Miyakogusa Predicted Gene

Lj3g3v2443200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2443200.1 Non Chatacterized Hit- tr|K4D9P6|K4D9P6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,89.8,2e-19,DUF966,Protein of unknown function DUF966; FAMILY
NOT NAMED,NULL,NODE_121824_length_114_cov_11.061403.path3.1
         (52 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28150.1 | Symbols:  | Domain of unknown function (DUF966) | ...   103   3e-23
AT5G59790.1 | Symbols:  | Domain of unknown function (DUF966) | ...    82   6e-17
AT3G46110.1 | Symbols:  | Domain of unknown function (DUF966) | ...    79   7e-16
AT3G46110.2 | Symbols:  | Domain of unknown function (DUF966) | ...    79   8e-16
AT5G10150.1 | Symbols:  | Domain of unknown function (DUF966) | ...    72   1e-13
AT1G05577.1 | Symbols:  | Domain of unknown function (DUF966) | ...    66   4e-12

>AT2G28150.1 | Symbols:  | Domain of unknown function (DUF966) |
           chr2:12000015-12002227 FORWARD LENGTH=540
          Length = 540

 Score =  103 bits (256), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 46/52 (88%), Positives = 51/52 (98%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFDESNSDNF 52
           MAS+YSWS KRSY++GFVWHDLSEDDLILPA+GNEYVLKGSELFDESNSD+F
Sbjct: 79  MASMYSWSSKRSYRNGFVWHDLSEDDLILPANGNEYVLKGSELFDESNSDHF 130


>AT5G59790.1 | Symbols:  | Domain of unknown function (DUF966) |
           chr5:24090950-24092804 FORWARD LENGTH=423
          Length = 423

 Score = 82.4 bits (202), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 38/45 (84%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFD 45
           MASLYSWS KRSYK+GFVWHDLSEDD I P  G EYVLKGSE+ D
Sbjct: 92  MASLYSWSSKRSYKNGFVWHDLSEDDFIFPVQGQEYVLKGSEVLD 136


>AT3G46110.1 | Symbols:  | Domain of unknown function (DUF966) |
           chr3:16932244-16933588 FORWARD LENGTH=343
          Length = 343

 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 44/53 (83%), Gaps = 1/53 (1%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFD-ESNSDNF 52
           MA LYSWS KR+YK+GFVW+DLS++D I P HG EYVLKGS++ D ++NS NF
Sbjct: 65  MACLYSWSSKRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQILDLDNNSGNF 117


>AT3G46110.2 | Symbols:  | Domain of unknown function (DUF966) |
           chr3:16932244-16933359 FORWARD LENGTH=311
          Length = 311

 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 44/53 (83%), Gaps = 1/53 (1%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFD-ESNSDNF 52
           MA LYSWS KR+YK+GFVW+DLS++D I P HG EYVLKGS++ D ++NS NF
Sbjct: 65  MACLYSWSSKRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQILDLDNNSGNF 117


>AT5G10150.1 | Symbols:  | Domain of unknown function (DUF966) |
           chr5:3182176-3183834 REVERSE LENGTH=414
          Length = 414

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/46 (63%), Positives = 39/46 (84%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFDE 46
           M S Y+WSCKRSY++GFVW+DL+E+D+I P+   EYVLKGSE+ D+
Sbjct: 91  MTSQYAWSCKRSYRNGFVWNDLAENDVIYPSDCAEYVLKGSEITDK 136


>AT1G05577.1 | Symbols:  | Domain of unknown function (DUF966) |
           chr1:1662643-1664288 REVERSE LENGTH=372
          Length = 372

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 37/52 (71%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFDESNSDNF 52
           M   +SWSCKR YK+G+VW DL +DDLI P   NEYVLKGSE+   S  +++
Sbjct: 58  MPDAFSWSCKRRYKNGYVWQDLLDDDLITPISDNEYVLKGSEILLSSPKEDY 109