Miyakogusa Predicted Gene
- Lj3g3v2453400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2453400.1 Non Chatacterized Hit- tr|K4AZZ7|K4AZZ7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.11,0.000000000000004,seg,NULL; DUF688,Protein of unknown
function DUF688,NODE_46355_length_977_cov_20.421700.path2.1
(208 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00950.1 | Symbols: MEE47 | Protein of unknown function (DUF6... 70 1e-12
AT5G53030.1 | Symbols: | unknown protein; CONTAINS InterPro DOM... 61 6e-10
AT4G27810.1 | Symbols: | unknown protein; CONTAINS InterPro DOM... 59 3e-09
AT5G53030.2 | Symbols: | unknown protein; CONTAINS InterPro DOM... 55 3e-08
>AT4G00950.1 | Symbols: MEE47 | Protein of unknown function (DUF688)
| chr4:405984-407087 REVERSE LENGTH=291
Length = 291
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 92/204 (45%), Gaps = 58/204 (28%)
Query: 4 EAEHEQSSMLKLTLFSVPATQMQSPERSGMLTPPINTS--AAVPFRWEQEPGKPK----- 56
EAE E LT+ +P + S ++ PI++S A+VPF WE+EPGKPK
Sbjct: 2 EAEKETEQEGNLTVMKLPVLPTKPNTHSHSMSSPIHSSISASVPFSWEEEPGKPKQHSTS 61
Query: 57 ----------LCNALITFD-NKCLVLPPRL------------------LTPSPYVAST-- 85
+ F+ +K L LPPRL + PY +T
Sbjct: 62 SSSSSSSSPLTSYSSSPFETHKSLELPPRLHLLEKDGGSVTKLHSPITVFDGPYSMTTSK 121
Query: 86 RFRSPSFK-MSKG-YNCYGSSFSADNKGLL---------------GAMVLVKDTDR--WF 126
R SPSF+ M KG +CYG SF +D G L G++ +VK R +F
Sbjct: 122 RMDSPSFRMMVKGSADCYG-SFRSDIDGDLEDLEVGSKQQENLSSGSLAVVKKRGRLGFF 180
Query: 127 GSWRKKAFKVKREVAGGSHVFPSS 150
G R++A K K E GS+VFPSS
Sbjct: 181 GFRRRRALKGKTEFGRGSYVFPSS 204
>AT5G53030.1 | Symbols: | unknown protein; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF688
(InterPro:IPR007789); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27810.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink). | chr5:21505319-21506329 FORWARD LENGTH=245
Length = 245
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 90/226 (39%), Gaps = 42/226 (18%)
Query: 10 SSMLKLTLFSVPATQMQSPERSGMLTPPINTSAAVPFRWEQEPGKPKLCNALITFDNKCL 69
S+ +L LFS P + G+ TPP+N + +VPF WE+ PGKP+ + K +
Sbjct: 14 STRKQLPLFSYPMNNIAYETTPGLATPPVNIAGSVPFLWEEAPGKPRRVKKPARLNQKGV 73
Query: 70 V----LPPRLLTPSPYVASTRFRSPSFKMSKGYNCYGSSFS-----ADNKGLLGAMV--- 117
V LPPRL+ P SP+ + Y+ S S A + L G
Sbjct: 74 VRSLELPPRLVLPGESTTVNE-PSPTTVLDGPYDLRRRSLSLPRSAAVIRKLRGVPAPAP 132
Query: 118 -----LVKDTDRW---------------FGSWRKKAFKVKREVAGGSHVFPSSDATADTH 157
LV + RW F +R + +R+ AGG + D
Sbjct: 133 EKEERLVGGSSRWGSFGNCKEVSEGIFDFSRFRDDGYDCRRDWAGGGG---VGNFAGDAK 189
Query: 158 NKLIKCXXXXXXXXLPH-GKSRFW----TSIREGMKQVVPSWRSKK 198
KL + L H KS FW + EG KQV+P W+ K+
Sbjct: 190 VKLYRIIKKGSFFNLSHTTKSDFWLKMQARVYEGFKQVIP-WKRKQ 234
>AT4G27810.1 | Symbols: | unknown protein; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF688
(InterPro:IPR007789); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G53030.1); Has 73
Blast hits to 66 proteins in 11 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr4:13854641-13855671 REVERSE LENGTH=196
Length = 196
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 41/198 (20%)
Query: 14 KLTLFSVPATQMQSPERSGMLTPPINTSAAVPFRWEQEPGKPKLCNALITFDNK------ 67
KL LFS+P + + + G+ TPP+N + +VPF WE+ PGKP++ + +K
Sbjct: 16 KLPLFSIPFNR--ACDTPGLATPPVNIAGSVPFLWEEAPGKPRVSDENKPLASKQNEREG 73
Query: 68 -------CLVLPPRLLTPSPYVASTRFRSPSFKMSKGYNCYGSSFSADNKGLLGAMVLVK 120
CL LPPRL P+ SP+ + Y+ S S +++
Sbjct: 74 GGGGVVRCLELPPRLFFPADDEP-----SPTTVLDGPYDVPRRSLS-----------VIR 117
Query: 121 DTDRWFGSWRKKAFKVKREVAGGSHVFPSSDATADTHNKLIKCXXXXXXXXLPHGKSRFW 180
++R + F+ R D T K+ + L H KS+F
Sbjct: 118 RSER----ASEGRFEFSRSTNSR-----CCDGGGGTTVKISRVRRKGSLLNLSHSKSQFL 168
Query: 181 TSIREGMKQVVPSWRSKK 198
+ +G KQV+P WR ++
Sbjct: 169 ARVYQGFKQVIP-WRRRQ 185
>AT5G53030.2 | Symbols: | unknown protein; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF688
(InterPro:IPR007789); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27810.1); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink). | chr5:21505319-21505993 FORWARD
LENGTH=224
Length = 224
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 10 SSMLKLTLFSVPATQMQSPERSGMLTPPINTSAAVPFRWEQEPGKPKLCNALITFDNKCL 69
S+ +L LFS P + G+ TPP+N + +VPF WE+ PGKP+ + K +
Sbjct: 14 STRKQLPLFSYPMNNIAYETTPGLATPPVNIAGSVPFLWEEAPGKPRRVKKPARLNQKGV 73
Query: 70 V----LPPRLLTP 78
V LPPRL+ P
Sbjct: 74 VRSLELPPRLVLP 86