Miyakogusa Predicted Gene

Lj3g3v2477630.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2477630.1 Non Chatacterized Hit- tr|Q3AX41|Q3AX41_SYNS9
Putative uncharacterized protein OS=Synechococcus sp. ,32.29,1e-18,no
description,FMN-binding split barrel; PPOX_FMN_cyano: PPOX class
probable FMN-dependent ,Pyridoxa,CUFF.44056.1
         (196 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46580.1 | Symbols:  | Pyridoxamine 5'-phosphate oxidase fami...   281   2e-76

>AT2G46580.1 | Symbols:  | Pyridoxamine 5'-phosphate oxidase family
           protein | chr2:19129409-19130513 REVERSE LENGTH=198
          Length = 198

 Score =  281 bits (720), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 127/198 (64%), Positives = 158/198 (79%), Gaps = 2/198 (1%)

Query: 1   MGS--VPWKQLLLNALESNAHLKHSSYMQLATVGTNGKPSNRTVVFRGFQDNTDNIQINT 58
           MG+   PWKQLL  A+E+N+HL HSSY+QLAT+G NG+PSNRTVVFRGF++N+D IQINT
Sbjct: 1   MGTHVAPWKQLLFGAIEANSHLSHSSYVQLATIGLNGRPSNRTVVFRGFEENSDRIQINT 60

Query: 59  DARTRKIEGLKVCSSAEICWYFTDSWEQFRINGNVDIIDGSNPDPLKLQQREKSWFASSL 118
           D R+RKIE LK C  +E+CWYF+D+WEQFRING +++ID SNPD  KLQQREK+WFA+SL
Sbjct: 61  DLRSRKIEELKHCPFSEMCWYFSDTWEQFRINGRIEVIDASNPDQTKLQQREKAWFANSL 120

Query: 119 RSRSQYMCPNPGLPCLNEQAQPEISLDPSTGPVDAFCLLILEPDGVDYLNLKNNQRLAFK 178
           RSR  Y+CP PG PC +EQ+  ++ LDPS+GPV  +CLL+LEP+ VDYLNLK NQRL F 
Sbjct: 121 RSRLIYVCPTPGSPCNSEQSSQQVKLDPSSGPVPEYCLLLLEPEKVDYLNLKTNQRLFFS 180

Query: 179 SRVGDAAKKSWVMERVNP 196
           S      +K W  E+VNP
Sbjct: 181 SMATGTGEKCWTSEKVNP 198