Miyakogusa Predicted Gene

Lj3g3v2476570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2476570.1 Non Chatacterized Hit- tr|I1MKH6|I1MKH6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.44,0,WD40
repeat-like,WD40-repeat-containing domain; no description,WD40/YVTN
repeat-like-containing doma,CUFF.44069.1
         (1980 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46560.1 | Symbols:  | transducin family protein / WD-40 repe...  1351   0.0  

>AT2G46560.1 | Symbols:  | transducin family protein / WD-40 repeat
            family protein | chr2:19115570-19125856 REVERSE
            LENGTH=2513
          Length = 2513

 Score = 1351 bits (3496), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 794/1907 (41%), Positives = 1085/1907 (56%), Gaps = 90/1907 (4%)

Query: 76   NAVLVQQTKVGAIRWTGSGDGIISGGMEVVFWKRINKCWEIAWKFKADQPQTLVSATWSI 135
            NA+LVQ+T V AI WTGSGDGII GG ++V WKR N+ WEIAWKF  D  Q LVS+TWS 
Sbjct: 138  NAILVQETIVEAIEWTGSGDGIIVGGTDIVLWKRRNQSWEIAWKFSGDHLQDLVSSTWSF 197

Query: 136  EGPSATAAHPSKEQIGGSLISEVSKCVLVCQSNGLSEYSKVKLHHPLPVVMIQWRPSRGK 195
            EGP ATA    K     +   +  K VL   S+G S Y   +L HP  + MIQWRP   +
Sbjct: 198  EGPFATATSWRKFP---AECDDAGKSVLAYYSDGES-YHNFELPHPQRISMIQWRPMAAE 253

Query: 196  LNRYG-RNSIKNVLLTCCLDGTARLWSEIDNGKVRRAGKDINDQKNTGCSFCAVAVIEIN 254
             +  G   S++NVL+TCCLDG  RLW E+D GK ++  KD+ D K    SFC  AVIEIN
Sbjct: 254  QSAIGIGKSMRNVLMTCCLDGAVRLWCEVDGGKTKKGMKDVPDHKK---SFCVAAVIEIN 310

Query: 255  QTLNGVLGSDIFVSWGMEIEGIFRAGERIKQVFSKEGSEHD-VRKCDWLVGFGPGMLLSF 313
            Q L+G LG D+F+ WG    GIF+  E   QVFS E  +++ V KC+WLVG+GPG   + 
Sbjct: 311  QVLDGCLGRDLFLFWGTRTGGIFKTIEGTNQVFSMEKYDNENVGKCEWLVGYGPGNFATL 370

Query: 314  WAVHCLDDVSPLRFPRVTLWRRIELQNQDIENVFKFDLSNFRNALVLHKVNTLRNCLSGP 373
            WAVHCLDD+SP+RFPRVTLW + E       ++     +   + L L KV+ LRN L G 
Sbjct: 371  WAVHCLDDISPMRFPRVTLWAKQESNEIGAGSLSLASATGSSDRLPLKKVSVLRNNLYGT 430

Query: 374  PMICSPLQLLPCNSLVWSFFHIQTLHDTVENSCDNDDTDNISSRLI---GGVLNLDGHSG 430
            P+ICS + L P N++ WS  H    HD+       D + N SS L    G VL LDGH G
Sbjct: 431  PLICSSIYLSPQNTVYWSSLHTIKSHDS------EDSSPNKSSLLKCIDGKVLYLDGHGG 484

Query: 431  KILKVSIHPYICKVQFAASLDSNGLLLFWSLSNISNSILGCPTLVPTWELLGKLATQDSC 490
            KIL+V+  P++C+  + ASLDSNGL++  S S   N  +  P  V +W+  G+L  Q+  
Sbjct: 485  KILQVASDPFVCEAGYTASLDSNGLIIICSSSVYLNRTIEHPISVASWKPCGRLQNQEFR 544

Query: 491  SKYTSLTWAPSIVGDKLVFFMGHTRGVDCFIVNISRTEEENIECHYLCTIPFSGHGPYED 550
             KYTSL WAPS + D+    +GH  GVDCF V      ++    HY+CTIPF+ + P + 
Sbjct: 545  LKYTSLCWAPSSLKDERFLLVGHVGGVDCFSVRNCGKGDDGYLTHYICTIPFTVNSPLQS 604

Query: 551  GPSDIFAIPLTSTCNKTFCRNKLMPLAVWMG--KFQALSWEVNMHSFDISTSCCECNFDS 608
            GP+ IFA PL+++C KTF  N+ + L+VWM   +F ALSW V +H FD + S C+C+F  
Sbjct: 605  GPTSIFAKPLSNSCGKTFKSNRFLLLSVWMKEKRFDALSWSVTLHHFDTAGSTCDCHFHD 664

Query: 609  NSLDDCSVWAFQSTFANKRYCVTVIPCSSEFPSS--DDMVTSFAVADSGTLSCKQQEFGF 666
                    W F+ TFA K  C+ +  CSSE P S  +D VTSFAV +    S +  E G 
Sbjct: 665  FDSIGLGKWLFEDTFAGKTNCLAIRSCSSEIPESHREDEVTSFAVVNP---SGRDLENGV 721

Query: 667  ASDLCSSYPTYIMATGCFDGSLKLWKSNPGTPSTLHLPWELVGMFVAHDGPIKGICFADC 726
             S+       Y +ATG  DGSLKLW+S+    ST    WELVGM      P+  I   D 
Sbjct: 722  NSE----SQAYTIATGQADGSLKLWRSSFQESSTPSGLWELVGMLTVGQNPVSAISLTDS 777

Query: 727  GKKIATFCNKNKSNAVNTIHIWDAVNLITTGTFILEDKLTPESDVITLKWLALGTGDLLL 786
            G KIA  C ++ S A   + IW+ V+LI +G FILEDK+  +++V+ ++W   G   LLL
Sbjct: 778  GHKIAALCTESHSKAARAVSIWEIVHLIDSGVFILEDKVHVDAEVVAVRWSTTGNDQLLL 837

Query: 787  GVCLQNGLHVY--AQKHYDGLNLSNSVSFPKMNLWVRIAFAHTDIPIYDFVWGPRAAAVV 844
            GVC Q  + VY  A++     + +      +  +W   A   T   I+D  WGP+A   +
Sbjct: 838  GVCTQIEMRVYGIARQPCKSTSFAAYDYSSEAQIWQCFAVTRTFSAIHDLWWGPKAMTCL 897

Query: 845  IHGNYFSIFSHWLFYMDKKQKSNFHPCHSEPNAYNCKGEIYEDILSAVFTDGDTGDFREL 904
            +H +Y S+   WL  +DKKQK + +P     N  N      E   S   +D  T D  E 
Sbjct: 898  VHNDYISLHGQWLAVVDKKQKIDNYPEIFASNLPNLVNATEEGRDSEFLSDSGTNDINEA 957

Query: 905  STGDSPADCDSKQSIKINIKDHNLSSSLFLAKEQLKSEPLTMVGLWSILEVAEIISGSLP 964
             T  +   C    S    I D  ++S   +      +   T+  + S+  + E + G+LP
Sbjct: 958  DTTSTSRGCIPLPSTSNAIDDGQVNSMSLIGTAYGSN---TIDDIMSMGHMVEKLGGALP 1014

Query: 965  TYHPDVLHTNISSGNWKRAYVALRHLVECLASNYDPQKKHISKRNALPNIILSYYFEGRI 1024
             YHP  L   I SGNWKRA  ALRHL E + S+   +K +  K    P+I+LS Y+EG +
Sbjct: 1015 LYHPHALLVAIRSGNWKRASAALRHLAEYITSSDTSEKGYAVKSVLCPDILLSKYYEGSL 1074

Query: 1025 LESSQDKGFHWSGDVSSMSSISQAPYYSGSSAENNSIPTSTRS-----ELNGFIESLEKF 1079
                  K F W G   SM   SQ  + SG  ++ N    S  S     E +GF E L+K 
Sbjct: 1075 SNGPNPKDFQWGGTSGSMLQYSQ--FQSGLQSKFNMESYSPNSPATDLEFSGFCEQLKKL 1132

Query: 1080 PDIPLWINIEKTQILAIIDLLSEVCXXXXXXAYQSLDEPGRRFWVSLRFQQLLFQRKFAR 1139
             D      IE  Q  AI+DLL E+        Y SLDEPGRRFWV+LRF+QL   R   +
Sbjct: 1133 SDEGNISRIEILQYFAIVDLLCEISNPHSTSVYASLDEPGRRFWVTLRFKQLFLARSSGK 1192

Query: 1140 AASFEELLVNSRLFVWAYHSDCLENLFGSVIPNEPSWQEMRALGMGFWFASIPQLRARME 1199
             AS EEL ++S +  WA+HS+  ENL GS++PNE SWQ+MR+ G GFW+++  QLR+RME
Sbjct: 1193 TASLEELDIDSSMIGWAFHSESQENLSGSLLPNESSWQQMRSQGFGFWYSNAAQLRSRME 1252

Query: 1200 KLARAQYLKSKNPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRNFQEEXXXXX 1259
            KLAR QYLK+KNPKDCALLYIALNR+QVLAGLFK+SKDEKDKPLV FLSRNFQEE     
Sbjct: 1253 KLARQQYLKNKNPKDCALLYIALNRVQVLAGLFKLSKDEKDKPLVVFLSRNFQEEKNKAA 1312

Query: 1260 XXXXXYVLLGKHQLELAIAFFLLGGDHSSAINVCAKNLGDEQLALVICRLLEGHGGPLEH 1319
                 YVL+GKHQLELAI FFLLGG+ SSAINVC KNL DEQLALVICRL++G GG LE 
Sbjct: 1313 ALKNAYVLMGKHQLELAIGFFLLGGEASSAINVCVKNLQDEQLALVICRLIDGQGGALES 1372

Query: 1320 HLITKYILPSAIDKGDYWLSSLLEWEMGNYYQSFYRMLEFSVNPVAQESTIMSNCGPFLD 1379
            +LI KYILPSA+ +GD+WL+SLL+WE+G Y++S   M     NP  + ST+ SN   F+D
Sbjct: 1373 NLIKKYILPSAVQRGDFWLASLLKWELGEYHRSILAMAGCLENPATESSTVSSNHVSFVD 1432

Query: 1380 PTVGSYCQMLASKNSMRNAVGEQNSAILLRWATLMTVTSLKRCGNPLEALEYFSSSLSML 1439
            P++G YC MLA+KNS++NA+GE+ ++ L RWA+LM  T+  RCG PLEALE  S S S  
Sbjct: 1433 PSIGLYCLMLATKNSVKNALGERTASTLSRWASLMAATAFSRCGLPLEALECLSPSASGH 1492

Query: 1440 GTADQENELGDGHVVISSTL--KPLPRKSSNWLSTDVSVHLEFHIKLNLALCYLSKLIRE 1497
            G   Q +   +G +  +  +    +P  SSNW+S+ VS  ++ H +L LA+ +LS ++RE
Sbjct: 1493 GGTHQTSVPSNGQLHTTQGVFDHSVPH-SSNWVSSGVSSTVDTHFRLGLAVQFLSMILRE 1551

Query: 1498 HPSWPDAASESDGEASCSDEYMLQYEKSVESFKQRLYKGLAVFEQRFLLAPSCLISMVXX 1557
                          A   +  ++  EK    F+ +L   L  F QRF L+ S L +M+  
Sbjct: 1552 ------------ATAPLMNSEVVSCEK-FSRFQHKLQTALEQFHQRFSLSASYLRNMMIL 1598

Query: 1558 XXXXXXXXFIGHDMTDGCTQEEVSQKKSDIFDVFNLYHSPFKPFFKTAEEISFLYSRLFS 1617
                     +GH++    +   +S  KS   +    Y +  K   K  +E S + SR+ +
Sbjct: 1599 SAYNRGLLSMGHNIFQENSSSGLSDDKSHTDEDLLQYSALSKLILKATDEKSLVLSRIIA 1658

Query: 1618 ACSM---------EYSQRSSTPLEKDESKFLDSSHSHFEGLLVSLWYLRASLRTQLSSVS 1668
            ACS+         E ++ SS P    + K+ ++   +F+G+L S   LR S+R  L S  
Sbjct: 1659 ACSVTCLHSVPCFEENKVSSGP----DPKWSNALRFYFQGILESFSNLRTSIRLCLGSSV 1714

Query: 1669 KDFIKKHVDILDYFEYYLYFSLAWLQKNSEALLLMVHPFLIENADGHNPYEIDMVNLKKL 1728
            +D   K   +LD  EY L  ++AW+  +   L  MV P +I   +GH PYE+D+ ++K++
Sbjct: 1715 EDLKTKLAVVLDLVEYCLRLAMAWVLGDVHCLFRMVQPLVISYFNGHMPYEVDLESVKRV 1774

Query: 1729 IPKIAQLLAQNSSVTNMENLQVSKCEEDKLVADVKHLVPDDERWKILGTCLWQHMSRFMI 1788
              + A +   ++S   + N + S   E+  V    + +P+DER  +   C W+H+S F+ 
Sbjct: 1775 YHQEASVSVPDASDVGV-NSKFSSVVENHGVGYPVYSIPEDERCLVTQACFWKHVSDFV- 1832

Query: 1789 SNLNLVLAKIE-DDNLSGTFHKKHAYRELALINMDYDSISLPEKIQLVSFCLCDFLMTTV 1847
              L LV   I  DD +S +   ++   + +L + D D + + EKI  V   L   L++T+
Sbjct: 1833 -KLKLVSISINLDDGISNSGSAENFDAQTSLDSSD-DIVCVTEKIMSV---LGKTLISTL 1887

Query: 1848 THISSYHVKQLVEILWQKLEHDSNVMTLKWLKQTTASEYSHDRNLDI----LELVNRKDK 1903
              +SSYHVKQLV +L QKLE    V TL WL +   S+ ++  N DI    +E     D 
Sbjct: 1888 AQLSSYHVKQLVLVLKQKLEKRLQVPTLLWLLECQGSQ-ANFLNRDIPDAGVETEKNGDP 1946

Query: 1904 CLAHQLLWDHCADPKLISDCFAQEKLD---WSKDLDHKPTKGWNDLY 1947
             ++ +  W  C DP L+ + F  E  D   WSK    KP + W+D+Y
Sbjct: 1947 VVSVR-FWKLCVDPHLLHEAFLLENFDIFEWSKS---KPLEDWSDMY 1989