P++ L AC+
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 142/311 (45%), Gaps = 47/311 (15%)
Query: 125 GQMLHAHFIKSG--FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
G+ +HA +K+G +A + + T L+ YAK LE+A LF ++ VR
Sbjct: 89 GKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVR------------ 136
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
NV SW +I + E AL F+ M E +I P+ +
Sbjct: 137 -------------------NVFSWAAIIGVKCRIGLCEGALMGFVEM-LENEIFPDNFVV 176
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
++ AC L G+ V Y K+G ++V++++ +MY KCG +D A +VF+EI
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
RN +WN++++G +GK +A+ L+ M ++G P VT L A + G VE+G+
Sbjct: 237 -RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
Query: 363 -----IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
I M+ D + L ++ C V L+ E E++ + D V W ++
Sbjct: 296 SHAIAIVNGMELDNILGTSLLNFYCKVGLI-------EYAEMVFDRMFEKDVVTWNLIIS 348
Query: 418 ACSFHGNVELA 428
G VE A
Sbjct: 349 GYVQQGLVEDA 359
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/560 (30%), Positives = 269/560 (48%), Gaps = 79/560 (14%)
Query: 28 KQIHGYTLRTGIDQTK-----TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
K+IH L++ ++ LI + A+ +L N+ V +N L++ Y
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 83 XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP--- 139
+S M GH ++ G LHA+ IK G+
Sbjct: 364 NLMYKEA-LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 140 ----------------------------DVFAATALLDMYAK----VGTLELARRL---- 163
D+ + T ++ YA+ V LEL R +
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 164 --FDEMP----------------VREV------------PTWNAMMAGHARFGDVDGALE 193
DEM V+E+ N ++ + + ++ A
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATR 542
Query: 194 LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
+F + ++VVSWT+MIS + N +A+ LF RM E + ++V L IL A A+L
Sbjct: 543 VFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM-VETGLSADSVALLCILSAAASLS 601
Query: 254 ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
AL G+ + Y + GF ++ AV++MYA CG + A VF+ I + L + SMI
Sbjct: 602 ALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI-ERKGLLQYTSMI 660
Query: 314 MGLAVHGKCGKA-LELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFN 372
+HG CGKA +EL+D+M E +PD ++F+ LL AC+H G++++GR K M+ ++
Sbjct: 661 NAYGMHG-CGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 719
Query: 373 IIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAA 432
+ P EHY C+VD+LGRA + EA+E ++ M +P + +W LL AC H E+ EIAA
Sbjct: 720 LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAA 779
Query: 433 ESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKF 492
+ L LEP+NPGN V++SN++A +W+ V K+R MK S + K G S++E G++HKF
Sbjct: 780 QRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKF 839
Query: 493 IVEDRSHPKSNEIFALLDGV 512
D+SHP+S EI+ L V
Sbjct: 840 TARDKSHPESKEIYEKLSEV 859
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 128/294 (43%), Gaps = 36/294 (12%)
Query: 125 GQMLHAHFIKS--GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
G+ LH+ K+ F D F A L+ MY K G+L+ A ++FDEMP R WN M+ +
Sbjct: 99 GRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAY 157
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
G+ AL L+ W + G LGL +
Sbjct: 158 VSNGEPASALALY----------WNMRVEGV--------PLGL--------------SSF 185
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
++L ACA L + G + + K G+ ++ NA++ MYAK + A R+F+
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
+ WNS++ + GK + LEL+ +M G P+ T V L AC + G+
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
I S+ +L ++ + R GK+ +A +++ M D V W +L+
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 156/356 (43%), Gaps = 42/356 (11%)
Query: 72 LYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAH 131
L+N +L +Y L+ +M + G +PN Y G+ +HA
Sbjct: 251 LWNSILSSYSTSGKSLET-LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 309
Query: 132 FIKSG-FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDG 190
+KS + +++ AL+ MY + G +MP E
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCG----------KMPQAE------------------- 340
Query: 191 ALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACA 250
+ R M + +VV+W ++I GY +N Y++AL F M + V++ SI+ A
Sbjct: 341 --RILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM-IAAGHKSDEVSMTSIIAASG 397
Query: 251 NLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWN 310
L L G + AY K+G+ NL V N +++MY+KC R F + ++L SW
Sbjct: 398 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD-KDLISWT 456
Query: 311 SMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT--HGGMVEKGRHIFKSMK 368
++I G A + +ALEL+ + ++ D++ +L A + ++ K H K
Sbjct: 457 TVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK 516
Query: 369 TDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+ + + E +VD+ G+ + A V +++ K D V W +++ + + +GN
Sbjct: 517 GLLDTVIQNE----LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGN 567
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 26/266 (9%)
Query: 226 FLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKN-GFFKNLYVSNAVLEMY 284
F R++ E+ P A +L C A+ G+++ + K F+ +++ ++ MY
Sbjct: 68 FQRLDVSENNSP-VEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMY 126
Query: 285 AKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTF 344
KCG +D A +VF+E+ R +WN+MI +G+ AL LY M EG +F
Sbjct: 127 GKCGSLDDAEKVFDEMPD-RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 345 VGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYG------CMVDLLGRAGKLREAYE 398
LL AC + G + +++ KL ++ +V + + L A
Sbjct: 186 PALLKACAKLRDIRSGSELH-------SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 238
Query: 399 VIQTMPMKPDSVIWGTLLGACSFHG-NVELAEIAAESLFTLEPRNPGNYVILSNIYASAD 457
+ K D+V+W ++L + S G ++E E+ E T P +Y I+S + A
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPA--PNSYTIVSALTAC-- 294
Query: 458 QWDGV--AKLRKVMKGSQITKSAGHS 481
DG AKL K + S + KS+ HS
Sbjct: 295 --DGFSYAKLGKEIHAS-VLKSSTHS 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 8/218 (3%)
Query: 27 VKQIHGYTLRTGIDQT---KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
VK+IH + LR G+ T L++ + N+ YA V V + ++ +
Sbjct: 506 VKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS-SAL 564
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
L+ +M G S + G+ +H + ++ GF +
Sbjct: 565 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
A A++DMYA G L+ A+ +FD + + + + +M+ + G A+ELF M NV
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684
Query: 204 ----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
+S+ ++ S ++ G ME E ++ P
Sbjct: 685 SPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEP 722
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 205/345 (59%), Gaps = 3/345 (0%)
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
N ++ +++ D+ AL +FR ++ +W ++ISGY++ + E+A L LR
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHL-LREMLVAGF 377
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNL-YVSNAVLEMYAKCGHIDVAW 294
PN++TLASILP CA + L+ G+ Y + FK+ + N+++++YAK G I VA
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI-VAA 436
Query: 295 RVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
+ +++ S R+ ++ S+I G G+ G AL L+ +M R G PD VT V +L AC+H
Sbjct: 437 KQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHS 496
Query: 355 GMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGT 414
+V +G +F M+ ++ I P L+H+ CMVDL GRAG L +A ++I MP KP W T
Sbjct: 497 KLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWAT 556
Query: 415 LLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQI 474
LL AC HGN ++ + AAE L ++P NPG YV+++N+YA+A W +A++R +M+ +
Sbjct: 557 LLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGV 616
Query: 475 TKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFKFN 519
K G ++++ F V D S P++ + LLDG+ ++ K N
Sbjct: 617 KKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDN 661
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 183/399 (45%), Gaps = 18/399 (4%)
Query: 29 QIHGYTLRTGIDQTKTLIEKLLEIP---NLH-YAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
Q+H + + +G++ L+ KL+ NLH AQ+++ +S +N L+ +Y
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123
Query: 85 XXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAA 144
+ Y +M G P+ + G+++H S + ++
Sbjct: 124 LFEEV-IAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVC 182
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLM----PS 200
AL+ MY + + +ARRLFD M R+ +WNA++ +A G A ELF M
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRME-CEEDIMPNAVTLASILPACANLGALEIGQ 259
+V++W + G + Y ALGL RM + P A+ + L AC+ +GA+ +G+
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG--LKACSLIGAIRLGK 300
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
+ A + + V N ++ MY+KC + A VF + +LC+WNS+I G A
Sbjct: 301 EIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEE-NSLCTWNSIISGYAQL 359
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR--HIFKSMKTDFNIIPKL 377
K +A L +ML G P+ +T +L C ++ G+ H + + F L
Sbjct: 360 NKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML 419
Query: 378 EHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
+ +VD+ ++GK+ A +V M K D V + +L+
Sbjct: 420 --WNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLI 455
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 131/324 (40%), Gaps = 46/324 (14%)
Query: 11 FSTLRNPNSKNIGMNQV---------KQIHGYTLRT---GIDQTK-TLIEKLLEIPNLHY 57
F T +P + IG+ K+IHG + + GID + TLI + +L +
Sbjct: 274 FPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRH 333
Query: 58 AQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXX 117
A V + +++ +N ++ Y L +M + G PN
Sbjct: 334 ALIVFRQTEENSLCTWNSIISGYAQLNKSEEASH-LLREMLVAGFQPNSITLASILPLCA 392
Query: 118 XXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNA 177
G+ H + ++ R+ F + + WN+
Sbjct: 393 RIANLQHGKEFHCYILR--------------------------RKCFKDYTM----LWNS 422
Query: 178 MMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
++ +A+ G + A ++ LM R+ V++T++I GY + AL LF M I P
Sbjct: 423 LVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMT-RSGIKP 481
Query: 238 NAVTLASILPACANLGALEIGQRVEAYAR-KNGFFKNLYVSNAVLEMYAKCGHIDVAWRV 296
+ VT+ ++L AC++ + G+R+ + + G L + ++++Y + G + A +
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDI 541
Query: 297 FNEIGSLRNLCSWNSMIMGLAVHG 320
+ + + +W +++ +HG
Sbjct: 542 IHNMPYKPSGATWATLLNACHIHG 565
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 217/390 (55%), Gaps = 33/390 (8%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
+H+ ++ GF +V A AL++MY K G + A+R+FD+ HA+
Sbjct: 259 VHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDT--------------HAQ--- 301
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
N+ TT++ Y ++K +E+AL LF +M+ +E + PN T A +L
Sbjct: 302 --------------NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE-VPPNEYTFAILLN 346
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLC 307
+ A L L+ G + K+G+ ++ V NA++ MYAK G I+ A + F+ + + R++
Sbjct: 347 SIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGM-TFRDIV 405
Query: 308 SWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM 367
+WN+MI G + HG +ALE +D+M+ G P+ +TF+G+L AC+H G VE+G H F +
Sbjct: 406 TWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQL 465
Query: 368 KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVEL 427
F++ P ++HY C+V LL +AG ++A + ++T P++ D V W TLL AC N L
Sbjct: 466 MKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRL 525
Query: 428 AEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGG 487
+ AE P + G YV+LSNI+A + +W+GVAK+R +M + K G S++
Sbjct: 526 GKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRN 585
Query: 488 QLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
Q H F+ ED HP+ I+A + V K
Sbjct: 586 QTHVFLAEDNQHPEITLIYAKVKEVMSKIK 615
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 44/252 (17%)
Query: 11 FSTLRNPNSKNIGMNQVKQIHGYTLRTG----IDQTKTLIEKLLEIPNLHYAQAVLHHSP 66
FS LR+ +N Q+H +R G ++ LI + + YAQ V +
Sbjct: 247 FSNLRD-------LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTH 299
Query: 67 NSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQ 126
+FL ++ AY +L+S+M PN+Y G
Sbjct: 300 AQNIFLNTTIMDAYFQDKSFEEA-LNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGD 358
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG 186
+LH +KSG+ V AL++MYAK G++E AR+ F M R++ TWN M++G + G
Sbjct: 359 LLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHG 418
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
ALE F M + +G +PN +T +L
Sbjct: 419 LGREALEAFDRM----------IFTGE----------------------IPNRITFIGVL 446
Query: 247 PACANLGALEIG 258
AC+++G +E G
Sbjct: 447 QACSHIGFVEQG 458
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 147/362 (40%), Gaps = 47/362 (12%)
Query: 93 LYSQMRLLGHS-PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMY 151
L+ M G S PN++ G+ H F+K G F L+ MY
Sbjct: 122 LFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMY 181
Query: 152 AKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMIS 211
+ A R+ D++P ++ +++ ++G+ G L++
Sbjct: 182 SLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDV----------------- 224
Query: 212 GYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFF 271
LR ED + N +T S L +NL L + +V + + GF
Sbjct: 225 ---------------LRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFN 269
Query: 272 KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC-GKALELYD 330
+ A++ MY KCG + A RVF++ + +N+ N+ IM K +AL L+
Sbjct: 270 AEVEACGALINMYGKCGKVLYAQRVFDDTHA-QNI-FLNTTIMDAYFQDKSFEEALNLFS 327
Query: 331 QMLREGTTPDDVTFVGLLLACTHGGMVEKGR----HIFKSMKTDFNIIPKLEHYGCMVDL 386
+M + P++ TF LL + ++++G + KS + ++ +V++
Sbjct: 328 KMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVG-----NALVNM 382
Query: 387 LGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG-NVELAEIAAESLFTLEPRNPGN 445
++G + +A + M + D V W T++ CS HG E E +FT E N
Sbjct: 383 YAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRIT 441
Query: 446 YV 447
++
Sbjct: 442 FI 443
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 36/278 (12%)
Query: 125 GQMLHAHFI---KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAG 181
G+ +HAH I +S A D + +L+++Y K AR+LFD MP R V +W AMM G
Sbjct: 50 GESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKG 109
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+ G L+LF+ M SG S+ PN
Sbjct: 110 YQNSGFDFEVLKLFKSM----------FFSGESR---------------------PNEFV 138
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
+ +C+N G +E G++ K G + +V N ++ MY+ C A RV +++
Sbjct: 139 ATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLP 198
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
+L ++S + G G + L++ + E +++T++ L ++ +
Sbjct: 199 YC-DLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLAL 257
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEV 399
+ M F ++E G ++++ G+ GK+ A V
Sbjct: 258 QVHSRM-VRFGFNAEVEACGALINMYGKCGKVLYAQRV 294
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 242 LASILPACANLGALEIGQRVEAY---ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN 298
L +L CAN L IG+ + A+ ++ ++ Y N+++ +Y KC A ++F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 299 EIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTT-PDDVTFVGLLLACTHGGMV 357
+ RN+ SW +M+ G G + L+L+ M G + P++ + +C++ G +
Sbjct: 94 LMPE-RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152
Query: 358 EKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
E+G+ F + +I +V + EA V+ +P SV L G
Sbjct: 153 EEGKQ-FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 158/503 (31%), Positives = 249/503 (49%), Gaps = 50/503 (9%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLL----EIPNL----HYAQAVLHHSPNSTVFLYNK 75
+ Q+K H + G+ + I KLL +PNL HYA ++ F+Y+
Sbjct: 24 VKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDT 83
Query: 76 LLQ--AYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFI 133
+++ + F L + +P+ G+ +H +
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVV 143
Query: 134 KSG-FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGAL 192
K+G F D T +L +Y + L AR++FDE+P +V W+ +M G+ R G L
Sbjct: 144 KNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 203
Query: 193 ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANL 252
E+F+ M R I P+ ++ + L ACA +
Sbjct: 204 EVFKEMLVRG--------------------------------IEPDEFSVTTALTACAQV 231
Query: 253 GALEIGQRVEAYARKNGFFK-NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNS 311
GAL G+ + + +K + + +++V A+++MYAKCG I+ A VF ++ + RN+ SW +
Sbjct: 232 GALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL-TRRNVFSWAA 290
Query: 312 MIMGLAVHGKCGKALELYDQMLRE-GTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTD 370
+I G A +G KA D++ RE G PD V +G+L AC HGG +E+GR + ++M+
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
Query: 371 FNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEI 430
+ I PK EHY C+VDL+ RAG+L +A ++I+ MPMKP + +WG LL C H NVEL E+
Sbjct: 351 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 431 AAESLFTLEPRN----PGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEG 486
A ++L LE N V LSNIY S + K+R +++ I K+ G S LE
Sbjct: 411 AVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVD 470
Query: 487 GQLHKFIVEDRSHPKSNEIFALL 509
G + KF+ D SHP +I L+
Sbjct: 471 GIVTKFVSGDVSHPNLLQIHTLI 493
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 255/503 (50%), Gaps = 48/503 (9%)
Query: 6 TTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTG----IDQTKTLIEKLLEIPNLHYAQAV 61
+T K L N K + QIHG+ L+ G ++ +L++ + ++ A+ V
Sbjct: 111 STNLKACGLLNALEKGL------QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 164
Query: 62 LHHSPNSTVFLYNKLLQAYXXXX--XXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXX 119
+ ++ +N ++ + F + + + P+++
Sbjct: 165 FRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI-KERPDEFTLTSLLKACSST 223
Query: 120 XXXXXGQMLHAHFIKSGF-APDVFAAT-ALLDMYAKVGTLELARRLFDEMPVREVPTWNA 177
G+ +H ++SGF P T +L+D+Y K G L AR+ FD++
Sbjct: 224 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK--------- 274
Query: 178 MMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
+ ++SW+++I GY++ ++ +A+GLF R++ E +
Sbjct: 275 ----------------------EKTMISWSSLILGYAQEGEFVEAMGLFKRLQ-ELNSQI 311
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
++ L+SI+ A+ L G++++A A K V N+V++MY KCG +D A + F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 298 NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMV 357
E+ L+++ SW +I G HG K++ ++ +MLR PD+V ++ +L AC+H GM+
Sbjct: 372 AEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMI 430
Query: 358 EKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
++G +F + I P++EHY C+VDLLGRAG+L+EA +I TMP+KP+ IW TLL
Sbjct: 431 KEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Query: 418 ACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKS 477
C HG++EL + + L ++ +NP NYV++SN+Y A W+ R++ + K
Sbjct: 491 LCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKE 550
Query: 478 AGHSFLEEGGQLHKFIVEDRSHP 500
AG S++E ++H F + SHP
Sbjct: 551 AGMSWVEIEREVHFFRSGEDSHP 573
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 146/299 (48%), Gaps = 45/299 (15%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +H + +KSG ++ + L+DMY K +A ++FD MP
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP---------------- 68
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
RNVVSW+ ++SG+ N + +L LF M + I PN T ++
Sbjct: 69 ---------------ERNVVSWSALMSGHVLNGDLKGSLSLFSEMG-RQGIYPNEFTFST 112
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
L AC L ALE G ++ + K GF + V N++++MY+KCG I+ A +VF I R
Sbjct: 113 NLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD-R 171
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTT---PDDVTFVGLLLACTHGGMVEKGR 361
+L SWN+MI G G KAL+ + M++E PD+ T LL AC+ GM+ G+
Sbjct: 172 SLISWNAMIAGFVHAGYGSKALDTFG-MMQEANIKERPDEFTLTSLLKACSSTGMIYAGK 230
Query: 362 HIFKSM-KTDFNIIPKLEHYGCMVDLLGRAGKL---REAYEVIQTMPMKPDSVIWGTLL 416
I + ++ F+ G +VDL + G L R+A++ I+ M + W +L+
Sbjct: 231 QIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM----ISWSSLI 285
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 181/420 (43%), Gaps = 45/420 (10%)
Query: 12 STLRNPNSKNIGMNQVKQIHGYTLRTG----IDQTKTLIEKLLEIPNLHYAQAVLHHSPN 67
S LR K + +Q Q+H Y L++G + + LI+ + A V P
Sbjct: 11 SILRVCTRKGLS-DQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 68 STVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQM 127
V ++ L+ + SL+S+M G PN++ G
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGS-LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
+H +K GF V +L+DMY+K G + A ++
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV------------------------ 164
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI--MPNAVTLASI 245
FR + R+++SW MI+G+ KAL F M+ E +I P+ TL S+
Sbjct: 165 -------FRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQ-EANIKERPDEFTLTSL 216
Query: 246 LPACANLGALEIGQRVEAYARKNGFF--KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
L AC++ G + G+++ + ++GF + ++ +++++Y KCG++ A + F++I
Sbjct: 217 LKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE- 275
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
+ + SW+S+I+G A G+ +A+ L+ ++ + D ++ ++ +G+ +
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 335
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+++ + +VD+ + G + EA + M +K D + W ++ HG
Sbjct: 336 -QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHG 393
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 235 IMPNA-VTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVA 293
++PN L SIL C G + G +V Y K+G NL SN +++MY KC +A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 294 WRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTH 353
++VF+ + RN+ SW++++ G ++G +L L+ +M R+G P++ TF L AC
Sbjct: 61 YKVFDSMPE-RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 354 GGMVEKGRHIFK-SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
+EKG I +K F ++ +E +VD+ + G++ EA +V + +
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMM--VEVGNSLVDMYSKCGRINEAEKVFRRI 168
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 155/503 (30%), Positives = 252/503 (50%), Gaps = 50/503 (9%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLL----EIPNL----HYAQAVLHHSPNSTVFLYNK 75
+ Q+K H + G+ + I KLL +PNL HYA ++ F+Y+
Sbjct: 24 VKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDT 83
Query: 76 LLQ--AYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFI 133
+++ + F L + +P+ G+ +H +
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVV 143
Query: 134 KSG-FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGAL 192
K+G F D T +L +Y + L AR++FDE+P +V W+ +M G+ R G L
Sbjct: 144 KNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 203
Query: 193 ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANL 252
E+FR M ++ G + P+ ++ + L ACA +
Sbjct: 204 EVFREM----------LVKG----------------------LEPDEFSVTTALTACAQV 231
Query: 253 GALEIGQRVEAYARKNGFFK-NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNS 311
GAL G+ + + +K + + +++V A+++MYAKCG I+ A VF ++ + RN+ SW +
Sbjct: 232 GALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-TRRNVFSWAA 290
Query: 312 MIMGLAVHGKCGKALELYDQMLRE-GTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTD 370
+I G A +G KA+ +++ RE G PD V +G+L AC HGG +E+GR + ++M+
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 350
Query: 371 FNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEI 430
+ I PK EHY C+VDL+ RAG+L +A +I+ MPMKP + +WG LL C H NVEL E+
Sbjct: 351 YEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 431 AAESLFTLEPRN----PGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEG 486
A ++L LE N V LSNIY S + +K+R +++ + K+ G S LE
Sbjct: 411 AVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVD 470
Query: 487 GQLHKFIVEDRSHPKSNEIFALL 509
G + KF+ D SHP +I ++
Sbjct: 471 GNVTKFVSGDVSHPNLLQIHTVI 493
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 251/498 (50%), Gaps = 45/498 (9%)
Query: 26 QVKQIHGYTLRTGIDQTKT-----LIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAY 80
+ ++ HG + G++ + L++ ++ A+ VL V L L+ Y
Sbjct: 183 EAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY 242
Query: 81 XXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPD 140
+ M + PN+Y G+++H +KSGF
Sbjct: 243 SQKGEDTEA-VKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 141 VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPS 200
+ + T+LL MY + VD +L +F+ +
Sbjct: 302 LASQTSLLTMYLRCSL-------------------------------VDDSLRVFKCIEY 330
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR 260
N VSWT++ISG +N + E AL F +M + I PN+ TL+S L C+NL E G++
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKM-MRDSIKPNSFTLSSALRGCSNLAMFEEGRQ 389
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
+ K GF ++ Y + ++++Y KCG D+A VF+ + + ++ S N+MI A +G
Sbjct: 390 IHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEV-DVISLNTMIYSYAQNG 448
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
+AL+L+++M+ G P+DVT + +LLAC + +VE+G +F S + D I+ +HY
Sbjct: 449 FGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHY 507
Query: 381 GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEP 440
CMVDLLGRAG+L EA E++ T + PD V+W TLL AC H VE+AE + +EP
Sbjct: 508 ACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEP 566
Query: 441 RNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDR-SH 499
+ G +++SN+YAS +W+ V +++ MK ++ K+ S++E + H F+ D SH
Sbjct: 567 GDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSH 626
Query: 500 PKSNEIFALLDGVYEMFK 517
P S +I L+ + E+ K
Sbjct: 627 PNSEQI---LENLEELIK 641
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 161/391 (41%), Gaps = 41/391 (10%)
Query: 6 TTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTG----IDQTKTLIEKLLEIPNLHYAQAV 61
TTT FS L ++ +K I + L++G I +K L++ L+ ++ YA+ V
Sbjct: 63 TTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSK-LVDASLKCGDIDYARQV 121
Query: 62 LHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXX 121
+ +N L+ AY +Y M P++Y
Sbjct: 122 FDGMSERHIVTWNSLI-AYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSL 180
Query: 122 XXXGQMLHAHFIKSGF-APDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMA 180
Q H + G +VF +AL+DMY K G A+ + D +
Sbjct: 181 EKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVE------------ 228
Query: 181 GHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAV 240
++VV T +I GYS+ + +A+ F M E+ + PN
Sbjct: 229 -------------------EKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK-VQPNEY 268
Query: 241 TLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI 300
T AS+L +C NL + G+ + K+GF L ++L MY +C +D + RVF I
Sbjct: 269 TYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCI 328
Query: 301 GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKG 360
N SW S+I GL +G+ AL + +M+R+ P+ T L C++ M E+G
Sbjct: 329 -EYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEG 387
Query: 361 RHIFKSMKTDFNIIPKLEHYGCMVDLLGRAG 391
R I + T + ++DL G+ G
Sbjct: 388 RQIH-GIVTKYGFDRDKYAGSGLIDLYGKCG 417
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 143/307 (46%), Gaps = 39/307 (12%)
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
+ + AH +KSGF P + + L+D K G ++ AR++FD M R + TWN+++A +
Sbjct: 85 KTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
A+E++RLM + NV +P+ TL+S+
Sbjct: 144 RRSKEAVEMYRLMITNNV--------------------------------LPDEYTLSSV 171
Query: 246 LPACANLGALEIGQRVEAYARKNGF-FKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
A ++L + QR A G N++V +A+++MY K G A V + + +
Sbjct: 172 FKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEE-K 230
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
++ ++I+G + G+ +A++ + ML E P++ T+ +L++C + + G+ I
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 365 KSM-KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
M K+ F L ++ + R + ++ V + + P+ V W +L+ +G
Sbjct: 291 GLMVKSGFE--SALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNG 347
Query: 424 NVELAEI 430
E+A I
Sbjct: 348 REEMALI 354
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 244/501 (48%), Gaps = 42/501 (8%)
Query: 19 SKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYN 74
S+ + + + K+IH ++ G + + + L+++ L A+ V P ++ +N
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 75 KLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIK 134
+++ Y C + ++M + G P+Q G+ +H + I+
Sbjct: 279 SMIKGYVAKGDSKS-CVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR 337
Query: 135 SGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALEL 194
S D++ +L+D+Y K G LA +F + +WN
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWN------------------ 379
Query: 195 FRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGA 254
MIS Y + KA+ ++ +M + P+ VT S+LPAC+ L A
Sbjct: 380 -------------VMISSYISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQLAA 425
Query: 255 LEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIM 314
LE G+++ ++ + + +A+L+MY+KCG+ A+R+FN I +++ SW MI
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK-KDVVSWTVMIS 484
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
HG+ +AL +D+M + G PD VT + +L AC H G++++G F M++ + I
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSV-IWGTLLGACSFHGNVELAEIAAE 433
P +EHY CM+D+LGRAG+L EAYE+IQ P D+ + TL AC H L + A
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 434 SLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFI 493
L P + Y++L N+YAS + WD ++R MK + K G S++E ++ F
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFF 664
Query: 494 VEDRSHPKSNEIF---ALLDG 511
EDRSH ++ ++ ALL G
Sbjct: 665 AEDRSHLRAENVYECLALLSG 685
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 196/451 (43%), Gaps = 77/451 (17%)
Query: 11 FSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHH-----S 65
S LR + + ++K +H L G+ + L + L+ + H
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS---PNQYXXXXXXXXXXXXXXX 122
S V+++N L+ Y +L RLL S P+ +
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHD---TLEVFKRLLNCSICVPDSFTFPNVIKAYGALGRE 123
Query: 123 XXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
G+M+H +KSG+ DV A++L+ MYAK E + ++FDEMP R+V +WN +++
Sbjct: 124 FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
+ G+ + ALELF M S SG+ PN+V+L
Sbjct: 184 YQSGEAEKALELFGRMES----------SGFE----------------------PNSVSL 211
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+ AC+ L LE G+ + K GF + YV++A+++MY KC ++VA VF ++
Sbjct: 212 TVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR 271
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
++L +WNSMI G G +E+ ++M+ EGT P T +L+AC+ + G+
Sbjct: 272 -KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKF 330
Query: 363 I-----------------------FKS-----MKTDFNIIPK--LEHYGCMVD---LLGR 389
I FK +T F+ K E + M+ +G
Sbjct: 331 IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGN 390
Query: 390 AGKLREAYEVIQTMPMKPDSVIWGTLLGACS 420
K E Y+ + ++ +KPD V + ++L ACS
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACS 421
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 204/339 (60%), Gaps = 3/339 (0%)
Query: 147 LLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSW 206
L+ Y ++LAR FD MP + +W M++G+ + GDV A ELFRLM ++ + +
Sbjct: 238 LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVY 297
Query: 207 TTMISGYSKNKQYEKALGLFLRM-ECEEDIMPNAVTLASILPACANLGALEIGQRVEAYA 265
MI+ Y++N + + AL LF +M E I P+ +TL+S++ A + LG G VE+Y
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 266 RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKA 325
++G + +S +++++Y K G A+++F+ + ++ S+++MIMG ++G +A
Sbjct: 358 TEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNK-KDTVSYSAMIMGCGINGMATEA 416
Query: 326 LELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVD 385
L+ M+ + P+ VTF GLL A +H G+V++G F SMK D N+ P +HYG MVD
Sbjct: 417 NSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVD 475
Query: 386 LLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGN 445
+LGRAG+L EAYE+I++MPM+P++ +WG LL A H NVE EIA LE G
Sbjct: 476 MLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGY 535
Query: 446 YVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
L+ IY+S +WD +R +K ++ K+ G S++E
Sbjct: 536 LSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 170/368 (46%), Gaps = 22/368 (5%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
+Y M G P+ + G+ +HA +K+G V+ T L+ +Y+
Sbjct: 91 VYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYS 150
Query: 153 KVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISG 212
++G +ELA++ FD++ + +WN+++ G+ G++D A +F +P ++ VSW +IS
Sbjct: 151 RLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISS 210
Query: 213 YSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR-VEAYARKNGFF 271
Y+K A LF M + + + ++ N +++ + +A +KNG
Sbjct: 211 YAKKGDMGNACSLFSAMP-----LKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVS 265
Query: 272 KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQ 331
+S Y K G + A +F + S ++ +++MI +GK AL+L+ Q
Sbjct: 266 WITMISG-----YTKLGDVQSAEELF-RLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQ 319
Query: 332 MLREGT--TPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGR 389
ML + PD++T ++ A + G G + +S T+ I ++DL +
Sbjct: 320 MLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV-ESYITEHGIKIDDLLSTSLIDLYMK 378
Query: 390 AGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFT--LEPRNPGNYV 447
G +A+++ + K D+V + ++ C +G A SLFT +E + P N V
Sbjct: 379 GGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGING----MATEANSLFTAMIEKKIPPNVV 433
Query: 448 ILSNIYAS 455
+ + ++
Sbjct: 434 TFTGLLSA 441
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 218/422 (51%), Gaps = 34/422 (8%)
Query: 60 AVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXX 119
+V H P +F +N ++ + R P+ +
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 120 XXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMM 179
G ++H +K GF+ +F ++AL+ MY +G L AR+LFD+MPVR+ + AM
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 180 AGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNA 239
G+ + G+ L +FR M GYS G L ++
Sbjct: 208 GGYVQQGEAMLGLAMFREM-------------GYS---------GFAL----------DS 235
Query: 240 VTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE 299
V + S+L AC LGAL+ G+ V + + L + NA+ +MY KC +D A VF
Sbjct: 236 VVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVN 295
Query: 300 IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEK 359
+ S R++ SW+S+I+G + G + +L+D+ML+EG P+ VTF+G+L AC HGG+VEK
Sbjct: 296 M-SRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEK 354
Query: 360 GRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGAC 419
F+ M+ ++NI+P+L+HY + D + RAG L EA + ++ MP+KPD + G +L C
Sbjct: 355 SWLYFRLMQ-EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGC 413
Query: 420 SFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAG 479
+GNVE+ E A L L+PR YV L+ +Y++A ++D LR+ MK QI+K G
Sbjct: 414 KVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPG 473
Query: 480 HS 481
S
Sbjct: 474 CS 475
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 3/238 (1%)
Query: 191 ALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACA 250
+L +F MP RN+ SW +I +S++ K++ LFLRM E + P+ TL IL AC+
Sbjct: 86 SLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACS 145
Query: 251 NLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWN 310
+ G + K GF +L+VS+A++ MY G + A ++F+++ +R+ +
Sbjct: 146 ASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM-PVRDSVLYT 204
Query: 311 SMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTD 370
+M G G+ L ++ +M G D V V LL+AC G ++ G+ +
Sbjct: 205 AMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRR 264
Query: 371 FNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+ + L + D+ + L A+ V M + D + W +L+ G+V ++
Sbjct: 265 CSCL-GLNLGNAITDMYVKCSILDYAHTVFVNMSRR-DVISWSSLILGYGLDGDVVMS 320
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 13/283 (4%)
Query: 30 IHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXX 85
IH L+ G + L+ +++ L +A+ + P LY + Y
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 215
Query: 86 XXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAAT 145
+++ +M G + + G+ +H I+ +
Sbjct: 216 AMLG-LAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGN 274
Query: 146 ALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR---- 201
A+ DMY K L+ A +F M R+V +W++++ G+ GDV + +LF M
Sbjct: 275 AITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEP 334
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
N V++ ++S + EK+ L+ R+ E +I+P AS+ + G LE
Sbjct: 335 NAVTFLGVLSACAHGGLVEKSW-LYFRLMQEYNIVPELKHYASVADCMSRAGLLE---EA 390
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
E + + V AVL G+++V RV E+ L+
Sbjct: 391 EKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLK 433
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 242/493 (49%), Gaps = 39/493 (7%)
Query: 30 IHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXX 85
+HG + +G+ + + L+ +I + ++ VL P V +N L+ Y
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 86 XXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXX-XXXXXXGQMLHAHFIKSGFAPDVFAA 144
+ + MR+ G S N G+ LHA+ + +GF D
Sbjct: 427 PDK-ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 485
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
+L+ MYAK G D+ + +LF + +RN++
Sbjct: 486 NSLITMYAKCG-------------------------------DLSSSQDLFNGLDNRNII 514
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
+W M++ + + E+ L L +M + + + + L A A L LE GQ++
Sbjct: 515 TWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 573
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
A K GF + ++ NA +MY+KCG I ++ + R+L SWN +I L HG +
Sbjct: 574 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN-RSLPSWNILISALGRHGYFEE 632
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMV 384
+ +ML G P VTFV LL AC+HGG+V+KG + + DF + P +EH C++
Sbjct: 633 VCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 692
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPG 444
DLLGR+G+L EA I MPMKP+ ++W +LL +C HGN++ AAE+L LEP +
Sbjct: 693 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS 752
Query: 445 NYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNE 504
YV+ SN++A+ +W+ V +RK M I K S+++ ++ F + DR+HP++ E
Sbjct: 753 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 812
Query: 505 IFALLDGVYEMFK 517
I+A L+ + ++ K
Sbjct: 813 IYAKLEDIKKLIK 825
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 159/394 (40%), Gaps = 40/394 (10%)
Query: 29 QIHGYTLRTGIDQTKTLIEKLLEIPNLH----YAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
Q+HG+ ++G+ + +L + ++ ++ V P+ V + L+ Y
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 85 XXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAA 144
+Y MR G N+ G+ + +KSG +
Sbjct: 123 EPEE-VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
+L+ M +G ++ A +FD+ M R+ +
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQ-------------------------------MSERDTI 210
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
SW ++ + Y++N E++ +F M D + N+ T++++L ++ + G+ +
Sbjct: 211 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGL 269
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
K GF + V N +L MYA G A VF ++ + ++L SWNS++ G+
Sbjct: 270 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLMASFVNDGRSLD 328
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMV 384
AL L M+ G + + VTF L AC EKGR I + + +V
Sbjct: 329 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALV 387
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
+ G+ G++ E+ V+ MP + D V W L+G
Sbjct: 388 SMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 420
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 119/230 (51%), Gaps = 5/230 (2%)
Query: 198 MPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL-E 256
MP RN VSW TM+SG + Y + + F +M C+ I P++ +AS++ AC G++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACGRSGSMFR 59
Query: 257 IGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGL 316
G +V + K+G ++YVS A+L +Y G + + +VF E+ RN+ SW S+++G
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD-RNVVSWTSLMVGY 118
Query: 317 AVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPK 376
+ G+ + +++Y M EG ++ + ++ +C GR I + + K
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV-VKSGLESK 177
Query: 377 LEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE 426
L ++ +LG G + A + M + D++ W ++ A + +G++E
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIE 226
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 45/299 (15%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +H KSG DV+ +TA+L +Y G + +R++F+EMP R V +W ++M G++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G+ + +++++ M V C E+ +++
Sbjct: 121 KGEPEEVIDIYKGMRGEGV--------------------------GCNEN------SMSL 148
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ +C L +G+++ K+G L V N+++ M G++D A +F+++ S R
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM-SER 207
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ SWNS+ A +G ++ ++ M R + T LL H + GR I
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 267
Query: 365 K-SMKTDFNIIPKLEHYGCMVDLLGR----AGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
+K F+ + C+ + L R AG+ EA V + MP K D + W +L+ +
Sbjct: 268 GLVVKMGFDSVV------CVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 319
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 242/493 (49%), Gaps = 39/493 (7%)
Query: 30 IHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXX 85
+HG + +G+ + + L+ +I + ++ VL P V +N L+ Y
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 86 XXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXX-XXXXXXGQMLHAHFIKSGFAPDVFAA 144
+ + MR+ G S N G+ LHA+ + +GF D
Sbjct: 444 PDK-ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 502
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
+L+ MYAK G D+ + +LF + +RN++
Sbjct: 503 NSLITMYAKCG-------------------------------DLSSSQDLFNGLDNRNII 531
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
+W M++ + + E+ L L +M + + + + L A A L LE GQ++
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 590
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
A K GF + ++ NA +MY+KCG I ++ + R+L SWN +I L HG +
Sbjct: 591 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN-RSLPSWNILISALGRHGYFEE 649
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMV 384
+ +ML G P VTFV LL AC+HGG+V+KG + + DF + P +EH C++
Sbjct: 650 VCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 709
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPG 444
DLLGR+G+L EA I MPMKP+ ++W +LL +C HGN++ AAE+L LEP +
Sbjct: 710 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS 769
Query: 445 NYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNE 504
YV+ SN++A+ +W+ V +RK M I K S+++ ++ F + DR+HP++ E
Sbjct: 770 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 829
Query: 505 IFALLDGVYEMFK 517
I+A L+ + ++ K
Sbjct: 830 IYAKLEDIKKLIK 842
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 128/246 (52%), Gaps = 5/246 (2%)
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+ +FG V A LF +MP RN VSW TM+SG + Y + + F +M C+ I P++
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFV 60
Query: 242 LASILPACANLGAL-EIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI 300
+AS++ AC G++ G +V + K+G ++YVS A+L +Y G + + +VF E+
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 301 GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKG 360
RN+ SW S+++G + G+ + +++Y M EG ++ + ++ +C G
Sbjct: 121 PD-RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 361 RHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACS 420
R I + + KL ++ +LG G + A + M + D++ W ++ A +
Sbjct: 180 RQIIGQV-VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYA 237
Query: 421 FHGNVE 426
+G++E
Sbjct: 238 QNGHIE 243
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 159/394 (40%), Gaps = 40/394 (10%)
Query: 29 QIHGYTLRTGIDQTKTLIEKLLEIPNLH----YAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
Q+HG+ ++G+ + +L + ++ ++ V P+ V + L+ Y
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 139
Query: 85 XXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAA 144
+Y MR G N+ G+ + +KSG +
Sbjct: 140 EPEE-VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 198
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
+L+ M +G ++ A +FD+ M R+ +
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQ-------------------------------MSERDTI 227
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
SW ++ + Y++N E++ +F M D + N+ T++++L ++ + G+ +
Sbjct: 228 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGL 286
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
K GF + V N +L MYA G A VF ++ + ++L SWNS++ G+
Sbjct: 287 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLMASFVNDGRSLD 345
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMV 384
AL L M+ G + + VTF L AC EKGR I + + +V
Sbjct: 346 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALV 404
Query: 385 DLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
+ G+ G++ E+ V+ MP + D V W L+G
Sbjct: 405 SMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 437
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 45/299 (15%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +H KSG DV+ +TA+L +Y G + +R++F+EMP R V +W ++M G++
Sbjct: 78 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G+ + +++++ M V C E+ +++
Sbjct: 138 KGEPEEVIDIYKGMRGEGV--------------------------GCNEN------SMSL 165
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ +C L +G+++ K+G L V N+++ M G++D A +F+++ S R
Sbjct: 166 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM-SER 224
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ SWNS+ A +G ++ ++ M R + T LL H + GR I
Sbjct: 225 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 284
Query: 365 K-SMKTDFNIIPKLEHYGCMVDLLGR----AGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
+K F+ + C+ + L R AG+ EA V + MP K D + W +L+ +
Sbjct: 285 GLVVKMGFDSVV------CVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 151/558 (27%), Positives = 249/558 (44%), Gaps = 77/558 (13%)
Query: 26 QVKQIHGYTLRTG-----IDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAY 80
+ QIH + + TG ++ LI I + YA+ V P V +YN ++ Y
Sbjct: 32 HITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVY 91
Query: 81 XXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPD 140
LY QM P+ G+ + + G+ D
Sbjct: 92 SRGKNPDEV-LRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND 150
Query: 141 VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPS 200
VF +++L++Y K G ++ A LF +M R+V W M+ G A+ G A+E +R M +
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 201 R---------------------------------------NVVSWTTMISGYSKNKQYEK 221
NVV T+++ Y+K E
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 222 ALGLFLRMECEEDI------------------------------MPNAVTLASILPACAN 251
A +F RM + + P+ VTL +L AC+
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQ 330
Query: 252 LGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNS 311
+G+L+ G+ V Y K + + A+++MY+KCG + + +F +G ++L WN+
Sbjct: 331 VGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVGR-KDLVCWNT 388
Query: 312 MIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDF 371
MI +HG + + L+ +M PD TF LL A +H G+VE+G+H F M +
Sbjct: 389 MISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKY 448
Query: 372 NIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIA 431
I P +HY C++DLL RAG++ EA ++I + + IW LL C H N+ + +IA
Sbjct: 449 KIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIA 508
Query: 432 AESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHK 491
A + L P + G ++SN +A+A++W VAK+RK+M+ + K G+S +E G+L
Sbjct: 509 ANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRT 568
Query: 492 FIVEDRSHPKSNEIFALL 509
F++ED SH + + +L
Sbjct: 569 FLMEDLSHHEHYHMLQVL 586
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 238/489 (48%), Gaps = 41/489 (8%)
Query: 30 IHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKL----LQAYX 81
IH YT + G++ + LL++ +L A + P+ V YN + LQ
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 82 XXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV 141
F L+ M+ G P+ G+ +HA K+ F D
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE 393
Query: 142 FAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
F +AL+++YA +G+ E DG ++ F +
Sbjct: 394 FIGSALIELYALMGSTE------------------------------DG-MQCFASTSKQ 422
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
++ SWT+MI + +N+Q E A LF R I P T++ ++ ACA+ AL G+++
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLF-RQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
+ YA K+G V + + MYAK G++ +A +VF E+ + ++ ++++MI LA HG
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQN-PDVATYSAMISSLAQHGS 540
Query: 322 CGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYG 381
+AL +++ M G P+ F+G+L+AC HGG+V +G F+ MK D+ I P +H+
Sbjct: 541 ANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFT 600
Query: 382 CMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPR 441
C+VDLLGR G+L +A +I + + V W LL +C + + + + AE L LEP
Sbjct: 601 CLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPE 660
Query: 442 NPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPK 501
G+YV+L NIY + ++R++M+ + K S++ G Q H F V D SHP
Sbjct: 661 ASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPS 720
Query: 502 SNEIFALLD 510
S I+ +L+
Sbjct: 721 SQMIYTMLE 729
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 147/316 (46%), Gaps = 49/316 (15%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G++ H H IKS P ++ LL+MY K L AR+LFD MP R + ++N++++G+ +
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G YE+A+ LFL E ++ + T A
Sbjct: 126 MG-------------------------------FYEQAMELFLEAR-EANLKLDKFTYAG 153
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
L C L++G+ + NG + +++ N +++MY+KCG +D A +F+ R
Sbjct: 154 ALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE-R 212
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT---HGGMVEKGR 361
+ SWNS+I G G + L L +M R+G +L AC + G +EKG
Sbjct: 213 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGM 272
Query: 362 HIF---KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
I + +F+I+ + ++D+ + G L+EA ++ MP K + V + ++
Sbjct: 273 AIHCYTAKLGMEFDIVVRT----ALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMIS- 326
Query: 419 CSFHGNVELAEIAAES 434
G +++ EI E+
Sbjct: 327 ----GFLQMDEITDEA 338
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 149/343 (43%), Gaps = 48/343 (13%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G++LH + +G + VF L+DMY+K G L+ A LFD R+ +WN++++G+ R
Sbjct: 167 GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G + L L M R+ ++ TT L S
Sbjct: 227 VGAAEEPLNLLAKM-HRDGLNLTT-------------------------------YALGS 254
Query: 245 ILPACA---NLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
+L AC N G +E G + Y K G ++ V A+L+MYAK G + A ++F+ +
Sbjct: 255 VLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP 314
Query: 302 SLRNLCSWNSMIMGL-----AVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGM 356
S +N+ ++N+MI G +A +L+ M R G P TF +L AC+
Sbjct: 315 S-KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKT 373
Query: 357 VEKGRHIFKSM-KTDFNIIPKLEHYG-CMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGT 414
+E GR I + K +F E G +++L G + + + K D W +
Sbjct: 374 LEYGRQIHALICKNNFQ---SDEFIGSALIELYALMGSTEDGMQCFASTS-KQDIASWTS 429
Query: 415 LLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASAD 457
++ + +E A LF+ R P Y + + A AD
Sbjct: 430 MIDCHVQNEQLESAFDLFRQLFSSHIR-PEEYTVSLMMSACAD 471
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 189/348 (54%), Gaps = 36/348 (10%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G LH + IKSG L+ MY+K
Sbjct: 366 GMSLHGYAIKSGLCTKTLVVNGLITMYSK------------------------------- 394
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
F DV+ L LF + ++SW ++ISG ++ + A +F +M ++P+A+T+AS
Sbjct: 395 FDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIAS 454
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L C+ L L +G+ + Y +N F +V A+++MYAKCG+ A VF S++
Sbjct: 455 LLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFK---SIK 511
Query: 305 NLCS--WNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
C+ WNSMI G ++ G +AL Y +M +G PD++TF+G+L AC HGG V++G+
Sbjct: 512 APCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKI 571
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
F++M +F I P L+HY MV LLGRA EA +I M +KPDS +WG LL AC H
Sbjct: 572 CFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIH 631
Query: 423 GNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMK 470
+E+ E A +F L+ +N G YV++SN+YA+ WD V ++R +MK
Sbjct: 632 RELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMK 679
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 183/469 (39%), Gaps = 78/469 (16%)
Query: 26 QVKQIHGYTLRTGIDQ----TKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYX 81
QV+Q+ + ++G+D+ +L+ L+ + AQ + P ++N L+ Y
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 82 XXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV 141
+ L+ M G SP+ G+ +H KSG D
Sbjct: 128 RNGYECDA-WKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 142 FAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
AL+ Y+K L A LF EM + +WN M+ +++ G + A+ +F+ M +
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 202 NV-VSWTTMISGYSKNKQYEKALGLFLRMECEEDI------------------------- 235
NV +S T+I+ S + +E L ++ DI
Sbjct: 247 NVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYAS 306
Query: 236 --MPNAVTLASILPACANLGALEI-----------------------------------G 258
+ V L SI+ A G ++I G
Sbjct: 307 AKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIG 366
Query: 259 QRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAV 318
+ YA K+G V N ++ MY+K ++ +F ++ L SWNS+I G
Sbjct: 367 MSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE-TPLISWNSVISGCVQ 425
Query: 319 HGKCGKALELYDQ-MLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK-SMKTDFNIIPK 376
G+ A E++ Q ML G PD +T LL C+ + G+ + +++ +F +
Sbjct: 426 SGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF----E 481
Query: 377 LEHYGC--MVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
E++ C ++D+ + G +A V +++ P + W +++ S G
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISGYSLSG 529
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 232 EEDIMPNAVTLASILPACA---NLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCG 288
+ PN T++ L A N L++ Q V+ + K+G + +YV ++L +Y K G
Sbjct: 41 RSSLTPNHFTMSIFLQATTTSFNSFKLQVEQ-VQTHLTKSGLDRFVYVKTSLLNLYLKKG 99
Query: 289 HIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLL 348
+ A +F+E+ R+ WN++I G + +G A +L+ ML++G +P T V LL
Sbjct: 100 CVTSAQMLFDEMPE-RDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLL 158
Query: 349 LACTHGGMVEKGRHIFK-SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKP 407
C G V +GR + + K+ + ++++ ++ + +L A + + M K
Sbjct: 159 PFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN--ALISFYSKCAELGSAEVLFREMKDK- 215
Query: 408 DSVIWGTLLGACSFHGNVELAEIAAESLF 436
+V W T++GA S G E A +++F
Sbjct: 216 STVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 100/248 (40%), Gaps = 50/248 (20%)
Query: 21 NIGMNQVKQIHGYTLRTGIDQTKTLI--------EKLLEIPNLHYAQAVLHHSPNSTVFL 72
+IGM+ +HGY +++G+ TKTL+ K ++ + + L +P +
Sbjct: 364 DIGMS----LHGYAIKSGL-CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP---LIS 415
Query: 73 YNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS-PNQYXXXXXXXXXXXXXXXXXGQMLHAH 131
+N ++ F ++ QM L G P+ G+ LH +
Sbjct: 416 WNSVISGCVQSGRASTA-FEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGY 474
Query: 132 FIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGA 191
+++ F + F TAL+DMYAK G A +F + TWN
Sbjct: 475 TLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWN--------------- 519
Query: 192 LELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACAN 251
+MISGYS + +AL +L M E+ + P+ +T +L AC +
Sbjct: 520 ----------------SMISGYSLSGLQHRALSCYLEMR-EKGLKPDEITFLGVLSACNH 562
Query: 252 LGALEIGQ 259
G ++ G+
Sbjct: 563 GGFVDEGK 570
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 242/487 (49%), Gaps = 42/487 (8%)
Query: 28 KQIHGYTLRTGIDQ-----TKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
K +HG+ +R +D + L+E E L + VL + + +N L+ Y
Sbjct: 323 KSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAH 382
Query: 83 XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVF 142
L+ QM P+ + G+ +H H I++ + D F
Sbjct: 383 RGMVIQA-LGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEF 440
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRN 202
+L+DMY+K G+ VD A +F + R+
Sbjct: 441 VQNSLIDMYSKSGS-------------------------------VDSASTVFNQIKHRS 469
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
VV+W +M+ G+S+N +A+ LF M + N VT +++ AC+++G+LE G+ V
Sbjct: 470 VVTWNSMLCGFSQNGNSVEAISLFDYMY-HSYLEMNEVTFLAVIQACSSIGSLEKGKWVH 528
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC 322
+G K+L+ A+++MYAKCG ++ A VF + S + SW+SMI +HG+
Sbjct: 529 HKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV-SWSSMINAYGMHGRI 586
Query: 323 GKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGC 382
G A+ ++QM+ GT P++V F+ +L AC H G VE+G++ F MK+ F + P EH+ C
Sbjct: 587 GSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFAC 645
Query: 383 MVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRN 442
+DLL R+G L+EAY I+ MP D+ +WG+L+ C H +++ + L + +
Sbjct: 646 FIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDD 705
Query: 443 PGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKS 502
G Y +LSNIYA +W+ +LR MK S + K G+S +E ++ +F + + ++
Sbjct: 706 TGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQT 765
Query: 503 NEIFALL 509
+EI+ L
Sbjct: 766 DEIYRFL 772
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 162/364 (44%), Gaps = 45/364 (12%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +H IK G D T+LL MY + G L A ++FD MPVR++ W+ +++
Sbjct: 120 GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G+V AL +F+ M ++ + P+AVT+ S
Sbjct: 180 NGEVVKALRMFKCM--------------------------------VDDGVEPDAVTMIS 207
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ CA LG L I + V + F + + N++L MY+KCG + + R+F +I +
Sbjct: 208 VVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAK-K 266
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
N SW +MI KAL + +M++ G P+ VT +L +C G++ +G+ +
Sbjct: 267 NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSV- 325
Query: 365 KSMKTDFNIIPKLEHYG-CMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ P E +V+L GKL + V++ + + + V W +L+ + G
Sbjct: 326 HGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR-NIVAWNSLISLYAHRG 384
Query: 424 NVELAEIAAESLF---TLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGH 480
V I A LF + P + + S+I SA + G+ L K + G I
Sbjct: 385 MV----IQALGLFRQMVTQRIKPDAFTLASSI--SACENAGLVPLGKQIHGHVIRTDVSD 438
Query: 481 SFLE 484
F++
Sbjct: 439 EFVQ 442
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 156/310 (50%), Gaps = 16/310 (5%)
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDV 188
+ G PD ++++ A++G L +AR + ++ + + N+++ +++ GD+
Sbjct: 194 VDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDL 253
Query: 189 DGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA 248
+ +F + +N VSWT MIS Y++ + EKAL F M + I PN VTL S+L +
Sbjct: 254 LSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM-IKSGIEPNLVTLYSVLSS 312
Query: 249 CANLGALEIGQRVEAYARKNGFFKNL-YVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLC 307
C +G + G+ V +A + N +S A++E+YA+CG + V + S RN+
Sbjct: 313 CGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVV-SDRNIV 371
Query: 308 SWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF-KS 366
+WNS+I A G +AL L+ QM+ + PD T + AC + G+V G+ I
Sbjct: 372 AWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHV 431
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE 426
++TD + ++D+ ++G + A V + + V W ++L S +GN
Sbjct: 432 IRTD---VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRS-VVTWNSMLCGFSQNGN-- 485
Query: 427 LAEIAAESLF 436
+ A SLF
Sbjct: 486 --SVEAISLF 493
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 149/332 (44%), Gaps = 47/332 (14%)
Query: 128 LHAHFIKSG-FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG 186
LHAH + +G D T L++ YA +G+ + +R +F+ P + + ++ +
Sbjct: 20 LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCH 79
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
+D A++L+ +VS TT IS + + P S+L
Sbjct: 80 LLDAAIDLYH-----RLVSETTQISKF---------------------VFP------SVL 107
Query: 247 PACA-NLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
ACA + L +G +V K G + + ++L MY + G++ A +VF+ + +R+
Sbjct: 108 RACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM-PVRD 166
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK 365
L +W++++ +G+ KAL ++ M+ +G PD VT + ++ C G + R +
Sbjct: 167 LVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHG 226
Query: 366 SM-KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+ + F++ L ++ + + G L + + + + K ++V W ++ S +
Sbjct: 227 QITRKMFDLDETL--CNSLLTMYSKCGDLLSSERIFEKIA-KKNAVSWTAMI---SSYNR 280
Query: 425 VELAEIAAESLFT-----LEPRNPGNYVILSN 451
E +E A S +EP Y +LS+
Sbjct: 281 GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 215/436 (49%), Gaps = 32/436 (7%)
Query: 54 NLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXX 113
++ + + P +V +N +L Y S + QM+ P++
Sbjct: 365 DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA-ISNFRQMQFQNLKPDKTTLSVIL 423
Query: 114 XXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP 173
G+ +H I++ + + + L+ +Y++ +E++ +FD+
Sbjct: 424 SSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDD------- 476
Query: 174 TWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEE 233
+ ++ W +MISG+ N KAL LF RM
Sbjct: 477 -----------------------CINELDIACWNSMISGFRHNMLDTKALILFRRMHQTA 513
Query: 234 DIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVA 293
+ PN + A++L +C+ L +L G++ K+G+ + +V A+ +MY KCG ID A
Sbjct: 514 VLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSA 573
Query: 294 WRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTH 353
+ F+ + +N WN MI G +G+ +A+ LY +M+ G PD +TFV +L AC+H
Sbjct: 574 RQFFDAVLR-KNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSH 632
Query: 354 GGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWG 413
G+VE G I SM+ I P+L+HY C+VD LGRAG+L +A ++ + P K SV+W
Sbjct: 633 SGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWE 692
Query: 414 TLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQ 473
LL +C HG+V LA AE L L+P++ YV+LSN Y+S QWD A L+ +M ++
Sbjct: 693 ILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNR 752
Query: 474 ITKSAGHSFLEEGGQL 489
+ K+ G S+ G L
Sbjct: 753 VHKTPGQSWTTYGNDL 768
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 128/225 (56%), Gaps = 3/225 (1%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+++H ++ G D + LLD+Y + G + AR++FDEM VR+V +WNA + +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
GD+ A E+F MP R+VVSW MIS + EKAL ++ RM C + +P+ TLAS
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC-DGFLPSRFTLAS 143
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHI-DVAWRVFNEIGSL 303
+L AC+ + G R A K G KN++V NA+L MYAKCG I D RVF + S
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL-SQ 202
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLL 348
N S+ ++I GLA K +A++++ M +G D V +L
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 195/487 (40%), Gaps = 94/487 (19%)
Query: 4 SGTTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQ 59
SG + S LR + ++ K IHG+ +R G+ L +LL E + YA+
Sbjct: 3 SGGNKYLASLLRCYRDERCKLSG-KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYAR 61
Query: 60 AVLHHSPNSTVFLYNKLLQAYXXXXXXXXXC----------------------------- 90
V V+ +N L C
Sbjct: 62 KVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEK 121
Query: 91 -FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLD 149
+Y +M G P+++ G H +K+G ++F ALL
Sbjct: 122 ALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLS 181
Query: 150 MYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTM 209
MYAK G + VD + +F + N VS+T +
Sbjct: 182 MYAKCGFI------------------------------VDYGVRVFESLSQPNEVSYTAV 211
Query: 210 ISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP------ACANLGAL---EIGQR 260
I G ++ + +A+ +F R+ CE+ + ++V L++IL C +L + E+G++
Sbjct: 212 IGGLARENKVLEAVQMF-RLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQ 270
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
+ A + GF +L+++N++LE+YAK ++ A +F E+ + N+ SWN MI+G
Sbjct: 271 IHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEV-NVVSWNIMIVGFGQEY 329
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
+ K++E +M G P++VT + +L AC G VE GR IF S+ P + +
Sbjct: 330 RSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAW 384
Query: 381 GCMVDLLGRAGKLREA---YEVIQTMPMKPDSVIWGTLLGACS----------FHGNVEL 427
M+ EA + +Q +KPD +L +C+ HG V
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Query: 428 AEIAAES 434
EI+ S
Sbjct: 445 TEISKNS 451
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 204/476 (42%), Gaps = 90/476 (18%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA- 183
G+ +H ++ GF D+ +LL++YAK + A +F EMP V +WN M+ G
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 184 ----------------------------------RFGDVDGALELFRLMPSRNVVSWTTM 209
R GDV+ +F +P +V +W M
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAM 387
Query: 210 ISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNG 269
+SGYS + YE+A+ F +M+ + ++ P+ TL+ IL +CA L LE G+++ +
Sbjct: 388 LSGYSNYEHYEEAISNFRQMQFQ-NLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTE 446
Query: 270 FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELY 329
KN ++ + ++ +Y++C ++++ +F++ + ++ WNSMI G + KAL L+
Sbjct: 447 ISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILF 506
Query: 330 DQMLREGT-TPDDVTFVGLLLACT------HG---------------------------- 354
+M + P++ +F +L +C+ HG
Sbjct: 507 RRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCK 566
Query: 355 -GMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREA---YEVIQTMPMKPDSV 410
G ++ R F ++ +I + M+ G G+ EA Y + + KPD +
Sbjct: 567 CGEIDSARQFFDAVLRKNTVI-----WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGI 621
Query: 411 IWGTLLGACSFHGNVELA-EI--AAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRK 467
+ ++L ACS G VE EI + + + +EP +Y+ + + A + + KL +
Sbjct: 622 TFVSVLTACSHSGLVETGLEILSSMQRIHGIEP-ELDHYICIVDCLGRAGRLEDAEKLAE 680
Query: 468 VM--KGSQITKSAGHSFLEEGGQ--LHKFIVED--RSHPKSNEIFALLDGVYEMFK 517
K S + S G L + + E R P+S+ + LL Y +
Sbjct: 681 ATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLR 736
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 119/313 (38%), Gaps = 38/313 (12%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSPNS-TVFLYNKLLQAYXX 82
KQIHG +RT I + ++ L+ E + ++ + N + +N ++ +
Sbjct: 436 KQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRH 495
Query: 83 XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVF 142
+ PN+ G+ H +KSG+ D F
Sbjct: 496 NMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSF 555
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRN 202
TAL DMY K G ++ AR+ FD + + WN M+ G+ G D A+ L+R
Sbjct: 556 VETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYR------ 609
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV- 261
MIS K P+ +T S+L AC++ G +E G +
Sbjct: 610 -----KMISSGEK---------------------PDGITFVSVLTACSHSGLVETGLEIL 643
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
+ R +G L +++ + G ++ A ++ + W ++ VHG
Sbjct: 644 SSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGD 703
Query: 322 CGKALELYDQMLR 334
A + ++++R
Sbjct: 704 VSLARRVAEKLMR 716
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 201/375 (53%), Gaps = 48/375 (12%)
Query: 125 GQMLHAHFIKSGFAPDV-FAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA 183
G+++H K GF + T LL YAK G L AR++FDE
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDE----------------- 172
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQY-----EKALGLFLRMEC-EEDIMP 237
MP R V+W MI GY +K KA+ LF R C + P
Sbjct: 173 --------------MPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRP 218
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFK--NLYVSNAVLEMYAKCGHIDVAWR 295
T+ +L A + G LEIG V Y K GF ++++ A+++MY+KCG ++ A+
Sbjct: 219 TDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFS 278
Query: 296 VFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
VF E+ ++N+ +W SM GLA++G+ + L ++M G P+++TF LL A H G
Sbjct: 279 VF-ELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIG 337
Query: 356 MVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTL 415
+VE+G +FKSMKT F + P +EHYGC+VDLLG+AG+++EAY+ I MP+KPD+++ +L
Sbjct: 338 LVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSL 397
Query: 416 LGACSFHGNVELAEIAAESLFTLEPRNPG-------NYVILSNIYASADQWDGVAKLRKV 468
ACS +G + E ++L +E + +YV LSN+ A +W V KLRK
Sbjct: 398 CNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKE 457
Query: 469 MKGSQITKSAGHSFL 483
MK +I G+SF+
Sbjct: 458 MKERRIKTRPGYSFV 472
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 255 LEIGQRVEAYARKNGF-FKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
L +G+ V +K GF +++ + +L YAK G + A +VF+E+ R +WN+MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPE-RTSVTWNAMI 185
Query: 314 MGLAVHGKCG-----KALELYDQM--LREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
G H G KA+ L+ + G P D T V +L A + G++E G +
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 367 MKTDFNIIPKLEHY--GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
++ P+++ + +VD+ + G L A+ V + M +K + W ++ + +G
Sbjct: 246 IE-KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATGLALNG 302
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 195/317 (61%), Gaps = 4/317 (1%)
Query: 169 VREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLR 228
+ ++ N +++ +A++G + A F + ++V+S+ ++I+G N + E++ LF
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 229 MECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCG 288
M I P+ TL +L AC++L AL G Y +G+ N + NA+++MY KCG
Sbjct: 400 MR-TSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 289 HIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLL 348
+DVA RVF+ + R++ SWN+M+ G +HG +AL L++ M G PD+VT + +L
Sbjct: 459 KLDVAKRVFDTMHK-RDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAIL 517
Query: 349 LACTHGGMVEKGRHIFKSM-KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKP 407
AC+H G+V++G+ +F SM + DFN+IP+++HY CM DLL RAG L EAY+ + MP +P
Sbjct: 518 SACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEP 577
Query: 408 DSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRK 467
D + GTLL AC + N EL ++ + +L + V+LSN Y++A++W+ A++R
Sbjct: 578 DIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTE-SLVLLSNTYSAAERWEDAARIRM 636
Query: 468 VMKGSQITKSAGHSFLE 484
+ K + K+ G+S+++
Sbjct: 637 IQKKRGLLKTPGYSWVD 653
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 183/415 (44%), Gaps = 56/415 (13%)
Query: 19 SKNIGMNQVKQIHGYTLRTGID-QTKTLIEKLLEI----PNLHYAQAVLHHSPNSTV--F 71
S+N+ + QV IH + L+ + + T++ L + + A+ V P+ +
Sbjct: 12 SRNLVLGQV--IHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPI 69
Query: 72 LYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAH 131
++ +++AY LY +M G P +Y G+++H+H
Sbjct: 70 AWDLMIRAYASNDFAEKA-LDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH 128
Query: 132 FIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGA 191
S FA D++ TAL+D YAK G LE+A
Sbjct: 129 VNCSDFATDMYVCTALVDFYAKCGELEMA------------------------------- 157
Query: 192 LELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACAN 251
+++F MP R++V+W MISG+S + +GLFL M + + PN T+ + PA
Sbjct: 158 IKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGR 217
Query: 252 LGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNS 311
GAL G+ V Y + GF +L V +L++YAK I A RVF ++ +N +W++
Sbjct: 218 AGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF-DLDFKKNEVTWSA 276
Query: 312 MIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVG------LLLACTHGGMVEKGRHIF- 364
MI G + +A E++ QML D+V V +L+ C G + GR +
Sbjct: 277 MIGGYVENEMIKEAGEVFFQML----VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHC 332
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGAC 419
++K F I L ++ + G L +A+ + +K D + + +L+ C
Sbjct: 333 YAVKAGF--ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK-DVISYNSLITGC 384
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
F L+ +MR G P+ G H + + G+A + AL+DM
Sbjct: 394 FRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDM 453
Query: 151 YAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMI 210
Y K G L++A+R+FD M R++ +WN M+ G FG I
Sbjct: 454 YTKCGKLDVAKRVFDTMHKRDIVSWNTMLFG---FG-----------------------I 487
Query: 211 SGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGF 270
G K +AL LF M+ E + P+ VTL +IL AC++ G ++ G+++ + F
Sbjct: 488 HGLGK-----EALSLFNSMQ-ETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDF 541
Query: 271 --FKNLYVSNAVLEMYAKCGHIDVAWRVFNEI 300
+ N + ++ A+ G++D A+ N++
Sbjct: 542 NVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 221/428 (51%), Gaps = 38/428 (8%)
Query: 58 AQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXX 117
A+ V P V + +L A+ Y+ R G P+
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 118 XXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNA 177
G+ +H I +G +V ++LLDMY K G++ AR++F+ M
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS--------- 327
Query: 178 MMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
+N VSW+ ++ GY +N ++EKA+ +F ME E+D+
Sbjct: 328 ----------------------KKNSVSWSALLGGYCQNGEHEKAIEIFREME-EKDLY- 363
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
++L ACA L A+ +G+ + + G F N+ V +A++++Y K G ID A RV+
Sbjct: 364 ---CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY 420
Query: 298 NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMV 357
+++ S+RN+ +WN+M+ LA +G+ +A+ ++ M+++G PD ++F+ +L AC H GMV
Sbjct: 421 SKM-SIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMV 479
Query: 358 EKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
++GR+ F M + I P EHY CM+DLLGRAG EA +++ + D+ +WG LLG
Sbjct: 480 DEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLG 539
Query: 418 ACSFHGNV-ELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITK 476
C+ + + +AE A+ + LEP+ +YV+LSN+Y + + +RK+M + K
Sbjct: 540 PCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAK 599
Query: 477 SAGHSFLE 484
+ G S+++
Sbjct: 600 TVGQSWID 607
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 174/408 (42%), Gaps = 50/408 (12%)
Query: 29 QIHGYTLRTGIDQTKTLIEKLLEI-----PNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
Q H + +++G++ + + LL + P + + V + ++ Y
Sbjct: 82 QFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTG 141
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
++ +M G N++ G+ H I GF + F
Sbjct: 142 KEHVKA-LEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFI 200
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
++ L +Y ARR+FDEMP +V
Sbjct: 201 SSTLAYLYGVNREPVDARRVFDEMP-------------------------------EPDV 229
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
+ WT ++S +SKN YE+ALGLF M + ++P+ T ++L AC NL L+ G+ +
Sbjct: 230 ICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHG 289
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
NG N+ V +++L+MY KCG + A +VFN + S +N SW++++ G +G+
Sbjct: 290 KLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM-SKKNSVSWSALLGGYCQNGEHE 348
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI---FKSMKTDFNIIPKLEHY 380
KA+E++ RE D F +L AC V G+ I + N+I +
Sbjct: 349 KAIEIF----REMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE---- 400
Query: 381 GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
++DL G++G + A V M ++ + + W +L A + +G E A
Sbjct: 401 SALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEA 447
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 97/241 (40%), Gaps = 13/241 (5%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQA 79
+ Q K+IHG + GI + LL++ ++ A+ V + ++ LL
Sbjct: 281 LKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGG 340
Query: 80 YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
Y ++ +M + Y G+ +H +++ G
Sbjct: 341 YCQNGEHEKA-IEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 395
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
+V +AL+D+Y K G ++ A R++ +M +R + TWNAM++ A+ G + A+ F M
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 200 SRNV----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL 255
+ + +S+ +++ ++ F+ M I P + ++ G
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLF 515
Query: 256 E 256
E
Sbjct: 516 E 516
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 14/184 (7%)
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCG-HIDVAWRVFNEIG 301
AS+L C + + G + A+ K+G + V N++L +Y K G + RVF+
Sbjct: 65 ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG-R 123
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
+++ SW SM+ G + KALE++ +M+ G ++ T + AC+ G V GR
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 362 HIFKSMKT---DFNIIPKLEHY--GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
+ T ++N H+ + L G + +A V MP +PD + W +L
Sbjct: 184 CFHGVVITHGFEWN------HFISSTLAYLYGVNREPVDARRVFDEMP-EPDVICWTAVL 236
Query: 417 GACS 420
A S
Sbjct: 237 SAFS 240
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 209/418 (50%), Gaps = 6/418 (1%)
Query: 70 VFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLH 129
++ N + +AY Y + G P+ Y G+M H
Sbjct: 83 LYCANPVFKAYLVSSSPKQA-LGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCH 141
Query: 130 AHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVD 189
IK G + +L+ MY G L+LA++LF E+P R++ +WN+++AG R GDV
Sbjct: 142 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 201
Query: 190 GALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPAC 249
A +LF MP +N++SW MIS Y ++ LF M N TL +L AC
Sbjct: 202 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM-VRAGFQGNESTLVLLLNAC 260
Query: 250 ANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSW 309
L+ G+ V A + ++ + A+++MY KC + +A R+F+ + S+RN +W
Sbjct: 261 GRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSL-SIRNKVTW 319
Query: 310 NSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKT 369
N MI+ +HG+ LEL++ M+ PD+VTFVG+L C G+V +G+ + M
Sbjct: 320 NVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVD 379
Query: 370 DFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGACSFHGNVE 426
+F I P H CM +L AG EA E ++ +P + P+S W LL + F GN
Sbjct: 380 EFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPT 439
Query: 427 LAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
L E A+SL +P N Y +L NIY+ +W+ V ++R+++K +I + G ++
Sbjct: 440 LGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVD 497
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 198/352 (56%), Gaps = 4/352 (1%)
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
N+MM ++ G++ A LF+ M R+++SW+T+I GY + E+ F M +
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR-QSGT 407
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWR 295
P LAS+L N+ +E G++V A A G +N V ++++ MY+KCG I A
Sbjct: 408 KPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASM 467
Query: 296 VFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
+F E ++ S +MI G A HGK +A++L+++ L+ G PD VTF+ +L ACTH G
Sbjct: 468 IFGETDR-DDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526
Query: 356 MVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTL 415
++ G H F M+ +N+ P EHYGCMVDLL RAG+L +A ++I M K D V+W TL
Sbjct: 527 QLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTL 586
Query: 416 LGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQIT 475
L AC G++E AAE + L+P V L+NIY+S + A +RK MK +
Sbjct: 587 LIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVI 646
Query: 476 KSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFKFNRSAFECHL 527
K G S ++ + F+ DR HP+S +I+ +L+ + +R F+C L
Sbjct: 647 KEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVSGAEAHR--FDCTL 696
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 158/374 (42%), Gaps = 38/374 (10%)
Query: 46 IEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGH--S 103
+ L+ NL A+ V P+ + + +++ Y L+S MR++ H S
Sbjct: 47 LRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALI-LFSAMRVVDHAVS 105
Query: 104 PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRL 163
P+ G+ LHA+ +K+ V+ ++LLDMY +VG ++ + R+
Sbjct: 106 PDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRV 165
Query: 164 FDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKAL 223
F EMP R TW A++ G G +Y++ L
Sbjct: 166 FSEMPFRNAVTWTAIITGLVHAG-------------------------------RYKEGL 194
Query: 224 GLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEM 283
F M E+ + + T A L ACA L ++ G+ + + GF L V+N++ M
Sbjct: 195 TYFSEMSRSEE-LSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATM 253
Query: 284 YAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
Y +CG + +F + S R++ SW S+I+ G+ KA+E + +M P++ T
Sbjct: 254 YTECGEMQDGLCLFENM-SERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQT 312
Query: 344 FVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
F + AC + G + ++ + + L M+ + G L A + Q M
Sbjct: 313 FASMFSACASLSRLVWGEQLHCNVLS-LGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGM 371
Query: 404 PMKPDSVIWGTLLG 417
+ D + W T++G
Sbjct: 372 RCR-DIISWSTIIG 384
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 147/339 (43%), Gaps = 72/339 (21%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H H I GF + A +L MY + G ++
Sbjct: 228 GKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQ-------------------------- 261
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
DG L LF M R+VVSWT++I Y + Q KA+ F++M + PN T AS
Sbjct: 262 ----DG-LCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMR-NSQVPPNEQTFAS 315
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+ ACA+L L G+++ G +L VSN++++MY+ CG++ A +F + R
Sbjct: 316 MFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGM-RCR 374
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
++ SW+++I G G + + + M + GT P D LL + ++E GR +
Sbjct: 375 DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVH 434
Query: 365 ------------------------------KSM---KTDFNIIPKLEHYGCMVDLLGRAG 391
SM +TD + I L M++ G
Sbjct: 435 ALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLT---AMINGYAEHG 491
Query: 392 KLREAYEVIQ---TMPMKPDSVIWGTLLGACSFHGNVEL 427
K +EA ++ + + +PDSV + ++L AC+ G ++L
Sbjct: 492 KSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDL 530
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 14/314 (4%)
Query: 162 RLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEK 221
R+ +++ V+ P N+ + G++ A ++F MP ++VSWT++I Y ++
Sbjct: 32 RISNQVMVKFDP--NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDE 89
Query: 222 ALGLFLRMEC-EEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAV 280
AL LF M + + P+ L+ +L AC + G+ + AYA K ++YV +++
Sbjct: 90 ALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSL 149
Query: 281 LEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPD 340
L+MY + G ID + RVF+E+ RN +W ++I GL G+ + L + +M R D
Sbjct: 150 LDMYKRVGKIDKSCRVFSEM-PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSD 208
Query: 341 DVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVI 400
TF L AC V+ G+ I + + L + + G++++ +
Sbjct: 209 TYTFAIALKACAGLRQVKYGKAIHTHVIVR-GFVTTLCVANSLATMYTECGEMQDGLCLF 267
Query: 401 QTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWD 460
+ M + D V W +L+ A G E+ A F ++ RN + N A +
Sbjct: 268 ENMSER-DVVSWTSLIVAYKRIGQ----EVKAVETF-IKMRNSQ---VPPNEQTFASMFS 318
Query: 461 GVAKLRKVMKGSQI 474
A L +++ G Q+
Sbjct: 319 ACASLSRLVWGEQL 332
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 215/386 (55%), Gaps = 2/386 (0%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +HA +K+G + F ++ ++D+Y K G ++ A + + ++M+ G++
Sbjct: 279 GKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSS 338
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G + A LF + +N+V WT M GY +Q + L L E P+++ + S
Sbjct: 339 QGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVS 398
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L AC+ +E G+ + ++ + G + + A ++MY+KCG+++ A R+F+ R
Sbjct: 399 VLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS-SFER 457
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ +N+MI G A HG K+ + ++ M G PD++TF+ LL AC H G+V +G F
Sbjct: 458 DTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYF 517
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP-MKPDSVIWGTLLGACSFHG 423
KSM +NI P+ HY CM+DL G+A +L +A E+++ + ++ D+VI G L ACS++
Sbjct: 518 KSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNK 577
Query: 424 NVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
N EL + E L +E N Y+ ++N YAS+ +WD + ++R M+G ++ +G S+
Sbjct: 578 NTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWA 637
Query: 484 EEGGQLHKFIVEDRSHPKSNEIFALL 509
Q H F D SH ++ I+A+L
Sbjct: 638 NIDKQFHMFTSSDISHYETEAIYAML 663
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 208/466 (44%), Gaps = 49/466 (10%)
Query: 2 VLSGTTTFKFST--LRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQ 59
+ SG+T S+ L N SK+ + + + + L + +I ++ N+ A+
Sbjct: 15 IKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEAR 74
Query: 60 AVLHHSPN--STVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSP---NQYXXXXXXX 114
L S N + YN LL + ++ +M + +
Sbjct: 75 E-LFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVK 133
Query: 115 XXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPT 174
G+ LH +K+G FA ++L+ MY+K G + +F+ V V +
Sbjct: 134 LSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDS 193
Query: 175 --WNAMMAGHARFGDVDGALELFRLMPSRN-VVSWTTMISGYSKNKQYEKALGLFLRMEC 231
NAM+A + R GD+D AL +F P N +SW T+I+GY++N E+AL + + ME
Sbjct: 194 VARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSME- 252
Query: 232 EEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHID 291
E + + + ++L ++L +L+IG+ V A KNG + N +VS+ ++++Y KCG++
Sbjct: 253 ENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMK 312
Query: 292 VAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQM-----------------LR 334
A G NL S +SMI+G + GK +A L+D + LR
Sbjct: 313 YAESAHLLYG-FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLR 371
Query: 335 ---------------EGTTPDDVTFVGLLLACTHGGMVEKGRHIF-KSMKTDFNIIPKLE 378
E TPD + V +L AC+ +E G+ I S++T + KL
Sbjct: 372 QPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL- 430
Query: 379 HYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
VD+ + G + A + + + D+V++ ++ C+ HG+
Sbjct: 431 -VTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHGH 474
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 144/309 (46%), Gaps = 38/309 (12%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G + H IKSG ++ L+++Y+K G L AR +FDEM R V +WNA++A + +
Sbjct: 7 GFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVK 66
Query: 185 FGDVDGALELFRLMP-SRNVVSWTTMISGYSKNKQYE-KALGLFLRMECEE--DIMPNAV 240
F +V A ELF R+++++ T++SG++K E +A+ +F M +E DI +
Sbjct: 67 FNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 241 TLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGH----------- 289
T+ +++ A L + G+++ K G + ++++ MY+KCG
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGS 186
Query: 290 ----------------------IDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALE 327
ID A VF L + SWN++I G A +G +AL+
Sbjct: 187 CVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALK 246
Query: 328 LYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLL 387
+ M G D+ +F +L + ++ G+ + + + + K G +VD+
Sbjct: 247 MAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG-IVDVY 305
Query: 388 GRAGKLREA 396
+ G ++ A
Sbjct: 306 CKCGNMKYA 314
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 234/465 (50%), Gaps = 14/465 (3%)
Query: 29 QIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
Q+H +++G + +L+ A + P+ +V YN +
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 85 XXXXXCFSLYSQMRLLG-HSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
S+++ MR PN G+ LH +K F +
Sbjct: 210 VMNLVP-SVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 144 ATALLDMYAKVGTLELARRLFDEMP-VREVPTWNAMMAGHARFGDVDGALELFRLMPSRN 202
TAL+DMY+K + A +F E+ R + +WN++++G G + A+ELF + S
Sbjct: 269 GTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG 328
Query: 203 V----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG 258
+ +W ++ISG+S+ + +A F RM ++P+ L S+L AC+++ L+ G
Sbjct: 329 LKPDSATWNSLISGFSQLGKVIEAFKFFERM-LSVVMVPSLKCLTSLLSACSDIWTLKNG 387
Query: 259 QRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI-GSLRNLCSWNSMIMGLA 317
+ + + K ++++V ++++MY KCG A R+F+ ++ WN MI G
Sbjct: 388 KEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYG 447
Query: 318 VHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKL 377
HG+C A+E+++ + E P TF +L AC+H G VEKG IF+ M+ ++ P
Sbjct: 448 KHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPST 507
Query: 378 EHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFT 437
EH GCM+DLLGR+G+LREA EVI M SV +LLG+C H + L E AA L
Sbjct: 508 EHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAE 566
Query: 438 LEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSF 482
LEP NP +VILS+IYA+ ++W+ V +R+V+ Q+ K G S
Sbjct: 567 LEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 156/356 (43%), Gaps = 71/356 (19%)
Query: 99 LLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLE 158
+L HSPN++ G++LHA +K+GF DVF ATAL+ MY KV +
Sbjct: 24 ILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVT 83
Query: 159 LARRLFDEMPVREVPTWNAM---------------MAGHARF-----------------G 186
A ++ DEMP R + + NA M G AR G
Sbjct: 84 DALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG 143
Query: 187 DVDGALEL-----------------------------------FRLMPSRNVVSWTTMIS 211
D++G ++L F +P ++VV++ IS
Sbjct: 144 DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 212 GYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFF 271
G +N +F M PN VT + + ACA+L L+ G+++ K F
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 272 KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQ 331
V A+++MY+KC A+ VF E+ RNL SWNS+I G+ ++G+ A+EL+++
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 332 MLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLL 387
+ EG PD T+ L+ + G V + F+ M + ++P L+ C+ LL
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS-VVMVPSLK---CLTSLL 375
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 12/223 (5%)
Query: 237 PNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRV 296
PN T +L +CA LG + G+ + A K GFF +++ + A++ MY K + A +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 297 FNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGM 356
+E+ R + S N+ + GL +G C A ++ G+ + VT +L C G
Sbjct: 89 LDEMPE-RGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GD 144
Query: 357 VEKGRHIF-KSMKTDFNIIPKLEHY--GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWG 413
+E G + +MK+ F ++E Y +V + R G+ A + + +P K V +
Sbjct: 145 IEGGMQLHCLAMKSGF----EMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK-SVVTYN 199
Query: 414 TLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASA 456
+ +G + L + P + ++ I A A
Sbjct: 200 AFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 214/374 (57%), Gaps = 11/374 (2%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEM-PVREVPTWNAMMAGHARFGDVDGALELFRLM 198
D+ + +++ Y K G LE A LF+ + + + +W +M+ G+ GDV A LF+ +
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 199 PSRNVVSWTTMISGYSKNKQYEKALGLFLRM-ECEEDIMPNAVTLASILPACANLGALEI 257
++ V+WT MISG +N+ + +A L M C + P T + +L + L+
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC--GLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 258 GQRVEAYARKNG--FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMG 315
G+ + K + +L + N+++ MYAKCG I+ A+ +F ++ ++ SWNSMIMG
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ-KDTVSWNSMIMG 543
Query: 316 LAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIP 375
L+ HG KAL L+ +ML G P+ VTF+G+L AC+H G++ +G +FK+MK ++I P
Sbjct: 544 LSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQP 603
Query: 376 KLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE----LAEIA 431
++HY M+DLLGRAGKL+EA E I +P PD ++G LLG C + + +AE A
Sbjct: 604 GIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERA 663
Query: 432 AESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHK 491
A L L+P N +V L N+YA + D ++RK M + K+ G S++ G+ +
Sbjct: 664 AMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANV 723
Query: 492 FIVEDRSHPKSNEI 505
F+ D+S ++ ++
Sbjct: 724 FLSGDKSASEAAQM 737
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 158/351 (45%), Gaps = 68/351 (19%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
DV + A++ Y + +E A+ LF +M + V TW +M+ G+ R+GDV A LF MP
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEED-IMPNAVTLASILPACANLGA--LE 256
RN+VSWT MISG++ N+ Y +AL LFL M+ + D + PN TL S+ AC LG
Sbjct: 259 ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 257 IGQRVEAYARKNGF------------FKNLYVS--------------------NAVLEMY 284
+G+++ A NG+ ++Y S N ++ Y
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRY 378
Query: 285 AKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQ------------- 331
K G ++ A +F + SL + SW SMI G G +A L+ +
Sbjct: 379 LKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMI 438
Query: 332 ------------------MLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM-KTDFN 372
M+R G P + T+ LL + +++G+HI + KT
Sbjct: 439 SGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTAC 498
Query: 373 IIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
P L +V + + G + +AYE+ M K D+V W +++ S HG
Sbjct: 499 YDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK-DTVSWNSMIMGLSHHG 548
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 49/269 (18%)
Query: 125 GQMLHAHFI-----KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMM 179
G ++HA + + G V T+LL YAK G L+ AR LF+ MP R + T NAM+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 180 AGHARF------------------------------GDVDGALELFRLMPSRNVVSWTTM 209
G+ + G + A+ELF MP RNVVSW T+
Sbjct: 116 TGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTL 175
Query: 210 ISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNG 269
++G +N EKA +F M + + NA+ I L G E
Sbjct: 176 VTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSE------- 228
Query: 270 FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELY 329
KN+ +++ Y + G + A+R+F E+ RN+ SW +MI G A + +AL L+
Sbjct: 229 --KNVVTWTSMVYGYCRYGDVREAYRLFCEMPE-RNIVSWTAMISGFAWNELYREALMLF 285
Query: 330 DQMLR--EGTTPDDVTFVGLLLACTHGGM 356
+M + + +P+ T + L AC GG+
Sbjct: 286 LEMKKDVDAVSPNGETLISLAYAC--GGL 312
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 6/171 (3%)
Query: 92 SLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSG--FAPDVFAATALLD 149
SL S M G P G+ +H K+ + PD+ +L+
Sbjct: 452 SLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVS 511
Query: 150 MYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLM----PSRNVVS 205
MYAK G +E A +F +M ++ +WN+M+ G + G D AL LF+ M N V+
Sbjct: 512 MYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVT 571
Query: 206 WTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALE 256
+ ++S S + + L LF M+ I P S++ G L+
Sbjct: 572 FLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLK 622
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 186/317 (58%), Gaps = 4/317 (1%)
Query: 177 AMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIM 236
A M + R G+V + LF R+VV W++MISGY++ + + L +M +E I
Sbjct: 292 AFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR-KEGIE 350
Query: 237 PNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRV 296
N+VTL +I+ AC N L V + K GF ++ + NA+++MYAKCG + A V
Sbjct: 351 ANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREV 410
Query: 297 FNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGM 356
F E+ ++L SW+SMI +HG +ALE++ M++ G DD+ F+ +L AC H G+
Sbjct: 411 FYELTE-KDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGL 469
Query: 357 VEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
VE+ + IF + +++ LEHY C ++LLGR GK+ +A+EV MPMKP + IW +LL
Sbjct: 470 VEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLL 528
Query: 417 GACSFHGNVELA-EIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQIT 475
AC HG +++A +I A L EP NP NYV+LS I+ + + ++R+VM+ ++
Sbjct: 529 SACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLN 588
Query: 476 KSAGHSFLEEGGQLHKF 492
K G S +E Q+ +
Sbjct: 589 KCYGFSKIEPELQIEDY 605
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 149/297 (50%), Gaps = 13/297 (4%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLF------DEMPVREVPTWNAMMAGHARFGDVD 189
GF P +LL + ++G+ R+F DE V A++ + +F D
Sbjct: 143 GFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHA 202
Query: 190 GALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPAC 249
A +F M +N VSWT MISG N+ YE + LF M+ E++ PN VTL S+LPAC
Sbjct: 203 AAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQ-RENLRPNRVTLLSVLPAC 261
Query: 250 ANLG-ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCS 308
L + + + ++ ++G + ++ A + MY +CG++ ++ RV E +R++
Sbjct: 262 VELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLS-RVLFETSKVRDVVM 320
Query: 309 WNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS-M 367
W+SMI G A G C + + L +QM +EG + VT + ++ ACT+ ++ + +
Sbjct: 321 WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQIL 380
Query: 368 KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
K F + + ++D+ + G L A EV + K D V W +++ A HG+
Sbjct: 381 KCGF--MSHILLGNALIDMYAKCGSLSAAREVFYELTEK-DLVSWSSMINAYGLHGH 434
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 134/352 (38%), Gaps = 37/352 (10%)
Query: 21 NIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKL 76
N G + VK+IHG++ R G + L + + N+ ++ + S V +++ +
Sbjct: 265 NYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSM 324
Query: 77 LQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSG 136
+ Y +L +QMR G N +H+ +K G
Sbjct: 325 ISGYAETGDCSEV-MNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCG 383
Query: 137 FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFR 196
F + AL+DMYAK G+L AR +F E+ +++ +W++M+ + G ALE+F+
Sbjct: 384 FMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFK 443
Query: 197 LMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALE 256
MI G E D M +IL AC + G +E
Sbjct: 444 -----------GMIKGGH-----------------EVDDM----AFLAILSACNHAGLVE 471
Query: 257 IGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGL 316
Q + A K L + + + G ID A+ V + + W+S++
Sbjct: 472 EAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSAC 531
Query: 317 AVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMK 368
HG+ A ++ L + + +V L T G + + M+
Sbjct: 532 ETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQ 583
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 10/237 (4%)
Query: 196 RLMPSRNVVSWTTMISGYSKNKQYEKALGLF-LRMECEEDIMPNAVT--LASILPACA-N 251
R + SR + + G ++ Y++AL L+ L++ + N T L S++ ACA
Sbjct: 3 RALSSRLNLELGNKLKGLVSDQFYDEALRLYKLKIH---SLGTNGFTAILPSVIKACAFQ 59
Query: 252 LGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNS 311
+G ++ K G + VSN+++ MYAK +VF+E+ R+ S+ S
Sbjct: 60 QEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLH-RDTVSYCS 118
Query: 312 MIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMK-TD 370
+I G +A++L +M G P LL CT G K +F ++ D
Sbjct: 119 IINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVD 178
Query: 371 FNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVEL 427
+ + +VD+ + A+ V M +K + V W ++ C + N E+
Sbjct: 179 ERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVANQNYEM 234
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 227/390 (58%), Gaps = 7/390 (1%)
Query: 133 IKSGFAPDVFAATALLDMYAKVG----TLELARRLFDEMPVREVPTWNAMMAGHARFGDV 188
+K P+V + +L +K+ LE+ L E+ N+++ +A V
Sbjct: 419 VKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKV 478
Query: 189 DGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA 248
D A + R M R+ +++T++++ +++ ++E AL + M + I + ++L + A
Sbjct: 479 DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMY-GDGIRMDQLSLPGFISA 537
Query: 249 CANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCS 308
ANLGALE G+ + Y+ K+GF V N++++MY+KCG ++ A +VF EI + ++ S
Sbjct: 538 SANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVS 596
Query: 309 WNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMK 368
WN ++ GLA +G AL +++M + T PD VTF+ LL AC++G + + G F+ MK
Sbjct: 597 WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMK 656
Query: 369 TDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+NI P++EHY +V +LGRAG+L EA V++TM +KP+++I+ TLL AC + GN+ L
Sbjct: 657 KIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLG 716
Query: 429 EIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQ 488
E A L P +P Y++L+++Y + + + K R +M +++K G S +E G+
Sbjct: 717 EDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGK 776
Query: 489 LHKFIVEDRSH-PKSNEIFALLDGVYEMFK 517
+H F+ ED + K+N I+A ++ + E K
Sbjct: 777 VHSFVSEDVTRVDKTNGIYAEIESIKEEIK 806
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 177/423 (41%), Gaps = 43/423 (10%)
Query: 19 SKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSPNSTVFLYN 74
S +G+ K IH + GI L L+ + + A VL+ S VFL+
Sbjct: 235 SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWT 294
Query: 75 KLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIK 134
++ + + +MR LG PN + G+ +H+ IK
Sbjct: 295 SVVSGFVRNLRAKE-AVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK 353
Query: 135 SGFAPDVFAATALLDMYAKVGTLEL-ARRLFDEMPVREVPTWNAMMAGHARFGDVDGALE 193
GF AL+DMY K E+ A R+F GA
Sbjct: 354 VGFEDSTDVGNALVDMYMKCSASEVEASRVF-------------------------GA-- 386
Query: 194 LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
M S NVVSWTT+I G + + GL + M + ++ PN VTL+ +L AC+ L
Sbjct: 387 ----MVSPNVVSWTTLILGLVDHGFVQDCFGLLMEM-VKREVEPNVVTLSGVLRACSKLR 441
Query: 254 ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
+ + AY + + V N++++ YA +D AW V + N+ ++ S++
Sbjct: 442 HVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNI-TYTSLV 500
Query: 314 MGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF-KSMKTDFN 372
GK AL + + M +G D ++ G + A + G +E G+H+ S+K+ F+
Sbjct: 501 TRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFS 560
Query: 373 IIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAA 432
+ +VD+ + G L +A +V + + PD V W L+ + +G + A A
Sbjct: 561 GAASV--LNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAF 617
Query: 433 ESL 435
E +
Sbjct: 618 EEM 620
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 162/311 (52%), Gaps = 20/311 (6%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPT----WNAMMAGHA 183
++ +K+G P+ F LL + +G LE + + + VR +P +++ ++
Sbjct: 212 FYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYS 270
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
+F ++ A+ + ++V WT+++SG+ +N + ++A+G FL M + PN T +
Sbjct: 271 QFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR-SLGLQPNNFTYS 329
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDV-AWRVFNEIGS 302
+IL C+ + +L+ G+++ + K GF + V NA+++MY KC +V A RVF + S
Sbjct: 330 AILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVS 389
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
N+ SW ++I+GL HG L +M++ P+ VT G+L AC+ K RH
Sbjct: 390 -PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS------KLRH 442
Query: 363 IFKSMKTDFNIIPK-----LEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
+ + ++ ++ + + +VD + K+ A+ VI++M + D++ + +L+
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK-RRDNITYTSLVT 501
Query: 418 ACSFHGNVELA 428
+ G E+A
Sbjct: 502 RFNELGKHEMA 512
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 147/333 (44%), Gaps = 48/333 (14%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +H IK G ++ LL +Y K + AR+LFDEM
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMS---------------- 85
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
R V +WT MIS ++K++++ AL LF M PN T +S
Sbjct: 86 ---------------HRTVFAWTVMISAFTKSQEFASALSLFEEM-MASGTHPNEFTFSS 129
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ +CA L + G RV K GF N V +++ ++Y+KCG A +F+ + +
Sbjct: 130 VVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNAD 189
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ SW MI L K +AL+ Y +M++ G P++ TFV LL A + G+ E G+ I
Sbjct: 190 TI-SWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIH 247
Query: 365 KSM---KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
++ N++ K +VD + K+ +A V+ + + D +W +++ F
Sbjct: 248 SNIIVRGIPLNVVLKTS----LVDFYSQFSKMEDAVRVLNS-SGEQDVFLWTSVVSG--F 300
Query: 422 HGNVELAEIAAESL----FTLEPRNPGNYVILS 450
N+ E L L+P N ILS
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 9/241 (3%)
Query: 24 MNQVKQIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQA 79
+ +V +IH Y LR +D +L++ + YA V+ Y L+
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR 502
Query: 80 YXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP 139
+ S+ + M G +Q G+ LH + +KSGF+
Sbjct: 503 FNELGKHEM-ALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSG 561
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
+L+DMY+K G+LE A+++F+E+ +V +WN +++G A G + AL F M
Sbjct: 562 AASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMR 621
Query: 200 SR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL 255
+ + V++ ++S S + + L F M+ +I P ++ G L
Sbjct: 622 MKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRL 681
Query: 256 E 256
E
Sbjct: 682 E 682
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
IL C + + IG + K G +NL + N +L +Y K I A ++F+E+ S R
Sbjct: 30 ILSFCES-NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM-SHR 87
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ +W MI + AL L+++M+ GT P++ TF ++ +C + G +
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 365 KS-MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
S +KT F + + DL + G+ +EA E+ ++ D++ W ++ +
Sbjct: 148 GSVIKTGFEGNSVVG--SSLSDLYSKCGQFKEACELFSSL-QNADTISWTMMISS 199
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 208/389 (53%), Gaps = 7/389 (1%)
Query: 25 NQVKQIHGYTLRTGIDQTKTLIEKLLEIPN----LHYAQAVLHHSPNSTVFLYNKLLQAY 80
+Q+KQIH ++ + + L+ +L+ + + YA V + + + F +N ++++
Sbjct: 34 SQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSL 93
Query: 81 XXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPD 140
M +++ G +H IK+GF D
Sbjct: 94 SVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFND 153
Query: 141 VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPS 200
VF L+D+Y K G + R++FD+MP R + +W M+ G +D A +F MP
Sbjct: 154 VFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPM 213
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR 260
RNVVSWT MI+ Y KN++ ++A LF RM+ +D+ PN T+ ++L A LG+L +G+
Sbjct: 214 RNVVSWTAMITAYVKNRRPDEAFQLFRRMQV-DDVKPNEFTIVNLLQASTQLGSLSMGRW 272
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
V YA KNGF + ++ A+++MY+KCG + A +VF ++ ++L +WNSMI L VHG
Sbjct: 273 VHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVF-DVMQGKSLATWNSMITSLGVHG 331
Query: 321 KCGKALELYDQMLREGTT-PDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
+AL L+++M E + PD +TFVG+L AC + G V+ G F M + I P EH
Sbjct: 332 CGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREH 391
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPD 408
CM+ LL +A ++ +A ++++M PD
Sbjct: 392 NACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 207/406 (50%), Gaps = 73/406 (17%)
Query: 129 HAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDV 188
H +K+G+A AL+DMYAK G +
Sbjct: 352 HCLIVKTGYATYKLVNNALVDMYAKRGIM------------------------------- 380
Query: 189 DGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA 248
D AL++F M ++V+SWT +++G + N Y++AL LF M I P+ + AS+L A
Sbjct: 381 DSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG-GITPDKIVTASVLSA 439
Query: 249 CANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCS 308
A L LE GQ+V K+GF +L V+N+++ MY KCG ++ A +FN + +R+L
Sbjct: 440 SAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSM-EIRDL-- 496
Query: 309 WNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMK 368
+T+ L++ G++E + F SM+
Sbjct: 497 ---------------------------------ITWTCLIVGYAKNGLLEDAQRYFDSMR 523
Query: 369 TDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
T + I P EHY CM+DL GR+G + +++ M ++PD+ +W +L A HGN+E
Sbjct: 524 TVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENG 583
Query: 429 EIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQ 488
E AA++L LEP N YV LSN+Y++A + D A +R++MK I+K G S++EE G+
Sbjct: 584 ERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGK 643
Query: 489 LHKFIVEDRSHPKSNEIFALLDGVYEMFK----FNRSAFECHLDLD 530
+H F+ EDR HP+ EI++ +D + + K F +F H DLD
Sbjct: 644 VHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALH-DLD 688
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 143/278 (51%), Gaps = 5/278 (1%)
Query: 147 LLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSW 206
LL +K G ++ AR++FD+MP R+ TWN M+ ++ + A +LFR P +N +SW
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISW 93
Query: 207 TTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYAR 266
+ISGY K+ +A LF M+ + I PN TL S+L C +L L G+++ +
Sbjct: 94 NALISGYCKSGSKVEAFNLFWEMQ-SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTI 152
Query: 267 KNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKAL 326
K GF ++ V N +L MYA+C I A +F + +N +W SM+ G + +G KA+
Sbjct: 153 KTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAI 212
Query: 327 ELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM-KTDFNIIPKLEHYGCMVD 385
E + + REG + TF +L AC G + + K+ F ++ ++D
Sbjct: 213 ECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ--SALID 270
Query: 386 LLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ + ++ A +++ M + D V W +++ C G
Sbjct: 271 MYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQG 307
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 168/379 (44%), Gaps = 44/379 (11%)
Query: 55 LHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXX 114
L A+ + +P +N L+ Y F+L+ +M+ G PN+Y
Sbjct: 75 LSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEA-FNLFWEMQSDGIKPNEYTLGSVLR 133
Query: 115 XXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPT 174
G+ +H H IK+GF DV LL MYA+ + A LF+ M
Sbjct: 134 MCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME------ 187
Query: 175 WNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEED 234
+N V+WT+M++GYS+N KA+ F + E +
Sbjct: 188 ------------------------GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN 223
Query: 235 IMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAW 294
N T S+L ACA++ A +G +V K+GF N+YV +A+++MYAKC ++ A
Sbjct: 224 -QSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESA- 281
Query: 295 RVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLL--LACT 352
R E + ++ SWNSMI+G G G+AL ++ +M DD T +L A +
Sbjct: 282 RALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALS 341
Query: 353 HGGM-VEKGRH--IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDS 409
M + H I K+ + ++ +VD+ + G + A +V + M ++ D
Sbjct: 342 RTEMKIASSAHCLIVKTGYATYKLVN-----NALVDMYAKRGIMDSALKVFEGM-IEKDV 395
Query: 410 VIWGTLLGACSFHGNVELA 428
+ W L+ + +G+ + A
Sbjct: 396 ISWTALVTGNTHNGSYDEA 414
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 210/489 (42%), Gaps = 62/489 (12%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLL-------EIPNLHYAQAVLHHSPNSTVFLYNKLLQAY 80
+QIHG+T++TG D ++ LL I Y + N+ + +L Y
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVT--WTSMLTGY 202
Query: 81 XXX--XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFA 138
CF +R G+ NQY G +H +KSGF
Sbjct: 203 SQNGFAFKAIECFR---DLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFK 259
Query: 139 PDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLM 198
+++ +AL+DMYAK +E AR L + M V +V +WN+M+ G R G + AL +F M
Sbjct: 260 TNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM 319
Query: 199 PSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACA-NLGALEI 257
R D+ + T+ SIL A + ++I
Sbjct: 320 HER--------------------------------DMKIDDFTIPSILNCFALSRTEMKI 347
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLA 317
K G+ V+NA+++MYAK G +D A +VF + +++ SW +++ G
Sbjct: 348 ASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE-KDVISWTALVTGNT 406
Query: 318 VHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS-MKTDFNIIPK 376
+G +AL+L+ M G TPD + +L A ++E G+ + + +K+ F
Sbjct: 407 HNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFP--SS 464
Query: 377 LEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLF 436
L +V + + G L +A + +M ++ D + W L+ + +G +E A+ +S+
Sbjct: 465 LSVNNSLVTMYTKCGSLEDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQRYFDSMR 523
Query: 437 TLEPRNPG--NYVILSNIYASADQWDGVAKLRKVMK--------GSQITKSAGHSFLEEG 486
T+ PG +Y + +++ + + V +L M+ + + S H +E G
Sbjct: 524 TVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENG 583
Query: 487 GQLHKFIVE 495
+ K ++E
Sbjct: 584 ERAAKTLME 592
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 22/232 (9%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
L+ MR+ G +P++ GQ +H ++IKSGF + +L+ M
Sbjct: 415 LKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTM 474
Query: 151 YAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVS----- 205
Y K G+LE A +F+ M +R++ TW ++ G+A+ G ++ A F M + ++
Sbjct: 475 YTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEH 534
Query: 206 WTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYA 265
+ MI + ++ + K L +ME E P+A +IL A G +E G+R
Sbjct: 535 YACMIDLFGRSGDFVKVEQLLHQMEVE----PDATVWKAILAASRKHGNIENGERAAKTL 590
Query: 266 RK---NGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL-----CSW 309
+ N + +SN MY+ G D A V + S RN+ CSW
Sbjct: 591 MELEPNNAVPYVQLSN----MYSAAGRQDEAANVRRLMKS-RNISKEPGCSW 637
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 200/349 (57%), Gaps = 4/349 (1%)
Query: 171 EVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRME 230
+ P N+++ +A+ G +D +L +F M R++VSW +ISGY++N KAL LF M+
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK 439
Query: 231 CEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHI 290
+ ++ T+ S+L AC++ GAL +G+ + ++ V A+++MY+KCG++
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYL 499
Query: 291 DVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA 350
+ A R F+ I S +++ SW +I G HGK ALE+Y + L G P+ V F+ +L +
Sbjct: 500 EAAQRCFDSI-SWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Query: 351 CTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSV 410
C+H GMV++G IF SM DF + P EH C+VDLL RA ++ +A++ + +P
Sbjct: 559 CSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSID 618
Query: 411 IWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMK 470
+ G +L AC +G E+ +I E + L+P + G+YV L + +A+ +WD V++ M+
Sbjct: 619 VLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMR 678
Query: 471 GSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGV-YEMFKF 518
+ K G S +E G+ F + SH S++ +LL + EM +F
Sbjct: 679 SLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQF 725
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 44/310 (14%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +H + +GF+ D + +++L+++YAK G L AR++F+EM R+V W AM+ ++R
Sbjct: 65 GLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSR 124
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G V A L M + I P VTL
Sbjct: 125 AGIVGEACSLVNEMRFQG--------------------------------IKPGPVTLLE 152
Query: 245 ILPACANLGALEIGQR--VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+L G LEI Q + +A GF ++ V N++L +Y KC H+ A +F+++
Sbjct: 153 MLS-----GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ 207
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
R++ SWN+MI G A G + L+L +M +G PD TF L +E GR
Sbjct: 208 -RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRM 266
Query: 363 IF-KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
+ + +KT F++ L+ ++ + + GK +Y V++T+P K D V W ++
Sbjct: 267 LHCQIVKTGFDVDMHLK--TALITMYLKCGKEEASYRVLETIPNK-DVVCWTVMISGLMR 323
Query: 422 HGNVELAEIA 431
G E A I
Sbjct: 324 LGRAEKALIV 333
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 23/228 (10%)
Query: 206 WTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYA 265
+ + I+ S + +++ L F M + ++P+ T S+L ACA+L L G +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANK-LLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 266 RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKA 325
NGF + Y+S++++ +YAK G + A +VF E+ R++ W +MI + G G+A
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRE-RDVVHWTAMIGCYSRAGIVGEA 131
Query: 326 LELYDQMLREGTTPDDVTFVGLL--------LACTHGGMVEKGRHIFKSMKTDFNIIPKL 377
L ++M +G P VT + +L L C H V G D ++ +
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYG------FDCDIAVMNSM 185
Query: 378 EHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNV 425
+ C D +G A L + E + D V W T++ + GN+
Sbjct: 186 LNLYCKCDHVGDAKDLFDQME-------QRDMVSWNTMISGYASVGNM 226
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 209/404 (51%), Gaps = 41/404 (10%)
Query: 67 NSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQ 126
+S+ F +N L+ Y +LY QM G P+++ G+
Sbjct: 157 DSSPFAWNSLISGYAELGQYED-AMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGE 215
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG 186
+H +K GF DV+ AL+ MYAK G
Sbjct: 216 AIHRDLVKEGFGYDVYVLNALVVMYAKCG------------------------------- 244
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
D+ A +F ++P ++ VSW +M++GY + +AL +F R+ + I P+ V ++S+L
Sbjct: 245 DIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIF-RLMVQNGIEPDKVAISSVL 303
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
A + + + G+++ + + G L V+NA++ +Y+K G + A +F+++ R+
Sbjct: 304 ---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE-RDT 359
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
SWN++I + H K L+ ++QM R PD +TFV +L C + GMVE G +F
Sbjct: 360 VSWNAII---SAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSL 416
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYE-VIQTMPMKPDSVIWGTLLGACSFHGNV 425
M ++ I PK+EHY CMV+L GRAG + EAY ++Q M ++ +WG LL AC HGN
Sbjct: 417 MSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNT 476
Query: 426 ELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVM 469
++ E+AA+ LF LEP N N+ +L IY+ A + + V ++R++M
Sbjct: 477 DIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMM 520
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 7/185 (3%)
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
AS+L C +L A++ G RV NL +S+ ++ +YA CG+ +VA VF+ +
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM- 153
Query: 302 SLRNLC--SWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEK 359
S R+ +WNS+I G A G+ A+ LY QM +G PD TF +L AC G V+
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 360 GRHIFKSM-KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
G I + + K F + +V + + G + +A V +P K D V W ++L
Sbjct: 214 GEAIHRDLVKEGFGY--DVYVLNALVVMYAKCGDIVKARNVFDMIPHK-DYVSWNSMLTG 270
Query: 419 CSFHG 423
HG
Sbjct: 271 YLHHG 275
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 207/417 (49%), Gaps = 33/417 (7%)
Query: 104 PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRL 163
PN+Y G+ +HA SG ++ +++L+DMY K +E ARR+
Sbjct: 129 PNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRV 188
Query: 164 FDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKAL 223
FD M + RNVVSWT+MI+ Y++N + +A+
Sbjct: 189 FDSM-----------------------------IGYGRNVVSWTSMITAYAQNARGHEAI 219
Query: 224 GLFLRMECE-EDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLE 282
LF N LAS++ AC++LG L+ G+ + G+ N V+ ++L+
Sbjct: 220 ELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLD 279
Query: 283 MYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDV 342
MYAKCG + A ++F I ++ S+ SMIM A HG A++L+D+M+ P+ V
Sbjct: 280 MYAKCGSLSCAEKIFLRI-RCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYV 338
Query: 343 TFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQT 402
T +G+L AC+H G+V +G M + ++P HY C+VD+LGR G++ EAYE+ +T
Sbjct: 339 TLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKT 398
Query: 403 MPMKPD--SVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWD 460
+ + + +++WG LL A HG VE+ A++ L + Y+ LSN YA + W+
Sbjct: 399 IEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWE 458
Query: 461 GVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
LR MK S K S++E ++ F D S +S EI L + + K
Sbjct: 459 DSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMK 515
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 46/331 (13%)
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
+LH +K GFA D F L+ Y K+ + AR+L
Sbjct: 49 NLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKL---------------------- 86
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
F M NVVSWT++ISGY+ + + AL +F +M + + PN T AS+
Sbjct: 87 ---------FDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASV 137
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE-IGSLR 304
AC+ L IG+ + A +G +N+ VS+++++MY KC ++ A RVF+ IG R
Sbjct: 138 FKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGR 197
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT---FVGLLLACTHGGMVEKGR 361
N+ SW SMI A + + +A+EL+ + T D ++ AC+ G ++ G+
Sbjct: 198 NVVSWTSMITAYAQNARGHEAIELF-RSFNAALTSDRANQFMLASVISACSSLGRLQWGK 256
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVI-WGTLLGACS 420
+ + T ++D+ + G L A ++ + ++ SVI + +++ A +
Sbjct: 257 -VAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIF--LRIRCHSVISYTSMIMAKA 313
Query: 421 FHGNVELAEIAAESLFT--LEPRNPGNYVIL 449
HG L E AA LF + R NYV L
Sbjct: 314 KHG---LGE-AAVKLFDEMVAGRINPNYVTL 340
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 204/392 (52%), Gaps = 38/392 (9%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
LH+ +KSG ATAL+ +Y+++ D
Sbjct: 289 LHSLTVKSGLVTQTEVATALIKVYSEM------------------------------LED 318
Query: 188 VDGALELFRLMP-SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
+LF M R++V+W +I+ ++ E+A+ LF ++ +E + P+ T +S+L
Sbjct: 319 YTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLR-QEKLSPDWYTFSSVL 376
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
ACA L + A K GF + ++N+++ YAKCG +D+ RVF+++ S R++
Sbjct: 377 KACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDS-RDV 435
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
SWNSM+ ++HG+ L ++ +M PD TF+ LL AC+H G VE+G IF+S
Sbjct: 436 VSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRS 492
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE 426
M +P+L HY C++D+L RA + EA EVI+ MPM PD+V+W LLG+C HGN
Sbjct: 493 MFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTR 552
Query: 427 LAEIAAESLFTL-EPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEE 485
L ++AA+ L L EP N +Y+ +SNIY + ++ K M+ ++ K S+ E
Sbjct: 553 LGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEI 612
Query: 486 GGQLHKFIVEDRSHPKSNEIFALLDGVYEMFK 517
G ++H+F R P ++ L + K
Sbjct: 613 GNKVHEFASGGRHRPDKEAVYRELKRLISWLK 644
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 103/228 (45%), Gaps = 43/228 (18%)
Query: 125 GQMLHAHFIKS--GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGH 182
G LH H + ++ +V A L++MYAK G + AR++FD
Sbjct: 78 GINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT---------------- 121
Query: 183 ARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
MP RNVVSWT +I+GY + ++ LF M PN TL
Sbjct: 122 ---------------MPERNVVSWTALITGYVQAGNEQEGFCLFSSML--SHCFPNEFTL 164
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKC---GHIDVAWRVFNE 299
+S+L +C E G++V A K G ++YV+NAV+ MY +C AW VF
Sbjct: 165 SSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEA 220
Query: 300 IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGL 347
I +NL +WNSMI KA+ ++ +M +G D T + +
Sbjct: 221 I-KFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 166/422 (39%), Gaps = 83/422 (19%)
Query: 31 HGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXC 90
H Y + LI + N+ YA+ V P V + L+ Y
Sbjct: 88 HPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEG- 146
Query: 91 FSLYSQMRLLGHS-PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLD 149
F L+S M L H PN++ G+ +H +K G ++ A A++
Sbjct: 147 FCLFSSM--LSHCFPNEF----TLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVIS 200
Query: 150 MYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTM 209
MY R D E T +F + +N+V+W +M
Sbjct: 201 MYG---------RCHDGAAAYEAWT-------------------VFEAIKFKNLVTWNSM 232
Query: 210 ISGYSKNKQYEKALGLFLRMECE-------------------EDIMPNAVTLASILPACA 250
I+ + +KA+G+F+RM + D++PN V+ C
Sbjct: 233 IAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVS-----KCCL 287
Query: 251 NLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKC--GHIDVAWRVFNEIGSLRNLCS 308
L +L + K+G V+ A++++Y++ + D +++F E+ R++ +
Sbjct: 288 QLHSLTV---------KSGLVTQTEVATALIKVYSEMLEDYTD-CYKLFMEMSHCRDIVA 337
Query: 309 WNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF---- 364
WN +I AV+ +A+ L+ Q+ +E +PD TF +L AC G+V RH
Sbjct: 338 WNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLV-TARHALSIHA 393
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+ +K F L + ++ + G L V M + D V W ++L A S HG
Sbjct: 394 QVIKGGFLADTVLNN--SLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKAYSLHGQ 450
Query: 425 VE 426
V+
Sbjct: 451 VD 452
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 226/451 (50%), Gaps = 43/451 (9%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHH---SPNSTVFLYNKLLQAY 80
KQ+H +++G++ + I L+++ +L YA V H + NS+V ++N +L +
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 81 XXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPD 140
+ L Q+ + Y G +H+ + SG+ D
Sbjct: 318 LINEENEAALWLLL-QIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELD 376
Query: 141 VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPS 200
+ L+D++A VG ++ A +LF +P +++ ++ ++ G + G A LFR +
Sbjct: 377 YIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFREL-- 434
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR 260
+ L ++ ++ I+ N IL C++L +L G++
Sbjct: 435 ------------------------IKLGLDADQFIVSN------ILKVCSSLASLGWGKQ 464
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL-RNLCSWNSMIMGLAVH 319
+ K G+ + A+++MY KCG ID +F+ G L R++ SW +I+G +
Sbjct: 465 IHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFD--GMLERDVVSWTGIIVGFGQN 522
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G+ +A + +M+ G P+ VTF+GLL AC H G++E+ R ++MK+++ + P LEH
Sbjct: 523 GRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEH 582
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
Y C+VDLLG+AG +EA E+I MP++PD IW +LL AC H N L + AE L
Sbjct: 583 YYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGF 642
Query: 440 PRNPGNYVILSNIYASADQWDGVAKLRKVMK 470
P +P Y LSN YA+ WD ++K+R+ K
Sbjct: 643 PDDPSVYTSLSNAYATLGMWDQLSKVREAAK 673
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 151/311 (48%), Gaps = 16/311 (5%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +++ K DV +++DMY K G L A F E+ +WN +++G+ +
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCK 185
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G +D A+ LF MP NVVSW +ISG+ +K +AL +RM+ E ++ + L
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLISGFV-DKGSPRALEFLVRMQ-REGLVLDGFALPC 243
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE--IGS 302
L AC+ G L +G+++ K+G + + +A+++MY+ CG + A VF++ +
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAV 303
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
++ WNSM+ G ++ + AL L Q+ + D T G L C + + G
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 363 -----IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
+ + D+ I+ + +VDL G +++A+++ +P K D + + L+
Sbjct: 364 VHSLVVVSGYELDY-IVGSI-----LVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIR 416
Query: 418 ACSFHGNVELA 428
C G LA
Sbjct: 417 GCVKSGFNSLA 427
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 131/327 (40%), Gaps = 71/327 (21%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ + AH IK G + +VF A ++ MY L A ++FDEM R + TW M++G+
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G + A+EL+R RM E+ N ++
Sbjct: 84 DGKPNKAIELYR-------------------------------RMLDSEEEAANEFMYSA 112
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L AC +G +++G V K ++ + N+V++MY K G + A F EI LR
Sbjct: 113 VLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI--LR 170
Query: 305 --------------------------------NLCSWNSMIMGLAVHGKCGKALELYDQM 332
N+ SWN +I G G +ALE +M
Sbjct: 171 PSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRM 229
Query: 333 LREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS-MKTDFNIIPKLEHYGCMVDLLGRAG 391
REG D L AC+ GG++ G+ + +K+ P ++D+ G
Sbjct: 230 QREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPF--AISALIDMYSNCG 287
Query: 392 KLREAYEVI--QTMPMKPDSVIWGTLL 416
L A +V + + + +W ++L
Sbjct: 288 SLIYAADVFHQEKLAVNSSVAVWNSML 314
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 5/180 (2%)
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
+A+ L C + A + G+ ++A+ K G +N++++N V+ MY + A +VF+E+
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM- 66
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQML-REGTTPDDVTFVGLLLACTHGGMVEKG 360
S RN+ +W +M+ G GK KA+ELY +ML E ++ + +L AC G ++ G
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 361 RHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL-GAC 419
+++ + + N+ + +VD+ + G+L EA + + ++P S W TL+ G C
Sbjct: 127 ILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYC 184
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 186/334 (55%), Gaps = 11/334 (3%)
Query: 157 LELARRLFDEMPV---REVPTW--NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMIS 211
L L R F + + RE+ T N ++ + R D++ A+++F L+ N+ SW +IS
Sbjct: 596 LVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVIS 655
Query: 212 GYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFF 271
S+NK + LF ++ E PN +T +L A LG+ G + + + GF
Sbjct: 656 ALSQNKAGREVFQLFRNLKLE----PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQ 711
Query: 272 KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQ 331
N +VS A+++MY+ CG ++ +VF G + ++ +WNS+I HG KA+EL+ +
Sbjct: 712 ANPFVSAALVDMYSSCGMLETGMKVFRNSG-VNSISAWNSVISAHGFHGMGEKAMELFKE 770
Query: 332 MLREGT-TPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRA 390
+ P+ +F+ LL AC+H G +++G +K M+ F + P EH +VD+LGRA
Sbjct: 771 LSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRA 830
Query: 391 GKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILS 450
GKLREAYE I + + +WG LL AC++HG+ +L + AE LF +EP N Y+ L+
Sbjct: 831 GKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLA 890
Query: 451 NIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
N Y W+ +LRK+++ + + K G+S ++
Sbjct: 891 NTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVID 924
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 163/408 (39%), Gaps = 62/408 (15%)
Query: 26 QVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQAYX 81
+ +H + TG+ +L L+ + NL A+ V H + + +N ++
Sbjct: 206 KCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCL 265
Query: 82 XXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPD- 140
+ M G + G+ LH IKSG++P+
Sbjct: 266 ANGHPRKS-LQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 141 -VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMP 199
V +++ MY+K G E A +F+E+ R+V + NA++
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAIL-------------------- 364
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
+G++ N +E+A G+ +M+ + I P+ T+ SI C +L G+
Sbjct: 365 -----------NGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGR 413
Query: 260 RVEAYA-RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAV 318
V Y R + L V N+V++MY KCG A +F + + R+L SWNSMI +
Sbjct: 414 AVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF-KTTTHRDLVSWNSMISAFSQ 472
Query: 319 HGKCGKALELYDQMLREGTTP--DDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPK 376
+G KA L+ +++ E + T + +L +C +D I K
Sbjct: 473 NGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCD---------------SSDSLIFGK 517
Query: 377 LEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
H L + G L A+ ++TM D W +++ C+ G+
Sbjct: 518 SVHC-----WLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGH 560
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 151/365 (41%), Gaps = 69/365 (18%)
Query: 146 ALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA---------------------- 183
+++DMY K G A LF R++ +WN+M++ +
Sbjct: 434 SVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCS 493
Query: 184 -------------------------------RFGDVDGA-LELFRLMPSRNVVSWTTMIS 211
+ GD+ A L L + +R++ SW ++IS
Sbjct: 494 KFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVIS 553
Query: 212 GYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFF 271
G + + + ++L F M E I + +TL + A NLG + G+ A K+
Sbjct: 554 GCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRE 613
Query: 272 KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQ 331
+ + N ++ MY +C I+ A +VF I S NLCSWN +I L+ + + +L+
Sbjct: 614 LDTQLQNTLITMYGRCKDIESAVKVFGLI-SDPNLCSWNCVISALSQNKAGREVFQLFRN 672
Query: 332 MLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM-KTDFNIIPKLEHYGCMVDLLGRA 390
+ E P+++TFVGLL A T G G + + F P + +VD+
Sbjct: 673 LKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSC 727
Query: 391 GKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA-----EIAAESLFTLEPRNPGN 445
G L +V + + S W +++ A FHG E A E+++ S +EP
Sbjct: 728 GMLETGMKVFRNSGVNSISA-WNSVISAHGFHGMGEKAMELFKELSSNS--EMEPNKSSF 784
Query: 446 YVILS 450
+LS
Sbjct: 785 ISLLS 789
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 51/285 (17%)
Query: 166 EMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGL 225
EM R + N+++ + + G A LF+ R++VSW +MIS +S+N KA L
Sbjct: 423 EMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482
Query: 226 FLRMECEEDIMPNAV-TLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMY 284
F + E ++ T+ +IL +C + +L G+ V + +
Sbjct: 483 FKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ------------------ 524
Query: 285 AKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDD-VT 343
K G + A+ + R+L SWNS+I G A G ++L + M REG D +T
Sbjct: 525 -KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLIT 583
Query: 344 FVGLLLACTHGGMVEKGRHI----FKSMK------------------------TDFNII- 374
+G + A + G+V +GR KS++ F +I
Sbjct: 584 LLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLIS 643
Query: 375 -PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
P L + C++ L + RE +++ + + ++P+ + + LL A
Sbjct: 644 DPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSA 688
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 118/298 (39%), Gaps = 52/298 (17%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
F L+ ++L PN+ G H H I+ GF + F + AL+DM
Sbjct: 667 FQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDM 723
Query: 151 YAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMI 210
Y+ G LE ++F V + WN++++ H G + A+ELF+ + S
Sbjct: 724 YSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSS---------- 773
Query: 211 SGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG-----QRVEAYA 265
N + E PN + S+L AC++ G ++ G Q E +
Sbjct: 774 -----NSEME----------------PNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFG 812
Query: 266 RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKA 325
K ++ +++M + G + A+ IG + W +++ HG
Sbjct: 813 VKPVTEHRVW----IVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLG 868
Query: 326 LELYDQMLREGTTPDDVTFVGLLLACTH---GGMVEKGRHIFKSMKTDFNIIPKLEHY 380
E+ + + PD+ ++ + LA T+ GG E R + M D N + KL Y
Sbjct: 869 KEVAEVLFE--MEPDNASYY-ISLANTYVGLGGWEEAVR--LRKMVED-NALKKLPGY 920
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 49/233 (21%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
+H +K G D+ ++ LL Y + G L + LFDE+ ++V WN
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWN----------- 157
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRM--------ECEEDIMPNA 239
+MI+ ++N +Y A+GLF+ M + +A
Sbjct: 158 --------------------SMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASA 197
Query: 240 VTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE 299
++ + C+ L L I + G + + NA++ +YAK ++ A VF
Sbjct: 198 LSSLHLSRKCSMLHCLAI---------ETGLVGDSSLCNALMNLYAKGENLSSAECVFTH 248
Query: 300 IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
+ R++ SWN+++ +G K+L+ + M G D VTF ++ AC+
Sbjct: 249 M-EHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 185/343 (53%), Gaps = 34/343 (9%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +HA K + D+ ATALL+MYAK L AR
Sbjct: 260 GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDAR----------------------- 296
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
E F M RNVVSW MI G+++N + +A+ LF +M E ++ P+ +T AS
Sbjct: 297 --------ECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE-NLQPDELTFAS 347
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L +CA A+ ++V+A K G L V+N+++ Y++ G++ A F+ I
Sbjct: 348 VLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE-P 406
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+L SW S+I LA HG ++L++++ ML++ PD +TF+ +L AC+HGG+V++G F
Sbjct: 407 DLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCF 465
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
K M + I + EHY C++DLLGRAG + EA +V+ +MP +P + G C+ H
Sbjct: 466 KRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEK 525
Query: 425 VELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRK 467
E + A+ L +EP P NY ILSN Y S W+ A LRK
Sbjct: 526 RESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRK 568
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 186/426 (43%), Gaps = 46/426 (10%)
Query: 24 MNQVKQIHGYTLRTGIDQTKTLIEKLLE----IPNLHYAQAVLHHSPNSTVFLYNKLL-- 77
++ VKQ HG+ ++ GI + L KLL+ I A + P + +N L+
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHG 111
Query: 78 --QAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKS 135
Q F S++ S + G LH +K
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ 171
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELF 195
G F +T+L+ Y K G + ARR+F+ + R++ WNA+++ + G +D A L
Sbjct: 172 GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLL 231
Query: 196 RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL 255
+LM G KN+ + T +S+L AC +
Sbjct: 232 KLM-------------GSDKNR-----------------FRGDYFTFSSLLSAC----RI 257
Query: 256 EIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMG 315
E G+++ A K + ++ V+ A+L MYAK H+ A F + +RN+ SWN+MI+G
Sbjct: 258 EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESM-VVRNVVSWNAMIVG 316
Query: 316 LAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIP 375
A +G+ +A+ L+ QML E PD++TF +L +C + + + + ++M T
Sbjct: 317 FAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV-QAMVTKKGSAD 375
Query: 376 KLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESL 435
L ++ R G L EA ++ +PD V W +++GA + HG E + ES+
Sbjct: 376 FLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEESLQMFESM 434
Query: 436 FT-LEP 440
L+P
Sbjct: 435 LQKLQP 440
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 100/214 (46%), Gaps = 14/214 (6%)
Query: 250 ANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSW 309
A+L L ++ + K G + +L++ N +L+ Y K D A ++F+E+ LRN+ +W
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEM-PLRNIVTW 105
Query: 310 NSMIMGLA-----VHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
N +I G+ + + ++L + D V+F+GL+ CT ++ G +
Sbjct: 106 NILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLH 165
Query: 365 KSMKT---DFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
M + + P +V G+ G + EA V + + + D V+W L+ +
Sbjct: 166 CLMVKQGLESSCFPSTS----LVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSSYVL 220
Query: 422 HGNVELAEIAAESLFTLEPRNPGNYVILSNIYAS 455
+G ++ A + + + + R G+Y S++ ++
Sbjct: 221 NGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSA 254
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 196/355 (55%), Gaps = 10/355 (2%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR-EVPTWNAMMAGHARFGDVDGALEL 194
G PD F +LL + LE+ + + + ++ NA+++ +++ G ++ A L
Sbjct: 384 GVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLL 443
Query: 195 FRLMPSRNVVSWTTMISGYSKNKQYEKALGLF-LRMECEEDIMPNAVTLASILPACANLG 253
F +N++SW +ISG+ N + L F +E E I+P+A TL+++L C +
Sbjct: 444 FERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTS 503
Query: 254 ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMI 313
+L +G + AY ++G FK + NA++ MY++CG I + VFN++ S +++ SWNS+I
Sbjct: 504 SLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQM-SEKDVVSWNSLI 562
Query: 314 MGLAVHGKCGKALELYDQMLREG-TTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFN 372
+ HG+ A+ Y M EG PD TF +L AC+H G+VE+G IF SM
Sbjct: 563 SAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHG 622
Query: 373 IIPKLEHYGCMVDLLGRAGKLREAYEVI----QTMPMKPDSVIWGTLLGACSFHGNVELA 428
+I ++H+ C+VDLLGRAG L EA ++ +T+ + D +W L AC+ HG+++L
Sbjct: 623 VIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVD--VWWALFSACAAHGDLKLG 680
Query: 429 EIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFL 483
++ A+ L E +P YV LSNIYA A W + R+ + K G S++
Sbjct: 681 KMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 156/320 (48%), Gaps = 16/320 (5%)
Query: 104 PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRL 163
P+QY G +H + I+SG + LL +Y ++G L ++
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 164 FDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVS-WTTMISGYSKNKQYEKA 222
FDE+ +V +W +++ + GD++ A E+F MP R+ V+ W MI+G ++ +E +
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 223 LGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLE 282
+ LF M + + + A+IL C + G+L+ G++V + K GFF V NA++
Sbjct: 175 VELFREMH-KLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALIT 232
Query: 283 MYAKCGHIDVAWRVFNEIG-SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDD 341
MY C + A VF E ++R+ ++N +I GLA K ++L ++ +ML P D
Sbjct: 233 MYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGF-KRDESLLVFRKMLEASLRPTD 291
Query: 342 VTFVGLLLACTHGGMVEKGRHI-FKSMKTDFNIIPK--LEHYGCMVDLLGRAGKLREAYE 398
+TFV ++ +C+ M + + K+ + ++ + Y D G A K+ E+ E
Sbjct: 292 LTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFED-FGAAHKVFESLE 350
Query: 399 VIQTMPMKPDSVIWGTLLGA 418
+ D V W T++ +
Sbjct: 351 -------EKDLVTWNTMISS 363
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 19/260 (7%)
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
NA M ++ F D A ++F + +++V+W TMIS Y++ K + A+ ++ RM +
Sbjct: 327 NATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI-IGV 385
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWR 295
P+ T S+L +L LE+ V+A K G + +SNA++ Y+K G I+ A
Sbjct: 386 KPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADL 442
Query: 296 VFNEIGSLR-NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTT--PDDVTFVGLLLAC- 351
+F SLR NL SWN++I G +G + LE + +L PD T LL C
Sbjct: 443 LFER--SLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICV 500
Query: 352 -THGGMVEKGRHIFKSMKTDF--NIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPD 408
T M+ H + F +I ++++ + G ++ + EV M K D
Sbjct: 501 STSSLMLGSQTHAYVLRHGQFKETLIGN-----ALINMYSQCGTIQNSLEVFNQMSEK-D 554
Query: 409 SVIWGTLLGACSFHGNVELA 428
V W +L+ A S HG E A
Sbjct: 555 VVSWNSLISAYSRHGEGENA 574
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 132/297 (44%), Gaps = 50/297 (16%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
L S++R+L P+ Y G HA+ ++ G + AL++MY+
Sbjct: 479 LESEVRIL---PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYS 535
Query: 153 KVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISG 212
+ GT++ + +F++M ++V +WN++++ ++R G+ + A+ ++ M
Sbjct: 536 QCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQD------------ 583
Query: 213 YSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV-EAYARKNGFF 271
E ++P+A T +++L AC++ G +E G + + +G
Sbjct: 584 -------------------EGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVI 624
Query: 272 KNLYVSNAVLEMYAKCGHIDVAWRVF----NEIGSLRNLCSWNSMIMGLAVHG--KCGKA 325
+N+ + ++++ + GH+D A + IGS ++ W ++ A HG K GK
Sbjct: 625 RNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDV--WWALFSACAAHGDLKLGK- 681
Query: 326 LELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGC 382
+ ++L E D +V L GM ++ +++ N+I ++ GC
Sbjct: 682 --MVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAI----NMIGAMKQRGC 732
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 31/178 (17%)
Query: 210 ISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNG 269
++G +++ + AL LF + + P+ +++ + +L G +V YA ++G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 270 FFKNLYVSNAVLEMYA-------------------------------KCGHIDVAWRVFN 298
+ +VSN +L +Y K G I+ A+ VF+
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 299 EIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGM 356
++ ++ WN+MI G G ++EL+ +M + G D F +L C +G +
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSL 205
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 197/423 (46%), Gaps = 37/423 (8%)
Query: 28 KQIHGYTLRTGID---QTKT-LIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
K IH Y ++ I+ +T T +I + A P +N L Q Y
Sbjct: 421 KSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQI 480
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
F +Y M+L G P+ G ++ IK GF +
Sbjct: 481 GDANKA-FDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHV 539
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
A AL++M+ K L A LFD+ ++
Sbjct: 540 AHALINMFTKCDALAAAIVLFDKCGFE------------------------------KST 569
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
VSW M++GY + Q E+A+ F +M+ E+ PNAVT +I+ A A L AL +G V +
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQMKVEK-FQPNAVTFVNIVRAAAELSALRVGMSVHS 628
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
+ GF V N++++MYAKCG I+ + + F EI + + + SWN+M+ A HG
Sbjct: 629 SLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISN-KYIVSWNTMLSAYAAHGLAS 687
Query: 324 KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCM 383
A+ L+ M PD V+F+ +L AC H G+VE+G+ IF+ M I ++EHY CM
Sbjct: 688 CAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACM 747
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
VDLLG+AG EA E+++ M +K +WG LL + H N+ L+ A L LEP NP
Sbjct: 748 VDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNP 807
Query: 444 GNY 446
+Y
Sbjct: 808 SHY 810
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 152/335 (45%), Gaps = 38/335 (11%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +H + ++ G DV AT+L+ MY+K G LE+A +LF + R+V +W+AM+A + +
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G D A+ LFR M +R+ I PNAVTL S
Sbjct: 379 AGQHDEAISLFRDM----------------------------MRIH----IKPNAVTLTS 406
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L CA + A +G+ + YA K L + AV+ MYAKCG A + F + ++
Sbjct: 407 VLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERL-PIK 465
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ ++N++ G G KA ++Y M G PD T VG+L C +G ++
Sbjct: 466 DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVY 525
Query: 365 -KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ +K F+ + H ++++ + L A + + +V W ++ HG
Sbjct: 526 GQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHG 583
Query: 424 NVELAEIAAESLFTLEPRNPGNYVILSNIYASADQ 458
E A +A +E P N V NI +A +
Sbjct: 584 QAEEA-VATFRQMKVEKFQP-NAVTFVNIVRAAAE 616
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 185/458 (40%), Gaps = 78/458 (17%)
Query: 29 QIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXX 88
Q+HG + +G+ LI ++ + + V L+N +++ Y
Sbjct: 23 QVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHRE 82
Query: 89 XC--FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATA 146
F S+ + G P++Y G +H + G DV+ TA
Sbjct: 83 ALGFFGYMSEEK--GIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTA 140
Query: 147 LLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV--- 203
L++MY K L AR++FD+M V++V TWN M++G A+ G AL LF M S V
Sbjct: 141 LVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDID 200
Query: 204 -VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI----- 257
VS +I SK ++ + L + + I + L + CA+L A E
Sbjct: 201 HVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEV 260
Query: 258 --------GQRVEAYARKNGFFK------------------------------------- 272
G + AYA NGFF+
Sbjct: 261 WRKDESSWGTMMAAYAH-NGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKG 319
Query: 273 --------------NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAV 318
++ V+ +++ MY+KCG +++A ++F I R++ SW++MI
Sbjct: 320 IAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED-RDVVSWSAMIASYEQ 378
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF-KSMKTDFNIIPKL 377
G+ +A+ L+ M+R P+ VT +L C G+ I ++K D I +L
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD--IESEL 436
Query: 378 EHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTL 415
E ++ + + G+ A + + +P+K D+V + L
Sbjct: 437 ETATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNAL 473
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 188/472 (39%), Gaps = 59/472 (12%)
Query: 30 IHGYTLRTG----IDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXX 85
IH Y ++ G + +L+ + L A+ + + + V ++ ++ +Y
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 86 XXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAAT 145
SL+ M + PN G+ +H + IK+ ++ AT
Sbjct: 382 HDEA-ISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETAT 440
Query: 146 ALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVS 205
A++ MYAK G RF AL+ F +P ++ V+
Sbjct: 441 AVISMYAKCG----------------------------RFSP---ALKAFERLPIKDAVA 469
Query: 206 WTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYA 265
+ + GY++ KA ++ M+ + P++ T+ +L CA G V
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLH-GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI 528
Query: 266 RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKA 325
K+GF +V++A++ M+ KC + A +F++ G ++ SWN M+ G +HG+ +A
Sbjct: 529 IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA 588
Query: 326 LELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVD 385
+ + QM E P+ VTFV ++ A + G + S+ + +VD
Sbjct: 589 VATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL-IQCGFCSQTPVGNSLVD 647
Query: 386 LLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPR--NP 443
+ + G + + + + K V W T+L A + HG LA A +++ P
Sbjct: 648 MYAKCGMIESSEKCFIEISNKY-IVSWNTMLSAYAAHG---LASCAVSLFLSMQENELKP 703
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVE 495
+ LS + SA + G+ + G EE G+ HK E
Sbjct: 704 DSVSFLSVL--SACRHAGLVE-------------EGKRIFEEMGERHKIEAE 740
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 27/293 (9%)
Query: 145 TALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV 204
T LL M + ++ + V + N ++ ++ F D + +F + VV
Sbjct: 6 TNLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVV 65
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
W +MI GY++ + +ALG F M E+ I P+ + L ACA + G R+
Sbjct: 66 LWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDL 125
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
+ G ++Y+ A++EMY K + A +VF+++ ++++ +WN+M+ GLA +G
Sbjct: 126 IAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKM-HVKDVVTWNTMVSGLAQNGCSSA 184
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLA-----------CTHGGMVEKGRHIFKSMKTDFNI 373
AL L+ M D V+ L+ A C HG +++KG IF
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG-FIFAFSSG---- 239
Query: 374 IPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE 426
++D+ L A V + + K +S WGT++ A + +G E
Sbjct: 240 ---------LIDMYCNCADLYAAESVFEEVWRKDESS-WGTMMAAYAHNGFFE 282
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 242/515 (46%), Gaps = 45/515 (8%)
Query: 27 VKQIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
VK+++G+ + G + + ++ ++L + + A+ + P ++ Y ++ +
Sbjct: 142 VKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVN 201
Query: 83 XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVF 142
F L+ M + G+ LH +K G + F
Sbjct: 202 FGNYVEA-FELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTF 260
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRN 202
+ L+DMY+K G +E AR F+ MP +
Sbjct: 261 VSCGLIDMYSKCGDIEDARCAFE-------------------------------CMPEKT 289
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
V+W +I+GY+ + E+AL L M + + + TL+ ++ L LE+ ++
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMR-DSGVSIDQFTLSIMIRISTKLAKLELTKQAH 348
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC 322
A +NGF + + A+++ Y+K G +D A VF+++ +N+ SWN+++ G A HG+
Sbjct: 349 ASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPR-KNIISWNALMGGYANHGRG 407
Query: 323 GKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGC 382
A++L+++M+ P+ VTF+ +L AC + G+ E+G IF SM I P+ HY C
Sbjct: 408 TDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYAC 467
Query: 383 MVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRN 442
M++LLGR G L EA I+ P+K +W LL AC N+EL + AE L+ + P
Sbjct: 468 MIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEK 527
Query: 443 PGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDR----S 498
GNYV++ N+Y S + A + + ++ ++ +++E G Q H F+ DR +
Sbjct: 528 LGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYN 587
Query: 499 HPKSNEIFALLDGVY-EMFKFNRSAFECHL--DLD 530
+I+ +D + E+ ++ S E HL D+D
Sbjct: 588 ETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVD 622
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 9/262 (3%)
Query: 3 LSGTTTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGI-DQTKT---LIEKLLEIPNLHYA 58
LS T F+ + ++ + KQ+H L+ G+ D T LI+ + ++ A
Sbjct: 219 LSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDA 278
Query: 59 QAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXX 118
+ P T +N ++ Y LY MR G S +Q+
Sbjct: 279 RCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLY-DMRDSGVSIDQFTLSIMIRISTK 337
Query: 119 XXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAM 178
+ HA I++GF ++ A TAL+D Y+K G ++ AR +FD++P + + +WNA+
Sbjct: 338 LAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNAL 397
Query: 179 MAGHARFGDVDGALELFRLMPSRNV----VSWTTMISGYSKNKQYEKALGLFLRMECEED 234
M G+A G A++LF M + NV V++ ++S + + E+ +FL M
Sbjct: 398 MGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHG 457
Query: 235 IMPNAVTLASILPACANLGALE 256
I P A+ A ++ G L+
Sbjct: 458 IKPRAMHYACMIELLGRDGLLD 479
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 3/229 (1%)
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQ 259
S++ V+ + I ++ +A LF +E T +++ AC L ++ +
Sbjct: 84 SKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVK 143
Query: 260 RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
RV + NGF Y+ N +L M+ KCG I A R+F+EI RNL S+ S+I G
Sbjct: 144 RVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPE-RNLYSYYSIISGFVNF 202
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G +A EL+ M E + + TF +L A G + G+ + ++
Sbjct: 203 GNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQL-HVCALKLGVVDNTFV 261
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
++D+ + G + +A + MP K +V W ++ + HG E A
Sbjct: 262 SCGLIDMYSKCGDIEDARCAFECMPEKT-TVAWNNVIAGYALHGYSEEA 309
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 234/482 (48%), Gaps = 43/482 (8%)
Query: 9 FKFSTLRNPNSKNIGMNQVKQIHGYTLRTGI--DQT--KTLIEKLLEIPNLHYAQAVLHH 64
F ++ L S++ ++ IHG + +G+ DQ +++ + + A +
Sbjct: 107 FTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCS 166
Query: 65 SPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXX 124
P+ + L+N ++ Y +L++ M+ GH PN Y
Sbjct: 167 IPDPDLALWNVMILGYGCCGFWDKG-INLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLV 225
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
+HA +K + AL++MY++
Sbjct: 226 AWSVHAFCLKINLDSHSYVGCALVNMYSRCMC---------------------------- 257
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLF--LRMECEEDIMPNAVTL 242
+ A +F + ++V+ +++I+GYS+ +++AL LF LRM ++ P+ V +
Sbjct: 258 ---IASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKK---PDCVLV 311
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
A +L +CA L G+ V +Y + G ++ V +A+++MY+KCG + A +F I
Sbjct: 312 AIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPE 371
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
+N+ S+NS+I+GL +HG A E + ++L G PD++TF LL C H G++ KG+
Sbjct: 372 -KNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQE 430
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
IF+ MK++F I P+ EHY MV L+G AGKL EA+E + ++ DS I G LL C H
Sbjct: 431 IFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVH 490
Query: 423 GNVELAEIAAESLF-TLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHS 481
N LAE+ AE++ E R V+LSN+YA +WD V +LR + S K G S
Sbjct: 491 ENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Query: 482 FL 483
+
Sbjct: 551 WF 552
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 124/329 (37%), Gaps = 68/329 (20%)
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
Q LH+ KS A D + AT L YA L AR+LFD
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFD-------------------- 64
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
+ P R+V W ++I Y+K Q+ L LF ++ D P+ T A +
Sbjct: 65 -----------VFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQI-LRSDTRPDNFTYACL 112
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
+ + + + A +G + +A+++ Y+K G I A ++F I +
Sbjct: 113 ARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPD-PD 171
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGL------------------ 347
L WN MI+G G K + L++ M G P+ T V L
Sbjct: 172 LALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHA 231
Query: 348 -----------LLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLG--RAGKLR 394
+ C M + I S + FN I + + C + G R G +
Sbjct: 232 FCLKINLDSHSYVGCALVNMYSRCMCI-ASACSVFNSISEPDLVACSSLITGYSRCGNHK 290
Query: 395 EAYEVIQTMPM---KPDSVIWGTLLGACS 420
EA + + M KPD V+ +LG+C+
Sbjct: 291 EALHLFAELRMSGKKPDCVLVAIVLGSCA 319
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 204/407 (50%), Gaps = 36/407 (8%)
Query: 97 MRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGT 156
+R+ P++Y G++LH K G+ VF T LL MY K
Sbjct: 393 LRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNRE 452
Query: 157 LELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKN 216
E A+++FD M R+V W M+ GH+R G+ + A++ F M KN
Sbjct: 453 AESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYRE-------------KN 499
Query: 217 KQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYV 276
+ + +L+S++ AC+++ L G+ A + GF + V
Sbjct: 500 RS-------------------DGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSV 540
Query: 277 SNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREG 336
A+++MY K G + A +F+ + S +L WNSM+ + HG KAL ++Q+L G
Sbjct: 541 CGALVDMYGKNGKYETAETIFS-LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENG 599
Query: 337 TTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREA 396
PD VT++ LL AC+H G +G+ ++ MK I +HY CMV+L+ +AG + EA
Sbjct: 600 FMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEA 658
Query: 397 YEVI-QTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYAS 455
E+I Q+ P + +W TLL AC N+++ AAE + L+P + +++LSN+YA
Sbjct: 659 LELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAV 718
Query: 456 ADQWDGVAKLRKVMKGSQITKSAGHSFLE-EGGQLHKFIVEDRSHPK 501
+W+ VA++R+ ++G +K G S++E F D+S+P+
Sbjct: 719 NGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 187/402 (46%), Gaps = 24/402 (5%)
Query: 125 GQMLHAHFIKSG------FAPDVFAATALLDMYAK---VGTLELARRLFDEM------PV 169
G LH+ IK G F P A++++++ K + L+ AR++ +
Sbjct: 69 GSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAA 128
Query: 170 REVP-TWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEK-ALGLFL 227
E P N +++ + R G ++ A ++F MP RNVVS+ + S YS+N + A L
Sbjct: 129 TESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTT 188
Query: 228 RMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKC 287
M E + PN+ T S++ CA L + +G + + K G+ N+ V +VL MY+ C
Sbjct: 189 HMAFEY-VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSC 247
Query: 288 GHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGL 347
G ++ A R+F+ + + R+ +WN+MI+G + K L + ML G P T+ +
Sbjct: 248 GDLESARRIFDCVNN-RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIV 306
Query: 348 LLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKP 407
L C+ G G+ I + + + L ++D+ G +REA+ V + P
Sbjct: 307 LNGCSKLGSYSLGKLIHARIIVS-DSLADLPLDNALLDMYCSCGDMREAFYVFGRIH-NP 364
Query: 408 DSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRK 467
+ V W +++ CS +G E A + L + P Y + I A+A+ V K
Sbjct: 365 NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHG--K 422
Query: 468 VMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALL 509
++ G Q+TK + G L ++R + ++F ++
Sbjct: 423 LLHG-QVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVM 463
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 168/413 (40%), Gaps = 43/413 (10%)
Query: 24 MNQVKQIHGYTLRTGIDQT-------KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKL 76
+ + +QIH L G LI + +L A+ V P+ V YN L
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNAL 169
Query: 77 LQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSG 136
AY F L + M PN G L++ IK G
Sbjct: 170 YSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLG 229
Query: 137 FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFR 196
++ +V T++L MY+ G LE ARR+FD + R+ WN M+ G + ++ L FR
Sbjct: 230 YSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFR 289
Query: 197 LMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALE 256
M ++SG + P T + +L C+ LG+
Sbjct: 290 NM----------LMSG----------------------VDPTQFTYSIVLNGCSKLGSYS 317
Query: 257 IGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGL 316
+G+ + A + +L + NA+L+MY CG + A+ VF I + NL SWNS+I G
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHN-PNLVSWNSIISGC 376
Query: 317 AVHGKCGKALELYDQMLREGT-TPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIP 375
+ +G +A+ +Y ++LR T PD+ TF + A G+ + T
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK-LLHGQVTKLGYER 435
Query: 376 KLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+ ++ + + + A +V M + D V+W ++ S GN ELA
Sbjct: 436 SVFVGTTLLSMYFKNREAESAQKVFDVMKER-DVVLWTEMIVGHSRLGNSELA 487
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 157/310 (50%), Gaps = 11/310 (3%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELAR----RLFDEMPVREVPTWNAMMA 180
G M + + SG P F + +L+ +K+G+ L + R+ + ++P NA++
Sbjct: 284 GLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLD 343
Query: 181 GHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAV 240
+ GD+ A +F + + N+VSW ++ISG S+N E+A+ ++ R+ P+
Sbjct: 344 MYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEY 403
Query: 241 TLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI 300
T ++ + A A G+ + K G+ ++++V +L MY K + A +VF ++
Sbjct: 404 TFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF-DV 462
Query: 301 GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKG 360
R++ W MI+G + G A++ + +M RE D + ++ AC+ M+ +G
Sbjct: 463 MKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG 522
Query: 361 RHIFK--SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
+F +++T F+ + + G +VD+ G+ GK E E I ++ PD W ++LGA
Sbjct: 523 -EVFHCLAIRTGFDCV--MSVCGALVDMYGKNGKY-ETAETIFSLASNPDLKCWNSMLGA 578
Query: 419 CSFHGNVELA 428
S HG VE A
Sbjct: 579 YSQHGMVEKA 588
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 197/340 (57%), Gaps = 12/340 (3%)
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
VD A + M ++VVS +TMISG + + ++A+ +F M PNA+T+ S+L
Sbjct: 379 VDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR----DTPNAITVISLLN 434
Query: 248 ACANLGALEIGQRVEAYA-RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
AC+ L + A R++ ++ V ++++ YAKCG I++A R F++I + +N+
Sbjct: 435 ACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQI-TEKNI 493
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
SW +I A++G KAL L+D+M ++G TP+ VT++ L AC HGG+V+KG IFKS
Sbjct: 494 ISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKS 553
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP--MKPDSVIWGTLLGAC--SFH 422
M + + P L+HY C+VD+L RAG++ A E+I+ +P +K + WG +L C F
Sbjct: 554 MVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFK 612
Query: 423 GNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSF 482
+ +E+ AE L LEP Y++ S+ +A+ W+ VA +R+++K ++ AG+S
Sbjct: 613 KLIITSEVVAEVL-ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSM 671
Query: 483 LEEGGQLHKFIVEDRSHPKSNEIFALLDGVYEMFKFNRSA 522
+ EG +F+ D+ +E+ ++ ++ K + +A
Sbjct: 672 VREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMKLDDTA 711
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 167/369 (45%), Gaps = 66/369 (17%)
Query: 94 YSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAK 153
+S++R+ G PN G+ +H + I+SGF ++L MYA
Sbjct: 115 FSKLRVWGFEPNT--STLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYAD 172
Query: 154 VGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGY 213
+L AR+LFDEM R+V+SW+ +I Y
Sbjct: 173 SDSLS-ARKLFDEMS-------------------------------ERDVISWSVVIRSY 200
Query: 214 SKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGF-FK 272
++K+ L LF M E P+ VT+ S+L AC + +++G+ V ++ + GF
Sbjct: 201 VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 273 NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQM 332
+++V N++++MY+K +D A+RVF+E + RN+ SWNS++ G + + +ALE++ M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDET-TCRNIVSWNSILAGFVHNQRYDEALEMFHLM 319
Query: 333 LREGTTPDDVTFVGLLLAC-----------THGGMVEKGRH----IFKSMKTDFNIIPKL 377
++E D+VT V LL C HG ++ +G S+ + +
Sbjct: 320 VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLV 379
Query: 378 EHYGCMVDL---------------LGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
+ G ++D L AG+ EA + M P+++ +LL ACS
Sbjct: 380 DDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVS 439
Query: 423 GNVELAEIA 431
++ ++ A
Sbjct: 440 ADLRTSKWA 448
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 139/330 (42%), Gaps = 42/330 (12%)
Query: 28 KQIHGYTLRTG---IDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
++IHGY +R+G I + I + + A+ + V ++ ++++Y
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERDVISWSVVIRSYVQSK 204
Query: 85 XXXXXCFSLYSQMRLLGHS-PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFA-PDVF 142
L+ +M + P+ G+ +H I+ GF DVF
Sbjct: 205 EPVVG-LKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRN 202
+L+DMY+K ++ A R+FDE R + +WN+++AG D ALE+F LM
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM---- 319
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
+E + + VT+ S+L C + +
Sbjct: 320 ----------------------------VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIH 351
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC 322
+ G+ N +++++ Y C +D A V + + + +++ S ++MI GLA G+
Sbjct: 352 GVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSM-TYKDVVSCSTMISGLAHAGRS 410
Query: 323 GKALELYDQMLREGTTPDDVTFVGLLLACT 352
+A+ ++ M TP+ +T + LL AC+
Sbjct: 411 DEAISIFCHM---RDTPNAITVISLLNACS 437
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 13/246 (5%)
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
N++ + + GD+ L F M SR+ VSW ++ G E+ L F ++
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV-WGF 123
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWR 295
PN TL ++ AC +L G+++ Y ++GF V N++L MYA + A +
Sbjct: 124 EPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARK 180
Query: 296 VFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTT-PDDVTFVGLLLACTHG 354
+F+E+ S R++ SW+ +I + L+L+ +M+ E T PD VT +L ACT
Sbjct: 181 LFDEM-SERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 239
Query: 355 GMVEKGRHIFK-SMKTDFNIIPKLEHYGC--MVDLLGRAGKLREAYEVIQTMPMKPDSVI 411
++ GR + S++ F++ + + C ++D+ + + A+ V + + V
Sbjct: 240 EDIDVGRSVHGFSIRRGFDL---ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVS 295
Query: 412 WGTLLG 417
W ++L
Sbjct: 296 WNSILA 301
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 199/400 (49%), Gaps = 17/400 (4%)
Query: 28 KQIHGYTLR----TGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
+QIHG ++ TGI LI+ + NL ++ + + + +N LL Y
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK 395
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
C SL+ QM +G P +Y Q LH+ ++ G+ + +
Sbjct: 396 DGPI--CLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYV 449
Query: 144 ATALLDMYAKVGTLELARRLFD--EMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
++L+ YAK + A L D P VP N + ++R G +++L +
Sbjct: 450 LSSLMRSYAKNQLMNDALLLLDWASGPTSVVPL-NIVAGIYSRRGQYHESVKLISTLEQP 508
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
+ VSW I+ S++ +E+ + LF M + +I P+ T SIL C+ L L +G +
Sbjct: 509 DTVSWNIAIAACSRSDYHEEVIELFKHM-LQSNIRPDKYTFVSILSLCSKLCDLTLGSSI 567
Query: 262 EAYARKNGF-FKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
K F + +V N +++MY KCG I +VF E +NL +W ++I L +HG
Sbjct: 568 HGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETRE-KNLITWTALISCLGIHG 626
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
+ALE + + L G PD V+F+ +L AC HGGMV++G +F+ MK D+ + P+++HY
Sbjct: 627 YGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDHY 685
Query: 381 GCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACS 420
C VDLL R G L+EA +I+ MP D+ +W T L C+
Sbjct: 686 RCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 138/321 (42%), Gaps = 40/321 (12%)
Query: 44 TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS 103
+L EKL E+ A V P +N +++ Y + ++S+MR G+
Sbjct: 57 SLYEKLGEVS---LAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKA-WGVFSEMRYFGYL 112
Query: 104 PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSG-FAPDVFAATALLDMYAKVGTLELARR 162
PNQ G LH +K G F D F T LL +Y ++ LE+A +
Sbjct: 113 PNQ--STVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 163 LFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKA 222
+F++MP + + TWN MM+ G + + FR + R S T
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELV-RMGASLTE-----------SSF 218
Query: 223 LGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLE 282
LG+ + C +D L+I +++ A K G + V N+++
Sbjct: 219 LGVLKGVSCVKD--------------------LDISKQLHCSATKKGLDCEISVVNSLIS 258
Query: 283 MYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDV 342
Y KCG+ +A R+F + GS ++ SWN++I A KAL+L+ M G +P+
Sbjct: 259 AYGKCGNTHMAERMFQDAGSW-DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQG 317
Query: 343 TFVGLLLACTHGGMVEKGRHI 363
T+V +L + ++ GR I
Sbjct: 318 TYVSVLGVSSLVQLLSCGRQI 338
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 167/429 (38%), Gaps = 78/429 (18%)
Query: 29 QIHGYTLRTGIDQTKTLIEKLL-----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
Q+HG +L+ G+ + L + L A+ V P ++ +N ++ +
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMM-SLLGH 192
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
C + ++ +G S + + LH K G ++
Sbjct: 193 RGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISV 252
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
+L+ Y K G +A R+F + ++ +WNA++ A+ + AL+LF MP
Sbjct: 253 VNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP---- 308
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
E PN T S+L + + L G+++
Sbjct: 309 ----------------------------EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCG 323
KNG + + NA+++ YAKCG+++ + F+ I +N+ WN+++ G A K G
Sbjct: 341 MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRD-KNIVCWNALLSGYA--NKDG 397
Query: 324 K-ALELYDQMLREGTTPDDVTFVGLLLACT-------HGGMVEKG----RHIFKSMKTDF 371
L L+ QML+ G P + TF L +C H +V G ++ S+ +
Sbjct: 398 PICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 372 --------------------NIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVI 411
+++P + + R G+ E+ ++I T+ +PD+V
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVP----LNIVAGIYSRRGQYHESVKLISTLE-QPDTVS 512
Query: 412 WGTLLGACS 420
W + ACS
Sbjct: 513 WNIAIAACS 521
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 167/434 (38%), Gaps = 80/434 (18%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLL----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
KQ+H + G+D +++ L+ + N H A+ + + + + +N ++ A
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICA-TAK 293
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
L+ M G SPNQ G+ +H IK+G +
Sbjct: 294 SENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVL 353
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
AL+D YAK G LE +R FD + + + WNA+++G+A
Sbjct: 354 GNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-------------------- 393
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
NK L LFL+M + P T ++ L +C E+ Q++ +
Sbjct: 394 ------------NKDGPICLSLFLQM-LQMGFRPTEYTFSTALKSCC---VTEL-QQLHS 436
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHID---------------VAWRVFNEIGSLR---- 304
+ G+ N YV ++++ YAK ++ V + I S R
Sbjct: 437 VIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYH 496
Query: 305 ------------NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
+ SWN I + + +EL+ ML+ PD TFV +L C+
Sbjct: 497 ESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCS 556
Query: 353 HGGMVEKGRHIFKSM-KTDFNIIPKLEHYGC--MVDLLGRAGKLREAYEVIQTMPMKPDS 409
+ G I + KTDF+ + + C ++D+ G+ G +R +V + K +
Sbjct: 557 KLCDLTLGSSIHGLITKTDFSCA---DTFVCNVLIDMYGKCGSIRSVMKVFEETREK-NL 612
Query: 410 VIWGTLLGACSFHG 423
+ W L+ HG
Sbjct: 613 ITWTALISCLGIHG 626
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 141/318 (44%), Gaps = 57/318 (17%)
Query: 141 VFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPS 200
V+ ++ +Y K+G + LA ++FD+MP R ++N ++ G++++GDVD
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVD----------- 97
Query: 201 RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR 260
KA G+F M +PN T++ +L +CA+L + G +
Sbjct: 98 --------------------KAWGVFSEMR-YFGYLPNQSTVSGLL-SCASLD-VRAGTQ 134
Query: 261 VEAYARKNGFF-KNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVH 319
+ + K G F + +V +L +Y + +++A +VF ++ ++L +WN M+ L
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM-PFKSLETWNHMMSLLGHR 193
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLL--LACTHGGMVEKGRHIF---KSMKTDFNII 374
G + + + +++R G + + +F+G+L ++C + K H K + + +++
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAES 434
L + G+ G A + Q D V W ++ A + N + A
Sbjct: 254 NSL------ISAYGKCGNTHMAERMFQDAG-SWDIVSWNAIICATAKSEN----PLKALK 302
Query: 435 LFTLEPR-----NPGNYV 447
LF P N G YV
Sbjct: 303 LFVSMPEHGFSPNQGTYV 320
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 270 FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELY 329
+ +YV N ++ +Y K G + +A +VF+++ RN S+N++I G + +G KA ++
Sbjct: 45 LLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE-RNKVSFNTIIKGYSKYGDVDKAWGVF 103
Query: 330 DQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYG-CMVDLLG 388
+M G P+ T GLL + V G + + + + G C++ L G
Sbjct: 104 SEMRYFGYLPNQSTVSGLLSCASLD--VRAGTQL-HGLSLKYGLFMADAFVGTCLLCLYG 160
Query: 389 RAGKLREAYEVIQTMPMK 406
R L A +V + MP K
Sbjct: 161 RLDLLEMAEQVFEDMPFK 178
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 199/365 (54%), Gaps = 19/365 (5%)
Query: 132 FIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPV-----REVPTWNAMMAGHARFG 186
+ G PD F +LL V LE+ L + + R +++ + + G
Sbjct: 205 MLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG-LAIKLGFGRSSALIRSLVNAYVKCG 263
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSK-NKQYEKALGLF---LRMECEEDIMPNAVTL 242
+ A +L R+++S T +I+G+S+ N A +F +RM+ + D V +
Sbjct: 264 SLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMD----EVVV 319
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFK-NLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
+S+L C + ++ IG+++ +A K+ + ++ + N++++MYAK G I+ A F E+
Sbjct: 320 SSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK 379
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
+++ SW S+I G HG KA++LY++M E P+DVTF+ LL AC+H G E G
Sbjct: 380 E-KDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGW 438
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP--MKPDSVIWGTLLGAC 419
I+ +M I + EH C++D+L R+G L EAY +I++ + S WG L AC
Sbjct: 439 KIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDAC 498
Query: 420 SFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGS-QITKSA 478
HGNV+L+++AA L ++EPR P NY+ L+++YA+ WD RK+MK S K+
Sbjct: 499 RRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAP 558
Query: 479 GHSFL 483
G+S +
Sbjct: 559 GYSLV 563
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 33/224 (14%)
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFG 186
++H + I +GF ++ L+D+Y K G
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQG------------------------------- 61
Query: 187 DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
DV A +LF + R+VVSWT MIS +S+ + AL LF M ED+ N T S+L
Sbjct: 62 DVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH-REDVKANQFTYGSVL 120
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
+C +LG L+ G ++ K NL V +A+L +YA+CG ++ A F+ + R+L
Sbjct: 121 KSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE-RDL 179
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA 350
SWN+MI G + + L+ ML EG PD TF LL A
Sbjct: 180 VSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 165/412 (40%), Gaps = 48/412 (11%)
Query: 26 QVKQIHGYTLRTG----IDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYX 81
Q+ IHG ++ G + LI+ L+ ++ +A+ + V + ++ +
Sbjct: 30 QLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFS 89
Query: 82 XXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV 141
L+ +M NQ+ G +H K A ++
Sbjct: 90 RCGYHPDALL-LFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNL 148
Query: 142 FAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
+ALL +YA+ G +E AR FD M R
Sbjct: 149 IVRSALLSLYARCGKMEEARLQFDS-------------------------------MKER 177
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
++VSW MI GY+ N + + LF M E P+ T S+L A + LEI +
Sbjct: 178 DLVSWNAMIDGYTANACADTSFSLFQLM-LTEGKKPDCFTFGSLLRASIVVKCLEIVSEL 236
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
A K GF ++ + +++ Y KCG + AW++ +E R+L S ++I G +
Sbjct: 237 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL-HEGTKKRDLLSCTALITGFSQQNN 295
Query: 322 C-GKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI----FKSMKTDFNIIPK 376
C A +++ M+R T D+V +L CT V GR I KS + F++
Sbjct: 296 CTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALG 355
Query: 377 LEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
++D+ ++G++ +A + M K D W +L+ HGN E A
Sbjct: 356 ----NSLIDMYAKSGEIEDAVLAFEEMKEK-DVRSWTSLIAGYGRHGNFEKA 402
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 211/455 (46%), Gaps = 41/455 (9%)
Query: 9 FKFSTLRNPNSKNIGMNQVKQIHGYTLRTGI----DQTKTLIEKLLEIPNLHYAQAVLHH 64
F F T S+ + ++ + +HG LR+G D LI + A+ V
Sbjct: 126 FSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDE 185
Query: 65 SPNST-VFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXX 123
P S ++ L+ Y L+ MR N
Sbjct: 186 MPQSVDAVTFSTLMNGYLQVSKKALA-LDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLS 244
Query: 124 XGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHA 183
+ H IK G D+ TAL+ MY K G + ARR+FD +R
Sbjct: 245 GAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFD-CAIR------------- 290
Query: 184 RFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
++VV+W MI Y+K E+ + L +M+ E+ + PN+ T
Sbjct: 291 -----------------KDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEK-MKPNSSTFV 332
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
+L +CA A +G+ V + + + A+++MYAK G ++ A +FN +
Sbjct: 333 GLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKD- 391
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREG--TTPDDVTFVGLLLACTHGGMVEKGR 361
+++ SW +MI G HG +A+ L+++M E P+++TF+ +L AC+HGG+V +G
Sbjct: 392 KDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGI 451
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSF 421
FK M ++ PK+EHYGC+VDLLGRAG+L EAYE+I+ +P+ DS W LL AC
Sbjct: 452 RCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRV 511
Query: 422 HGNVELAEIAAESLFTLEPRNPGNYVILSNIYASA 456
+GN +L E L + +P + ++L+ +A A
Sbjct: 512 YGNADLGESVMMRLAEMGETHPADAILLAGTHAVA 546
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 26 QVKQIHGYTLRTGIDQTKTLIEKLL---EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
+V +IHGY ++TG+D+ + KLL + ++ YA ++ H N+ +F++N +++ Y
Sbjct: 43 EVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSI 102
Query: 83 XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVF 142
FS+++Q+R G + +++ G+ LH ++SGF
Sbjct: 103 SDEPERA-FSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTD 161
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVR-EVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
AL+ Y G + AR++FDEMP + T++ +M G+ + AL+LFR+M
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS 221
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
VV N TL S L A ++LG L +
Sbjct: 222 EVV--------------------------------VNVSTLLSFLSAISDLGDLSGAESA 249
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK 321
K G +L++ A++ MY K G I A R+F+ +++ +WN MI A G
Sbjct: 250 HVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFD-CAIRKDVVTWNCMIDQYAKTGL 308
Query: 322 CGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYG 381
+ + L QM E P+ TFVGLL +C + GR + ++ + + +
Sbjct: 309 LEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTA 368
Query: 382 CMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG----NVELAEIAAESLFT 437
+VD+ + G L +A E+ M K D W ++ HG V L E
Sbjct: 369 -LVDMYAKVGLLEKAVEIFNRMKDK-DVKSWTAMISGYGAHGLAREAVTLFNKMEEENCK 426
Query: 438 LEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGH-----SFLEEGGQLHKF 492
+ P V+L+ +G+ +++++ T H L GQL +
Sbjct: 427 VRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEA 486
Query: 493 IVEDRSHPKSNE 504
R+ P +++
Sbjct: 487 YELIRNLPITSD 498
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 192/384 (50%), Gaps = 32/384 (8%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
+ +H IK G A + TALLDM + + A +FD+ P
Sbjct: 436 SEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP---------------- 479
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
++D + + T++I GY++N +KA+ LF R CE+ + + V+L
Sbjct: 480 -SNLDSS------------KATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTL 526
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
IL C LG E+G ++ YA K G+F ++ + N+++ MYAKC D A ++FN +
Sbjct: 527 ILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMRE-H 585
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLAC--THGGMVEKGRH 362
++ SWNS+I + +AL L+ +M + PD +T ++ A T + R
Sbjct: 586 DVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRD 645
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
+F SMKT ++I P EHY V +LG G L EA + I +MP++P+ + LL +C H
Sbjct: 646 LFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIH 705
Query: 423 GNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSF 482
N +A+ A+ + + +P P Y++ SNIY+++ W +R+ M+ K S+
Sbjct: 706 SNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSW 765
Query: 483 LEEGGQLHKFIVEDRSHPKSNEIF 506
+ ++H F D SHP+ +I+
Sbjct: 766 IIHENKIHSFHARDTSHPQEKDIY 789
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 130/256 (50%), Gaps = 6/256 (2%)
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
NA+++ + + G A+ +F + S VVS+T +ISG+S+ +AL +F RM +
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAK--CGHIDVA 293
PN T +IL AC + +G ++ K+GF +++VSN+++ +Y K D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 294 WRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLR-EGTTPDDVTFVGLLLACT 352
++F+EI R++ SWN+++ L GK KA +L+ +M R EG D T LL +CT
Sbjct: 238 LKLFDEIPQ-RDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT 296
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIW 412
++ +GR + ++ +L ++ + +++ E + M M D+V +
Sbjct: 297 DSSVLLRGREL-HGRAIRIGLMQELSVNNALIGFYSKFWDMKKV-ESLYEMMMAQDAVTF 354
Query: 413 GTLLGACSFHGNVELA 428
++ A G V+ A
Sbjct: 355 TEMITAYMSFGMVDSA 370
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 150/331 (45%), Gaps = 8/331 (2%)
Query: 91 FSLYSQM-RLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLD 149
F L+ +M R+ G + + G+ LH I+ G ++ AL+
Sbjct: 269 FDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIG 328
Query: 150 MYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTM 209
Y+K ++ L++ M ++ T+ M+ + FG VD A+E+F + +N +++ +
Sbjct: 329 FYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNAL 388
Query: 210 ISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNG 269
++G+ +N KAL LF M + + +L S + AC + ++ +++ + K G
Sbjct: 389 MAGFCRNGHGLKALKLFTDM-LQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFG 447
Query: 270 FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS-LRNLCSWNSMIMGLAVHGKCGKALEL 328
N + A+L+M +C + A +F++ S L + + S+I G A +G KA+ L
Sbjct: 448 TAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSL 507
Query: 329 YDQMLREGTT-PDDVTFVGLLLACTHGGMVEKGRHIF-KSMKTDFNIIPKLEHYGCMVDL 386
+ + L E D+V+ +L C G E G I ++K + + ++ +
Sbjct: 508 FHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY--FSDISLGNSLISM 565
Query: 387 LGRAGKLREAYEVIQTMPMKPDSVIWGTLLG 417
+ +A ++ TM + D + W +L+
Sbjct: 566 YAKCCDSDDAIKIFNTM-REHDVISWNSLIS 595
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 163/422 (38%), Gaps = 77/422 (18%)
Query: 28 KQIHGYTLRTGIDQTK---TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXX 84
K +H L+ ++T+ LI L++ A V + TV Y L+ +
Sbjct: 100 KAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLN 159
Query: 85 XXXXXCFSLYSQMRLLGH-SPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
++ +MR G PN+Y G +H +KSGF VF
Sbjct: 160 LEIEA-LKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 144 ATALLDMYAKV--GTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
+ +L+ +Y K + + +LFDE+P R+V +WN
Sbjct: 219 SNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWN------------------------- 253
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
T++S K + KA LF M E ++ TL+++L +C + L G+ +
Sbjct: 254 ------TVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGREL 307
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAK-------------------------------CGHI 290
A + G + L V+NA++ Y+K G +
Sbjct: 308 HGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMV 367
Query: 291 DVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA 350
D A +F + +N ++N+++ G +G KAL+L+ ML+ G D + + A
Sbjct: 368 DSAVEIFANVTE-KNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDA 426
Query: 351 C---THGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKP 407
C + + E+ T FN P ++ ++D+ R ++ +A E+ P
Sbjct: 427 CGLVSEKKVSEQIHGFCIKFGTAFN--PCIQ--TALLDMCTRCERMADAEEMFDQWPSNL 482
Query: 408 DS 409
DS
Sbjct: 483 DS 484
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 178/345 (51%), Gaps = 9/345 (2%)
Query: 44 TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHS 103
+I ++ +L A+ P +V +N +L Y L++ M LG
Sbjct: 203 VMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTED-ALRLFNDMLRLGVR 261
Query: 104 PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRL 163
PN+ + L + + F TALLDM+AK ++ ARR+
Sbjct: 262 PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 164 FDEMPV-REVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKA 222
F+E+ R + TWNAM++G+ R GD+ A +LF MP RNVVSW ++I+GY+ N Q A
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 223 LGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLE 282
+ F M D P+ VT+ S+L AC ++ LE+G + Y RKN N +++
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIF 441
Query: 283 MYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDV 342
MYA+ G++ A RVF+E+ R++ S+N++ A +G + L L +M EG PD V
Sbjct: 442 MYARGGNLWEAKRVFDEMKE-RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 343 TFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLL 387
T+ +L AC G++++G+ IFKS++ P +HY CM DLL
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 183/432 (42%), Gaps = 72/432 (16%)
Query: 56 HYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXX 115
+Y + + VF+ N + + Y LY Q G P+ +
Sbjct: 57 YYTRLIFDSVTFPNVFVVNSMFK-YFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS 115
Query: 116 XXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTW 175
G + A K GF D + ++DMY K ++E AR++FD++ R+ W
Sbjct: 116 AGRF-----GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDW 170
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTT--------------------------- 208
N M++G+ ++G+ + A +LF +MP +VVSWT
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV 230
Query: 209 ----MISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
M+SGY++N E AL LF M + PN T ++ AC+ + + +
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDM-LRLGVRPNETTWVIVISACSFRADPSLTRSLVKL 289
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL------------------ 306
+ N +V A+L+M+AKC I A R+FNE+G+ RNL
Sbjct: 290 IDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSS 349
Query: 307 -------------CSWNSMIMGLAVHGKCGKALELYDQMLREG-TTPDDVTFVGLLLACT 352
SWNS+I G A +G+ A+E ++ M+ G + PD+VT + +L AC
Sbjct: 350 ARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACG 409
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIW 412
H +E G I ++ + I Y ++ + R G L EA V M + D V +
Sbjct: 410 HMADLELGDCIVDYIRKN-QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER-DVVSY 467
Query: 413 GTLLGACSFHGN 424
TL A + +G+
Sbjct: 468 NTLFTAFAANGD 479
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 21/232 (9%)
Query: 202 NVVSWTTMISGYSKNKQYEKALGLF-LRMECEEDIMPNAVTLASILPACANLGALEIGQR 260
NV +M +SK L L+ R C IMP+A + ++ + G L
Sbjct: 70 NVFVVNSMFKYFSKMDMANDVLRLYEQRSRC--GIMPDAFSFPVVIKSAGRFGIL----- 122
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG 320
+A K GFFK+ YV N +++MY K ++ A +VF++I S R WN MI G G
Sbjct: 123 FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQI-SQRKGSDWNVMISGYWKWG 181
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
+A +L+D M D V++ ++ +E R F M + +
Sbjct: 182 NKEEACKLFDMM----PENDVVSWTVMITGFAKVKDLENARKYFDRMPE-----KSVVSW 232
Query: 381 GCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGTLLGACSFHGNVELAE 429
M+ + G +A + M ++P+ W ++ ACSF + L
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTR 284
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 177/316 (56%), Gaps = 4/316 (1%)
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
N+++ ++R D+ A +F+ + + ++ +W ++ISG++ N++ E+ L+
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET-SFLLKEMLLSGF 419
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYA-RKNGFFKNLYVSNAVLEMYAKCGHIDVAW 294
PN +TLASILP A +G L+ G+ Y R+ + L + N++++MYAK G I A
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 295 RVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
RVF+ + R+ ++ S+I G GK AL + M R G PD VT V +L AC+H
Sbjct: 480 RVFDSMRK-RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 355 GMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGT 414
+V +G +F M+ F I +LEHY CMVDL RAG L +A ++ T+P +P S + T
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 415 LLGACSFHGNVELAEIAAES-LFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQ 473
LL AC HGN + E AA+ L +P + G+Y++L+++YA W + ++ ++
Sbjct: 599 LLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLG 658
Query: 474 ITKSAGHSFLEEGGQL 489
+ K+ + +E +L
Sbjct: 659 VQKAHEFALMETDSEL 674
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 199/438 (45%), Gaps = 17/438 (3%)
Query: 4 SGTTTFKFSTLRNPNSKNIGMNQV---KQIHGYTLRTGIDQTKTLIEKLLEIPN----LH 56
SG+ F + + S +G N+ +Q+H + + +G++ L+ KL+ + L
Sbjct: 76 SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLD 135
Query: 57 YAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXX 116
AQ + +S +N L+ +Y S+Y +M G +++
Sbjct: 136 EAQTITENSEILHPLPWNVLIGSYIRNKRFQES-VSVYKRMMSKGIRADEFTYPSVIKAC 194
Query: 117 XXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWN 176
G+++H S +++ AL+ MY + G +++ARRLFD M R+ +WN
Sbjct: 195 AALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWN 254
Query: 177 AMMAGHARFGDVDGALELFRLM----PSRNVVSWTTMISGYSKNKQYEKALGLFLRMECE 232
A++ + + A +L M ++V+W T+ G + Y AL + M
Sbjct: 255 AIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR-N 313
Query: 233 EDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLY--VSNAVLEMYAKCGHI 290
++ +V + + L AC+++GAL+ G+ ++ F + V N+++ MY++C +
Sbjct: 314 CNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL 373
Query: 291 DVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA 350
A+ VF ++ + +L +WNS+I G A + + + L +ML G P+ +T +L
Sbjct: 374 RHAFIVFQQVEA-NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL 432
Query: 351 CTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSV 410
G ++ G+ + + L + +VD+ ++G++ A V +M K D V
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM-RKRDKV 491
Query: 411 IWGTLLGACSFHGNVELA 428
+ +L+ G E+A
Sbjct: 492 TYTSLIDGYGRLGKGEVA 509
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 122/322 (37%), Gaps = 37/322 (11%)
Query: 30 IHGYTLRTGIDQTK-TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXX 88
I + ID + +LI +L +A V +++ +N ++ +
Sbjct: 347 IRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 89 XCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAA-TAL 147
F L +M L G PN G+ H + ++ D +L
Sbjct: 407 TSF-LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 148 LDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWT 207
+DMYAK G + A+R+FD M R+ T+ +++ G+ R G + AL F+ M
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMD-------- 517
Query: 208 TMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV-EAYAR 266
I P+ VT+ ++L AC++ + G +
Sbjct: 518 ------------------------RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEH 553
Query: 267 KNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKAL 326
G L + ++++Y + G++D A +F+ I + +++ +HG
Sbjct: 554 VFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGE 613
Query: 327 ELYDQMLREGTTPDDVTFVGLL 348
D++L E T P+ + LL
Sbjct: 614 WAADKLLLE-TKPEHLGHYMLL 634
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 177/316 (56%), Gaps = 4/316 (1%)
Query: 176 NAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
N+++ ++R D+ A +F+ + + ++ +W ++ISG++ N++ E+ L+
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET-SFLLKEMLLSGF 419
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYA-RKNGFFKNLYVSNAVLEMYAKCGHIDVAW 294
PN +TLASILP A +G L+ G+ Y R+ + L + N++++MYAK G I A
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 295 RVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
RVF+ + R+ ++ S+I G GK AL + M R G PD VT V +L AC+H
Sbjct: 480 RVFDSMRK-RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 355 GMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGT 414
+V +G +F M+ F I +LEHY CMVDL RAG L +A ++ T+P +P S + T
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 415 LLGACSFHGNVELAEIAAES-LFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQ 473
LL AC HGN + E AA+ L +P + G+Y++L+++YA W + ++ ++
Sbjct: 599 LLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLG 658
Query: 474 ITKSAGHSFLEEGGQL 489
+ K+ + +E +L
Sbjct: 659 VQKAHEFALMETDSEL 674
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 199/438 (45%), Gaps = 17/438 (3%)
Query: 4 SGTTTFKFSTLRNPNSKNIGMNQV---KQIHGYTLRTGIDQTKTLIEKLLEIPN----LH 56
SG+ F + + S +G N+ +Q+H + + +G++ L+ KL+ + L
Sbjct: 76 SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLD 135
Query: 57 YAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXX 116
AQ + +S +N L+ +Y S+Y +M G +++
Sbjct: 136 EAQTITENSEILHPLPWNVLIGSYIRNKRFQES-VSVYKRMMSKGIRADEFTYPSVIKAC 194
Query: 117 XXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWN 176
G+++H S +++ AL+ MY + G +++ARRLFD M R+ +WN
Sbjct: 195 AALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWN 254
Query: 177 AMMAGHARFGDVDGALELFRLM----PSRNVVSWTTMISGYSKNKQYEKALGLFLRMECE 232
A++ + + A +L M ++V+W T+ G + Y AL + M
Sbjct: 255 AIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR-N 313
Query: 233 EDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLY--VSNAVLEMYAKCGHI 290
++ +V + + L AC+++GAL+ G+ ++ F + V N+++ MY++C +
Sbjct: 314 CNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL 373
Query: 291 DVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA 350
A+ VF ++ + +L +WNS+I G A + + + L +ML G P+ +T +L
Sbjct: 374 RHAFIVFQQVEA-NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL 432
Query: 351 CTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSV 410
G ++ G+ + + L + +VD+ ++G++ A V +M K D V
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM-RKRDKV 491
Query: 411 IWGTLLGACSFHGNVELA 428
+ +L+ G E+A
Sbjct: 492 TYTSLIDGYGRLGKGEVA 509
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 122/322 (37%), Gaps = 37/322 (11%)
Query: 30 IHGYTLRTGIDQTK-TLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXX 88
I + ID + +LI +L +A V +++ +N ++ +
Sbjct: 347 IRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 89 XCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAA-TAL 147
F L +M L G PN G+ H + ++ D +L
Sbjct: 407 TSF-LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 148 LDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWT 207
+DMYAK G + A+R+FD M R+ T+ +++ G+ R G + AL F+ M
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMD-------- 517
Query: 208 TMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV-EAYAR 266
I P+ VT+ ++L AC++ + G +
Sbjct: 518 ------------------------RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEH 553
Query: 267 KNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKAL 326
G L + ++++Y + G++D A +F+ I + +++ +HG
Sbjct: 554 VFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGE 613
Query: 327 ELYDQMLREGTTPDDVTFVGLL 348
D++L E T P+ + LL
Sbjct: 614 WAADKLLLE-TKPEHLGHYMLL 634
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 178/317 (56%), Gaps = 17/317 (5%)
Query: 176 NAMMAGHARFGDVDGALELFR-LMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEED 234
AM++ ++ G ++ A++++ L + V ++ISG +N+ Y++A L R
Sbjct: 223 TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR---- 278
Query: 235 IMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAW 294
PN L+S L C++ L IG+++ A +NGF + + N +++MY KCG I A
Sbjct: 279 --PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336
Query: 295 RVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGT--TPDDVTFVGLLLACT 352
+F I S +++ SW SMI AV+G KALE++ +M EG+ P+ VTF+ ++ AC
Sbjct: 337 TIFRAIPS-KSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACA 395
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDS--- 409
H G+V++G+ F MK + ++P EHY C +D+L +AG+ E + +++ M M+ D+
Sbjct: 396 HAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM-MENDNQSI 454
Query: 410 --VIWGTLLGACSFHGNVELAEIAAESLF-TLEPRNPGNYVILSNIYASADQWDGVAKLR 466
IW +L ACS + ++ E A L P N YV++SN YA+ +WD V +LR
Sbjct: 455 PCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELR 514
Query: 467 KVMKGSQITKSAGHSFL 483
+K + K+AGHS
Sbjct: 515 GKLKNKGLVKTAGHSLF 531
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 45/312 (14%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +HA IK G + TAL+DMY+K G L + R+F+ +
Sbjct: 103 GRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVE---------------- 146
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
+++VSW ++SG+ +N + ++ALG+F M E + + TL+S
Sbjct: 147 ---------------EKDLVSWNALLSGFLRNGKGKEALGVFAAMY-RERVEISEFTLSS 190
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYV-SNAVLEMYAKCGHIDVAWRVFNEIGSL 303
++ CA+L L+ G++V A G ++L V A++ Y+ G I+ A +V+N +
Sbjct: 191 VVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVH 248
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
+ NS+I G + +A +L P+ L C+ + G+ I
Sbjct: 249 TDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQI 303
Query: 364 F-KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
+++ F KL ++D+ G+ G++ +A + + +P K V W +++ A + +
Sbjct: 304 HCVALRNGFVSDSKL--CNGLMDMYGKCGQIVQARTIFRAIPSK-SVVSWTSMIDAYAVN 360
Query: 423 GN-VELAEIAAE 433
G+ V+ EI E
Sbjct: 361 GDGVKALEIFRE 372
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 17/273 (6%)
Query: 194 LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRM-ECEEDIMPNAVTLASILPACANL 252
LF +P R++ S + +S + ++ L LFL++ D+ + T +L AC+ L
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSH--TFTPVLGACSLL 97
Query: 253 GALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSM 312
E G++V A K G A+++MY+K GH+ + RVF + ++L SWN++
Sbjct: 98 SYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEE-KDLVSWNAL 156
Query: 313 IMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFN 372
+ G +GK +AL ++ M RE + T ++ C ++++G+ + +
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 373 IIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAA 432
+ L M+ G + EA +V ++ + D V+ +L+ C + N + A
Sbjct: 217 DLVVLGT--AMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA---- 270
Query: 433 ESLFTLEPRNPGNYVILSNIYA----SADQWDG 461
F L R N +LS+ A ++D W G
Sbjct: 271 ---FLLMSRQRPNVRVLSSSLAGCSDNSDLWIG 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 43/183 (23%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H +++GF D L+DMY K G + AR +F +P + V +W +M+ +A
Sbjct: 300 GKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAV 359
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEE--DIMPNAVTL 242
GD ALE+FR M CEE ++PN+VT
Sbjct: 360 NGDGVKALEIFREM--------------------------------CEEGSGVLPNSVTF 387
Query: 243 ASILPACANLGALEIGQRV-----EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
++ ACA+ G ++ G+ E Y G YV +++ +K G + WR+
Sbjct: 388 LVVISACAHAGLVKEGKECFGMMKEKYRLVPG--TEHYV--CFIDILSKAGETEEIWRLV 443
Query: 298 NEI 300
+
Sbjct: 444 ERM 446
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 231/497 (46%), Gaps = 43/497 (8%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
+Q+HGY + G L L+ +L A V P+ V +N L+ Y
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAP-DVF 142
L+ ++ PN++ G +H+ +K G +V
Sbjct: 135 GRFQEG-ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVV 193
Query: 143 AATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR------------------ 184
L+DMY K G ++ A +F M ++ +WNA++A +R
Sbjct: 194 VGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPD 253
Query: 185 -------------FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMEC 231
GD + A ++ MP+ N SW T+++GY +++ +A F +M
Sbjct: 254 TVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH- 312
Query: 232 EEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHID 291
+ + +L+ +L A A L + G + A A K G + V++A+++MY+KCG +
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLK 372
Query: 292 VAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREG-TTPDDVTFVGLLLA 350
A +F + +NL WN MI G A +G +A++L++Q+ +E PD TF+ LL
Sbjct: 373 HAELMFWTMPR-KNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAV 431
Query: 351 CTHGGM-VEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDS 409
C+H + +E F+ M ++ I P +EH ++ +G+ G++ +A +VIQ D
Sbjct: 432 CSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDG 491
Query: 410 VIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGN--YVILSNIYASADQWDGVAKLRK 467
V W LLGACS +++ A+ A + L + Y+++SN+YA ++W V ++RK
Sbjct: 492 VAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRK 551
Query: 468 VMKGSQITKSAGHSFLE 484
+M+ S + K G S+++
Sbjct: 552 IMRESGVLKEVGSSWID 568
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 48/290 (16%)
Query: 132 FIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAGHARFGD 187
I G PD LL + G + L R+L + V N++M +
Sbjct: 46 LINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDS 105
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
++ A ++F MP +V+SW +++SGY ++ ++++ + LFL + D+ PN + + L
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELH-RSDVFPNEFSFTAALA 164
Query: 248 ACANLGALEIGQRVEAYARKNGFFK-NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
ACA L +G + + K G K N+ V N +++MY KCG +D A VF + ++
Sbjct: 165 ACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEE-KDT 223
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
SWN+++ + +GK L + QM PD VT
Sbjct: 224 VSWNAIVASCSRNGKLELGLWFFHQM----PNPDTVT----------------------- 256
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
Y ++D ++G A++V+ MP P+S W T+L
Sbjct: 257 -------------YNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTIL 292
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 237 PNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRV 296
P+A L +L N G + + +++ Y K+GF N +SN+++ Y ++ A +V
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112
Query: 297 FNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGM 356
F+E+ ++ SWNS++ G G+ + + L+ ++ R P++ +F L AC +
Sbjct: 113 FDEMPD-PDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHL 171
Query: 357 VEKGRHIFKSMKT----DFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIW 412
G I + N++ C++D+ G+ G + +A V Q M K D+V W
Sbjct: 172 SPLGACIHSKLVKLGLEKGNVVVG----NCLIDMYGKCGFMDDAVLVFQHMEEK-DTVSW 226
Query: 413 GTLLGACSFHGNVELA 428
++ +CS +G +EL
Sbjct: 227 NAIVASCSRNGKLELG 242
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 234/510 (45%), Gaps = 44/510 (8%)
Query: 7 TTFKFSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTK-----TLIEKLLEIPNLHYAQAV 61
T F FS L S + +QIHG + +G+ + ++++ + YA +V
Sbjct: 135 TEFTFSILA---SLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSV 191
Query: 62 LHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXX 121
+ V +N L+ + + MR + P++Y
Sbjct: 192 FLTMEDRDVVSWNCLILS-CSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRE 250
Query: 122 XXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAG 181
G+ A IK GF + A +DM++K L+ + +LF RE+ W++++
Sbjct: 251 LSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLF-----RELEKWDSVLCN 305
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+MI YS + E AL LF+ + + + P+ T
Sbjct: 306 --------------------------SMIGSYSWHCCGEDALRLFI-LAMTQSVRPDKFT 338
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
+S+L + N L+ G V + K GF + V+ +++EMY K G +D+A VF +
Sbjct: 339 FSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTD 397
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQML-REGTTPDDVTFVGLLLACTHGGMVEKG 360
++L WN++IMGLA + + ++L +++Q+L + PD VT +G+L+AC + G V +G
Sbjct: 398 G-KDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEG 456
Query: 361 RHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACS 420
IF SM+ + P EHY C+++LL R G + EA ++ +P +P S IW +L A
Sbjct: 457 IQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASL 516
Query: 421 FHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGH 480
G+ LAE A+++ EP++ Y++L IY +W+ KLR M ++ + G
Sbjct: 517 DLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGS 576
Query: 481 SFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
S + + F + ++ ALLD
Sbjct: 577 SKISIESSVFSFEADQLQIHGGHDTCALLD 606
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 152/299 (50%), Gaps = 8/299 (2%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
+++HA +++GF + L +Y K G++ A +LFD++P + TWN + G +
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G ++ AL+LF MP R+VVSW TMISG +E + +F M+ +I P T S
Sbjct: 83 NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQ-RWEIRPTEFTF-S 140
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFK-NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL 303
IL + + G+++ A +G + NL V N+V++MY + G D A VF +
Sbjct: 141 ILASLVT--CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMED- 197
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
R++ SWN +I+ + G AL+ + M PD+ T ++ C+ + KG+
Sbjct: 198 RDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQA 257
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFH 422
++ + G +D+ + +L ++ ++ + + K DSV+ +++G+ S+H
Sbjct: 258 L-ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWH 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 115/270 (42%), Gaps = 46/270 (17%)
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWR 295
MP+++ + ++ + + + V A + GF + Y N L++Y K G + A +
Sbjct: 1 MPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQ 60
Query: 296 VFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
+F++I +N +WN + GL +G AL+L+D+M + T + L++C G
Sbjct: 61 LFDDIPD-KNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWN-TMISGLVSC---G 115
Query: 356 MVEKGRHIFKSMK------TDF------NIIPKLEH--------------------YGCM 383
E G +F M+ T+F +++ + H + +
Sbjct: 116 FHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSV 175
Query: 384 VDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNP 443
+D+ R G A V TM + D V W L+ +CS GN E+A + +E + P
Sbjct: 176 MDMYRRLGVFDYALSVFLTMEDR-DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ-P 233
Query: 444 GNYVILSNIYASADQWDGVAKLRKVMKGSQ 473
Y + + +D LR++ KG Q
Sbjct: 234 DEYTVSMVVSICSD-------LRELSKGKQ 256
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 159/311 (51%), Gaps = 33/311 (10%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ H + G+ +V A ALLDMY K GTL+ A F +M
Sbjct: 414 GKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS---------------- 457
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
EL R+ VSW +++G ++ + E+AL F M+ E P+ TLA+
Sbjct: 458 --------EL------RDEVSWNALLTGVARVGRSEQALSFFEGMQVEAK--PSKYTLAT 501
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L CAN+ AL +G+ + + ++G+ ++ + A+++MY+KC D A VF E + R
Sbjct: 502 LLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAAT-R 560
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+L WNS+I G +G+ + EL+ + EG PD VTF+G+L AC G VE G F
Sbjct: 561 DLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYF 620
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
SM T ++I P++EHY CM++L + G L + E + MP P + + AC +
Sbjct: 621 SSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRW 680
Query: 425 VELAEIAAESL 435
+L AA+ L
Sbjct: 681 SKLGAWAAKRL 691
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 160/299 (53%), Gaps = 4/299 (1%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+++HA +K D +T++ DMY K LE ARR+FD+ +++ +W + M+G+A
Sbjct: 282 GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAM 341
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
G A ELF LMP RN+VSW M+ GY ++++AL M E + + N VTL
Sbjct: 342 SGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN-VTLVW 400
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
IL C+ + +++G++ + ++G+ N+ V+NA+L+MY KCG + A F ++ LR
Sbjct: 401 ILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELR 460
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ SWN+++ G+A G+ +AL ++ M E P T LL C + + G+ I
Sbjct: 461 DEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIH 519
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHG 423
+ D I + G MVD+ + A EV + + D ++W +++ C +G
Sbjct: 520 GFLIRDGYKIDVVIR-GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNG 576
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 146/337 (43%), Gaps = 71/337 (21%)
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
+ LH +K G++ +V T+++D+Y K + ARR+FDE+
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI------------------ 223
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
+ PS VSW ++ Y + ++A+ +F +M E ++ P T++S+
Sbjct: 224 -----------VNPSD--VSWNVIVRRYLEMGFNDEAVVMFFKM-LELNVRPLNHTVSSV 269
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL-- 303
+ AC+ ALE+G+ + A A K + VS +V +MY KC ++ A RVF++ S
Sbjct: 270 MLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDL 329
Query: 304 ----------------------------RNLCSWNSMIMGLAVHGKCGKALELYDQMLRE 335
RN+ SWN+M+ G + +AL+ M +E
Sbjct: 330 KSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
Query: 336 GTTPDDVTFVGLLLACTHGGMVEKGRH----IFKSMKTDFNIIPKLEHYGCMVDLLGRAG 391
D+VT V +L C+ V+ G+ I++ D N+I ++D+ G+ G
Sbjct: 390 IENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRH-GYDTNVIVA----NALLDMYGKCG 444
Query: 392 KLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
L+ A + M D V W LL + G E A
Sbjct: 445 TLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 148/338 (43%), Gaps = 20/338 (5%)
Query: 168 PVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFL 227
P+ + N + + + G VD A ELF MP R+ SW +I+ ++N ++ +F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 228 RMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKC 287
RM + + + A +L +C + L + +++ K G+ N+ + +++++Y KC
Sbjct: 152 RMN-RDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKC 210
Query: 288 GHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGL 347
+ A RVF+EI + ++ SWN ++ G +A+ ++ +ML P + T +
Sbjct: 211 RVMSDARRVFDEIVNPSDV-SWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSV 269
Query: 348 LLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKP 407
+LAC+ +E G+ + ++ +++ + D+ + +L A V K
Sbjct: 270 MLACSRSLALEVGK-VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSK- 327
Query: 408 DSVIWGTLLGACSFHGNVELAEIAAESLFTLEP-RNPGNYVILSNIYASADQWDGVAKLR 466
D W + + + G A LF L P RN ++ + Y A +WD
Sbjct: 328 DLKSWTSAMSGYAMSGLTR----EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFL 383
Query: 467 KVMKGS-----------QITKSAGHSFLEEGGQLHKFI 493
+M+ + +G S ++ G Q H FI
Sbjct: 384 TLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+ +C++ + ++V+++ +++ N +E Y KCG +D A +F E+ R
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPE-R 125
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI- 363
+ SWN++I A +G + ++ +M R+G + +F G+L +C G++ R +
Sbjct: 126 DGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLR 182
Query: 364 -FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLL 416
+ ++ +VD+ G+ + +A V + + P V W ++
Sbjct: 183 QLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIV 235
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 207/464 (44%), Gaps = 46/464 (9%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLL-----EIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
KQ+H +++G + + + +L +L + + P V +N ++
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 83 XXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGF-APDV 141
L+S+M+ G P+ G+ +H + +K GF +
Sbjct: 293 YGSVLDS-LDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSL 351
Query: 142 FAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
+AL+DMY K +E + L+ +P + N++M G +E+F LM
Sbjct: 352 HVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDE 411
Query: 202 NV----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
V+ +T++ KAL L L P ++ +++ C
Sbjct: 412 GTGIDEVTLSTVL----------KALSLSL---------PESLHSCTLVHCC-------- 444
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLA 317
A K+G+ ++ VS ++++ Y K G +V+ +VF+E+ + C S+I G A
Sbjct: 445 -------AIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFC-LTSIINGYA 496
Query: 318 VHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKL 377
+G +++ +M R PD+VT + +L C+H G+VE+G IF S+++ + I P
Sbjct: 497 RNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGR 556
Query: 378 EHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFT 437
+ Y CMVDLLGRAG + +A ++ D V W +LL +C H N + AAE L
Sbjct: 557 KLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMN 616
Query: 438 LEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHS 481
LEP N Y+ +S Y ++ ++R++ ++ + G+S
Sbjct: 617 LEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYS 660
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 129/265 (48%), Gaps = 7/265 (2%)
Query: 163 LFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKA 222
+E P V T N + + G++ A E F M R+VV++ +ISG S+ +A
Sbjct: 37 FLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRA 96
Query: 223 LGLFLRM-ECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVL 281
+ L+ M C + +A T S+L C++ G +V GF N++V +A++
Sbjct: 97 IELYAEMVSC--GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALV 154
Query: 282 EMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDD 341
+YA +DVA ++F+E+ RNL N ++ G+ + E+Y +M EG +
Sbjct: 155 GLYACLRLVDVALKLFDEMLD-RNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNG 213
Query: 342 VTFVGLLLACTHGGMVEKGRHIFK-SMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVI 400
+T+ ++ C+H +V +G+ + +K+ +N I + +VD G L +
Sbjct: 214 LTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWN-ISNIFVANVLVDYYSACGDLSGSMRSF 272
Query: 401 QTMPMKPDSVIWGTLLGACSFHGNV 425
+P K D + W +++ C+ +G+V
Sbjct: 273 NAVPEK-DVISWNSIVSVCADYGSV 296
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 153/361 (42%), Gaps = 37/361 (10%)
Query: 46 IEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPN 105
I++L++ NL A V YN L+ LY++M G +
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRA-IELYAEMVSCGLRES 111
Query: 106 QYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFD 165
G +H I GF ++F +AL+ +YA + RL
Sbjct: 112 ASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACL-------RL-- 162
Query: 166 EMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGL 225
VD AL+LF M RN+ ++ + + + ++ +
Sbjct: 163 ----------------------VDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEV 200
Query: 226 FLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGF-FKNLYVSNAVLEMY 284
+LRME E + N +T ++ C++ + G+++ + K+G+ N++V+N +++ Y
Sbjct: 201 YLRMELE-GVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYY 259
Query: 285 AKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTF 344
+ CG + + R FN + +++ SWNS++ A +G +L+L+ +M G P F
Sbjct: 260 SACGDLSGSMRSFNAVPE-KDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPF 318
Query: 345 VGLLLACTHGGMVEKGRHI-FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
+ L C+ ++ G+ I +K F+ + L ++D+ G+ + + + Q++
Sbjct: 319 MSFLNFCSRNSDIQSGKQIHCYVLKMGFD-VSSLHVQSALIDMYGKCNGIENSALLYQSL 377
Query: 404 P 404
P
Sbjct: 378 P 378
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 197/450 (43%), Gaps = 73/450 (16%)
Query: 11 FSTLRNPNSKNIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEI----PNLHYAQAVLHHSP 66
FS L + + KQ+H + G++ + L KL+ + ++ AQ V S
Sbjct: 114 FSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDEST 173
Query: 67 NSTVFLYNKLLQAYXXX-XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
+S V+ +N LL+ S +++MR LG N Y G
Sbjct: 174 SSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQG 233
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARF 185
HA IK+G VF T+L+DMY K G + LARR+FDE+
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIV----------------- 276
Query: 186 GDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
R++V W MI+G + NK+ +ALGLF M EE I PN+V L +I
Sbjct: 277 --------------ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 246 LPACANLGALEIGQRVEAYARKN-GFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS-L 303
LP ++ AL++G+ V A+ K+ + + +V + ++++Y KCG + RVF GS
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF--YGSKQ 380
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
RN SW +++ G A +G+ +AL M +EG PD VT +L C +++G+ I
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 364 F-KSMKTDF------------------------NIIPKLEH-----YGCMVDLLGRAGKL 393
++K F + +LE + M+D L
Sbjct: 441 HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDL 500
Query: 394 REAYEVIQTMPM---KPDSVIWGTLLGACS 420
R EV + M + +PDSV G +L CS
Sbjct: 501 RAGIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 131/272 (48%), Gaps = 33/272 (12%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ +H + +K+ F P+V T+L+ MY+K G E RLFD +
Sbjct: 437 GKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE---------------- 480
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
RNV +WT MI Y +N + +F R+ P++VT+
Sbjct: 481 ---------------QRNVKAWTAMIDCYVENCDLRAGIEVF-RLMLLSKHRPDSVTMGR 524
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
+L C++L AL++G+ + + K F +VS +++MY KCG + A F+ + +++
Sbjct: 525 VLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAV-AVK 583
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+W ++I + A+ ++QM+ G TP+ TF +L C+ G V++ F
Sbjct: 584 GSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFF 643
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREA 396
M +N+ P EHY +++LL R G++ EA
Sbjct: 644 NLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 11/247 (4%)
Query: 210 ISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNG 269
I +++ E AL + +E + I NA T +++L AC +L G++V + R NG
Sbjct: 83 IQIFARQNNLEVALTILDYLE-QRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRING 141
Query: 270 FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK--CGKALE 327
N ++ ++ MY CG + A +VF+E S N+ SWN+++ G + GK L
Sbjct: 142 LESNEFLRTKLVHMYTACGSVKDAQKVFDESTS-SNVYSWNALLRGTVISGKKRYQDVLS 200
Query: 328 LYDQMLREGTTPDDVTFVGLLLACTHGGMVEKG--RHIFKSMKTDFNIIPKLEHYGCMVD 385
+ +M G + + + + + +G H FN + +VD
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFN---SVFLKTSLVD 257
Query: 386 LLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGN 445
+ + GK+ A V + ++ D V+WG ++ + H + + E + N
Sbjct: 258 MYFKCGKVGLARRVFDEI-VERDIVVWGAMIAGLA-HNKRQWEALGLFRTMISEEKIYPN 315
Query: 446 YVILSNI 452
VIL+ I
Sbjct: 316 SVILTTI 322
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 108/290 (37%), Gaps = 60/290 (20%)
Query: 23 GMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXX 82
+ Q K+IH Y L+ +L+ L+ + Y++ + P + L+++L Q
Sbjct: 433 AIKQGKEIHCYALKNLFLPNVSLVTSLM----VMYSKCGV---PEYPIRLFDRLEQRNVK 485
Query: 83 XXXXXXXCF----------SLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHF 132
C+ ++ M L H P+ G+ LH H
Sbjct: 486 AWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHI 545
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGAL 192
+K F F + ++ MY K G L A FD + V+ G+L
Sbjct: 546 LKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVK-------------------GSL 586
Query: 193 ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANL 252
+WT +I Y N+ + A+ F +M PN T ++L C+
Sbjct: 587 ------------TWTAIIEAYGCNELFRDAINCFEQM-VSRGFTPNTFTFTAVLSICSQA 633
Query: 253 GALEIGQRVEAYARKNGFFK--NLYVS----NAVLEMYAKCGHIDVAWRV 296
G ++ EAY N + NL S + V+E+ +CG ++ A R+
Sbjct: 634 GFVD-----EAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 152/313 (48%), Gaps = 35/313 (11%)
Query: 104 PNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRL 163
PN++ G+ +H+ +K DVF T+L+DMYAK G + R++
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 164 FDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKAL 223
FD M +RN V+WT++I+ +++ E+A+
Sbjct: 342 FDG-------------------------------MSNRNTVTWTSIIAAHAREGFGEEAI 370
Query: 224 GLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEM 283
LF M+ ++ N +T+ SIL AC ++GAL +G+ + A KN KN+Y+ + ++ +
Sbjct: 371 SLFRIMK-RRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWL 429
Query: 284 YAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
Y KCG A+ V ++ S R++ SW +MI G + G +AL+ +M++EG P+ T
Sbjct: 430 YCKCGESRDAFNVLQQLPS-RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Query: 344 FVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
+ L AC + + GR I K + + + + ++ + + G + EA+ V +M
Sbjct: 489 YSSALKACANSESLLIGRSIHSIAKKN-HALSNVFVGSALIHMYAKCGFVSEAFRVFDSM 547
Query: 404 PMKPDSVIWGTLL 416
P K + V W ++
Sbjct: 548 PEK-NLVSWKAMI 559
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 118/227 (51%), Gaps = 33/227 (14%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G+ LHA IK+ +V+ + L+ +Y K G
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCG----------------------------- 434
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
+ A + + +PSR+VVSWT MISG S +AL FL+ +E + PN T +S
Sbjct: 435 --ESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD-FLKEMIQEGVEPNPFTYSS 491
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
L ACAN +L IG+ + + A+KN N++V +A++ MYAKCG + A+RVF+ + +
Sbjct: 492 ALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE-K 550
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLAC 351
NL SW +MIMG A +G C +AL+L +M EG DD F +L C
Sbjct: 551 NLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 195/438 (44%), Gaps = 59/438 (13%)
Query: 23 GMNQVKQIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQ 78
GM +K+IH L+ DQ LI + + +L YA+ V P + ++
Sbjct: 97 GMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMID 156
Query: 79 AYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFA 138
Y F+L+ ++K G
Sbjct: 157 GYLKYGLEDEA-FALFED-----------------------------------YVKHGIR 180
Query: 139 -PDVFAATALLDMYAKVGTLELARRLFDEMP---VREVPTWNAMMAGHARFGDVDGALEL 194
+ LL++ ++ EL R++ M V + ++++ +A+ G++ AL
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 195 FRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGA 254
F +M ++V+SWT +IS S+ KA+G+F+ M +PN T+ SIL AC+ A
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGM-LNHWFLPNEFTVCSILKACSEEKA 299
Query: 255 LEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIM 314
L G++V + K +++V ++++MYAKCG I +VF+ + S RN +W S+I
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGM-SNRNTVTWTSIIA 358
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
A G +A+ L+ M R +++T V +L AC G + G+ + + N I
Sbjct: 359 AHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK--NSI 416
Query: 375 PKLEHYG-CMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVE-----LA 428
K + G +V L + G+ R+A+ V+Q +P + D V W ++ CS G+ L
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGCSSLGHESEALDFLK 475
Query: 429 EIAAESLFTLEPRNPGNY 446
E+ E +EP NP Y
Sbjct: 476 EMIQEG---VEP-NPFTY 489
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 93/242 (38%), Gaps = 40/242 (16%)
Query: 28 KQIHGYTLRTGIDQT----KTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXX 83
K++H ++ I++ TL+ + A VL P+ V + ++
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG-CSS 463
Query: 84 XXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFA 143
+M G PN + G+ +H+ K+ +VF
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFV 523
Query: 144 ATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV 203
+AL+ MYAK G + A R+FD MP +N+
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDS-------------------------------MPEKNL 552
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
VSW MI GY++N +AL L RME E + + + A+IL C G +E+ + VE+
Sbjct: 553 VSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI-FATILSTC---GDIELDEAVES 608
Query: 264 YA 265
A
Sbjct: 609 SA 610
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWR 295
MP+ + +CANL +LE ++V + ++ F + ++N V+ M+ +C I A R
Sbjct: 233 MPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKR 292
Query: 296 VFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
VF+ + +++ SW+ M+ + +G AL L+++M + G P++ TF+ + LAC G
Sbjct: 293 VFDHMVD-KDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 351
Query: 356 MVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTL 415
+E+ F SMK + I PK EHY ++ +LG+ G L EA + I+ +P +P + W +
Sbjct: 352 GIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAM 411
Query: 416 LGACSFHGNVELAEIAAESLFTLEP 440
HG+++L + E + ++P
Sbjct: 412 RNYARLHGDIDLEDYMEELMVDVDP 436
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 77/194 (39%), Gaps = 33/194 (17%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGD 187
+H HF++S F D ++ M+ + ++ A+R+FD M +++ +W+ MM ++ G
Sbjct: 258 VHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGM 317
Query: 188 VDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
D AL LF M + + PN T ++
Sbjct: 318 GDDALHLFEEM--------------------------------TKHGLKPNEETFLTVFL 345
Query: 248 ACANLGALEIG-QRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
ACA +G +E ++ ++G VL + KCGH+ A + ++
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 307 CSWNSMIMGLAVHG 320
W +M +HG
Sbjct: 406 DFWEAMRNYARLHG 419
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 124/239 (51%), Gaps = 16/239 (6%)
Query: 273 NLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQM 332
+L ++ +LEMY+ CG + A VF ++ S +NL +W +I A +G A++++ +
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKM-SEKNLETWCIIIRCFAKNGFGEDAIDMFSRF 346
Query: 333 LREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGK 392
EG PD F G+ AC G V++G F+SM D+ I P +E Y +V++ G
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 393 LREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPR--NPGNYVILS 450
L EA E ++ MPM+P+ +W TL+ HGN+EL + AE + L+P N +
Sbjct: 407 LDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFI 466
Query: 451 NIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALL 509
+ AS + + + K ++ G KS+ + +F D + P+++E+F LL
Sbjct: 467 PVKASDVEKESLKKRSGILHG---VKSS----------MQEFRAGDTNLPENDELFQLL 512
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 171 EVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRME 230
++ + + ++ ++ G + A +F M +N+ +W +I ++KN E A+ +F R +
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 231 CEEDIMPNAVTLASILPACANLGALEIG-QRVEAYARKNGFFKNLYVSNAVLEMYAKCGH 289
EE +P+ I AC LG ++ G E+ +R G ++ +++EMYA G
Sbjct: 348 -EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 290 IDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGK------CGKALELYD-----QMLREGTT 338
+D A + N+ W +++ VHG C + +E D + REG
Sbjct: 407 LDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFI 466
Query: 339 P 339
P
Sbjct: 467 P 467
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 144/288 (50%), Gaps = 19/288 (6%)
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDV 188
++ G+ PDV+ +++ K+G ++ A + D+M R+ T+N +++ + V
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381
Query: 189 DGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRME---CEEDIMPNAVT 241
+ A EL R++ S+ +V ++ ++I G + + A+ LF M CE P+ T
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE----PDEFT 437
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI- 300
++ + + G L+ + +G +++ N +++ + K A +F+E+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 301 --GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVE 358
G RN ++N++I GL + A +L DQM+ EG PD T+ LL GG ++
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 359 KGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK 406
K I ++M ++ P + YG ++ L +AG++ A ++++++ MK
Sbjct: 558 KAADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 142/309 (45%), Gaps = 16/309 (5%)
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVD 189
+ GF PD + L++ K G ++ A + D M +V T+N++++G + G+V
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 190 GALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
A+E+ M +R N V++ T+IS K Q E+A L R+ + I+P+ T S+
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL-ARVLTSKGILPDVCTFNSL 406
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GS 302
+ + + R G + + N +++ G +D A + ++ G
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
R++ ++N++I G K +A E++D+M G + + VT+ L+ VE
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGAC 419
+ M + P Y ++ R G +++A +++Q M +PD V +GTL+
Sbjct: 527 LMDQMIMEGQK-PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 420 SFHGNVELA 428
G VE+A
Sbjct: 586 CKAGRVEVA 594
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 152/371 (40%), Gaps = 51/371 (13%)
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAG 181
++ HA G PDV L+ + L A + ++MP V + T+ +M G
Sbjct: 174 EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQG 233
Query: 182 HARFGDVDGALELFRLMP----SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
+ GD+DGAL + M S + VS ++ G+ K + E AL M ++ P
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
+ T +++ G ++ + + G+ ++Y N+V+ K G + A V
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 298 NEI--------------------------------------GSLRNLCSWNSMIMGLAVH 319
+++ G L ++C++NS+I GL +
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
A+EL+++M +G PD+ T+ L+ + G +++ ++ K M+ +
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVIT 472
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGACSFHGNVELAEIAAESLF 436
Y ++D +A K REA E+ M + +SV + TL+ VE A + +
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 437 TLEPRNPGNYV 447
+E + P Y
Sbjct: 533 -MEGQKPDKYT 542
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 20/241 (8%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPV----REVPTWNAMMAGHARFGDVDGA 191
G PD F L+D G L+ A + +M + R V T+N ++ G + A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 192 LELFRLMP----SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
E+F M SRN V++ T+I G K+++ E A L +M E P+ T S+L
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM-IMEGQKPDKYTYNSLLT 548
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLR 304
G ++ + NG ++ ++ K G ++VA ++ I G
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDD-----VTFVGLLLACTHGGMVEK 359
++N +I GL K +A+ L+ +ML + P D + F GL C GG + +
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL---CNGGGPIRE 665
Query: 360 G 360
Sbjct: 666 A 666
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 143/324 (44%), Gaps = 13/324 (4%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
+L+ +M G PN L + I+ PDVF +AL+D
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 151 YAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGALELFRLMPSR----N 202
+ K G L A +L+DEM R + T+++++ G +D A ++F M S+ +
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
VV++ T+I G+ K K+ E+ + +F M + ++ N VT ++ G ++ Q +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR---NLCSWNSMIMGLAVH 319
+G N+ N +L+ K G ++ A VF + + + ++N MI G+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
GK +L+ + +G PD V + ++ G E+ +FK MK D +P
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED-GTLPNSGC 573
Query: 380 YGCMVDLLGRAGKLREAYEVIQTM 403
Y ++ R G + E+I+ M
Sbjct: 574 YNTLIRARLRDGDREASAELIKEM 597
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 165/387 (42%), Gaps = 51/387 (13%)
Query: 92 SLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMY 151
+L QM + G+ PN L + G PD+ +++
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 152 AKVGTLELARRLFDEMPVRE----VPTWNAMMAGHARFGDVDGALELFRLMPSR----NV 203
K G +LA L ++M + V +N ++ G ++ +D AL LF+ M ++ NV
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV-- 261
V+++++IS ++ A L M E I P+ T ++++ A G L +++
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 262 EAYARK------------NGF---------------------FKNLYVSNAVLEMYAKCG 288
E R NGF F ++ N +++ + K
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 289 HIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFV 345
++ VF E+ G + N ++N +I GL G C A E++ +M+ +G P+ +T+
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 346 GLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPM 405
LL G +EK +F+ ++ + P + Y M++ + +AGK+ + +++ + +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 406 ---KPDSVIWGTLLGACSFHGNVELAE 429
KPD V + T++ G+ E A+
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEAD 556
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 203/505 (40%), Gaps = 68/505 (13%)
Query: 61 VLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXX 120
++ P ++ ++KLL A SL QM+ LG N Y
Sbjct: 72 MVKSRPFPSIIEFSKLLSAIAKMNKFDVV-ISLGEQMQNLGIPHNHYTYSILINCFCRRS 130
Query: 121 XXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR---------- 170
+ +K G+ P++ ++LL+ Y + A L D+M V
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 171 -----------------------------EVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
++ T+ ++ G + GD D A L M
Sbjct: 191 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 250
Query: 202 N----VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
V+ + T+I G K K + AL LF ME + I PN VT +S++ N G
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME-TKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR---NLCSWNSMIM 314
R+ + + +++ +A+++ + K G + A ++++E+ ++ +++S+I
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
G +H + +A ++++ M+ + PD VT+ L+ VE+G +F+ M + ++
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLV 428
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGACSFHGNVELAEIA 431
Y ++ L +AG A E+ + M + P+ + + TLL +G +E A +
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 432 AESL--FTLEPRNPGNYVILSNIYASA---DQWDGVAKLRKVMKGSQITKSAGHSFL--- 483
E L +EP +++ + + D WD L +KG + A ++ +
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS--LKGVKPDVVAYNTMISGF 546
Query: 484 ------EEGGQLHKFIVEDRSHPKS 502
EE L K + ED + P S
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNS 571
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 34/257 (13%)
Query: 188 VDGALELFRLM----PSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
+D A+ LF M P +++ ++ ++S +K +++ + L +M+ I N T +
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ-NLGIPHNHYTYS 120
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI--- 300
++ L + V K G+ N+ +++L Y I A + +++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 301 GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKG 360
G N ++N++I GL +H K +A+ L D+M+ +G PD VT+ G+V G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY----------GVVVNG 230
Query: 361 RHIFKSMKTD--FNIIPKLEH---------YGCMVDLLGRAGKLREA---YEVIQTMPMK 406
+ K TD FN++ K+E Y ++D L + + +A ++ ++T ++
Sbjct: 231 --LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 407 PDSVIWGTLLGACSFHG 423
P+ V + +L+ +G
Sbjct: 289 PNVVTYSSLISCLCNYG 305
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 170/403 (42%), Gaps = 61/403 (15%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEM------PVREVPTWNAM 178
+ H +SGFA ++ L++ Y K G + A + DEM P T+N
Sbjct: 292 ARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPT--TSTYNIY 349
Query: 179 MAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPN 238
+ FG +D A EL M + +VVS+ T++ GY K ++ +A LF + DI P+
Sbjct: 350 ICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG-DIHPS 408
Query: 239 AVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN 298
VT +++ G LE QR++ F ++ +++ + K G++ +A V++
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 299 E-----------------IGSLR----------------------NLCSWNSMIMGLAVH 319
E +G LR +L +N I GL
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 528
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G KA+E ++ R G PD VT+ ++ G + R+++ M + P +
Sbjct: 529 GNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RLYPSVIT 587
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGACSFHGNVE-----LAEIA 431
Y ++ +AG+L +A++ M ++P+ + LL GN++ L ++
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647
Query: 432 AESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQI 474
E + P N +Y +L + ++W+ V KL K M +I
Sbjct: 648 EEGI----PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEI 686
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 13/233 (5%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR-----EVPTWNAMMAGH 182
++ ++ G PD +A T ++G + A RL +EM ++ +N + G
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 525
Query: 183 ARFGDVDGALE----LFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPN 238
+ G++ A+E +FR+ + V++TT+I GY +N Q++ A L+ M + + P+
Sbjct: 526 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM-LRKRLYPS 584
Query: 239 AVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF- 297
+T ++ A G LE + +K G N+ NA+L K G+ID A+R
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Query: 298 --NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLL 348
E G N S+ +I K + ++LY +ML + PD T L
Sbjct: 645 KMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 52/349 (14%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP----TWNAMMAGHA 183
++ I+ G P V +LD K G LE +++ EM R + T+N ++ G +
Sbjct: 225 VYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFS 284
Query: 184 RFGDVDGALEL--------FRLMPSRNVVSWTTMISGYSKNKQYEKALG----------- 224
+ G ++ A F + P S+ +I GY K ++ A G
Sbjct: 285 KNGKMEEARRFHGDMRRSGFAVTP----YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIY 340
Query: 225 -------LFLRMECEEDIMPNAVTLASILPACANL-------GALEIGQRVEAY-----A 265
+++ C+ + +A L S + A + G +++G+ VEA
Sbjct: 341 PTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL 400
Query: 266 RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS---LRNLCSWNSMIMGLAVHGKC 322
R ++ N +++ + G+++ A R+ E+ + ++ ++ +++ G +G
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 323 GKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGC 382
A E+YD+MLR+G PD + + G +K + + M + P L Y
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 383 MVDLLGRAGKLREAYEV---IQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+D L + G L +A E I + + PD V + T++ +G ++A
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 9/222 (4%)
Query: 278 NAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGT 337
+ V+EMY+ C D A VFNE+ RN +W +MI LA +G+ +A++++ + + EG
Sbjct: 147 HTVIEMYSGCRSTDDALNVFNEMPK-RNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGN 205
Query: 338 TPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAY 397
PD F + AC G + +G F+SM D+ ++ +E Y ++++L G L EA
Sbjct: 206 KPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEAL 265
Query: 398 EVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASAD 457
+ ++ M ++P +W TL+ C G +EL + AE + L+ + A A
Sbjct: 266 DFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKAS 325
Query: 458 QWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSH 499
D + K ++ Q+ + + ++H+F D SH
Sbjct: 326 --DSAMEKLKELRYCQMIRD------DPKKRMHEFRAGDTSH 359
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 2/159 (1%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELF 195
G+ D L + +V LE AR + D + + +++ ++ ++ D AL +F
Sbjct: 107 GYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVF 166
Query: 196 RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL 255
MP RN +W TMI +KN + E+A+ +F R EE P+ ++ AC ++G +
Sbjct: 167 NEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRF-IEEGNKPDKEIFKAVFFACVSIGDI 225
Query: 256 EIG-QRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVA 293
G E+ R G ++ V+EM A CGH+D A
Sbjct: 226 NEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEA 264
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
Query: 278 NAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNS-----MIMGLAVHGKCGKALELYDQM 332
NA++EMY+ C +D A +VF E+ WNS M+ +G +A++L+ +
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPE------WNSGTLCVMMRCFVNNGYGEEAIDLFTRF 211
Query: 333 LREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGK 392
EG P+ F + CT G V++G F++M ++ I+P +EHY + +L +G
Sbjct: 212 KEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGH 271
Query: 393 LREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLE 439
L EA ++ MPM+P +W TL+ HG+VEL + AE + L+
Sbjct: 272 LDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGA 191
G+A D+ L + K LE AR + + + P NA++ ++ VD A
Sbjct: 114 GYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDA 173
Query: 192 LELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACAN 251
L++F MP N + M+ + N E+A+ LF R + EE PN + C
Sbjct: 174 LKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK-EEGNKPNGEIFNQVFSTCTL 232
Query: 252 LGALEIGQ-RVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWN 310
G ++ G + +A R+ G ++ ++V +M A GH+D A + ++ W
Sbjct: 233 TGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWE 292
Query: 311 SMIMGLAVHG------KCGKALELYDQMLREGTTPDDVTFVGLL 348
+++ VHG +C + +E D T D V+ GL+
Sbjct: 293 TLMNLSRVHGDVELGDRCAELVEKLD-----ATRLDKVSSAGLV 331
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 160/364 (43%), Gaps = 17/364 (4%)
Query: 21 NIGMNQVKQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNS----TVFLYNKL 76
++ ++ +K++ + G+ T+I+ L N++ A + N V YN L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 77 LQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSG 136
++ L S M +PN + L+ IK
Sbjct: 298 IRCLCNYGRWSDAS-RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 137 FAPDVFAATALLDMYAKVGTLELARRLFDEMPVRE----VPTWNAMMAGHARFGDVDGAL 192
PD+F ++L++ + L+ A+ +F+ M ++ V T+N ++ G + VD +
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 193 ELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA 248
ELFR M R N V++TT+I G+ + ++ + A +F +M + ++P+ +T + +L
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM-VSDGVLPDIMTYSILLDG 475
Query: 249 CANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRN 305
N G +E V Y +++ ++Y N ++E K G ++ W +F + G N
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 306 LCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFK 365
+ ++ +M+ G G +A L+ +M EG PD T+ L+ A G + +
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595
Query: 366 SMKT 369
M++
Sbjct: 596 EMRS 599
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 161/387 (41%), Gaps = 51/387 (13%)
Query: 92 SLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMY 151
SL QM +G+ P+ + L + G PD+ +++
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 152 AKVGTLELARRLFDEMPVRE----VPTWNAMMAGHARFGDVDGALELFRLMPSR----NV 203
K G ++LA L +M + V +N ++ + +V+ AL LF M ++ NV
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV-- 261
V++ ++I ++ A L M E I PN VT ++++ A G L +++
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 262 EAYARK------------NGF---------------------FKNLYVSNAVLEMYAKCG 288
E R NGF F N+ N +++ + K
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 289 HIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFV 345
+D +F E+ G + N ++ ++I G +C A ++ QM+ +G PD +T+
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 346 GLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPM 405
LL + G VE +F+ ++ + P + Y M++ + +AGK+ + +++ ++ +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 406 ---KPDSVIWGTLLGACSFHGNVELAE 429
KP+ V + T++ G E A+
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 155/366 (42%), Gaps = 19/366 (5%)
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
P ++ ++KLL A SL QM+ LG S N Y
Sbjct: 77 PFPSIVEFSKLLSAIAKMNKFDLV-ISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLA 135
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAG 181
+ A +K G+ PD+ +LL+ + + A L +M + T+N ++ G
Sbjct: 136 LAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 182 HARFGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
R A+ L M + ++V++ +++G K + AL L +ME + I P
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME-QGKIEP 254
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF 297
V +I+ A N + + G N+ N+++ G A R+
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 298 NEIGSLR---NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA-CTH 353
+++ + N+ +++++I GK +A +LYD+M++ PD T+ L+ C H
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 354 GGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSV 410
+ ++ +H+F+ M + + P + Y ++ +A ++ E E+ + M + ++V
Sbjct: 375 DRL-DEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 411 IWGTLL 416
+ TL+
Sbjct: 433 TYTTLI 438
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 131/271 (48%), Gaps = 13/271 (4%)
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVD 189
++G PD +LL + ++ G E AR LFDEM R +V ++N ++ + G +D
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 190 GALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
A E+ MP + NVVS++T+I G++K ++++AL LF M I + V+ ++
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY-LGIALDRVSYNTL 450
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS--- 302
L +G E + G K++ NA+L Y K G D +VF E+
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV 510
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
L NL +++++I G + G +A+E++ + G D V + L+ A G+V
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKL 393
+ M T I P + Y ++D GR+ +
Sbjct: 571 LIDEM-TKEGISPNVVTYNSIIDAFGRSATM 600
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 141/298 (47%), Gaps = 17/298 (5%)
Query: 136 GFAPDVFAATALLDMYAKVG-TLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDG 190
G P++ A++D K G + + FDEM V T+N+++A +R G +
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 191 ALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
A LF M +R +V S+ T++ K Q + A + +M + IMPN V+ ++++
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR-IMPNVVSYSTVI 416
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL--- 303
A G + + R G + N +L +Y K G + A + E+ S+
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
+++ ++N+++ G GK + +++ +M RE P+ +T+ L+ + GG+ ++ I
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGA 418
F+ K+ + + Y ++D L + G + A +I M + P+ V + +++ A
Sbjct: 537 FREFKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 9/230 (3%)
Query: 207 TTMISGYSKNKQYEKALGLF-LRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYA 265
T +I + +KA+G + ++ E ++++ G + I +R+ A
Sbjct: 200 TYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETA 259
Query: 266 RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN---EIGSLRNLCSWNSMIMGLAVHG-K 321
G+ +Y +A++ Y + G + A VFN E G NL ++N++I G +
Sbjct: 260 FAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME 319
Query: 322 CGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYG 381
+ + +D+M R G PD +TF LL C+ GG+ E R++F M T+ I + Y
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM-TNRRIEQDVFSYN 378
Query: 382 CMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLLGACSFHGNVELA 428
++D + + G++ A+E++ MP+K P+ V + T++ + G + A
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 138/300 (46%), Gaps = 20/300 (6%)
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEM-PVREVPTWNAMMA---GHARFGDV 188
+K G PDV ++ + +G ++ A + EM +R PT M G+A+ GD+
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 189 DGALELFRLMPSRNVV----SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
+LE+F +M V ++ +I+G + +Q EKA+ + M + N T
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA-GVSANEHTYTK 664
Query: 245 ILPACANLGALEIGQRVEAYAR--KNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
I+ A++G + G+ E + R G +++ A+L+ K G + A V E+ +
Sbjct: 665 IMQGYASVG--DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 303 L---RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEK 359
RN +N +I G A G +A +L QM +EG PD T+ + AC+ G + +
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNR 782
Query: 360 GRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAG---KLREAYEVIQTMPMKPDSVIWGTLL 416
+ M+ + P ++ Y ++ RA K YE ++ M +KPD ++ LL
Sbjct: 783 ATQTIEEMEA-LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 146/347 (42%), Gaps = 17/347 (4%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVG----TLELARRLFDEMPVREVPTWNAMMA 180
G ++ + GF P V L+++Y KVG LE++R + +E + T++ M+
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
Query: 181 GHARFGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIM 236
G + D A +F M +V+ + +IS + ++A+ M+
Sbjct: 528 GFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH-R 586
Query: 237 PNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRV 296
P T I+ A G + V R+ G ++ N ++ + ++ A +
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEI 646
Query: 297 FNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTH 353
+E+ G N ++ ++ G A G GKA E + ++ EG D T+ LL AC
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 706
Query: 354 GGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSV 410
G ++ + K M NI Y ++D R G + EA ++IQ M +KPD
Sbjct: 707 SGRMQSALAVTKEMSAR-NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIH 765
Query: 411 IWGTLLGACSFHGNVELAEIAAESLFTLEPR-NPGNYVILSNIYASA 456
+ + + ACS G++ A E + L + N Y L +A A
Sbjct: 766 TYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 812
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 15/280 (5%)
Query: 136 GFAPDVFAATALLDMYAKVG-----TLELARRLFDEMPVREVPTWNAMMAGHARFGDVDG 190
G P T+L+ YA VG L R++ +E + T++ ++ G ++ G +
Sbjct: 339 GITPTSRIYTSLIHAYA-VGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEA 397
Query: 191 ALELF----RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
A F R+ + N + +I + + E+A L ME EE I +++
Sbjct: 398 ADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME-EEGIDAPIAIYHTMM 456
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAW---RVFNEIGSL 303
+ + G V ++ GF + ++ +Y K G I A RV E G
Sbjct: 457 DGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVK 516
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
NL +++ MI G A +++ M++EG PD + + ++ A G +++
Sbjct: 517 HNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQT 576
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
K M+ P + ++ ++G +R + EV M
Sbjct: 577 VKEMQ-KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 3/195 (1%)
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
I C + AL+ + V + + ++ N+++EMY+ CG ++ A VFN + R
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPE-R 245
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
NL +W +I A +G+ A++ + + +EG PD F + AC G + +G F
Sbjct: 246 NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHF 305
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+SM ++ IIP +EHY +V +L G L EA +++ M+P+ +W TL+ HG+
Sbjct: 306 ESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVES--MEPNVDLWETLMNLSRVHGD 363
Query: 425 VELAEIAAESLFTLE 439
+ L + + + L+
Sbjct: 364 LILGDRCQDMVEQLD 378
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 169 VREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLR 228
+ ++ +N+++ ++ G V+ AL +F MP RN+ +W +I ++KN Q E A+ F R
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 229 MECEEDIMPNAVTLASILPACANLGALEIG-QRVEAYARKNGFFKNLYVSNAVLEMYAKC 287
+ +E P+ I AC LG + G E+ ++ G + ++++M A+
Sbjct: 273 FK-QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 288 GHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHG------KCGKALELYD 330
G++D A R + N+ W +++ VHG +C +E D
Sbjct: 332 GYLDEALRFVESMEP--NVDLWETLMNLSRVHGDLILGDRCQDMVEQLD 378
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 139/300 (46%), Gaps = 17/300 (5%)
Query: 139 PDVFAATALLDMYAKVGTLELARRLFDEMPV----REVPTWNAMMAGHARFGDVDGALEL 194
P+ T ++ + + G L+ +FDEMP R V ++ A++ + R G + +LEL
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 195 FRLMP----SRNVVSWTTMISGYSKNK-QYEKALGLFLRMECEEDIMPNAVTLASILPAC 249
M S +++++ T+I+ ++ +E LGLF M E I P+ VT ++L AC
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMR-HEGIQPDIVTYNTLLSAC 257
Query: 250 ANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNL 306
A G + + V G +L + ++E + K ++ + E+ GSL ++
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
S+N ++ A G +A+ ++ QM G TP+ T+ LL G + R +F
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGTLLGACSFHG 423
MK+ N P Y ++++ G G +E + M ++PD + ++ AC G
Sbjct: 378 MKSS-NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 129/314 (41%), Gaps = 48/314 (15%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVDGA 191
G PD+ + LL+ YAK G+++ A +F +M T++ ++ + G D
Sbjct: 312 GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV 371
Query: 192 LELFRLMPSRNV----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
+LF M S N ++ +I + + +++ + LF M EE+I P+ T I+
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM-VEENIEPDMETYEGIIF 430
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN---EIGS-- 302
AC G E +++ Y N + V+E + + + A FN E+GS
Sbjct: 431 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 490
Query: 303 ---------------------------------LRNLCSWNSMIMGLAVHGKCGKALELY 329
RN ++N+ I GK +A++ Y
Sbjct: 491 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Query: 330 DQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGR 389
M + PD+ T +L + +V++ R F+ MK +I+P + Y M+ + G+
Sbjct: 551 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKAS-DILPSIMCYCMMLAVYGK 609
Query: 390 AGKLREAYEVIQTM 403
+ + E+++ M
Sbjct: 610 TERWDDVNELLEEM 623
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 172/413 (41%), Gaps = 27/413 (6%)
Query: 28 KQIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXX 87
+ +H L + +D T+ L NL + V++ S ++ + L ++
Sbjct: 61 EMVHSQPLPSIVDFTRLLTAT----ANLRRYETVIYFSQKMELYGISHDLYSFTILIHCF 116
Query: 88 XXC------FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDV 141
C S+ +M LG+ P+ L +KSG+ P+V
Sbjct: 117 CRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNV 176
Query: 142 FAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVDGALELFRL 197
L+D K G L +A L +EM + +V T+N ++ G G A + R
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 198 MPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
M R +VV++T +I + K ++A L+ M + + PN VT SI+ G
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM-IQSSVDPNNVTYNSIINGLCMHG 295
Query: 254 ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWN 310
L ++ G F N+ N ++ + K +D ++F + G ++ ++N
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 311 SMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTD 370
++I G GK AL+++ M+ TPD +T LL G +E F M+
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 371 FNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGT-LLGAC 419
I + Y M+ L +A K+ +A+E+ +P +KPD+ + +LG C
Sbjct: 416 EKYI-GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 12/249 (4%)
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDV 188
+K PDV TAL+D++ K G L+ A+ L+ EM V T+N+++ G G +
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 189 DGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
A + F LM S+ NVV++ T+ISG+ K + ++ + LF RM CE + T +
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNT 356
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ +G L + + + ++ +L G I+ A F+++
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416
Query: 305 N---LCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
+ ++N MI GL K KA EL+ ++ EG PD T+ ++L G +
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 476
Query: 362 HIFKSMKTD 370
+ + MK +
Sbjct: 477 ELIRRMKEE 485
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 155/356 (43%), Gaps = 30/356 (8%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEM------PVREVPTWNAMMAGHARFGDVD 189
G + D+++ T L+ + + L A + +M P + T+ +++ G +
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEP--SIVTFGSLLHGFCLVNRIG 158
Query: 190 GALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
A L LM NVV + T+I G KN + AL L ME ++ + + VT ++
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME-KKGLGADVVTYNTL 217
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR- 304
L G R+ K ++ A+++++ K G++D A ++ E+
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Query: 305 --NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
N ++NS+I GL +HG+ A + +D M +G P+ VT+ L+ MV++G
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 363 IFKSMKTD-FNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLLGA 418
+F+ M + FN + Y ++ + GKLR A ++ M + PD + LL
Sbjct: 338 LFQRMSCEGFN--ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 419 CSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQI 474
+G +E A + + + R Y+ I A G+ K KV K ++
Sbjct: 396 LCVNGEIESALVKFDDM-----RESEKYI---GIVAYNIMIHGLCKADKVEKAWEL 443
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 12/256 (4%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVRE----VPTWNAMMA 180
+ LH IK PD+F +L++ + L+ A+++F+ M ++ + T+N ++
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 181 GHARFGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIM 236
G + V+ ELFR M R + V++TT+I G + + A +F +M + +
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM-VSDGVP 392
Query: 237 PNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRV 296
P+ +T + +L N G LE V Y +K+ ++Y+ ++E K G +D W +
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 297 FNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTH 353
F + G N+ ++N+MI GL +A L +M +G PD T+ L+ A
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Query: 354 GGMVEKGRHIFKSMKT 369
G + + M++
Sbjct: 513 DGDKAASAELIREMRS 528
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 163/379 (43%), Gaps = 52/379 (13%)
Query: 92 SLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMY 151
+L QM +G+ P+ L ++ G P++ +++
Sbjct: 101 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
Query: 152 AKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVDGALELFRLMPSR----NV 203
K G ++LA L ++M +V +N ++ ++ VD AL LF+ M ++ NV
Sbjct: 161 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 220
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
V+++++IS ++ A L M E+ I PN VT +++ A G +++
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 264 YARK--------------NGF---------------------FKNLYVSNAVLEMYAKCG 288
K NGF F +L N +++ + K
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 289 HIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFV 345
++ +F E+ G + + ++ ++I GL G C A +++ QM+ +G PD +T+
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 346 GLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPM 405
LL + G +EK +F M+ I + Y M++ + +AGK+ + +++ ++ +
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 406 ---KPDSVIWGTLL-GACS 420
KP+ V + T++ G CS
Sbjct: 459 KGVKPNVVTYNTMISGLCS 477
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 163/383 (42%), Gaps = 76/383 (19%)
Query: 168 PVREVPTWNAMMAGHARFGDVDGALEL----FRLMPSRNVVSWTTMISGYSKNKQYEKAL 223
P+ + +N +++ A+ D + L RL S N+ ++ +I+ + + Q AL
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 224 GLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEM 283
L +M + P+ VTL+S+L NG+ +S+AV
Sbjct: 66 ALLGKM-MKLGYEPSIVTLSSLL---------------------NGYCHGKRISDAV--- 100
Query: 284 YAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
+D E+G + ++ ++I GL +H K +A+ L D+M++ G P+ VT
Sbjct: 101 ----ALVDQMV----EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 152
Query: 344 FVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH---------YGCMVDLLGRAGKLR 394
+ G+++ G+ ++G + FN++ K+E + ++D L + +
Sbjct: 153 Y-GVVV----NGLCKRG-----DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 395 EA---YEVIQTMPMKPDSVIWGTLLGA-CSFHGNVELAEIAAESLFTLEPRNPGNYVILS 450
+A ++ ++T ++P+ V + +L+ CS+ + +++ ++ + N + L
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 451 NIYASADQWDGVAKLRKVMKGSQITKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLD 510
+ + ++ KL M I +S ++ F + DR LD
Sbjct: 263 DAFVKEGKFVEAEKLHDDM----IKRSIDPDIFTYNSLINGFCMHDR-----------LD 307
Query: 511 GVYEMFKFNRSAFECHLDLDLCN 533
+MF+F S +C DLD N
Sbjct: 308 KAKQMFEFMVSK-DCFPDLDTYN 329
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 148/309 (47%), Gaps = 26/309 (8%)
Query: 130 AHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPV----REVPTWNAMMAGHARF 185
A+ + G+ P + +++ K+G ++ A + MP +V ++N+++ GH R
Sbjct: 45 AYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRN 104
Query: 186 GDVDGA---LELFR----LMPSRNVVSWTTMISGYSKNKQYEKA---LGLFLRMECEEDI 235
GD+ A LE R + ++VS+ ++ +G+SK K ++ +G+ L+ C
Sbjct: 105 GDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CS--- 160
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWR 295
PN VT ++ + G L++ + +++ N+ +++ Y K G ++VA
Sbjct: 161 -PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 296 VFNEIGSLR---NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
++ E+ +R N+ ++ ++I G G+ +A E+Y +M+ + P+ + + ++
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDS 409
G + M + + YG ++ L GKL+EA E+++ M + PD
Sbjct: 280 QRGDSDNAMKFLAKMLNQ-GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338
Query: 410 VIWGTLLGA 418
VI+ T++ A
Sbjct: 339 VIFTTMMNA 347
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 147/343 (42%), Gaps = 54/343 (15%)
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEM-PVR---EVPTWNAMMAGHARFGDVD 189
+ +P+V T L+D Y K G LE+A L+ EM VR V T+ A++ G + G++
Sbjct: 191 RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQ 250
Query: 190 GALELF-RLMPSR---NVVSWTTMISGYSKNKQYEKALGLFLRMECEE---DIMPNAVTL 242
A E++ R++ R N + +TT+I G+ + + A+ +M + DI V +
Sbjct: 251 RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVII 310
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI-- 300
+ + C N G L+ + K+ ++ + ++ Y K G + A +++++
Sbjct: 311 SGL---CGN-GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE 366
Query: 301 -GSLRNLCSWNSMIMGLAVHGKCGKAL------------------------------ELY 329
G ++ + ++MI G+A +G+ +A+ L+
Sbjct: 367 RGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLF 426
Query: 330 DQMLREGTTPDDVTFVGLLLA-CTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLG 388
++ G PD + + C G +V+ + K+ ++ L Y ++ L
Sbjct: 427 SKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK--LKTRMVQEGLLLDLLAYTTLIYGLA 484
Query: 389 RAGKLREAYEVIQTM---PMKPDSVIWGTLLGACSFHGNVELA 428
G + EA +V M + PDS ++ L+ A GN+ A
Sbjct: 485 SKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 17/232 (7%)
Query: 130 AHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAGHARF 185
A + G D+ A ++ G L+ A + ++M V ++ + MM + +
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 186 GDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
G + A+ ++ + R +VV+ +TMI G +KN Q +A+ F C E N V
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF----CIEK--ANDVM 405
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI- 300
++ A G +R+ + + G + ++ + + K G++ A+++ +
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 301 --GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA 350
G L +L ++ ++I GLA G +A +++D+ML G +PD F L+ A
Sbjct: 466 QEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 157/356 (44%), Gaps = 48/356 (13%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
+L+++M G P+ + L + I+ P+V +AL+D
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 151 YAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGALELFRLMPSR----N 202
+ K G L A +L+DEM R + T+++++ G +D A +F LM S+ N
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
VV+++T+I G+ K K+ E+ + LF M + ++ N VT +++
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTYTTLI---------------- 440
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC 322
+GFF+ C + + ++ +G N+ ++N ++ GL +GK
Sbjct: 441 -----HGFFQA-----------RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 323 GKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGC 382
KA+ +++ + R PD T+ ++ G VE G +F ++ + P + Y
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNT 543
Query: 383 MVDLLGRAGKLREAYEVIQTM----PMKPDSVIWGTLLGACSFHGNVEL-AEIAAE 433
M+ R G EA +++ M P+ P+S + TL+ A G+ E AE+ E
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKE 598
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 170/444 (38%), Gaps = 85/444 (19%)
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
P ++ +NKLL A SL QM+ LG S + Y
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELV-ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR--------------- 170
+ A +K G+ PD+ ++LL+ Y + A L D+M
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 171 ------------------------EVPTWNAMMAGHARFGDVDGALELFRLMP----SRN 202
++ T+ ++ G + GD+D AL L + M +
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 257
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
VV + T+I G K K + AL LF M+ + I P+ T +S++ N G R+
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMD-NKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR---NLCSWNSMIMGLAVH 319
+ + N+ +A+++ + K G + A ++++E+ ++ +++S+I G +H
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMK----------- 368
+ +A +++ M+ + P+ VT+ L+ VE+G +F+ M
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 369 -----------------------TDFNIIPKLEHYGCMVDLLGRAGKLREA---YEVIQT 402
+ P + Y ++D L + GKL +A +E +Q
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 403 MPMKPDSVIWGTLLGACSFHGNVE 426
M+PD + ++ G VE
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVE 520
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 110/246 (44%), Gaps = 12/246 (4%)
Query: 188 VDGALELFRLM----PSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
VD A++LF M P ++V + ++S +K ++E + L +M+ I + T +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ-TLGISHDLYTYS 122
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN---EI 300
+ L + V A K G+ ++ +++L Y I A + + E+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 301 GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKG 360
G + ++ ++I GL +H K +A+ L DQM++ G PD VT+ ++ G ++
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 361 RHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLG 417
+ K M+ I + Y ++D L + + +A + M ++PD + +L+
Sbjct: 243 LSLLKKMEKG-KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 418 ACSFHG 423
+G
Sbjct: 302 CLCNYG 307
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 138/305 (45%), Gaps = 16/305 (5%)
Query: 138 APDVFAATALLDMYAKVGTLELARRLFDEMPVRE----VPTWNAMMAGHARFGDVDGALE 193
+PDV +L G L+ A + D M R+ V T+ ++ R V A++
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 194 LFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPAC 249
L M R +VV++ +++G K + ++A+ FL PN +T IL +
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK-FLNDMPSSGCQPNVITHNIILRSM 319
Query: 250 ANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNL 306
+ G +++ A + GF ++ N ++ + G + A + ++ G N
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
S+N ++ G K +A+E ++M+ G PD VT+ +L A G VE I
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGTLLGACSFHG 423
+ + P L Y ++D L +AGK +A +++ M +KPD++ + +L+G S G
Sbjct: 440 LSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Query: 424 NVELA 428
V+ A
Sbjct: 499 KVDEA 503
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 138/307 (44%), Gaps = 22/307 (7%)
Query: 129 HAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEM----PVREVPTWNAMMAGHAR 184
H + S FA + + L + G LE + + M V ++ ++ G R
Sbjct: 90 HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 185 FGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAV 240
G A ++ ++ +V+++ MISGY K + AL + RM + P+ V
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS----VSPDVV 205
Query: 241 TLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI 300
T +IL + + G L+ V + + ++ ++E + + A ++ +E+
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 301 ---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA-CTHGGM 356
G ++ ++N ++ G+ G+ +A++ + M G P+ +T +L + C+ G
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 357 VEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPM---KPDSVIWG 413
++ + + ++ F+ P + + +++ L R G L A ++++ MP +P+S+ +
Sbjct: 326 MDAEKLLADMLRKGFS--PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 414 TLL-GAC 419
LL G C
Sbjct: 384 PLLHGFC 390
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 116/254 (45%), Gaps = 12/254 (4%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP----TWNAMMA 180
+ L A ++ GF+P V L++ + G L A + ++MP ++N ++
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 181 GHARFGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIM 236
G + +D A+E M SR ++V++ TM++ K+ + E A+ + ++ +
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS-SKGCS 446
Query: 237 PNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRV 296
P +T +++ A G ++ R + ++++ ++ G +D A +
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 297 FNE---IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTH 353
F+E +G N ++NS+++GL + +A++ M+ G P++ ++ L+ +
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 354 GGMVEKGRHIFKSM 367
GM ++ + +
Sbjct: 567 EGMAKEALELLNEL 580
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 16/242 (6%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAM---MAGHARFGDV 188
G PDV L++ K G L+ A + ++MP V T N + M R+ D
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 189 DGAL-ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
+ L ++ R S +VV++ +I+ + +A+ + +M + PN+++ +L
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-QHGCQPNSLSYNPLLH 387
Query: 248 ACANLGALEIGQRVEAYAR--KNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GS 302
++ + +E R G + ++ N +L K G ++ A + N++ G
Sbjct: 388 GFCKEKKMD--RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
L ++N++I GLA GK GKA++L D+M + PD +T+ L+ + G V++
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 363 IF 364
F
Sbjct: 506 FF 507
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVDGA 191
G P+ + LL + K ++ A + M R ++ T+N M+ + G V+ A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 192 LELFRLMPSRN----VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
+E+ + S+ ++++ T+I G +K + KA+ L M +D+ P+ +T +S++
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR-AKDLKPDTITYSSLVG 492
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVA--WRVFN-EIGSLR 304
+ G ++ + + G N N+++ K D A + VF G
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREG 336
N S+ +I GLA G +ALEL +++ +G
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNELCNKG 584
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 34/333 (10%)
Query: 127 MLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVRE------VPTWNAMMA 180
+L + G DV+ T ++D + K G +E AR+ F+EM RE V T+ A++
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIH 561
Query: 181 GHARFGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI- 235
+ + V A ELF M S N+V+++ +I G+ K Q EKA +F RM +D+
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 236 --------------MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVL 281
PN VT ++L +E +++ G N V +A++
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 282 EMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTT 338
+ K G +D A V E+ G L +++S+I + A ++ +ML
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 339 PDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYE 398
P+ V + ++ G ++ + + M+ P + Y M+D G GK+ E
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK-GCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 399 VIQTMPMK---PDSVIWGTLLGACSFHGNVELA 428
+++ M K P+ V + L+ C +G +++A
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 128/298 (42%), Gaps = 69/298 (23%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEM----PVREVPTWNAMMAGHARFGDVDGA 191
G P+V TAL+ Y K + A LF+ M + + T++A++ GH + G V+ A
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 192 LELF-RLMPSR-------------------NVVSWTTMISGYSKNKQYEKALGLF--LRM 229
++F R+ S+ NVV++ ++ G+ K+ + E+A L + M
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 230 E-CEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCG 288
E CE PN + +++ +G L+ Q V+ ++GF LY +++++ Y K
Sbjct: 668 EGCE----PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 289 HIDVAWRVFN--------------------------------------EIGSLRNLCSWN 310
D+A +V + E G N+ ++
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 311 SMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMK 368
+MI G + GK LEL ++M +G P+ VT+ L+ C G ++ ++ + MK
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 128/294 (43%), Gaps = 27/294 (9%)
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
NV S+T + K YEKA + M + +P+ T + +L N +E+ +
Sbjct: 450 NVSSFTRCLCSAGK---YEKAFSVIREM-IGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE---IGSLRNLCSWNSMIMGLAV 318
++ G ++Y +++ + K G I+ A + FNE +G N+ ++ ++I
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM----------- 367
K A EL++ ML EG P+ VT+ L+ G VEK IF+ M
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 368 ----KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPM---KPDSVIWGTLL-GAC 419
D + P + YG ++D ++ ++ EA +++ M M +P+ +++ L+ G C
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 420 SFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAK-LRKVMKGS 472
E E+ E P Y L + Y + D +K L K+++ S
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 32/324 (9%)
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAGHARFGDV 188
I GF PD + +L+ +ELA LF+EM V +V T+ M+ + G +
Sbjct: 475 IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLI 534
Query: 189 DGALELFRLMP----SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
+ A + F M + NVV++T +I Y K K+ A LF M E +PN VT ++
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM-LSEGCLPNIVTYSA 593
Query: 245 ILPACANLGALE----IGQR---------VEAYARK---NGFFKNLYVSNAVLEMYAKCG 288
++ G +E I +R V+ Y ++ N N+ A+L+ + K
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 289 HIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFV 345
++ A ++ + + G N ++++I GL GK +A E+ +M G T+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 346 GLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPM 405
L+ + + M + + P + Y M+D L + GK EAY+++Q M
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLEN-SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 406 K---PDSVIWGTLLGACSFHGNVE 426
K P+ V + ++ G +E
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIE 796
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 140/358 (39%), Gaps = 58/358 (16%)
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
+ V +T +ISG + +E+A+ RM +PN VT +++L C N L +RV
Sbjct: 301 DTVFYTKLISGLCEASLFEEAMDFLNRMR-ATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 262 EAYARKNGFFKNLYVSNAVLEMYA----------------KCGH---------------- 289
G + + + N+++ Y KCGH
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 290 ---------IDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGT 337
+D+A + ++E+ G + N + +S L GK KA + +M+ +G
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 338 TPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREA- 396
PD T+ +L + +E +F+ MK ++ + Y MVD +AG + +A
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG-GLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 397 --YEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYA 454
+ ++ + P+ V + L+ A V A E++ + G L NI
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS-----EG---CLPNIVT 590
Query: 455 SADQWDGVAKLRKVMKGSQI-TKSAGHSFLEEGGQLHKFIVEDRSHPKSNEIFALLDG 511
+ DG K +V K QI + G + + K ++ P ALLDG
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 648
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 16/310 (5%)
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDV 188
+K G+ PD L+ G + A L D M +V T+N+++ G R GD
Sbjct: 150 MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDT 209
Query: 189 DGALELFRLMPSRN----VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
AL+L R M RN V +++T+I ++ + A+ LF ME + I + VT S
Sbjct: 210 SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME-TKGIKSSVVTYNS 268
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---G 301
++ G G + N+ N +L+++ K G + A ++ E+ G
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
N+ ++N+++ G + + +A + D M+R +PD VTF L+ V+ G
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGA 418
+F+++ + ++ Y +V ++GK++ A E+ Q M + PD + +G LL
Sbjct: 389 KVFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 419 CSFHGNVELA 428
+G +E A
Sbjct: 448 LCDNGKLEKA 457
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 160/392 (40%), Gaps = 57/392 (14%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
+S+ ++ LG+ P+ +L +++G PDV ++++
Sbjct: 143 YSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Query: 151 YAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGALELFRLMPSR----N 202
+ G LA L +M R V T++ ++ R G +D A+ LF+ M ++ +
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 262
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
VV++ +++ G K ++ L L+ +I+PN +T +L G L+ +
Sbjct: 263 VVTYNSLVRGLCKAGKWNDG-ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 263 AYARKNGFFKNLYVSNAVLEMYA------------------KCG---------------- 288
G N+ N +++ Y KC
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 289 -HIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTF 344
+D +VF I G + N +++ ++ G GK A EL+ +M+ G PD +T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 345 VGLLLACTHGGMVEKGRHIFKSM---KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQ 401
LL G +EK IF+ + K D I+ Y +++ + + GK+ +A+ +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFC 497
Query: 402 TMP---MKPDSVIWGTLLGACSFHGNVELAEI 430
++P +KP+ + + ++ G++ A I
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 41/303 (13%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVPTWNAMMAGHAR 184
G +L + P+V LLD++ K G L+ A L+ EM R +
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI------------ 329
Query: 185 FGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKA---LGLFLRMECEEDIMPNAVT 241
S N++++ T++ GY + +A L L +R +C DI VT
Sbjct: 330 ---------------SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI----VT 370
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI- 300
S++ + ++ G +V K G N + +++ + + G I +A +F E+
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 301 --GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVE 358
G L ++ ++ ++ GL +GK KALE+++ + + V + ++ GG VE
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 359 KGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTL 415
++F S+ + P + Y M+ L + G L EA +++ M P+ + TL
Sbjct: 491 DAWNLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 416 LGA 418
+ A
Sbjct: 550 IRA 552
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 116/254 (45%), Gaps = 14/254 (5%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR-----EVPTWNAMMAGH 182
L+ I G +P++ L+D Y L A + D M VR ++ T+ +++ G+
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM-VRNKCSPDIVTFTSLIKGY 378
Query: 183 ARFGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPN 238
VD +++FR + R N V+++ ++ G+ ++ + + A LF M ++P+
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM-VSHGVLPD 437
Query: 239 AVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN 298
+T +L + G LE + +K+ + + ++E K G ++ AW +F
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 299 EI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
+ G N+ ++ MI GL G +A L +M +G P+D T+ L+ A G
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Query: 356 MVEKGRHIFKSMKT 369
+ + + MK+
Sbjct: 558 DLTASAKLIEEMKS 571
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 268 NGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL---RNLCSWNSMIMGLAVHGKCGK 324
NG N+Y N ++ + +C A+ V ++ L + ++N++I GL + GK +
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMV 384
A+ L D+M+ G PD VT+ ++ G + + M+ + N+ + Y ++
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME-ERNVKADVFTYSTII 235
Query: 385 DLLGRAGKLREA---YEVIQTMPMKPDSVIWGTLL-GAC 419
D L R G + A ++ ++T +K V + +L+ G C
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 15/240 (6%)
Query: 174 TWNAMMAGHAR---FGDVDGAL-ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRM 229
T+ M+ R FG+++ L E+ R N V++ +I Y + ++A+ +F +M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 230 ECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGH 289
+ E P+ VT +++ A G L+I + ++ G + + + ++ K GH
Sbjct: 421 Q-EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 290 IDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGK---ALELYDQMLREGTTPDDVT 343
+ A R+F E+ G NL ++N MI A+H K AL+LY M G PD VT
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMI---ALHAKARNYETALKLYRDMQNAGFQPDKVT 536
Query: 344 FVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
+ ++ H G +E+ +F M+ N +P YG +VDL G+AG + +A++ Q M
Sbjct: 537 YSIVMEVLGHCGFLEEAEGVFAEMQRK-NWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM 595
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 44/295 (14%)
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
PN+ YN+L+ +Y ++++QM+ G P++
Sbjct: 392 PNTVT--YNRLIHSYGRANYLKE-AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA 448
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAG 181
++ ++G +PD F + +++ K G L A RLF EM + T+N M+A
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIAL 508
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
HA K + YE AL L+ M+ P+ VT
Sbjct: 509 HA-------------------------------KARNYETALKLYRDMQ-NAGFQPDKVT 536
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN--- 298
+ ++ + G LE + V A ++ + + V +++++ K G++D AW+ +
Sbjct: 537 YSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAML 596
Query: 299 EIGSLRNLCSWNSMIMG-LAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
+ G N+ + NS++ L VH + +A L ML G P T+ LL CT
Sbjct: 597 QAGLRPNVPTCNSLLSTFLRVH-RMSEAYNLLQSMLALGLHPSLQTYTLLLSCCT 650
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 157/353 (44%), Gaps = 27/353 (7%)
Query: 30 IHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXX 89
++G+ R + +L++K++EI + P+ + YN ++ +
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEI----------GYKPD--IVAYNAIIDSLCKTKRVNDA 209
Query: 90 CFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLD 149
F + ++ G PN L + IK P+V +ALLD
Sbjct: 210 -FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 150 MYAKVGTLELARRLFDEMPVR-----EVPTWNAMMAGHARFGDVDGALELFRLMPSR--- 201
+ K G + A+ LF+EM VR ++ T+++++ G +D A ++F LM S+
Sbjct: 269 AFVKNGKVLEAKELFEEM-VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 202 -NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQR 260
+VVS+ T+I+G+ K K+ E + LF M + ++ N VT +++ G ++ Q
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMS-QRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 261 VEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR---NLCSWNSMIMGLA 317
+ G +++ N +L G ++ A +F ++ ++ ++ ++I G+
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 318 VHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTD 370
GK +A L+ + +G PD VT+ ++ G++ + ++ MK +
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 157/349 (44%), Gaps = 25/349 (7%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
S+ +M LG+ P++ L ++ G+ PD+ A A++D
Sbjct: 140 LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Query: 151 YAKVGTLELARRLFDEMPVR----EVPTWNAMMAG---HARFGDVDGAL-ELFRLMPSRN 202
K + A F E+ + V T+ A++ G +R+ D L ++ + + N
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA-CANLGALEIGQRV 261
V++++ ++ + KN + +A LF M I P+ VT +S++ C + E Q
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEM-VRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAV 318
+ K G ++ N ++ + K ++ ++F E+ G + N ++N++I G
Sbjct: 319 DLMVSK-GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKT---DFNIIP 375
G KA E + QM G +PD T+ LL G +EK IF+ M+ D +I+
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 376 KLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLL-GACS 420
Y ++ + + GK+ EA+ + ++ +KPD V + T++ G C+
Sbjct: 438 ----YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 173/423 (40%), Gaps = 58/423 (13%)
Query: 29 QIHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXX 88
+ G LR + +T+ KL + +L ++ P ++ +N+LL A
Sbjct: 46 SVSGGDLRERLSKTRLRDIKLNDAIDLF--SDMVKSRPFPSIVDFNRLLSAIVKLKKYDV 103
Query: 89 XCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALL 148
SL +M +LG + Y + +K G+ PD +L+
Sbjct: 104 V-ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLV 162
Query: 149 DMYAKVGTLELARRLFDEM------PVREVPTWNAMMAGHARFGDVDGALELFRLMPSR- 201
+ + + + A L D+M P ++ +NA++ + V+ A + F+ + +
Sbjct: 163 NGFCRRNRVSDAVSLVDKMVEIGYKP--DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 202 ---NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIG 258
NVV++T +++G + ++ A L M ++ I PN +T +++L A
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALLDA---------- 269
Query: 259 QRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR---NLCSWNSMIMG 315
F KN G + A +F E+ + ++ +++S+I G
Sbjct: 270 -----------FVKN--------------GKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 316 LAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIP 375
L +H + +A +++D M+ +G D V++ L+ VE G +F+ M + ++
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVS 363
Query: 376 KLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGACSFHGNVELAEIAA 432
Y ++ +AG + +A E M + PD + LLG +G +E A +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 433 ESL 435
E +
Sbjct: 424 EDM 426
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 120/249 (48%), Gaps = 12/249 (4%)
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDV 188
+K P+V TAL+D + K G L AR L+ EM R V T+N+++ G G +
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 189 DGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
A +F LM S+ +VV++ T+I+G+ K+K+ E + LF M + ++ +A T +
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT-YQGLVGDAFTYNT 364
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR 304
++ G L + Q+V G ++ N +L+ G I+ A + ++
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 305 ---NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
++ ++N +I GL K +A L+ + R+G PD + ++ ++ G+ +
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 362 HIFKSMKTD 370
+ + MK D
Sbjct: 485 KLCRRMKED 493
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 147/349 (42%), Gaps = 35/349 (10%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
LY +M LG S + Y L +K GF P + +LL+ +
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 153 KVGTLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVVSWTTMISG 212
+ + A L D M DG F +P NVV + T+I+G
Sbjct: 161 QGNRFQEAVSLVDSM---------------------DG----FGFVP--NVVIYNTVING 193
Query: 213 YSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFK 272
KN+ AL +F ME ++ I +AVT +++ +N G R+ K
Sbjct: 194 LCKNRDLNNALEVFYCME-KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 273 NLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELY 329
N+ A+++ + K G++ A ++ E+ + N+ ++NS+I G +HG G A ++
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 330 DQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGR 389
D M+ +G PD VT+ L+ VE G +F M T ++ Y ++ +
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-TYQGLVGDAFTYNTLIHGYCQ 371
Query: 390 AGKLREAYEVIQTMP---MKPDSVIWGTLLGACSFHGNVELAEIAAESL 435
AGKL A +V M + PD V + LL +G +E A + E L
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 147/334 (44%), Gaps = 18/334 (5%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
SL+ QM G P+ L K PDV AL+D
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 151 YAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGALELFRLMPSR----N 202
+ K G A L++EM + T+ +++ G G VD A ++F LM ++ +
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
VV++T++I+G+ K K+ + A+ +F M ++ + N +T +++ +G + Q V
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMS-QKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI------GSLRNLCSWNSMIMGL 316
++ G N+ N +L G + A +F ++ G N+ ++N ++ GL
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 317 AVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPK 376
+GK KAL +++ M + +T+ ++ G V+ ++F S+ + + P
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK-GVKPN 494
Query: 377 LEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSV 410
+ Y M+ L R G EA+ + + MK D V
Sbjct: 495 VVTYTTMISGLFREGLKHEAHVLFR--KMKEDGV 526
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 142/324 (43%), Gaps = 27/324 (8%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP----TWNAMMAGHA 183
L H ++S P + T LL++ AK+ ++ L D + + V T N +M
Sbjct: 59 LFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFC 118
Query: 184 RFGDVDGAL----ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNA 239
+ A ++ +L ++V++T++I+G+ + E+A+ + +M E I P+
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM-VEMGIKPDV 177
Query: 240 VTLASILPACANLG----ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGH---IDV 292
V +I+ + G AL + ++E Y G ++ + +++ G D
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENY----GIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 293 AWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
R + ++ ++N++I GK A ELY++M+R P+ T+ L+
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDS 409
G V++ R +F M+T P + Y +++ + K+ +A ++ M K ++
Sbjct: 294 MEGCVDEARQMFYLMETK-GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 410 VIWGTLLGACSFHGNVELAEIAAE 433
+ + TL+ G V +A E
Sbjct: 353 ITYTTLIQG---FGQVGKPNVAQE 373
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 35/343 (10%)
Query: 131 HFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP---TWNAMMAGHARFGD 187
++ G P ++ +Y G L L M + P T+N +++ H + D
Sbjct: 323 RMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNND 382
Query: 188 VDGALELFRLMPSRNV----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLA 243
++ A F+ M + VS+ T++ +S E+A GL M+ ++++ + T +
Sbjct: 383 IERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMD-DDNVEIDEYTQS 441
Query: 244 SILPACANLGALEIGQRVEAYARKNGFFKNLYVS--------NAVLEMYAKCGHIDVAWR 295
++ LE + +FK +V+ +A ++ Y + G++ A R
Sbjct: 442 ALTRMYVEAEMLE---------KSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAER 492
Query: 296 VF---NEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
VF E+ R + +N MI + C KA EL++ M+ G TPD T+ L+
Sbjct: 493 VFICCQEVNK-RTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILA 551
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM---PMKPDS 409
M KGR + M+ + + Y ++ + G+L A EV + M ++PD
Sbjct: 552 SADMPHKGRCYLEKMR-ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDV 610
Query: 410 VIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNI 452
V++G L+ A + GNV+ A E++ E PGN VI +++
Sbjct: 611 VVYGVLINAFADTGNVQQAMSYVEAM--KEAGIPGNSVIYNSL 651
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 127/305 (41%), Gaps = 15/305 (4%)
Query: 69 TVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQML 128
TV YN +++AY C L+ M G +P++ G+
Sbjct: 504 TVIEYNVMIKAYGISKSCEKAC-ELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY 562
Query: 129 HAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHAR 184
++G+ D A++ + K+G L +A ++ EM +V + ++ A
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 185 FGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRM--ECEEDIMPN 238
G+V A+ M N V + ++I Y+K ++A ++ ++ C + P+
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 239 AVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN 298
T ++ + + + + ++ G N + +L MY K G + A ++
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRGE-ANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 299 EIGSLRNLC---SWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
++ ++ L S+NS++ A+ G+ +A+E + +M+ G PDD TF L G
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Query: 356 MVEKG 360
M +K
Sbjct: 802 MSKKA 806
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 121/301 (40%), Gaps = 12/301 (3%)
Query: 140 DVFAATALLDMYAKVGTLELARRLFDEMPVR---EVPTWNAMMAGHARFGDVDGALELF- 195
D + +AL MY + LE + F V ++A + + G + A +F
Sbjct: 436 DEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFI 495
Query: 196 --RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLG 253
+ + R V+ + MI Y +K EKA LF M + P+ T +++ A+
Sbjct: 496 CCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESM-MSYGVTPDKCTYNTLVQILASAD 554
Query: 254 ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR---NLCSWN 310
G+ R+ G+ + AV+ + K G +++A V+ E+ ++ +
Sbjct: 555 MPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYG 614
Query: 311 SMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTD 370
+I A G +A+ + M G + V + L+ T G +++ I++ +
Sbjct: 615 VLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS 674
Query: 371 FNII--PKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
N P + CM++L +R+A + +M + ++ + + C + N
Sbjct: 675 CNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFE 734
Query: 429 E 429
E
Sbjct: 735 E 735
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 14/175 (8%)
Query: 267 KNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN-----LC----SWNSMIMGLA 317
K G + + VL+MY K A F + N +C ++N+MI
Sbjct: 250 KIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYG 309
Query: 318 VHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKL 377
G+ +A E + +ML EG P VTF ++ + G + + + K+MK + P
Sbjct: 310 KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK--LHCAPDT 367
Query: 378 EHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGACSFHGNVELAE 429
Y ++ L + + A + M +KPD V + TLL A S VE AE
Sbjct: 368 RTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAE 422
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 13/253 (5%)
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVD 189
K PDVF AL+D K G + A ++EM R ++ T++ ++ G + +D
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 190 GALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
A E+F M S+ +VV+++ +I+GY K+K+ E + LF M + ++ N VT +
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS-QRGVVRNTVTYTIL 367
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GS 302
+ G L + + + G N+ N +L G I+ A + ++ G
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
++ ++N +I G+ G+ A ++Y + +G PD T+ ++L G+ +
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADA 487
Query: 363 IFKSMKTDFNIIP 375
+F+ MK D I+P
Sbjct: 488 LFRKMKED-GILP 499
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 148/373 (39%), Gaps = 51/373 (13%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
L+ QM++LG N IK G P + +LL+ +
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 153 KVGTLELARRLFDEMP----VREVPTWNAMMAGHARFGDVDGALELFRLMPSR----NVV 204
+ + A +FD+M V +N ++ G + VD AL+L M +VV
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGA---------- 254
++ ++ISG + ++ A + M + +I P+ T +++ AC G
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMT-KREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 255 -------------------------LEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGH 289
L+ + + + G F ++ + ++ Y K
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 290 IDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVG 346
++ ++F E+ G +RN ++ +I G GK A E++ +M+ G P+ +T+
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 347 LLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEV---IQTM 403
LL G +EK I M+ + + + Y ++ + +AG++ +A+++ +
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKN-GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 404 PMKPDSVIWGTLL 416
+ PD + T++
Sbjct: 461 GLMPDIWTYTTMM 473
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 140/344 (40%), Gaps = 54/344 (15%)
Query: 175 WNAMMAGHARFGDVDGALELF----RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRME 230
+ M+ RF +D +L+LF + P ++ ++ ++S SK K+Y+ + L+ +M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 231 --------CEEDIMPNAVTLASILP-ACANLGAL----------EIGQRVEAYARKN--- 268
C +I+ N S L A + LG + G + + R +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 269 ------------GFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMI 313
G+ N+ + N +++ K +D A + N + G ++ ++NS+I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 314 MGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNI 373
GL G+ A + M + PD TF L+ AC G V + ++ M ++
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM-IRRSL 287
Query: 374 IPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLL-GACSF----HGNV 425
P + Y ++ L +L EA E+ M K PD V + L+ G C HG
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 426 ELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRKVM 469
E++ + RN Y IL Y A + + ++ + M
Sbjct: 348 LFCEMSQRGVV----RNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 145/322 (45%), Gaps = 17/322 (5%)
Query: 130 AHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPV----REVPTWNAMMAGHARF 185
+ +++G PD F T+L+ Y + L+ A ++F+EMP+ R + ++ G
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 186 GDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+D A++LF M V ++T +I +++ +AL L ME E I PN T
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME-ETGIKPNIHT 360
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
++ + + E + + + G N+ NA++ Y K G I+ A V +
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 302 SLR---NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVE 358
S + N ++N +I G KA+ + ++ML PD VT+ L+ G +
Sbjct: 421 SRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 359 KGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTL 415
+ S+ D ++P Y M+D L ++ ++ EA ++ ++ K P+ V++ L
Sbjct: 480 SAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 416 LGACSFHGNVELAEIAAESLFT 437
+ G V+ A + E + +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLS 560
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 146/340 (42%), Gaps = 17/340 (5%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
+L +M G PN + + L ++ G P+V AL++
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 151 YAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGALELFRLMPSR----N 202
Y K G +E A + + M R++ T+N ++ G+ + +V A+ + M R +
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPD 461
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
VV++ ++I G ++ ++ A L M + ++P+ T S++ + +E +
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMN-DRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS---LRNLCSWNSMIMGLAVH 319
+ G N+ + A+++ Y K G +D A + ++ S L N ++N++I GL
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
GK +A L ++M++ G P T L+ G + F+ M + P
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHT 639
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLL 416
Y + R G+L +A +++ M + PD + +L+
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 147/390 (37%), Gaps = 49/390 (12%)
Query: 54 NLHYAQAVLHHSPNSTVF----LYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXX 109
N+H A VL+ V YN L+ + L S M G P+Q+
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA-YRLLSLMNDRGLVPDQWTY 500
Query: 110 XXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPV 169
L + G P+V TAL+D Y K G ++ A + ++M
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 170 RE-VP---TWNAMMAGHARFGDVDGAL----ELFRLMPSRNVVSWTTMISGYSKNKQYEK 221
+ +P T+NA++ G G + A ++ ++ V + T +I K+ ++
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 222 ALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVL 281
A F +M P+A T + + G L + + A R+NG +L+ ++++
Sbjct: 621 AYSRFQQM-LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 282 EMYAKCGHIDVAWRVFNEI----------------------------GSLRNLCSWNSMI 313
+ Y G + A+ V + GS LC+ ++M+
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 314 MGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNI 373
+ +EL ++M+ TP+ ++ L+L G + +F M+ + I
Sbjct: 740 -------EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 374 IPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
P + ++ + K EA +V+ M
Sbjct: 793 SPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 132/302 (43%), Gaps = 11/302 (3%)
Query: 193 ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANL 252
E F L + + T+++ ++ ++ +++ M E+ + PN T ++ L
Sbjct: 173 ERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEM-LEDKVCPNIYTYNKMVNGYCKL 231
Query: 253 GALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSW 309
G +E + + + G + + +++ Y + +D A++VFNE+ G RN ++
Sbjct: 232 GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY 291
Query: 310 NSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKT 369
+I GL V + +A++L+ +M + P T+ L+ + + ++ K M+
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME- 350
Query: 370 DFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLLGACSFHGNVE 426
+ I P + Y ++D L K +A E++ M K P+ + + L+ G +E
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 427 LAEIAAESLFT--LEPRNPGNYVILSNIYASADQWDGVAKLRKVMKGSQITKSAGHSFLE 484
A E + + L P N Y L Y ++ + L K+++ + ++ L
Sbjct: 411 DAVDVVELMESRKLSP-NTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 485 EG 486
+G
Sbjct: 470 DG 471
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 172/422 (40%), Gaps = 42/422 (9%)
Query: 30 IHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXX 89
I G+ ID TL +K+ L PN V YN L+ Y
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCL----------PN--VVTYNTLIDGYCKLRKIDDG 259
Query: 90 CFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFI-----KSGFAPDVFAA 144
F L M L G PN G+M F+ + G++ D
Sbjct: 260 -FKLLRSMALKGLEPN-----LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 145 TALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAGHARFGDVDGALELFRLMPS 200
L+ Y K G A + EM V T+ +++ + G+++ A+E M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 201 R----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALE 256
R N ++TT++ G+S+ K Y LR + P+ VT +++ G +E
Sbjct: 374 RGLCPNERTYTTLVDGFSQ-KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 257 IGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMI 313
V ++ G ++ + VL + + +D A RV E+ G + +++S+I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 314 MGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNI 373
G + +A +LY++MLR G PD+ T+ L+ A G +EK + M + +
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM-VEKGV 551
Query: 374 IPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLLGACSFHGNVELAEI 430
+P + Y +++ L + + REA ++ + + P V + TL+ CS N+E +
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS---NIEFKSV 608
Query: 431 AA 432
+
Sbjct: 609 VS 610
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 145/345 (42%), Gaps = 51/345 (14%)
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDV 188
++S +P+VF L+ + G +++A LFD+M + V T+N ++ G+ + +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 189 DGALELFRLMP---------SRNV------------------------------VSWTTM 209
D +L R M S NV V++ T+
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 210 ISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNG 269
I GY K + +AL + M + P+ +T S++ + G + R G
Sbjct: 317 IKGYCKEGNFHQALVMHAEM-LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 270 FFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKAL 326
N +++ +++ G+++ A+RV E+ G ++ ++N++I G V GK A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 327 ELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDL 386
+ + M +G +PD V++ +L V++ + + M + I P Y ++
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM-VEKGIKPDTITYSSLIQG 494
Query: 387 LGRAGKLREA---YEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+ +EA YE + + + PD + L+ A G++E A
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCG-HIDVAWRVFNEIGSL 303
++ + + L ++ + A+ +GF + NAVL+ + +I A VF E+
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 304 R---NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKG 360
+ N+ ++N +I G G AL L+D+M +G P+ VT+ L+ ++ G
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 361 RHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKP---DSVIWGTLLG 417
+ +SM + P L Y +++ L R G+++E V+ M + D V + TL+
Sbjct: 260 FKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 418 ACSFHGNVELA 428
GN A
Sbjct: 319 GYCKEGNFHQA 329
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 159/348 (45%), Gaps = 55/348 (15%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVRE----VPTWNAMMAGHA 183
+ + +GF +V+ L++ + K G + A+++FDE+ R V ++N ++ G+
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 184 RFGDVDGALELFRLM-PSR---NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNA 239
+ G++D L M SR +V +++ +I+ K + + A GLF M C+ ++PN
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM-CKRGLIPND 345
Query: 240 VTLASILPACANLGALEIGQRVEAYARK----------------NGFFKN---LYVSNAV 280
V +++ + G +++ + E+Y + NGF KN + N V
Sbjct: 346 VIFTTLIHGHSRNGEIDLMK--ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 281 ------------------LEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVH 319
++ + + G ++ A + E+ G + +++++ G+
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G+ A +MLR G PDDVT+ ++ A G + G + K M++D + +P +
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH-VPSVVT 522
Query: 380 YGCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGTLLGACSFHGN 424
Y +++ L + G+++ A ++ M + PD + + TLL H N
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 10/214 (4%)
Query: 269 GFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG--SLR-NLCSWNSMIMGLAVHGKCGKA 325
GF N+YV N ++ + K G+I A +VF+EI SL+ + S+N++I G G +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 326 LELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVD 385
L QM + T PD T+ L+ A ++ +F M +IP + ++
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM-CKRGLIPNDVIFTTLIH 353
Query: 386 LLGRAGK---LREAYEVIQTMPMKPDSVIWGTLLGACSFHGNVELAEIAAESLFT--LEP 440
R G+ ++E+Y+ + + ++PD V++ TL+ +G++ A + + L P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 441 RNPGNYVILSNIYASADQWDGVAKLRKVMKGSQI 474
+ Y L + + + ++RK M + I
Sbjct: 414 -DKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 12/230 (5%)
Query: 125 GQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVRE----VPTWNAMMA 180
+ L+ IK PD+F ++L++ + L+ A+ +F+ M ++ V T+N ++
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 181 GHARFGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIM 236
G + +D +ELFR M R N V++TT+I G+ + + + A +F +M + +
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSDGVH 467
Query: 237 PNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRV 296
PN +T ++L G LE V Y +++ +Y N ++E K G ++ W +
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 297 FNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
F + G ++ +N+MI G G +A L+ +M +G PD T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 47/331 (14%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
+L+++M G PN L + I+ P+V AL+D
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 151 YAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGALELFRLMPSR----N 202
+ K G L A +L+DEM R + T+++++ G +D A +F LM S+ N
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
VV++ T+I+G+ K K+ ++ + LF M + ++ N VT +++
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMS-QRGLVGNTVTYTTLI---------------- 442
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKC 322
+GFF+ C + + ++ G N+ ++N+++ GL +GK
Sbjct: 443 -----HGFFQA-----------RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 323 GKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGC 382
KA+ +++ + R P T+ ++ G VE G +F S+ + P + Y
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIIYNT 545
Query: 383 MVDLLGRAGKLREAYEVIQTM----PMKPDS 409
M+ R G EA + + M P+ PDS
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPL-PDS 575
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 143/359 (39%), Gaps = 48/359 (13%)
Query: 70 VFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLH 129
++ YN L+ + +L +M LG+ P+ L
Sbjct: 120 LYTYNILINCFCRRSQISLA-LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 130 AHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARF 185
++ G+ PD T L+ A L D M R + T+ ++ G +
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 186 GDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
GD+D A L M + NVV ++T+I K + + AL LF ME + + PN +T
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME-NKGVRPNVIT 297
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIG 301
+S++ N R+ + D+ R N
Sbjct: 298 YSSLISCLCNYERWSDASRLLS---------------------------DMIERKINP-- 328
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA-CTHGGMVEKG 360
N+ ++N++I GK +A +LYD+M++ PD T+ L+ C H + ++
Sbjct: 329 ---NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEA 384
Query: 361 RHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLL 416
+H+F+ M + + P + Y +++ +A ++ E E+ + M + ++V + TL+
Sbjct: 385 KHMFELMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 145/349 (41%), Gaps = 48/349 (13%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
+L+++M G P+ + L + ++ P+V +L+D
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 151 YAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGALELFRLMPSRN---- 202
+AK G L A +LFDEM R + T+N+++ G +D A ++F LM S++
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRM-----------------------ECE------- 232
VV++ T+I+G+ K K+ + LF M +C+
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 233 ----EDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCG 288
+ + PN +T ++L G LE V Y +K+ ++Y N + E K G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 289 HIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFV 345
++ W +F + G ++ ++N+MI G G +A L+ +M +G PD T+
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 346 GLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLL--GRAGK 392
L+ A G + K M++ YG + D+L GR K
Sbjct: 560 TLIRAHLRDGDKAASAELIKEMRS-CRFAGDASTYGLVTDMLHDGRLDK 607
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 156/350 (44%), Gaps = 23/350 (6%)
Query: 131 HFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFG 186
++ G+ PD T L+ + A L + M V+ ++ T+ A++ G + G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 187 DVDGALELFRLMPS----RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
+ D AL L M +VV ++T+I K + + AL LF M+ + I P+ T
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD-NKGIRPDVFTY 278
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+S++ N G R+ + + N+ N++++ +AK G + A ++F+E+
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 303 LR---NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEK 359
N+ ++NS+I G +H + +A +++ M+ + PD VT+ L+ V
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 360 GRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLL 416
G +F+ M + ++ Y ++ +A A V + M + P+ + + TLL
Sbjct: 399 GMELFRDM-SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 417 GACSFHGNVELAEIAAESL--FTLEPRNPGNYVILSNIYASA----DQWD 460
+G +E A + E L +EP + Y I+S A D WD
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEP-DIYTYNIMSEGMCKAGKVEDGWD 506
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 123/291 (42%), Gaps = 33/291 (11%)
Query: 218 QYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI----GQRVEAYARKNGFFKN 273
+ ++A+ LF M + P+ V + +L A A + ++ G+++E G N
Sbjct: 45 KLDEAVDLFGEM-VKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEIL----GVSHN 99
Query: 274 LYVSNAVLEMYAKCGHIDVAWRVFNEIGSL---RNLCSWNSMIMGLAVHGKCGKALELYD 330
LY N ++ + + A + ++ L ++ + NS++ G + +A+ L D
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 331 QMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRA 390
QM+ G PD VTF L+ + + + M P L YG +++ L +
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCKR 218
Query: 391 GKLREAYEVIQTM---PMKPDSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPG--- 444
G+ A ++ M ++ D VI+ T++ + + +V+ A +LFT E N G
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD----DALNLFT-EMDNKGIRP 273
Query: 445 ---NYVILSNIYASADQWDGVAKL------RKVMKGSQITKSAGHSFLEEG 486
Y L + + +W ++L RK+ S +F +EG
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 164/387 (42%), Gaps = 51/387 (13%)
Query: 92 SLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMY 151
+L QM ++ + PN L + G PD+F +++
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 152 AKVGTLELARRLFDEMPV----REVPTWNAMMAGHARFGDVDGALELFRLMPSR----NV 203
K G ++LA L +M +V + ++ + +V+ AL LF M ++ NV
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV-- 261
V++ ++I ++ A L M E I PN VT ++++ A G L +++
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 262 EAYARK------------NGF---------------------FKNLYVSNAVLEMYAKCG 288
E R NGF F N+ N +++ + K
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 289 HIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFV 345
++ +F E+ G + N ++N++I GL G C A +++ +M+ +G PD +T+
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 346 GLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPM 405
LL G +EK +F+ ++ + P + Y M++ + +AGK+ + +++ ++ +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 406 ---KPDSVIWGTLLGACSFHGNVELAE 429
KP+ +I+ T++ G E A+
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEAD 555
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/503 (20%), Positives = 197/503 (39%), Gaps = 64/503 (12%)
Query: 61 VLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXX 120
++ P ++ +NKLL A SL +M+ L S + Y
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLV-ISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 121 XXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP------- 173
+ +K G+ PD+ ++LL+ Y + A L D+M V E
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 174 --------------------------------TWNAMMAGHARFGDVDGALELFRLMP-- 199
T+ ++ G + GD+D AL L + M
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 200 --SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
+VV +TT+I K AL LF M+ + I PN VT S++ N G
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR---NLCSWNSMIM 314
R+ + + N+ +A+++ + K G + A ++++E+ ++ +++S+I
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
G +H + +A +++ M+ + P+ VT+ L+ VE+G +F+ M + ++
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLV 427
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGACSFHGNVELAEIA 431
Y ++ L +AG A ++ + M + PD + + LL +G +E A +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 432 AESL--FTLEPRNPGNYVILSNIYASA---DQWDGVAKL-------RKVMKGSQITKSAG 479
E L +EP +++ + + D WD L ++ + I+
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 480 HSFLEEGGQLHKFIVEDRSHPKS 502
EE L + + ED + P S
Sbjct: 548 KGLKEEADALFREMKEDGTLPNS 570
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 105/262 (40%), Gaps = 22/262 (8%)
Query: 30 IHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXX 89
I+G+ + +D+ K + E ++ PN V YN L++ +
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCF----------PN--VVTYNTLIKGFCKAKRVEEG 414
Query: 90 CFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLD 149
L+ +M G N Q + + G PD+ + LLD
Sbjct: 415 -MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 150 MYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVDGALELFRLMPSR---- 201
K G LE A +F+ + ++ T+N M+ G + G V+ +LF + +
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
NV+ +TTMISG+ + E+A LF M+ E+ +PN+ T +++ A G +
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMK-EDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 262 EAYARKNGFFKNLYVSNAVLEM 283
R GF + + V+ M
Sbjct: 593 IKEMRSCGFVGDASTISMVINM 614
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 29/319 (9%)
Query: 139 PDVFAATALLDMYAKVGTLELARRLFDEM------PVREVPTWNAMMAGHARFGDVDGAL 192
PD AL++ + + G A L D+M P R T+N ++ G+ AL
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRS--TYNNLINACGSSGNWREAL 101
Query: 193 ELFRLMPSRNV----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA 248
E+ + M V V+ ++S Y +QY KAL F M+ + + P+ T I+
Sbjct: 102 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK-VRPDTTTFNIIIYC 160
Query: 249 CANLG----ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---G 301
+ LG AL++ + ++ ++ +++ +Y+ G I+ VF + G
Sbjct: 161 LSKLGQSSQALDLFNSMRE--KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG 218
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
N+ S+N+++ AVHG G AL + + + G PD V++ LL + K +
Sbjct: 219 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 278
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGA 418
+F M+ + P + Y ++D G G L EA E+ + M +KP+ V TLL A
Sbjct: 279 EVFLMMRKERR-KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 337
Query: 419 CSFHG---NVELAEIAAES 434
CS NV+ AA+S
Sbjct: 338 CSRSKKKVNVDTVLSAAQS 356
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 112/277 (40%), Gaps = 65/277 (23%)
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLF----DEMPVREVPTWNAMMAGHARFGDVD 189
++G PDV + T LL+ Y + A+ +F E V T+NA++ + G +
Sbjct: 251 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 310
Query: 190 GALELFRLMPSR----NVVSWTTMISGYSKNK---------------------------- 217
A+E+FR M NVVS T+++ S++K
Sbjct: 311 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 370
Query: 218 -------QYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGF 270
+ EKA+ L+ M ++ + ++VT ++ R+ Y +
Sbjct: 371 GSYINAAELEKAIALYQSMR-KKKVKADSVTFTILISGSC---------RMSKYPEAISY 420
Query: 271 FKNLY---------VSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAV 318
K + V ++VL Y+K G + A +FN++ G ++ ++ SM+
Sbjct: 421 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 480
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
K GKA EL+ +M G PD + L+ A GG
Sbjct: 481 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 142/321 (44%), Gaps = 16/321 (4%)
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAG 181
Q+L F+ G PD ++ K + A ++ + M +R + T+ +M G
Sbjct: 273 QLLEEMFLM-GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
+ G VD A +LF +P +V + T+I G+ + + + A + M I+P+ T
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI- 300
S++ G + + V R G N+Y +++ + K G ID A+ V NE+
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 301 --GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVE 358
G N +N +I + +A+E++ +M R+G PD TF L+ ++
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 359 KGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKP---DSVIWGTL 415
+ + M ++ ++ Y +++ R G+++EA +++ M + D + + +L
Sbjct: 512 HALWLLRDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 416 LGACSFHGNVELAEIAAESLF 436
+ G V+ A SLF
Sbjct: 571 IKGLCRAGEVD----KARSLF 587
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 135/295 (45%), Gaps = 16/295 (5%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVDGA 191
G PDV +L+ Y K G + LA + +M + V ++ ++ G + G +D A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 192 LELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
+ M + N V + +IS + K + +A+ +F M + P+ T S++
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP-RKGCKPDVYTFNSLIS 502
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLR 304
+ ++ + G N N ++ + + G I A ++ NE+ GS
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ ++NS+I GL G+ KA L+++MLR+G P +++ L+ GMVE+
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREA---YEVIQTMPMKPDSVIWGTLL 416
K M + P + + +++ L RAG++ + + +Q + PD+V + TL+
Sbjct: 623 KEMVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 133/339 (39%), Gaps = 24/339 (7%)
Query: 30 IHGYTLRTGIDQTKTLIEKLLEIPNLHYAQAVLHHSPNSTVFLYNKLLQAYXXXXXXXXX 89
IHG+ +D K ++ + V + V YN L+ Y
Sbjct: 360 IHGFVTHGRLDDAKAVLSDM-----------VTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 90 CFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLD 149
+ MR G PN Y + G P+ L+
Sbjct: 409 -LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 150 MYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVDGALELFRLMPSR---- 201
+ K + A +F EMP + +V T+N++++G ++ AL L R M S
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 202 NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRV 261
N V++ T+I+ + + + ++A L M + + + +T S++ G ++ + +
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL-DEITYNSLIKGLCRAGEVDKARSL 586
Query: 262 EAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAV 318
++G + N ++ + G ++ A E+ GS ++ ++NS+I GL
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMV 357
G+ L ++ ++ EG PD VTF L+ GG V
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 104/241 (43%), Gaps = 20/241 (8%)
Query: 235 IMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAW 294
I P T ++ A + ++ + K+G N + ++ +KC ++ A
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 295 RVFNE---IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLAC 351
++ E +G + + ++N +I+GL + +A ++ ++ML G PDD+T+ L+
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 352 THGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP----MKP 407
G V+ + +F + P++ + ++ G+L +A V+ M + P
Sbjct: 333 CKIGRVDAAKDLFYRIPK-----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 408 DSVIWGTLLGACSFHGNVELAEIAAESLFTLEPRNPGNYVILSNIYASADQWDGVAKLRK 467
D + +L+ G L +A E L + RN G N+Y+ DG KL K
Sbjct: 388 DVCTYNSLIYGYWKEG---LVGLALEVLHDM--RNKG---CKPNVYSYTILVDGFCKLGK 439
Query: 468 V 468
+
Sbjct: 440 I 440
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 130/289 (44%), Gaps = 12/289 (4%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
L++QM G PN L +K P+V TAL+D +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 153 KVGTLELARRLFD---EMPVR-EVPTWNAMMAGHARFGDVDGALELFRLMPSR----NVV 204
KVG L A+ L++ +M V +V T+ +++ G +G +D A ++F LM N V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 205 SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAY 264
+TT+I G+ K+K+ E + +F M ++ ++ N +T ++ +G ++ Q V
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMS-QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 265 ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR---NLCSWNSMIMGLAVHGK 321
++ N +L+ G ++ A +F + N+ ++ +I G+ GK
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 322 CGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTD 370
A +L+ + +G P+ +T+ ++ G++ + +FK MK D
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 172/428 (40%), Gaps = 62/428 (14%)
Query: 61 VLHHSPNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXX 120
++H P ++ + +LL SL+ QM++LG P
Sbjct: 74 MVHSRPLPSIIDFTRLLSVIAKMNRYDVV-ISLFEQMQILGIPPLLCTCNIVMHCVCLSS 132
Query: 121 XXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEM------------- 167
+K GF PD+ T+LL+ Y +E A LFD++
Sbjct: 133 QPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 168 -PVR-------------------------EVPTWNAMMAGHARFGDVDGALELFRLMPSR 201
+R V T+NA++ G G A L R M R
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Query: 202 ----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
NV+++T +I + K + +A L+ M + + P+ T S++ G L+
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVM-IQMSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIM 314
+++ +NG + N + ++ + K ++ ++F E+ G + N ++ +I
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKT---DF 371
G + G+ A E+++QM PD T+ LL G VEK IF+ M+ D
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Query: 372 NIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGTLLGACSFHGNVELA 428
NI+ Y ++ + + GK+ +A+++ ++ MKP+ + + T++ G +
Sbjct: 432 NIVT----YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH-- 485
Query: 429 EIAAESLF 436
A+SLF
Sbjct: 486 --EADSLF 491
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 134/302 (44%), Gaps = 32/302 (10%)
Query: 189 DGALELFRLM----PSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
+ AL+LF M P +++ +T ++S +K +Y+ + LF +M+ +P + +
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG--IPPLLCTCN 122
Query: 245 ILPACANLGALEIGQRVEAY---ARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI- 300
I+ C L + R + K GF +L ++L Y I+ A +F++I
Sbjct: 123 IVMHCVCLSSQPC--RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 301 --GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVE 358
G N+ ++ ++I L + A+EL++QM G+ P+ VT+ L+ G
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 359 KGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREA---YEVIQTMPMKPDSVIWGTL 415
+ + M I P + + ++D + GKL EA Y V+ M + PD +G+L
Sbjct: 241 DAAWLLRDMMKR-RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 416 LGACSFHGNVELAEIAAESLFTLEPRN---PGNYVILSNIYASADQWDGVAKLRKVMKGS 472
+ +G ++ A +F L RN P + + I+ G K ++V G
Sbjct: 300 INGLCMYGLLD----EARQMFYLMERNGCYPNEVIYTTLIH-------GFCKSKRVEDGM 348
Query: 473 QI 474
+I
Sbjct: 349 KI 350
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 29/319 (9%)
Query: 139 PDVFAATALLDMYAKVGTLELARRLFDEM------PVREVPTWNAMMAGHARFGDVDGAL 192
PD AL++ + + G A L D+M P R T+N ++ G+ AL
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRS--TYNNLINACGSSGNWREAL 233
Query: 193 ELFRLMPSRNV----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPA 248
E+ + M V V+ ++S Y +QY KAL F M+ + + P+ T I+
Sbjct: 234 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK-VRPDTTTFNIIIYC 292
Query: 249 CANLG----ALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---G 301
+ LG AL++ + ++ ++ +++ +Y+ G I+ VF + G
Sbjct: 293 LSKLGQSSQALDLFNSMRE--KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG 350
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
N+ S+N+++ AVHG G AL + + + G PD V++ LL + K +
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGA 418
+F M+ + P + Y ++D G G L EA E+ + M +KP+ V TLL A
Sbjct: 411 EVFLMMRKERR-KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Query: 419 CSFHG---NVELAEIAAES 434
CS NV+ AA+S
Sbjct: 470 CSRSKKKVNVDTVLSAAQS 488
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 112/277 (40%), Gaps = 65/277 (23%)
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLF----DEMPVREVPTWNAMMAGHARFGDVD 189
++G PDV + T LL+ Y + A+ +F E V T+NA++ + G +
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442
Query: 190 GALELFRLMPSR----NVVSWTTMISGYSKNK---------------------------- 217
A+E+FR M NVVS T+++ S++K
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 502
Query: 218 -------QYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGF 270
+ EKA+ L+ M ++ + ++VT ++ R+ Y +
Sbjct: 503 GSYINAAELEKAIALYQSMR-KKKVKADSVTFTILISGSC---------RMSKYPEAISY 552
Query: 271 FKNLY---------VSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAV 318
K + V ++VL Y+K G + A +FN++ G ++ ++ SM+
Sbjct: 553 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 612
Query: 319 HGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGG 355
K GKA EL+ +M G PD + L+ A GG
Sbjct: 613 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 141/315 (44%), Gaps = 24/315 (7%)
Query: 139 PDVFAATALLDMYAKVGTLELARRLFDEM----PVREVPTWNAMMAGHARFGDVDGALEL 194
P + LL +AK+G + +R F +M V T+N M+ + GDV+ A L
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 195 FRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRME---CEEDIMPNAVTLASILP 247
F M R + V++ +MI G+ K + + + F M+ CE P+ +T +++
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE----PDVITYNALIN 340
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVF---NEIGSLR 304
G L IG + NG N+ + +++ + K G + A + + +G +
Sbjct: 341 CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
N ++ S+I G A L ++ML+ G + VT+ L+ +++ +F
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLL-GACS 420
M T +IP L Y ++ +A + A E++ + +KPD +++GT + G CS
Sbjct: 461 GKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 421 FHGNVELAEIAAESL 435
+E A++ +
Sbjct: 520 LE-KIEAAKVVMNEM 533
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 13/279 (4%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVDGA 191
G PD +++D + KVG L+ F+EM +V T+NA++ +FG +
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 192 LELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
LE +R M NVVS++T++ + K ++A+ ++ M ++PN T S++
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR-RVGLVPNEYTYTSLID 410
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLR 304
A +G L R+ + G N+ A+++ + A +F ++ G +
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
NL S+N++I G +ALEL +++ G PD + + + +E + +
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
MK + I Y ++D ++G E ++ M
Sbjct: 531 NEMK-ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 129/305 (42%), Gaps = 15/305 (4%)
Query: 135 SGFAPDVFAATALLDMYAKVGTLELARRLFDEM-PVREVP---TWNAMMAGHARFGDVDG 190
+G P+V + + L+D + K G ++ A + + +M V VP T+ +++ + + G++
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 191 AL----ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
A E+ ++ NVV++T +I G ++ ++A LF +M+ ++PN + +++
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD-TAGVIPNLASYNALI 479
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSL 303
++ + + G +L + + I+ A V NE+ G
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHI 363
N + +++ G + L L D+M VTF L+ +V K
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 364 FKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLLGACS 420
F + DF + + M+D L + ++ A + + M K PD + +L+
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659
Query: 421 FHGNV 425
GNV
Sbjct: 660 KQGNV 664
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 141/376 (37%), Gaps = 52/376 (13%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
Y +M+ G PN + + G P+ + T+L+D
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 151 YAKVGTLELARRLFDEM----PVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNVV-- 204
K+G L A RL +EM V T+ A++ G + A ELF M + V+
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 205 --SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
S+ +I G+ K K ++AL L ++ I P+ + + + +L +E + V
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELK-GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGH--------------------------------- 289
++ G N + +++ Y K G+
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Query: 290 ------IDVAWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVT 343
+D R+ N+ G N + +MI GL + A L++QM+++G PD
Sbjct: 591 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 650
Query: 344 FVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
+ L+ G V + + M + + L Y +V L +L++A ++ M
Sbjct: 651 YTSLMDGNFKQGNVLEALALRDKM-AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Query: 404 ---PMKPDSVIWGTLL 416
+ PD V+ ++L
Sbjct: 710 IGEGIHPDEVLCISVL 725
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 7/199 (3%)
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWR 295
+P ++ +LG LE + + ++ F N +L +AK G D R
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 296 VFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
F ++ G+ + ++N MI + G A L+++M G PD VT+ ++
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDS 409
G ++ F+ MK D P + Y +++ + GKL E + M +KP+
Sbjct: 309 KVGRLDDTVCFFEEMK-DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 410 VIWGTLLGACSFHGNVELA 428
V + TL+ A G ++ A
Sbjct: 368 VSYSTLVDAFCKEGMMQQA 386
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 132/291 (45%), Gaps = 23/291 (7%)
Query: 148 LDMYAKVGTLELARRLFDEMPVR-----EVPTWNAMMAGHARFGD---VDGALELF---- 195
L Y G +A ++F +M +R + T N ++ G R+ + A E+F
Sbjct: 138 LSAYLHEGKPHVALQIFQKM-IRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMV 196
Query: 196 RLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGAL 255
++ S NV ++ +++GY + E ALG+ RM E + P+ VT +IL A + G L
Sbjct: 197 KIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRL 256
Query: 256 EIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRV---FNEIGSLRNLCSWNSM 312
+ + +KNG N N ++ Y K G + A+++ + L +LC++N +
Sbjct: 257 SDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNIL 316
Query: 313 IMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFN 372
I GL G + LEL D M PD VT+ L+ C G+ + R + + M+ D
Sbjct: 317 INGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGV 376
Query: 373 IIPKLEH-----YGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGA 418
++ H + C + R R+ E++ PD V + TL+ A
Sbjct: 377 KANQVTHNISLKWLCKEE--KREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 52/296 (17%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGA 191
GF+PD+ L+ Y KVG L A + EM + + T N ++ + +D A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 192 LELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
L R + V++ T+I G+ + ++ EKAL ++ M+ + I P T S++
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMK-KVKITPTVSTFNSLIG 529
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLR 304
+ G E+ A F+E+ G L
Sbjct: 530 GLCHHGKTEL-----------------------------------AMEKFDELAESGLLP 554
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ ++NS+I+G G+ KA E Y++ ++ PD+ T LL GM EK + F
Sbjct: 555 DDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF 614
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLG 417
++ + + Y M+ + KL+EAY+++ M ++PD + + +
Sbjct: 615 NTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 137 FAPDVFAATALLDMYAKVGTLELARRLFDEMP--------VREVPTWNAMMAGHARFGDV 188
PDV L+D ++G AR+L ++M V + + R
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400
Query: 189 DGALELFRLMP-SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
EL + S ++V++ T+I Y K AL + M ++ I N +TL +IL
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM-GQKGIKMNTITLNTILD 459
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR--- 304
A L+ + A K GF + ++ + + ++ A +++E+ ++
Sbjct: 460 ALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+ ++NS+I GL HGK A+E +D++ G PDD TF ++L G VEK +
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFY 579
Query: 365 -KSMKTDFNIIPKLEHYGCMVDLLG--RAGKLREAYEVIQTM--PMKPDSVIWGTLLGA 418
+S+K F K ++Y C + L G + G +A T+ + D+V + T++ A
Sbjct: 580 NESIKHSF----KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISA 634
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 130/305 (42%), Gaps = 17/305 (5%)
Query: 139 PDVFAATALLDMYAKVGTL-ELARRLFDEMPVREVP---TWNAMMAGHARFGDVDGALEL 194
PD +L +K G L +L L D VP T+N ++ G+ + G + A ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 195 FRLMPSRNVV----SWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACA 250
LM NV+ ++ +I+G + L L M+ + + P+ VT +++ C
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK-LQPDVVTYNTLIDGCF 356
Query: 251 NLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI----GSLRNL 306
LG +++ +G N N L+ K + R E+ G ++
Sbjct: 357 ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDI 416
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
+++++I G ALE+ +M ++G + +T +L A +++ ++ S
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNS 476
Query: 367 MKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEV---IQTMPMKPDSVIWGTLLGACSFHG 423
I+ ++ YG ++ R K+ +A E+ ++ + + P + +L+G HG
Sbjct: 477 AHKRGFIVDEVT-YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 424 NVELA 428
ELA
Sbjct: 536 KTELA 540
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 135/289 (46%), Gaps = 16/289 (5%)
Query: 146 ALLDMYAKVGTLELARRLFDE----MPVREVPTWNAMMAGHARFGDVDGALELFRLMP-- 199
+LL+ K+ +E A +LFDE + T+N ++ G G + ALEL +M
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 200 --SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
++V++ T+I G+ K+ + KA +F ++ P+ VT S++ G +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIM 314
+ + G + N +++ YAK G + A + ++ G ++ ++ S+I
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
G G+ + L+++M G P+ T+ L+ A + + K R + + + +II
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK-DII 414
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGTL-LGAC 419
P+ Y ++D +AGK+ EA +++ M KPD + + L +G C
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHC 463
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 117/244 (47%), Gaps = 14/244 (5%)
Query: 133 IKSG--FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREV----PTWNAMMAGHARFG 186
+KSG +PDV T+++ Y K G + A L D+M + T+N ++ G+A+ G
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Query: 187 DVDGALELFRLMPS----RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
++ A E+ M S +VV++T++I GY + Q + L+ M + PNA T
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN-ARGMFPNAFTY 385
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+ ++ A N L + + ++ N V++ + K G ++ A + E+
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 303 LR---NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEK 359
+ + ++ +I+G + G+ +A+ ++ +M+ G +PD +T LL GM ++
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Query: 360 GRHI 363
H+
Sbjct: 506 AYHL 509
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 276 VSNAVLEMYAKCGHIDVAWRVFNE---IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQM 332
V N++L K ++ A ++F+E S + ++N +I GL GK KALEL M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 333 LREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGK 392
G PD VT+ L+ + K +FK +K+ P + Y M+ +AGK
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 393 LREAYEVIQTM---PMKPDSVIWGTLLGACSFHGNVELAE 429
+REA ++ M + P +V + L+ + G + AE
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 135/289 (46%), Gaps = 16/289 (5%)
Query: 146 ALLDMYAKVGTLELARRLFDE----MPVREVPTWNAMMAGHARFGDVDGALELFRLMP-- 199
+LL+ K+ +E A +LFDE + T+N ++ G G + ALEL +M
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 200 --SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEI 257
++V++ T+I G+ K+ + KA +F ++ P+ VT S++ G +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 258 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIM 314
+ + G + N +++ YAK G + A + ++ G ++ ++ S+I
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 315 GLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNII 374
G G+ + L+++M G P+ T+ L+ A + + K R + + + +II
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK-DII 414
Query: 375 PKLEHYGCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGTL-LGAC 419
P+ Y ++D +AGK+ EA +++ M KPD + + L +G C
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHC 463
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 117/244 (47%), Gaps = 14/244 (5%)
Query: 133 IKSG--FAPDVFAATALLDMYAKVGTLELARRLFDEMPVREV----PTWNAMMAGHARFG 186
+KSG +PDV T+++ Y K G + A L D+M + T+N ++ G+A+ G
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Query: 187 DVDGALELFRLMPS----RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTL 242
++ A E+ M S +VV++T++I GY + Q + L+ M + PNA T
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN-ARGMFPNAFTY 385
Query: 243 ASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGS 302
+ ++ A N L + + ++ N V++ + K G ++ A + E+
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 303 LR---NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEK 359
+ + ++ +I+G + G+ +A+ ++ +M+ G +PD +T LL GM ++
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Query: 360 GRHI 363
H+
Sbjct: 506 AYHL 509
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 276 VSNAVLEMYAKCGHIDVAWRVFNE---IGSLRNLCSWNSMIMGLAVHGKCGKALELYDQM 332
V N++L K ++ A ++F+E S + ++N +I GL GK KALEL M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 333 LREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGK 392
G PD VT+ L+ + K +FK +K+ P + Y M+ +AGK
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 393 LREAYEVIQTM---PMKPDSVIWGTLLGACSFHGNVELAE 429
+REA ++ M + P +V + L+ + G + AE
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 148/344 (43%), Gaps = 18/344 (5%)
Query: 125 GQMLHAHFIKS-GFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMM 179
+ L F K G P + L+ + +E+A+ +F ++ + +V T+N ++
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 180 AGHARFGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDI 235
+ + G +D EL++ M + N ++ +ISG K + AL L+ + + D
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 236 MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWR 295
P A T ++ + G L +++ G N + N ++ + K G D A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 296 VFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
+F + G +L +++ ++ L + G+ + L + ++ G PD V + ++
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREA---YEVIQTMPMKPDS 409
+E+ +F MKT I P L Y ++ LG AG + EA Y IQ ++P+
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 410 VIWGTLLGACSFHGNVELAEIAAESLFT--LEPRNPGNYVILSN 451
+ L+ S G E A +++ T P N G Y L N
Sbjct: 1068 FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP-NTGTYEQLPN 1110
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 162/375 (43%), Gaps = 56/375 (14%)
Query: 93 LYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYA 152
++ +M+ H P++ + + K G PDV T L+D
Sbjct: 315 VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374
Query: 153 KVG-------TLELARRLFDEMPVREVPTWNAMMAGHARFGDVDGALELFRLMPSRNV-- 203
K G TL++ R D+ + + T+N ++ G R +D ALELF M S V
Sbjct: 375 KAGNFGEAFDTLDVMR---DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 204 --VSWTTMISGYSKNKQYEKALGLFLRMECE----------------------------- 232
++ I Y K+ AL F +M+ +
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 233 ---EDI--MPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKC 287
+DI +P++VT ++ + +G ++ ++ + +NG ++ V N+++ K
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 288 GHIDVAWRVFNEIGSLR---NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTF 344
+D AW++F + ++ + ++N+++ GL +GK +A+EL++ M+++G P+ +TF
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 345 VGLL-LACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
L C + + + +FK M D +P + Y ++ L + G+++EA M
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMM--DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Query: 404 P--MKPDSVIWGTLL 416
+ PD V TLL
Sbjct: 670 KKLVYPDFVTLCTLL 684
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 136/344 (39%), Gaps = 55/344 (15%)
Query: 136 GFAPDVFAATALLDMYAKVGTL----ELARRLFDEMPVREVPTWNAMMAGHARFGDVDGA 191
G P+V+ T + + + G + E+ +R+ DE +V T+ ++ +D A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 192 LELFRLM------PSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
E+F M P R V++ T++ +S N+ + + ME ++ +P+ VT +
Sbjct: 313 KEVFEKMKTGRHKPDR--VTYITLLDRFSDNRDLDSVKQFWSEME-KDGHVPDVVTFTIL 369
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRN 305
+ A G R G NL+ N ++ + +D A +F + SL
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 306 LCSWNSMIMGLAVHGKCG---KALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
+ + I+ + +GK G ALE +++M +G P+ V L + G + +
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVI---------------------- 400
IF +K D ++P Y M+ + G++ EA +++
Sbjct: 490 IFYGLK-DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 401 ----------------QTMPMKPDSVIWGTLLGACSFHGNVELA 428
+ M +KP V + TLL +G ++ A
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 143/347 (41%), Gaps = 16/347 (4%)
Query: 96 QMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMYAKVG 155
+MR G N Y ++ I GF P + ++L+ K
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 156 TLELARRLFDEMPV----REVPTWNAMMAGHARFGDVDGALELFRLMPSR----NVVSWT 207
++ L EM V T+ + R G ++ A E+ + M +VV++T
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 208 TMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARK 267
+I ++ + A +F +M+ P+ VT ++L ++ L+ ++ + K
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRH-KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 268 NGFFKNLYVSNAVLEMYAKCGHIDVAWR---VFNEIGSLRNLCSWNSMIMGLAVHGKCGK 324
+G ++ +++ K G+ A+ V + G L NL ++N++I GL +
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 325 ALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMV 384
ALEL+ M G P T++ + G F+ MKT I P + +
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK-GIAPNIVACNASL 475
Query: 385 DLLGRAGKLREAYEV---IQTMPMKPDSVIWGTLLGACSFHGNVELA 428
L +AG+ REA ++ ++ + + PDSV + ++ S G ++ A
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
Query: 293 AWRVFNEIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACT 352
A R E G + N S+N +I L C +A+E+Y +M+ EG P T+ L++
Sbjct: 175 ALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLG 234
Query: 353 HGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDS 409
++ + K M+T + P + + + +LGRAGK+ EAYE+++ M + PD
Sbjct: 235 KRRDIDSVMGLLKEMET-LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 410 VIWGTLLGACSFHGNVELAEIAAESLFTLEPR-NPGNYVILSNIYASADQWDGVAKL 465
V + L+ A ++ A+ E + T + + Y+ L + ++ D V +
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 138/351 (39%), Gaps = 50/351 (14%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELA-RRLFDEMPVREVP---TWNAMMAGHA 183
L ++ G P+ L D K + LA + LF M + VP T+N ++ G
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654
Query: 184 RFGDVDGALELFRLMPS---RNVVSWTTMISGYSKNKQYEKALGLFLRM--ECE------ 232
+ G V A+ F M + V+ T++ G K E A + C
Sbjct: 655 KNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL 714
Query: 233 --EDIM---------PNAVTLASILPA---CANLGALEI-------------GQRV--EA 263
ED++ NAV+ + L A C + ++ + G R E
Sbjct: 715 FWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEK 774
Query: 264 YARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHG 320
+ + G L N ++ + I++A VF ++ G + ++ ++N ++ G
Sbjct: 775 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 321 KCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHY 380
K + ELY +M + +T ++ G V+ ++ + +D + P Y
Sbjct: 835 KIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTY 894
Query: 381 GCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGTLLGACSFHGNVELA 428
G ++D L ++G+L EA ++ + M +P+ I+ L+ G + A
Sbjct: 895 GPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 9/237 (3%)
Query: 174 TWNAMMAGHAR---FGDVDGAL-ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRM 229
T+ M+ R FG ++ L E+ R N V++ +I Y + +A+ +F +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 230 ECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGH 289
+ E P+ VT +++ A G L+I + + G + + + ++ K GH
Sbjct: 426 Q-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 290 IDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVG 346
+ A ++F E+ G NL ++N M+ A AL+LY M G PD VT+
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 347 LLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
++ H G +E+ +F M+ N IP YG +VDL G+AG + +A++ Q M
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 119/296 (40%), Gaps = 42/296 (14%)
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
PN+ YN+L+ +Y ++++QM+ G P++
Sbjct: 397 PNTVT--YNRLIHSYGRANYLNE-AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAG 181
++ G +PD F + +++ K G L A +LF EM + T+N MM
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
HA+ + AL+L+R M +N +E P+ VT
Sbjct: 514 HAKARNYQNALKLYRDM----------------QNAGFE----------------PDKVT 541
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI- 300
+ ++ + G LE + V ++ + + V +++++ K G+++ AW+ + +
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 301 --GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
G N+ + NS++ K +A EL ML G P T+ LL CT G
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 9/237 (3%)
Query: 174 TWNAMMAGHAR---FGDVDGAL-ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRM 229
T+ M+ R FG ++ L E+ R N V++ +I Y + +A+ +F +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 230 ECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGH 289
+ E P+ VT +++ A G L+I + + G + + + ++ K GH
Sbjct: 426 Q-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 290 IDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVG 346
+ A ++F E+ G NL ++N M+ A AL+LY M G PD VT+
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 347 LLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
++ H G +E+ +F M+ N IP YG +VDL G+AG + +A++ Q M
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 119/296 (40%), Gaps = 42/296 (14%)
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
PN+ YN+L+ +Y ++++QM+ G P++
Sbjct: 397 PNTVT--YNRLIHSYGRANYLNE-AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAG 181
++ G +PD F + +++ K G L A +LF EM + T+N MM
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
HA+ + AL+L+R M +N +E P+ VT
Sbjct: 514 HAKARNYQNALKLYRDM----------------QNAGFE----------------PDKVT 541
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI- 300
+ ++ + G LE + V ++ + + V +++++ K G+++ AW+ + +
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 301 --GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
G N+ + NS++ K +A EL ML G P T+ LL CT G
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 140/304 (46%), Gaps = 14/304 (4%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGA 191
G P+ ++D Y + G L AR + M + + +N ++ G+++ A
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 192 LELFRLMP----SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
+ M S +V ++ +I GY + +++K + ME + MPN V+ +++
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME-DNGTMPNVVSYGTLIN 502
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLR 304
L Q V+ G + + N +++ G I+ A+R E+ G
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
NL ++N++I GL++ GK +A +L ++ R+G PD T+ L+ G V++ ++
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMKPDSVIWGTLLGACSFHGN 424
+ MK I P L+ Y ++ L + G + + M +KPD +++ +L + HG+
Sbjct: 623 EEMKRS-GIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGD 680
Query: 425 VELA 428
+E A
Sbjct: 681 MEKA 684
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 16/292 (5%)
Query: 139 PDVFAATALLDMYAKVGTLELARRLFDEMPVRE----VPTWNAMMAGHARFGDVDGALEL 194
P VF L+D K + A +LFDEM R + T+N ++ G+ + G+ + + ++
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 195 FRLMPSRNV----VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACA 250
M + ++ +++ T++ G K E A + M+ + +P+A T + + +
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK-DLGFVPDAFTFSILFDGYS 330
Query: 251 NLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE---IGSLRNLC 307
+ E V A +G N Y + +L K G I+ A + G + N
Sbjct: 331 SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390
Query: 308 SWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSM 367
+N+MI G G A + M ++G PD + + L+ G +E M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450
Query: 368 KTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLL 416
K + P +E Y ++ GR + + +++++ M P+ V +GTL+
Sbjct: 451 KLK-GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 14/241 (5%)
Query: 197 LMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALE 256
+ PS + S T ++ K KQ+ + +FL + E D P+ + A L +
Sbjct: 140 IYPSSD--SLTLLLDHLVKTKQFRVTINVFLNI-LESDFRPSKFMYGKAIQAAVKLS--D 194
Query: 257 IGQRVEAYAR--KNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR---NLCSWNS 311
+G+ +E + R + + ++++ N +++ K ++ A ++F+E+ + R +L ++N+
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 312 MIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDF 371
+I G G K+ ++ ++M + P +TF LL GMVE ++ K MK D
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK-DL 313
Query: 372 NIIPKLEHYGCMVDLLGRAGKLREA---YEVIQTMPMKPDSVIWGTLLGACSFHGNVELA 428
+P + + D K A YE +K ++ LL A G +E A
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 429 E 429
E
Sbjct: 374 E 374
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 114/258 (44%), Gaps = 11/258 (4%)
Query: 135 SGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVDG 190
+G P+V + L++ K L A+ + +M R +V +N ++ G G ++
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 191 ALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
A + M + N+V++ T+I G S + +A L L + + + P+ T S++
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS-RKGLKPDVFTYNSLI 606
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLRNL 306
G ++ + +++G L + ++ + K G I++ R+F E+ +L
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDL 665
Query: 307 CSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKS 366
+N ++ AVHG KA L QM+ + D T+ L+L G + + R +
Sbjct: 666 LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725
Query: 367 MKTDFNIIPKLEHYGCMV 384
M + P+ + Y +V
Sbjct: 726 MNAR-EMEPEADTYNIIV 742
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 9/237 (3%)
Query: 174 TWNAMMAGHAR---FGDVDGAL-ELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRM 229
T+ M+ R FG ++ L E+ R N V++ +I Y + +A+ +F +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 230 ECEEDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGH 289
+ E P+ VT +++ A G L+I + + G + + + ++ K GH
Sbjct: 426 Q-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 290 IDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVG 346
+ A ++F E+ G NL ++N M+ A AL+LY M G PD VT+
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 347 LLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM 403
++ H G +E+ +F M+ N IP YG +VDL G+AG + +A++ Q M
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 119/296 (40%), Gaps = 42/296 (14%)
Query: 66 PNSTVFLYNKLLQAYXXXXXXXXXCFSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXG 125
PN+ YN+L+ +Y ++++QM+ G P++
Sbjct: 397 PNTVT--YNRLIHSYGRANYLNE-AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 126 QMLHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAG 181
++ G +PD F + +++ K G L A +LF EM + T+N MM
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 182 HARFGDVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVT 241
HA+ + AL+L+R M +N +E P+ VT
Sbjct: 514 HAKARNYQNALKLYRDM----------------QNAGFE----------------PDKVT 541
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI- 300
+ ++ + G LE + V ++ + + V +++++ K G+++ AW+ + +
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 301 --GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
G N+ + NS++ K +A EL ML G P T+ LL CT G
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 132/324 (40%), Gaps = 45/324 (13%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
+L+ +M G PN L + I+ P++ AL+D
Sbjct: 280 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 151 YAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGALELFRLMPSR----N 202
+ K G A +L+D+M R + T+N+++ G +D A ++F M S+ +
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRM-----------------------ECE------- 232
VV++ T+I G+ K+K+ E LF M +C+
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 233 ----EDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCG 288
+ + P+ +T + +L N G LE V Y +K+ ++Y+ ++E K G
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 289 HIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFV 345
+D W +F + G N+ ++N+MI GL +A L +M +G P+ T+
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Query: 346 GLLLACTHGGMVEKGRHIFKSMKT 369
L+ A G + + M++
Sbjct: 580 TLIRAHLRDGDKAASAELIREMRS 603
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 162/379 (42%), Gaps = 52/379 (13%)
Query: 92 SLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDMY 151
+L QM +G+ P+ L ++ G P++ +++
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 152 AKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVDGALELFRLMPSR----NV 203
K G +LA L ++M +V +N ++ ++ VD AL LF+ M ++ NV
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 204 VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVEA 263
V+++++IS ++ A L M E+ I PN VT +++ A G +++
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 264 YARK--------------NGF---------------------FKNLYVSNAVLEMYAKCG 288
K NGF F ++ N +++ + K
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 289 HIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFV 345
++ +F E+ G + + ++ ++I GL G C A +++ QM+ +G PD +T+
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 346 GLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPM 405
LL + G +EK +F M+ I + Y M++ + +AGK+ + +++ ++ +
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 406 ---KPDSVIWGTLL-GACS 420
KP+ V + T++ G CS
Sbjct: 534 KGVKPNVVTYNTMISGLCS 552
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 147/382 (38%), Gaps = 84/382 (21%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFD---EMPVR-EVPTWNAMMAGHA 183
L +K G+ P + ++LL+ Y + A L D EM R + T+ ++ G
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 184 RFGDVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMEC---EEDIM 236
A+ L M R N+V++ +++G K + AL L +ME E D++
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 237 -------------------------------PNAVTLASILPACANLGALEIGQRVEAYA 265
PN VT +S++ + G ++ +
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 266 RKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSLR---NLCSWNSMIMGLAVHGKC 322
+ NL NA+++ + K G A ++++++ ++ ++NS++ G +H +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 323 GKA-----------------------------------LELYDQMLREGTTPDDVTFVGL 347
KA EL+ +M G D VT+ L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 348 LLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEV---IQTMP 404
+ H G + + +FK M +D + P + Y ++D L GKL +A EV +Q
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 405 MKPDSVIWGTLLGACSFHGNVE 426
+K D I+ T++ G V+
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVD 522
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 42/265 (15%)
Query: 200 SRNVVSWTTMISGYSKNKQYEKALGLFLRME---CE------------------------ 232
S +V S+T++IS ++ + +Y +A+ +F +ME C+
Sbjct: 205 SLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKIT 264
Query: 233 --------EDIMPNAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMY 284
+ I P+A T +++ C + +V + GF + NA+L++Y
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 285 AKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDD 341
K A +V NE+ G ++ ++NS+I A G +A+EL +QM +GT PD
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 342 VTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLRE---AYE 398
T+ LL G VE IF+ M+ + P + + + + G GK E ++
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMR-NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 399 VIQTMPMKPDSVIWGTLLGACSFHG 423
I + PD V W TLL +G
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNG 468
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 140/311 (45%), Gaps = 17/311 (5%)
Query: 134 KSGFAPDVFAATALLDMYAKVGT-----LELARRLFDEMPVREVPTWNAMMAGHARFGDV 188
+ G P + +L+++ K+GT L ++ + + T+N ++ R
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 189 DGALELFRLMP----SRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLAS 244
A ++F M S + V++ ++ Y K+ + ++A+ + M P+ VT S
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM-VLNGFSPSIVTYNS 354
Query: 245 ILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---G 301
++ A A G L+ ++ + G +++ +L + + G ++ A +F E+ G
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 302 SLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGR 361
N+C++N+ I GK + ++++D++ G +PD VT+ LL GM +
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 362 HIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGTLLGA 418
+FK MK +P+ E + ++ R G +A V + M + PD + T+L A
Sbjct: 475 GVFKEMKRA-GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 419 CSFHGNVELAE 429
+ G E +E
Sbjct: 534 LARGGMWEQSE 544
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 148/330 (44%), Gaps = 28/330 (8%)
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELA----RRLFDEMPVREVPTWNAMMAGHARFG--- 186
++GF P+ L+ Y++ G+ E A RR+ D ++ T+N ++A AR G
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 187 ---DVDGALELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECE---EDIMPNAV 240
V +E R P N +++ +++ Y+ K+ +GL + E I P AV
Sbjct: 542 QSEKVLAEMEDGRCKP--NELTYCSLLHAYANGKE----IGLMHSLAEEVYSGVIEPRAV 595
Query: 241 TLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN-- 298
L +++ C+ L +R + ++ GF ++ N+++ +Y + + A V +
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Query: 299 -EIGSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMV 357
E G ++ ++NS++ + GK+ E+ ++L +G PD +++ ++ A +
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 358 EKGRHIFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTM---PMKPDSVIWGT 414
IF M+ I+P + Y + EA V++ M +P+ + +
Sbjct: 716 RDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 415 LL-GACSFHGNVELAEIAAESLFTLEPRNP 443
++ G C + E A++ E L L+P P
Sbjct: 775 IVDGYCKLNRKDE-AKLFVEDLRNLDPHAP 803
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 110/236 (46%), Gaps = 14/236 (5%)
Query: 131 HFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFG 186
+ +GF+P + +L+ YA+ G L+ A L ++M + +V T+ +++G R G
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG 398
Query: 187 DVDGALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRME-CEEDIMPNAVT 241
V+ A+ +F M + N+ ++ I Y ++ + + +F + C + P+ VT
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC--GLSPDIVT 456
Query: 242 LASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI- 300
++L G V ++ GF N ++ Y++CG + A V+ +
Sbjct: 457 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Query: 301 --GSLRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHG 354
G +L ++N+++ LA G ++ ++ +M P+++T+ LL A +G
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 139/309 (44%), Gaps = 15/309 (4%)
Query: 133 IKSGFAPDVFAATALLDMYAKVGTLELARRLFDEMP---VREVPTWNAMMAGHARFGDVD 189
+ +GF P LL + F+E V +V ++ ++ G G+++
Sbjct: 121 VDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIE 180
Query: 190 GA----LELFRLMPSRNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
+ +EL S NVV +TT+I G K + EKA LF M + ++ N T +
Sbjct: 181 KSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG-KLGLVANERTYTVL 239
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GS 302
+ G + G + +++G F NLY N V+ K G A++VF+E+ G
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
N+ ++N++I GL K +A ++ DQM +G P+ +T+ L+ G + K
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMP---MKPDSVIWGTLLGAC 419
+ + +K+ + P L Y +V R G A ++++ M +KP V + L+
Sbjct: 360 LCRDLKSR-GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 420 SFHGNVELA 428
+ N+E A
Sbjct: 419 ARSDNMEKA 427
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 131/299 (43%), Gaps = 17/299 (5%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAGHARFGDVDGA 191
GF+P+V T L+D K G +E A+ LF EM V T+ ++ G + G
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 192 LELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILP 247
E++ M N+ ++ +++ K+ + + A +F M E + N VT +++
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR-ERGVSCNIVTYNTLIG 311
Query: 248 ACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEIGSL---R 304
L +V + +G NL N +++ + G + A + ++ S
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 305 NLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIF 364
+L ++N ++ G G A ++ +M G P VT+ L+ +EK +
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 365 KSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTL-LGAC 419
SM+ + ++P + Y ++ G++ EA + ++M K P+ VI+ T+ LG C
Sbjct: 432 LSME-ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 108/265 (40%), Gaps = 12/265 (4%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
F +Y +M+ G PN Y + + G + ++ L+
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 151 YAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGALELFRLMPSR----N 202
+ L A ++ D+M + T+N ++ G G + AL L R + SR +
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 203 VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
+V++ ++SG+ + A + ME E I P+ VT ++ A +E ++
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEME-ERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFN---EIGSLRNLCSWNSMIMGLAVH 319
+ G +++ + ++ + G ++ A R+F E N +N+MI+G
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 320 GKCGKALELYDQMLREGTTPDDVTF 344
G +AL+L +M + P+ ++
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASY 516
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 143/344 (41%), Gaps = 17/344 (4%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
+ L M+ G PN Y + + I+ G PD T L+D
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 151 YAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGALELFRLMPSRNV--- 203
+ K G + A + F EM R++ T+ A+++G + GD+ A +LF M + +
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 204 -VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
V++T +I+GY K + A + M + PN VT +++ G L+ +
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVH 319
K G N++ N+++ K G+I+ A ++ E G + ++ +++
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G+ KA E+ +ML +G P VTF L+ GM+E G + M I P
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATT 598
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLL-GAC 419
+ +V L+ A + + M + PD + L+ G C
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 141/309 (45%), Gaps = 16/309 (5%)
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVD 189
+ G P+ + +++ + ++ L A F EM + + + ++ G + GD+
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 190 GALELFRLMPSRN----VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
A + F M SR+ V+++T +ISG+ + +A LF M C+ + P++VT +
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTEL 427
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE---IGS 302
+ G ++ RV + + G N+ +++ K G +D A + +E IG
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
N+ ++NS++ GL G +A++L + G D VT+ L+ A G ++K +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLLGAC 419
I K M + P + + +++ G L + +++ M K P++ + +L+
Sbjct: 548 ILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 420 SFHGNVELA 428
N++ A
Sbjct: 607 CIRNNLKAA 615
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 51/265 (19%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEM------PVREVPTWNAMMAG 181
+H H I++G +P+V T L+D K G L+ A L EM P + T+N+++ G
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP--NIFTYNSIVNG 500
Query: 182 HARFGDVDGALELFRLMPS----RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
+ G+++ A++L + + V++TT++ Y K+ + +KA + M + + P
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM-LGKGLQP 559
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMY------------- 284
VT ++ G LE G+++ + G N N++++ Y
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 285 ----------------------AKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVH 319
K ++ AW +F E+ G ++ +++ +I G
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Query: 320 GKCGKALELYDQMLREGTTPDDVTF 344
K +A E++DQM REG D F
Sbjct: 680 KKFLEAREVFDQMRREGLAADKEIF 704
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 134/309 (43%), Gaps = 21/309 (6%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAGHAR-FGDVDG 190
G P VF + G L ARR+F++M V V + N + ++
Sbjct: 172 GSDPRVF--DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 191 ALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
A+ +FR P NV S+ +I + + ++A L L ME + P+ ++ ++++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPDVISYSTVV 288
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSL 303
G L+ ++ ++ G N Y+ +++ + + + A F+E+ G L
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA-CTHGGMVEKGRH 362
+ + ++I G G A + + +M TPD +T+ ++ C G MVE G+
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK- 407
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPM---KPDSVIWGTLLGAC 419
+F M + P + +++ +AG +++A+ V M P+ V + TL+
Sbjct: 408 LFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 420 SFHGNVELA 428
G+++ A
Sbjct: 467 CKEGDLDSA 475
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 143/344 (41%), Gaps = 17/344 (4%)
Query: 91 FSLYSQMRLLGHSPNQYXXXXXXXXXXXXXXXXXGQMLHAHFIKSGFAPDVFAATALLDM 150
+ L M+ G PN Y + + I+ G PD T L+D
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 151 YAKVGTLELARRLFDEMPVREVP----TWNAMMAGHARFGDVDGALELFRLMPSRNV--- 203
+ K G + A + F EM R++ T+ A+++G + GD+ A +LF M + +
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 204 -VSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASILPACANLGALEIGQRVE 262
V++T +I+GY K + A + M + PN VT +++ G L+ +
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 263 AYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVH 319
K G N++ N+++ K G+I+ A ++ E G + ++ +++
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 320 GKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRHIFKSMKTDFNIIPKLEH 379
G+ KA E+ +ML +G P VTF L+ GM+E G + M I P
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATT 598
Query: 380 YGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLL-GAC 419
+ +V L+ A + + M + PD + L+ G C
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 141/309 (45%), Gaps = 16/309 (5%)
Query: 134 KSGFAPDVFAATALLDMYAKVGTLELARRLFDEMPVR----EVPTWNAMMAGHARFGDVD 189
+ G P+ + +++ + ++ L A F EM + + + ++ G + GD+
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 190 GALELFRLMPSRN----VVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASI 245
A + F M SR+ V+++T +ISG+ + +A LF M C+ + P++VT +
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTEL 427
Query: 246 LPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNE---IGS 302
+ G ++ RV + + G N+ +++ K G +D A + +E IG
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 303 LRNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLACTHGGMVEKGRH 362
N+ ++NS++ GL G +A++L + G D VT+ L+ A G ++K +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPMK---PDSVIWGTLLGAC 419
I K M + P + + +++ G L + +++ M K P++ + +L+
Sbjct: 548 ILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 420 SFHGNVELA 428
N++ A
Sbjct: 607 CIRNNLKAA 615
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 51/265 (19%)
Query: 128 LHAHFIKSGFAPDVFAATALLDMYAKVGTLELARRLFDEM------PVREVPTWNAMMAG 181
+H H I++G +P+V T L+D K G L+ A L EM P + T+N+++ G
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP--NIFTYNSIVNG 500
Query: 182 HARFGDVDGALELFRLMPS----RNVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMP 237
+ G+++ A++L + + V++TT++ Y K+ + +KA + M + + P
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM-LGKGLQP 559
Query: 238 NAVTLASILPACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMY------------- 284
VT ++ G LE G+++ + G N N++++ Y
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 285 ----------------------AKCGHIDVAWRVFNEI---GSLRNLCSWNSMIMGLAVH 319
K ++ AW +F E+ G ++ +++ +I G
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Query: 320 GKCGKALELYDQMLREGTTPDDVTF 344
K +A E++DQM REG D F
Sbjct: 680 KKFLEAREVFDQMRREGLAADKEIF 704
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 134/309 (43%), Gaps = 21/309 (6%)
Query: 136 GFAPDVFAATALLDMYAKVGTLELARRLFDEMP----VREVPTWNAMMAGHAR-FGDVDG 190
G P VF + G L ARR+F++M V V + N + ++
Sbjct: 172 GSDPRVF--DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 191 ALELFRLMPSR----NVVSWTTMISGYSKNKQYEKALGLFLRMECEEDIMPNAVTLASIL 246
A+ +FR P NV S+ +I + + ++A L L ME + P+ ++ ++++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPDVISYSTVV 288
Query: 247 PACANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGHIDVAWRVFNEI---GSL 303
G L+ ++ ++ G N Y+ +++ + + + A F+E+ G L
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 304 RNLCSWNSMIMGLAVHGKCGKALELYDQMLREGTTPDDVTFVGLLLA-CTHGGMVEKGRH 362
+ + ++I G G A + + +M TPD +T+ ++ C G MVE G+
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK- 407
Query: 363 IFKSMKTDFNIIPKLEHYGCMVDLLGRAGKLREAYEVIQTMPM---KPDSVIWGTLLGAC 419
+F M + P + +++ +AG +++A+ V M P+ V + TL+
Sbjct: 408 LFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 420 SFHGNVELA 428
G+++ A
Sbjct: 467 CKEGDLDSA 475