Miyakogusa Predicted Gene

Lj3g3v2476570.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2476570.2 Non Chatacterized Hit- tr|I1MKH6|I1MKH6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.42,0,WD40
repeat-like,WD40-repeat-containing domain; no description,WD40/YVTN
repeat-like-containing doma,CUFF.44069.2
         (2051 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46560.1 | Symbols:  | transducin family protein / WD-40 repe...  1478   0.0  

>AT2G46560.1 | Symbols:  | transducin family protein / WD-40 repeat
            family protein | chr2:19115570-19125856 REVERSE
            LENGTH=2513
          Length = 2513

 Score = 1478 bits (3827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 861/2025 (42%), Positives = 1165/2025 (57%), Gaps = 96/2025 (4%)

Query: 29   HLPLNLLRSEVVTPAPTFSDSTIDFLPHFAGYSWLAYGASSLLVITHFPSPLSPHQTRIG 88
            HLPL  LRSE+V PAPT S S+ID+LP FA YSWLAYGAS+L+VI+H PSPL    +  G
Sbjct: 26   HLPLRQLRSEIVPPAPTRSQSSIDWLPDFANYSWLAYGASTLVVISHLPSPLRGEDSTNG 85

Query: 89   PIFRQVFELSADHSSPVAAVSWCPDPPSSGALAAAAENCIWVFHHDSATSNGSFCWSQNA 148
            P FRQ+ E+S +   PV AV W P  PS G LA  + N I++F  D     GSFCWSQNA
Sbjct: 86   PFFRQILEVSGE---PVTAVCWSPVTPSVGELAVGSGNYIFLFARDL---KGSFCWSQNA 139

Query: 149  VLVQQTKVGAIRWTGSGDGIISGGMEVVFWKRINKCWEIAWKFKADQPQTLVSATWSIEG 208
            +LVQ+T V AI WTGSGDGII GG ++V WKR N+ WEIAWKF  D  Q LVS+TWS EG
Sbjct: 140  ILVQETIVEAIEWTGSGDGIIVGGTDIVLWKRRNQSWEIAWKFSGDHLQDLVSSTWSFEG 199

Query: 209  PSATAAHPSKEQIGGSLISEVSKCVLVCQSNGLSEYSKVKLHHPLPVVMIQWRPSRGKLN 268
            P ATA    K     +   +  K VL   S+G S Y   +L HP  + MIQWRP   + +
Sbjct: 200  PFATATSWRKFP---AECDDAGKSVLAYYSDGES-YHNFELPHPQRISMIQWRPMAAEQS 255

Query: 269  RYG-RNSIKNVLLTCCLDGTARLWSEIDNGKVRRAGKDINDQKNTGCSFCAVAVIEINQT 327
              G   S++NVL+TCCLDG  RLW E+D GK ++  KD+ D K    SFC  AVIEINQ 
Sbjct: 256  AIGIGKSMRNVLMTCCLDGAVRLWCEVDGGKTKKGMKDVPDHKK---SFCVAAVIEINQV 312

Query: 328  LNGVLGSDIFVSWGMEIEGIFRAGERIKQVFSKEGSEHD-VRKCDWLVGFGPGMLLSFWA 386
            L+G LG D+F+ WG    GIF+  E   QVFS E  +++ V KC+WLVG+GPG   + WA
Sbjct: 313  LDGCLGRDLFLFWGTRTGGIFKTIEGTNQVFSMEKYDNENVGKCEWLVGYGPGNFATLWA 372

Query: 387  VHCLDDVSPLRFPRVTLWRRIELQNQDIENVFKFDLSNFRNALVLHKVNTLRNCLSGPPM 446
            VHCLDD+SP+RFPRVTLW + E       ++     +   + L L KV+ LRN L G P+
Sbjct: 373  VHCLDDISPMRFPRVTLWAKQESNEIGAGSLSLASATGSSDRLPLKKVSVLRNNLYGTPL 432

Query: 447  ICSPLQLLPCNSLVWSFFHIQTLHDTVENSCDNDDTDNISSRLI---GGVLNLDGHSGKI 503
            ICS + L P N++ WS  H    HD+       D + N SS L    G VL LDGH GKI
Sbjct: 433  ICSSIYLSPQNTVYWSSLHTIKSHDS------EDSSPNKSSLLKCIDGKVLYLDGHGGKI 486

Query: 504  LKVSIHPYICKVQFAASLDSNGLLLFWSLSNISNSILGCPTLVPTWELLGKLATQDSCSK 563
            L+V+  P++C+  + ASLDSNGL++  S S   N  +  P  V +W+  G+L  Q+   K
Sbjct: 487  LQVASDPFVCEAGYTASLDSNGLIIICSSSVYLNRTIEHPISVASWKPCGRLQNQEFRLK 546

Query: 564  YTSLTWAPSIVGDKLVFFMGHTRGVDCFIVNISRTEEENIECHYLCTIPFSGHGPYEDGP 623
            YTSL WAPS + D+    +GH  GVDCF V      ++    HY+CTIPF+ + P + GP
Sbjct: 547  YTSLCWAPSSLKDERFLLVGHVGGVDCFSVRNCGKGDDGYLTHYICTIPFTVNSPLQSGP 606

Query: 624  SDIFAIPLTSTCNKTFCRNKLMPLAVWMG--KFQALSWEVNMHSFDISTSCCECNFDSNS 681
            + IFA PL+++C KTF  N+ + L+VWM   +F ALSW V +H FD + S C+C+F    
Sbjct: 607  TSIFAKPLSNSCGKTFKSNRFLLLSVWMKEKRFDALSWSVTLHHFDTAGSTCDCHFHDFD 666

Query: 682  LDDCSVWAFQSTFANKRYCVTVIPCSSEFPSS--DDMVTSFAVADSGTLSCKQQEFGFAS 739
                  W F+ TFA K  C+ +  CSSE P S  +D VTSFAV +    S +  E G  S
Sbjct: 667  SIGLGKWLFEDTFAGKTNCLAIRSCSSEIPESHREDEVTSFAVVNP---SGRDLENGVNS 723

Query: 740  DLCSSYPTYIMATGCFDGSLKLWKSNPGTPSTLHLPWELVGMFVAHDGPIKGICFADCGK 799
            +       Y +ATG  DGSLKLW+S+    ST    WELVGM      P+  I   D G 
Sbjct: 724  E----SQAYTIATGQADGSLKLWRSSFQESSTPSGLWELVGMLTVGQNPVSAISLTDSGH 779

Query: 800  KIATFCNKNKSNAVNTIHIWDAVNLITTGTFILEDKLTPESDVITLKWLALGTGDLLLGV 859
            KIA  C ++ S A   + IW+ V+LI +G FILEDK+  +++V+ ++W   G   LLLGV
Sbjct: 780  KIAALCTESHSKAARAVSIWEIVHLIDSGVFILEDKVHVDAEVVAVRWSTTGNDQLLLGV 839

Query: 860  CLQNGLHVY--AQKHYDGLNLSNSVSFPKMNLWVRIAFAHTDIPIYDFVWGPRAAAVVIH 917
            C Q  + VY  A++     + +      +  +W   A   T   I+D  WGP+A   ++H
Sbjct: 840  CTQIEMRVYGIARQPCKSTSFAAYDYSSEAQIWQCFAVTRTFSAIHDLWWGPKAMTCLVH 899

Query: 918  GNYFSIFSHWLFYMDKKQKSNFHPCHSEPNAYNCKGEIYEDILSAVFTDGDTGDFRELST 977
             +Y S+   WL  +DKKQK + +P     N  N      E   S   +D  T D  E  T
Sbjct: 900  NDYISLHGQWLAVVDKKQKIDNYPEIFASNLPNLVNATEEGRDSEFLSDSGTNDINEADT 959

Query: 978  GDSPADCDSKQSIKINIKDHNLSSSLFLAKEQLKSEPLTMVGLWSILEVAEIISGSLPTY 1037
              +   C    S    I D  ++S   +      +   T+  + S+  + E + G+LP Y
Sbjct: 960  TSTSRGCIPLPSTSNAIDDGQVNSMSLIGTAYGSN---TIDDIMSMGHMVEKLGGALPLY 1016

Query: 1038 HPDVLHTNISSGNWKRAYVALRHLVECLASNYDPQKKHISKRNALPNIILSYYFEGRILE 1097
            HP  L   I SGNWKRA  ALRHL E + S+   +K +  K    P+I+LS Y+EG +  
Sbjct: 1017 HPHALLVAIRSGNWKRASAALRHLAEYITSSDTSEKGYAVKSVLCPDILLSKYYEGSLSN 1076

Query: 1098 SSQDKGFHWSGDVSSMSSISQAPYYSGSSAENNSIPTSTRS-----ELNGFIESLEKFPD 1152
                K F W G   SM   SQ  + SG  ++ N    S  S     E +GF E L+K  D
Sbjct: 1077 GPNPKDFQWGGTSGSMLQYSQ--FQSGLQSKFNMESYSPNSPATDLEFSGFCEQLKKLSD 1134

Query: 1153 IPLWINIEKTQILAIIDLLSEVCXXXXXXAYQSLDEPGRRFWVSLRFQQLLFQRKFARAA 1212
                  IE  Q  AI+DLL E+        Y SLDEPGRRFWV+LRF+QL   R   + A
Sbjct: 1135 EGNISRIEILQYFAIVDLLCEISNPHSTSVYASLDEPGRRFWVTLRFKQLFLARSSGKTA 1194

Query: 1213 SFEELLVNSRLFVWAYHSDCLENLFGSVIPNEPSWQEMRALGMGFWFASIPQLRARMEKL 1272
            S EEL ++S +  WA+HS+  ENL GS++PNE SWQ+MR+ G GFW+++  QLR+RMEKL
Sbjct: 1195 SLEELDIDSSMIGWAFHSESQENLSGSLLPNESSWQQMRSQGFGFWYSNAAQLRSRMEKL 1254

Query: 1273 ARAQYLKSKNPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRNFQEEXXXXXXX 1332
            AR QYLK+KNPKDCALLYIALNR+QVLAGLFK+SKDEKDKPLV FLSRNFQEE       
Sbjct: 1255 ARQQYLKNKNPKDCALLYIALNRVQVLAGLFKLSKDEKDKPLVVFLSRNFQEEKNKAAAL 1314

Query: 1333 XXXYVLLGKHQLELAIAFFLLGGDHSSAINVCAKNLGDEQLALVICRLLEGHGGPLEHHL 1392
               YVL+GKHQLELAI FFLLGG+ SSAINVC KNL DEQLALVICRL++G GG LE +L
Sbjct: 1315 KNAYVLMGKHQLELAIGFFLLGGEASSAINVCVKNLQDEQLALVICRLIDGQGGALESNL 1374

Query: 1393 ITKYILPSAIDKGDYWLSSLLEWEMGNYYQSFYRMLEFSVNPVAQESTIMSNCGPFLDPT 1452
            I KYILPSA+ +GD+WL+SLL+WE+G Y++S   M     NP  + ST+ SN   F+DP+
Sbjct: 1375 IKKYILPSAVQRGDFWLASLLKWELGEYHRSILAMAGCLENPATESSTVSSNHVSFVDPS 1434

Query: 1453 VGSYCQMLASKNSMRNAVGEQNSAILLRWATLMTVTSLKRCGNPLEALEYFSSSLSMLGT 1512
            +G YC MLA+KNS++NA+GE+ ++ L RWA+LM  T+  RCG PLEALE  S S S  G 
Sbjct: 1435 IGLYCLMLATKNSVKNALGERTASTLSRWASLMAATAFSRCGLPLEALECLSPSASGHGG 1494

Query: 1513 ADQENELGDGHVVISSTL--KPLPRKSSNWLSTDVSVHLEFHIKLNLALCYLSKLIREHP 1570
              Q +   +G +  +  +    +P  SSNW+S+ VS  ++ H +L LA+ +LS ++RE  
Sbjct: 1495 THQTSVPSNGQLHTTQGVFDHSVPH-SSNWVSSGVSSTVDTHFRLGLAVQFLSMILRE-- 1551

Query: 1571 SWPDAASESDGEASCSDEYMLQYEKSVESFKQRLYKGLAVFEQRFLLAPSCLISMVXXXX 1630
                        A   +  ++  EK    F+ +L   L  F QRF L+ S L +M+    
Sbjct: 1552 ----------ATAPLMNSEVVSCEK-FSRFQHKLQTALEQFHQRFSLSASYLRNMMILSA 1600

Query: 1631 XXXXXXFIGHDMTDGCTQEEVSQKKSDIFDVFNLYHSPFKPFFKTAEEISFLYSRLFSAC 1690
                   +GH++    +   +S  KS   +    Y +  K   K  +E S + SR+ +AC
Sbjct: 1601 YNRGLLSMGHNIFQENSSSGLSDDKSHTDEDLLQYSALSKLILKATDEKSLVLSRIIAAC 1660

Query: 1691 SM---------EYSQRSSTPLEKDESKFLDSSHSHFEGLLVSLWYLRASLRTQLSSVSKD 1741
            S+         E ++ SS P    + K+ ++   +F+G+L S   LR S+R  L S  +D
Sbjct: 1661 SVTCLHSVPCFEENKVSSGP----DPKWSNALRFYFQGILESFSNLRTSIRLCLGSSVED 1716

Query: 1742 FIKKHVDILDYFEYYLYFSLAWLQKNSEALLLMVHPFLIENADGHNPYEIDMVNLKKLIP 1801
               K   +LD  EY L  ++AW+  +   L  MV P +I   +GH PYE+D+ ++K++  
Sbjct: 1717 LKTKLAVVLDLVEYCLRLAMAWVLGDVHCLFRMVQPLVISYFNGHMPYEVDLESVKRVYH 1776

Query: 1802 KIAQLLAQNSSVTNMENLQVSKCEEDKLVADVKHLVPDDERWKILGTCLWQHMSRFMISN 1861
            + A +   ++S   + N + S   E+  V    + +P+DER  +   C W+H+S F+   
Sbjct: 1777 QEASVSVPDASDVGV-NSKFSSVVENHGVGYPVYSIPEDERCLVTQACFWKHVSDFV--K 1833

Query: 1862 LNLVLAKIE-DDNLSGTFHKKHAYRELALINMDYDSISLPEKIQLVSFCLCDFLMTTVTH 1920
            L LV   I  DD +S +   ++   + +L + D D + + EKI  V   L   L++T+  
Sbjct: 1834 LKLVSISINLDDGISNSGSAENFDAQTSLDSSD-DIVCVTEKIMSV---LGKTLISTLAQ 1889

Query: 1921 ISSYHVKQLVEILWQKLEHDSNVMTLKWLKQTTASEYSHDRNLDI----LELVNRKDKCL 1976
            +SSYHVKQLV +L QKLE    V TL WL +   S+ ++  N DI    +E     D  +
Sbjct: 1890 LSSYHVKQLVLVLKQKLEKRLQVPTLLWLLECQGSQ-ANFLNRDIPDAGVETEKNGDPVV 1948

Query: 1977 AHQLLWDHCADPKLISDCFAQEKLD---WSKDLDHKPTKGWNDLY 2018
            + +  W  C DP L+ + F  E  D   WSK    KP + W+D+Y
Sbjct: 1949 SVR-FWKLCVDPHLLHEAFLLENFDIFEWSKS---KPLEDWSDMY 1989