Miyakogusa Predicted Gene

Lj3g3v2477730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2477730.1 Non Chatacterized Hit- tr|D8RRS9|D8RRS9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,59.46,6e-19,Yippee,Yippee-like protein; PUTATIVE
UNCHARACTERIZED PROTEIN,NULL; FAD NAD BINDING
OXIDOREDUCTASES,N,CUFF.44067.1
         (76 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27745.1 | Symbols:  | Yippee family putative zinc-binding pr...   112   4e-26
AT4G27740.1 | Symbols:  | Yippee family putative zinc-binding pr...    85   8e-18
AT3G11230.1 | Symbols:  | Yippee family putative zinc-binding pr...    82   6e-17
AT3G11230.2 | Symbols:  | Yippee family putative zinc-binding pr...    82   8e-17
AT3G55890.1 | Symbols:  | Yippee family putative zinc-binding pr...    75   8e-15
AT5G53940.1 | Symbols:  | Yippee family putative zinc-binding pr...    74   1e-14
AT3G08990.2 | Symbols:  | Yippee family putative zinc-binding pr...    72   6e-14
AT3G08990.1 | Symbols:  | Yippee family putative zinc-binding pr...    72   6e-14
AT2G40110.2 | Symbols:  | Yippee family putative zinc-binding pr...    71   1e-13
AT2G40110.1 | Symbols:  | Yippee family putative zinc-binding pr...    71   1e-13

>AT4G27745.1 | Symbols:  | Yippee family putative zinc-binding
          protein | chr4:13840530-13841279 FORWARD LENGTH=106
          Length = 106

 Score =  112 bits (281), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 50/76 (65%), Positives = 58/76 (76%)

Query: 1  MAELMGSRAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIILGPKEDRQLMTGL 60
          MA+ +G R Y C  C+N V  HDDI+SK FQ   GRAFLFSHAMNI++GPKEDR L+TGL
Sbjct: 1  MAQAIGPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGL 60

Query: 61 HTVADVYCSDCGEELG 76
          HTVAD+ C DC E LG
Sbjct: 61 HTVADISCVDCNEPLG 76


>AT4G27740.1 | Symbols:  | Yippee family putative zinc-binding
          protein | chr4:13839148-13839616 FORWARD LENGTH=105
          Length = 105

 Score = 85.1 bits (209), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 50/68 (73%)

Query: 9  AYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIILGPKEDRQLMTGLHTVADVYC 68
           Y C  C+N +A  +D++SK F  ++G AF+FSHAMN+++GPK  R+L+TG + VADV C
Sbjct: 9  TYFCRNCENPLALGEDLISKKFVGASGPAFMFSHAMNVVVGPKIGRKLITGSYVVADVMC 68

Query: 69 SDCGEELG 76
          S CGE LG
Sbjct: 69 SKCGETLG 76


>AT3G11230.1 | Symbols:  | Yippee family putative zinc-binding
          protein | chr3:3516782-3518193 FORWARD LENGTH=129
          Length = 129

 Score = 82.4 bits (202), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 49/69 (71%)

Query: 8  RAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIILGPKEDRQLMTGLHTVADVY 67
          ++Y C  C+  +A  DD+VSK FQ+ +G+A+LFS  +N+  G KEDR +MTG+HTV D+Y
Sbjct: 12 KSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIY 71

Query: 68 CSDCGEELG 76
          C  CG  +G
Sbjct: 72 CVKCGSYVG 80


>AT3G11230.2 | Symbols:  | Yippee family putative zinc-binding
           protein | chr3:3516683-3518193 FORWARD LENGTH=162
          Length = 162

 Score = 82.0 bits (201), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 49/69 (71%)

Query: 8   RAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIILGPKEDRQLMTGLHTVADVY 67
           ++Y C  C+  +A  DD+VSK FQ+ +G+A+LFS  +N+  G KEDR +MTG+HTV D+Y
Sbjct: 45  KSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIY 104

Query: 68  CSDCGEELG 76
           C  CG  +G
Sbjct: 105 CVKCGSYVG 113


>AT3G55890.1 | Symbols:  | Yippee family putative zinc-binding
          protein | chr3:20740908-20741868 FORWARD LENGTH=121
          Length = 121

 Score = 75.1 bits (183), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 1/76 (1%)

Query: 1  MAELMGSRAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIILGPKEDRQLMTGL 60
          M +L G+  Y C  C+  ++   DI+SK FQ  NGRA+LF++ +N+ +G KEDR ++TGL
Sbjct: 6  MVDLEGN-IYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMMITGL 64

Query: 61 HTVADVYCSDCGEELG 76
          H V D++C  CG  +G
Sbjct: 65 HNVVDIFCVGCGSNVG 80


>AT5G53940.1 | Symbols:  | Yippee family putative zinc-binding
          protein | chr5:21897164-21898589 REVERSE LENGTH=129
          Length = 129

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 53/75 (70%), Gaps = 1/75 (1%)

Query: 2  AELMGSRAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIILGPKEDRQLMTGLH 61
           EL G R+Y C  C+  +A  DD+VS+ F    G+A+LF+ ++NI +GP E+R +++G+H
Sbjct: 7  VELEG-RSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGMH 65

Query: 62 TVADVYCSDCGEELG 76
          TVAD++C  CG+ +G
Sbjct: 66 TVADIFCCCCGQNVG 80


>AT3G08990.2 | Symbols:  | Yippee family putative zinc-binding
          protein | chr3:2743590-2744709 FORWARD LENGTH=128
          Length = 128

 Score = 72.4 bits (176), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query: 9  AYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIILGPKEDRQLMTGLHTVADVYC 68
           Y C  CQ   A  +DI+SK F   +GRA+LF + +N+ +G KE R ++TG HTVAD++C
Sbjct: 13 VYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFC 72

Query: 69 SDCGEELG 76
            CG  +G
Sbjct: 73 VSCGSLVG 80


>AT3G08990.1 | Symbols:  | Yippee family putative zinc-binding
          protein | chr3:2743590-2744709 FORWARD LENGTH=128
          Length = 128

 Score = 72.4 bits (176), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query: 9  AYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIILGPKEDRQLMTGLHTVADVYC 68
           Y C  CQ   A  +DI+SK F   +GRA+LF + +N+ +G KE R ++TG HTVAD++C
Sbjct: 13 VYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFC 72

Query: 69 SDCGEELG 76
            CG  +G
Sbjct: 73 VSCGSLVG 80


>AT2G40110.2 | Symbols:  | Yippee family putative zinc-binding
          protein | chr2:16748159-16749226 FORWARD LENGTH=110
          Length = 110

 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 46/69 (66%)

Query: 8  RAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIILGPKEDRQLMTGLHTVADVY 67
          + Y C  C+  +A ++DI+SK F   +G+A+LF+   N+ +G  E+R +MTG HTVAD++
Sbjct: 12 KIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLMMTGKHTVADIF 71

Query: 68 CSDCGEELG 76
          C  CG  +G
Sbjct: 72 CVSCGSIVG 80


>AT2G40110.1 | Symbols:  | Yippee family putative zinc-binding
          protein | chr2:16748159-16749357 FORWARD LENGTH=130
          Length = 130

 Score = 70.9 bits (172), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 46/69 (66%)

Query: 8  RAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIILGPKEDRQLMTGLHTVADVY 67
          + Y C  C+  +A ++DI+SK F   +G+A+LF+   N+ +G  E+R +MTG HTVAD++
Sbjct: 12 KIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLMMTGKHTVADIF 71

Query: 68 CSDCGEELG 76
          C  CG  +G
Sbjct: 72 CVSCGSIVG 80