Miyakogusa Predicted Gene

Lj3g3v2455430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2455430.1 Non Chatacterized Hit- tr|F6I6F2|F6I6F2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,72.82,0,Importin-beta N-terminal domain,Importin-beta, N-terminal;
IMPORTIN-ALPHA RE-EXPORTER (CHROMOSOME SE,CUFF.44050.1
         (975 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46520.1 | Symbols:  | cellular apoptosis susceptibility prot...  1417   0.0  
AT3G59020.1 | Symbols:  | ARM repeat superfamily protein | chr3:...    76   1e-13
AT3G59020.2 | Symbols:  | ARM repeat superfamily protein | chr3:...    75   2e-13
AT1G26170.1 | Symbols:  | ARM repeat superfamily protein | chr1:...    68   2e-11
AT2G31660.1 | Symbols: SAD2, URM9 | ARM repeat superfamily prote...    65   2e-10

>AT2G46520.1 | Symbols:  | cellular apoptosis susceptibility
           protein, putative / importin-alpha re-exporter, putative
           | chr2:19096867-19099785 FORWARD LENGTH=972
          Length = 972

 Score = 1417 bits (3667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/979 (69%), Positives = 815/979 (83%), Gaps = 13/979 (1%)

Query: 1   MKWNPQTLQFLSECFLHTLSPAPEPRRRAESSLADAAAQPNFALAVIRLVAEPSIDEQIR 60
           M+WN +TL FLS+CFL+TLSP PEPRR AE +L+DAA Q N+ LAV+RLVAEP+IDEQ R
Sbjct: 1   MEWNRETLVFLSQCFLNTLSPIPEPRRTAERALSDAADQANYGLAVLRLVAEPAIDEQTR 60

Query: 61  QPAAVTFKNHLRLRW----STDDAPILEPEKEQIKTLIVPLMLSATPKIQAQLSEALAII 116
             AAV FKNHLR RW     +  +PI++ EKEQIKTLIV LMLSA+P+IQ+QLSEAL +I
Sbjct: 61  HAAAVNFKNHLRSRWHPAGDSGISPIVDSEKEQIKTLIVSLMLSASPRIQSQLSEALTVI 120

Query: 117 SNHDFPKSWPQLLPELISSLQTASQASDYASINGILRTANSIFKKFRFQYKTNDLLLDLK 176
             HDFPK+WP LLPELI++LQ A+ A DY S+NGIL TA+SIFKKF ++Y+T+ L +DLK
Sbjct: 121 GKHDFPKAWPALLPELIANLQNAALAGDYVSVNGILGTASSIFKKFSYEYRTDALFVDLK 180

Query: 177 TCLDNFARPLLEIFLKTASLIDXXXXXXXXXXXXLRPLFESQRLCCRIFYSLNFQELPEF 236
            CLDNFA PL EIFLKT+SLID            L+PLFESQRLCC IFYSLNFQ+LPEF
Sbjct: 181 YCLDNFAAPLTEIFLKTSSLIDSAASSGGSPPI-LKPLFESQRLCCTIFYSLNFQDLPEF 239

Query: 237 FEDHMGEWMNQFRKYLTTSYPALEGSGPDGVALVDDLRAAVCENINLYMEKNEEEFQGFL 296
           FEDHM EWM +F+KYL+++YPALE S  +G+ LVDDLRAA+CENIN Y+EKNEEEFQGFL
Sbjct: 240 FEDHMKEWMGEFKKYLSSNYPALE-STEEGLTLVDDLRAAICENINHYIEKNEEEFQGFL 298

Query: 297 NDFALAVWTLLGNVSQSSSRDRLAITAIRFLTTVSTSVHHALFAGDGVIPQICQGIVIPN 356
           N+FA  VWTLL +VS+S SRD+LA TAI+FLT+VSTSVHHALFAGD VI +ICQ IVIPN
Sbjct: 299 NEFASVVWTLLRDVSKSPSRDQLATTAIKFLTSVSTSVHHALFAGDNVIKEICQSIVIPN 358

Query: 357 VRLREDDEELFEMNYIEFIRRDMEGSDLDTRRRIACELLKGIATHYGDAVRSIVSAQIQS 416
           V LR +DEE+FEMNYIEFIRRDMEGSD+DTRRRIACELLKG+AT+Y   V  +VS +IQ 
Sbjct: 359 VSLRVEDEEIFEMNYIEFIRRDMEGSDVDTRRRIACELLKGLATNYKTQVTEVVSLEIQR 418

Query: 417 LLSSFNANPVANWKDKDCAIYLVVSLATKKAGTSYVSTELVDVPSFFEAVIVPELVIAPE 476
           LLSSF+ANP ANWKDKDCAIYLVVSL+TKKAG + VST+L+DV +FF  +I+PEL     
Sbjct: 419 LLSSFSANPSANWKDKDCAIYLVVSLSTKKAGGASVSTDLIDVQNFFANIILPEL----- 473

Query: 477 QQRDVNKHPMLKAGALKFFTMFRTQISKHVALKFFPNLVNFLAAESNVVHSYAASCIEKL 536
           Q RDVN  PMLKAG+LKF TMFR+ I K  A++ FP LV FL AESNVVHSYAASCIEKL
Sbjct: 474 QSRDVNSFPMLKAGSLKFLTMFRSHIPKPFAMQLFPELVRFLKAESNVVHSYAASCIEKL 533

Query: 537 LLVKDEGGRA-RYTSADINPFFEMLMINLFGTFKLPESEENQYVMKCIMRVLGVADITVD 595
           LLVK+EG R  RY + D++PF   LM NLF   K PESEENQY+MKCIMRVLGVADI+ +
Sbjct: 534 LLVKEEGARGNRYAAGDLSPFLLQLMTNLFDALKFPESEENQYLMKCIMRVLGVADISAE 593

Query: 596 VARFCIEGLASLLSEVCKNPKNPIFNHYLFESVAILVRRACERDSSLVSVFETSLFPRLQ 655
           VA  CI GL S+LSEVCKNPKNPIFNHYLFESVA+LVRRACERD SL+S FETSLFP LQ
Sbjct: 594 VAGPCIGGLTSILSEVCKNPKNPIFNHYLFESVAVLVRRACERDISLISAFETSLFPSLQ 653

Query: 656 IILSNDVTEFFPYTFQLLAQLVELNRPPIPPLYMQIFEILLSPESWKRASNVPALVRLLQ 715
           +IL+ND+TEF PY FQLLAQLVELNRP + P YMQIF +LLSPESWKR+ NVPALVRLLQ
Sbjct: 654 MILANDITEFLPYGFQLLAQLVELNRPTLSPNYMQIFLLLLSPESWKRSGNVPALVRLLQ 713

Query: 716 AFLQKAPNQICQGDRLTKVLGIFDTLIQASSTSEQGFYVLNTVIESLEYDAIKPYISHIW 775
           AFLQKAP+++ Q +RL++VLGIF+ L+ + ST EQGFY+LNT+IE+L+Y  I PY+  +W
Sbjct: 714 AFLQKAPHEVTQENRLSQVLGIFEKLVASPSTDEQGFYILNTIIENLDYSVIAPYMKGVW 773

Query: 776 AALFRELQRRRTSVKLIKSLLIFMSLFLIKHGTSNVVDTMNSVQPGIFTMILNQFWIPNL 835
           +ALF  +Q ++T VK  KSL+IFMSLFL+KHG + +V+TMN+VQP I T I+  FWIPNL
Sbjct: 774 SALFTRVQNKKT-VKFQKSLVIFMSLFLVKHGQAYLVETMNTVQPNIITAIVEHFWIPNL 832

Query: 836 KLITGAIELKLTAVASTRLICESPVLLDPAASASWGKMVDSIVTLLSRPEEDRVEEELDM 895
           KLI G++E+KLTAVA+TRLICE+P LLDP+A+  WGKM+DSIVTL+SRPE++RV +E +M
Sbjct: 833 KLIMGSMEVKLTAVAATRLICETPALLDPSAAKLWGKMLDSIVTLVSRPEQERVLDEPEM 892

Query: 896 PDIAENVGYTATFVRLYNAGKKEEDPLKDIADPRQFFVASLSQLSTVSPGRYPKVISENV 955
           P+I+ENVGYTA FV+L+NAGKKEEDPLKDI DP+QF VAS+S+LS+ SPGRYP++I EN+
Sbjct: 893 PEISENVGYTAAFVKLHNAGKKEEDPLKDIKDPKQFLVASVSRLSSASPGRYPQIIGENL 952

Query: 956 DPANQSALVQLCNTYNHSI 974
           + ANQ+AL+QLCN YN  I
Sbjct: 953 EQANQTALIQLCNAYNCGI 971


>AT3G59020.1 | Symbols:  | ARM repeat superfamily protein |
           chr3:21810973-21817418 REVERSE LENGTH=1029
          Length = 1029

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 26/253 (10%)

Query: 18  TLSPAPEPRRRAESSLADAAAQPNFALAVIRLVAEPSIDEQIRQPAAVTFKNHLRLRW-- 75
             SP P+ RR AE SL      P   + +++++ +   D  +RQ A++ FKN +   W  
Sbjct: 14  AFSPNPDERRAAEQSLNQLQHTPQHLIRILQIIVDGGSDLSVRQSASIHFKNFIAKHWEP 73

Query: 76  -STDDAPILEPEKEQIKTLIVPLMLSATPKIQAQLSEALAIISNHDFPKSWPQLLPELIS 134
            S D   IL  +K  ++  I+  +    P ++ Q+ E L  I   D+P+ WP+LL  +  
Sbjct: 74  HSGDQNIILPSDKNVVRNQILVFVSQVPPILRVQMGECLKTIIYADYPEQWPELLDWVKQ 133

Query: 135 SLQTASQASDYASINGILRTANSIFKKFRFQYKTNDLLLDLKTCLDNFARPLLEIFLKTA 194
           +LQ   +   Y ++  +LR  +S     ++++K+++    +   ++     LL IF    
Sbjct: 134 NLQ---KPQVYGAL-FVLRILSS-----KYEFKSDEDRAPIHRVVEETFPHLLNIFNNLV 184

Query: 195 SLIDXXXXXXXXXXXXLRPLFESQRLCCRIFYSLNFQELPE--FFEDHMGEWMNQFRKYL 252
            + +                 +  +L C+IF+S  + ELP   F  +    WM  F   L
Sbjct: 185 HVENPSLEVA-----------DHIKLICKIFWSCIYLELPRPLFDPNFFNAWMGLFLNIL 233

Query: 253 TTSYPALEGSGPD 265
               P +EG   D
Sbjct: 234 ERPVP-VEGQPED 245


>AT3G59020.2 | Symbols:  | ARM repeat superfamily protein |
           chr3:21810973-21817418 REVERSE LENGTH=1030
          Length = 1030

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 26/253 (10%)

Query: 18  TLSPAPEPRRRAESSLADAAAQPNFALAVIRLVAEPSIDEQIRQPAAVTFKNHLRLRW-- 75
             SP P+ RR AE SL      P   + +++++ +   D  +RQ A++ FKN +   W  
Sbjct: 14  AFSPNPDERRAAEQSLNQLQHTPQHLIRILQIIVDGGSDLSVRQSASIHFKNFIAKHWEP 73

Query: 76  -STDDAPILEPEKEQIKTLIVPLMLSATPKIQAQLSEALAIISNHDFPKSWPQLLPELIS 134
            S D   IL  +K  ++  I+  +    P ++ Q+ E L  I   D+P+ WP+LL  +  
Sbjct: 74  HSGDQNIILPSDKNVVRNQILVFVSQVPPILRVQMGECLKTIIYADYPEQWPELLDWVKQ 133

Query: 135 SLQTASQASDYASINGILRTANSIFKKFRFQYKTNDLLLDLKTCLDNFARPLLEIFLKTA 194
           +LQ   +   Y ++  +LR  +S     ++++K+++    +   ++     LL IF    
Sbjct: 134 NLQ---KPQVYGAL-FVLRILSS-----KYEFKSDEDRAPIHRVVEETFPHLLNIFNNLV 184

Query: 195 SLIDXXXXXXXXXXXXLRPLFESQRLCCRIFYSLNFQELPE--FFEDHMGEWMNQFRKYL 252
            + +                 +  +L C+IF+S  + ELP   F  +    WM  F   L
Sbjct: 185 HVENPSLEVA-----------DHIKLICKIFWSCIYLELPRPLFDPNFFNAWMGLFLNIL 233

Query: 253 TTSYPALEGSGPD 265
               P +EG   D
Sbjct: 234 ERPVP-VEGQPED 245


>AT1G26170.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:9047539-9054438 REVERSE LENGTH=1022
          Length = 1022

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 8/153 (5%)

Query: 6   QTLQFLSECFLHTLSPAPEPRRRAESSLADAAAQPNFALAVIRLVAEPSIDEQIRQPAAV 65
           Q  Q+L  C   +L P    R  AE+SL  A+ QP F  A+ R+ A   +   +RQ AAV
Sbjct: 5   QDQQWLLGCLSASLDPNQNVRSFAETSLNQASLQPGFGSALCRVAANKDLSLGLRQLAAV 64

Query: 66  TFKNHLRLRWSTDDAPILEP-----EKEQIKTLIVPLMLSATPKIQAQLSEALAIISNHD 120
             K  ++  W  ++     P     EK  I+  ++  +  +  KI   +S  ++ I+ +D
Sbjct: 65  LLKQFIKKHWRENEEAFEYPLVSSEEKALIRGQLLGSLDDSHRKICTAISMDISSIATYD 124

Query: 121 FPKSWPQLLPELISSLQTASQASDYASINGILR 153
           +P+ WP+L+P L   L+  S  S+   ++G LR
Sbjct: 125 WPEEWPELVPFL---LKLISDPSNTNGVHGALR 154


>AT2G31660.1 | Symbols: SAD2, URM9 | ARM repeat superfamily protein
           | chr2:13464519-13471353 FORWARD LENGTH=1040
          Length = 1040

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 27/224 (12%)

Query: 18  TLSPAPEPRRRAESSLADAAAQPNFALAVIRLVAEPSIDEQIRQPAAVTFKNHLRLRWST 77
            LSP P+ R+ +E  L      P   + ++++  + + D  +RQ A++ FKN +   WS 
Sbjct: 14  ALSPIPDERKVSEQQLNQLEHTPQHLVRLLQIAVDGNCDMAVRQIASIQFKNLIAKNWSP 73

Query: 78  DDA-------PILEPEKEQIKTLIVPLMLSATPKIQAQLSEALAIISNHDFPKSWPQLLP 130
           +D         I E +KE ++  I+  +      +++QL E+L  I   D+P+ WP+LL 
Sbjct: 74  EDCGPAVRQQQIFESDKELVRDNILVYVTQVPTLLRSQLGESLKTIIYADYPEQWPRLLD 133

Query: 131 ELISSLQTASQASDYASINGILRTANSIFKKFRFQYKTNDLLLDLKTCLDNFARPLLEIF 190
            +  +LQ          I G L     + +K+ F  K+++    +   ++     LL IF
Sbjct: 134 WVKYNLQN-------QQIYGALFVLRILSRKYEF--KSDEERTPVSRIVEETFPQLLTIF 184

Query: 191 LKTASLIDXXXXXXXXXXXXLRPLFESQRLCCRIFYSLNFQELP 234
                + +               + E  +L C+IF+S  + ELP
Sbjct: 185 NGLIQIPNPSLE-----------IAELMKLICKIFWSSIYLELP 217