Miyakogusa Predicted Gene

Lj3g3v2477710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2477710.1 Non Chatacterized Hit- tr|I3SFQ3|I3SFQ3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.36,0,ORMDL,
ARATH,NULL; ORMDL PROTEINS,ORMDL; ORMDL,ORMDL,CUFF.44066.1
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42000.1 | Symbols:  | ORMDL family protein | chr5:16799455-1...   280   3e-76
AT1G01230.1 | Symbols:  | ORMDL family protein | chr1:97620-9904...   278   1e-75
AT5G42000.2 | Symbols:  | ORMDL family protein | chr5:16799455-1...   202   6e-53

>AT5G42000.1 | Symbols:  | ORMDL family protein |
           chr5:16799455-16800681 FORWARD LENGTH=154
          Length = 154

 Score =  280 bits (716), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 130/154 (84%), Positives = 144/154 (93%)

Query: 4   LYVKAVPPADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFSCSPGIAWTIVNLVHFLV 63
           +YV+A+P  D+NRNTEWFTYPGVWTTYILILFFSW+LVLSVF CSPGIAWTIV+L HF V
Sbjct: 1   MYVRALPTTDVNRNTEWFTYPGVWTTYILILFFSWLLVLSVFHCSPGIAWTIVHLAHFTV 60

Query: 64  TYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPLVLYLIASHTTDYQ 123
           TYH FHWKKGTPF +DQG+YNRLTWWEQIDNGKQLTRNRKFLTVVP+VLYLIASHTTDYQ
Sbjct: 61  TYHSFHWKKGTPFGDDQGVYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ 120

Query: 124 NPMLFFNTVAVIVLVVAKFPNMHKVRIFGINADK 157
           +PMLF NT+AV V+VVAKFP+MHKVRIFGIN D+
Sbjct: 121 HPMLFLNTLAVFVMVVAKFPHMHKVRIFGINGDQ 154


>AT1G01230.1 | Symbols:  | ORMDL family protein | chr1:97620-99046
           FORWARD LENGTH=157
          Length = 157

 Score =  278 bits (710), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 129/157 (82%), Positives = 145/157 (92%)

Query: 1   MANLYVKAVPPADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFSCSPGIAWTIVNLVH 60
           MANLYVKAVPP D+NRNTEWF YPGVWTTY+LILFF W++VLSV  CSPG+AWT+VNL H
Sbjct: 1   MANLYVKAVPPPDMNRNTEWFMYPGVWTTYMLILFFGWLVVLSVSGCSPGMAWTVVNLAH 60

Query: 61  FLVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPLVLYLIASHTT 120
           F+VTYH FHW KGTPFA+DQGIYN LTWWEQ+DNG+QLTRNRKFLT+VP+VLYLIASHTT
Sbjct: 61  FVVTYHSFHWMKGTPFADDQGIYNGLTWWEQMDNGQQLTRNRKFLTLVPVVLYLIASHTT 120

Query: 121 DYQNPMLFFNTVAVIVLVVAKFPNMHKVRIFGINADK 157
           DY++P LF NT+AV+VLVVAKFPNMHKVRIFGIN DK
Sbjct: 121 DYRHPWLFLNTLAVMVLVVAKFPNMHKVRIFGINGDK 157


>AT5G42000.2 | Symbols:  | ORMDL family protein |
           chr5:16799455-16799865 FORWARD LENGTH=109
          Length = 109

 Score =  202 bits (515), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 93/109 (85%), Positives = 102/109 (93%)

Query: 4   LYVKAVPPADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFSCSPGIAWTIVNLVHFLV 63
           +YV+A+P  D+NRNTEWFTYPGVWTTYILILFFSW+LVLSVF CSPGIAWTIV+L HF V
Sbjct: 1   MYVRALPTTDVNRNTEWFTYPGVWTTYILILFFSWLLVLSVFHCSPGIAWTIVHLAHFTV 60

Query: 64  TYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPLVL 112
           TYH FHWKKGTPF +DQG+YNRLTWWEQIDNGKQLTRNRKFLTVVP+VL
Sbjct: 61  TYHSFHWKKGTPFGDDQGVYNRLTWWEQIDNGKQLTRNRKFLTVVPVVL 109