Miyakogusa Predicted Gene

Lj3g3v2441870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2441870.1 Non Chatacterized Hit- tr|I1L624|I1L624_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.65,0,no
description,Tetratricopeptide-like helical; HCP-like,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT N,CUFF.44013.1
         (702 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G19890.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   884   0.0  
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-...   285   1e-76
AT5G65560.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   278   1e-74
AT4G11690.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   264   1e-70
AT1G05670.2 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   261   9e-70
AT1G05670.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   261   9e-70
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su...   259   5e-69
AT1G74580.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   253   5e-67
AT2G02150.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   248   8e-66
AT1G09900.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   246   3e-65
AT5G01110.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   244   1e-64
AT5G61400.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   240   2e-63
AT5G64320.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   239   5e-63
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232...   239   7e-63
AT1G62930.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   237   2e-62
AT5G59900.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   235   6e-62
AT2G01740.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   235   9e-62
AT1G62680.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   234   1e-61
AT3G22470.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   232   5e-61
AT1G12700.1 | Symbols:  | ATP binding;nucleic acid binding;helic...   232   5e-61
AT1G12300.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   232   7e-61
AT1G12775.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   231   1e-60
AT4G28010.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   231   2e-60
AT3G07290.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   230   3e-60
AT3G16710.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   228   1e-59
AT5G55840.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   227   2e-59
AT1G63080.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   227   3e-59
AT1G63130.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   224   1e-58
AT1G62910.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   224   1e-58
AT4G19440.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   224   2e-58
AT4G19440.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   224   2e-58
AT1G12620.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   223   4e-58
AT1G64100.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...   222   7e-58
AT1G63400.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   222   9e-58
AT5G61990.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   220   2e-57
AT1G63330.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   219   4e-57
AT1G31840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   219   6e-57
AT1G62720.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   219   6e-57
AT1G63150.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   219   6e-57
AT1G09680.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   218   8e-57
AT1G06710.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   218   1e-56
AT2G16880.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   218   1e-56
AT1G62590.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...   218   2e-56
AT1G52620.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   218   2e-56
AT3G04760.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   218   2e-56
AT1G64580.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   217   2e-56
AT2G15630.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   216   5e-56
AT1G09820.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   214   2e-55
AT2G17140.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   213   4e-55
AT1G31840.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   213   5e-55
AT1G64100.2 | Symbols:  | pentatricopeptide (PPR) repeat-contain...   212   6e-55
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr...   211   1e-54
AT3G06920.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   209   4e-54
AT5G41170.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   209   5e-54
AT2G32630.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   209   5e-54
AT3G09060.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   208   1e-53
AT1G30290.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   208   1e-53
AT1G63070.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...   207   1e-53
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ...   207   1e-53
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381...   206   5e-53
AT5G16640.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   206   5e-53
AT2G19280.2 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   205   1e-52
AT2G19280.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   205   1e-52
AT1G62914.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...   204   1e-52
AT5G12100.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...   203   3e-52
AT2G06000.2 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   201   1e-51
AT2G06000.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   201   1e-51
AT3G48810.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   201   2e-51
AT1G64583.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   201   2e-51
AT5G57250.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   200   3e-51
AT5G38730.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   199   4e-51
AT1G19290.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   197   2e-50
AT3G54980.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   197   2e-50
AT1G13630.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   197   2e-50
AT1G13630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   197   2e-50
AT1G03560.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   195   1e-49
AT5G14770.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   194   1e-49
AT1G79540.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   192   5e-49
AT1G06580.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   191   1e-48
AT1G13040.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   191   2e-48
AT1G22960.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   191   2e-48
AT1G63230.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   191   2e-48
AT5G08310.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   189   7e-48
AT1G79080.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   186   4e-47
AT5G04810.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...   185   1e-46
AT2G26790.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   182   5e-46
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr...   182   5e-46
AT5G02860.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   182   7e-46
AT2G17525.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   182   1e-45
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-...   181   1e-45
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-...   181   2e-45
AT5G16420.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   179   5e-45
AT1G08610.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   179   5e-45
AT5G28370.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   178   1e-44
AT5G28460.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   178   1e-44
AT3G61520.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   177   2e-44
AT5G24830.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   175   9e-44
AT3G49730.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   174   2e-43
AT4G26800.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   173   3e-43
AT5G42310.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   172   6e-43
AT5G46680.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   172   1e-42
AT1G13800.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   171   1e-42
AT4G26680.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   167   2e-41
AT4G26680.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   167   2e-41
AT5G46100.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   166   5e-41
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720...   165   8e-41
AT1G77340.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   164   2e-40
AT5G21222.1 | Symbols:  | protein kinase family protein | chr5:7...   163   4e-40
AT5G62370.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   163   4e-40
AT3G18020.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   163   5e-40
AT2G18940.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   162   8e-40
AT3G16010.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   160   3e-39
AT1G02060.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   160   4e-39
AT5G65820.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   159   9e-39
AT1G52640.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   157   3e-38
AT1G20300.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   156   5e-38
AT5G18475.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   156   5e-38
AT1G11710.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   155   1e-37
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ...   149   5e-36
AT5G11310.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   146   4e-35
AT1G74750.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   146   4e-35
AT2G35130.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   145   8e-35
AT1G18900.2 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   145   9e-35
AT1G18900.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   145   9e-35
AT1G18900.3 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   145   9e-35
AT2G35130.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   145   9e-35
AT1G77360.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   145   9e-35
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ...   145   1e-34
AT1G63630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   145   1e-34
AT5G40400.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   145   1e-34
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931...   144   2e-34
AT1G07740.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   144   2e-34
AT5G39980.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   144   2e-34
AT2G36240.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...   143   5e-34
AT5G18950.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   141   2e-33
AT4G20740.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   141   2e-33
AT2G17670.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   140   3e-33
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su...   138   1e-32
AT1G73710.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   137   2e-32
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ...   137   3e-32
AT1G16830.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   137   4e-32
AT4G01400.3 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   135   1e-31
AT1G73400.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   135   1e-31
AT5G25630.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   134   2e-31
AT2G37230.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   134   2e-31
AT3G60050.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   132   9e-31
AT1G71060.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   130   2e-30
AT3G23020.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   130   3e-30
AT3G62470.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   130   4e-30
AT3G62540.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   129   6e-30
AT5G14820.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   129   8e-30
AT5G25630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   129   1e-29
AT1G53330.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   128   1e-29
AT3G59040.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   128   1e-29
AT1G71210.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   128   2e-29
AT3G59040.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   127   2e-29
AT5G18390.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   127   3e-29
AT2G35030.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   125   1e-28
AT1G05600.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   125   1e-28
AT1G05600.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   125   1e-28
AT3G22670.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   124   2e-28
AT1G19720.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   124   2e-28
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup...   123   4e-28
AT3G04130.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   122   9e-28
AT3G04130.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   122   9e-28
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con...   121   1e-27
AT1G55630.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   120   3e-27
AT1G56690.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   120   3e-27
AT5G15280.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   120   4e-27
AT4G01030.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...   119   7e-27
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c...   118   1e-26
AT5G48730.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   118   2e-26
AT1G53600.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   117   4e-26
AT1G66345.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   116   5e-26
AT1G10910.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   116   5e-26
AT5G06400.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   116   6e-26
AT4G01570.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   116   7e-26
AT3G02650.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   115   8e-26
AT5G43820.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   115   9e-26
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (...   115   1e-25
AT2G40720.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   114   2e-25
AT4G16835.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   114   2e-25
AT5G14080.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   114   2e-25
AT2G38420.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   114   3e-25
AT2G17670.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   114   3e-25
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ...   114   3e-25
AT5G15010.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   113   6e-25
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-...   112   7e-25
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l...   112   9e-25
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea...   112   1e-24
AT3G13150.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   112   1e-24
AT4G39952.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   112   1e-24
AT2G34400.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   112   1e-24
AT1G63320.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   111   2e-24
AT1G14470.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   110   3e-24
AT5G47360.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   110   5e-24
AT3G61170.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   110   5e-24
AT4G01400.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   109   5e-24
AT1G77405.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   108   1e-23
AT3G53170.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   108   1e-23
AT3G29230.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   108   2e-23
AT4G21300.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   108   2e-23
AT1G80550.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   107   2e-23
AT3G46610.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...   107   2e-23
AT1G68930.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...   107   3e-23
AT3G14580.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   106   4e-23
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c...   106   5e-23
AT3G09040.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   106   6e-23
AT3G13160.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   106   6e-23
AT2G28050.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   106   7e-23
AT3G15200.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   105   1e-22
AT3G13880.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   105   1e-22
AT2G27610.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   105   1e-22
AT2G03380.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   104   2e-22
AT1G32415.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...   104   3e-22
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li...   104   3e-22
AT2G33680.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   103   4e-22
AT4G02750.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   103   5e-22
AT5G60960.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   103   5e-22
AT1G55890.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   102   7e-22
AT1G63630.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   102   7e-22
AT1G04840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   102   1e-21
AT3G47840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   102   1e-21
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-...   100   3e-21
AT4G30825.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   100   4e-21
AT3G03580.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   100   4e-21
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su...   100   5e-21
AT3G14730.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...   100   6e-21
AT2G13600.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    99   8e-21
AT3G04750.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    99   8e-21
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su...    99   8e-21
AT2G15980.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    99   1e-20
AT1G25360.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    98   2e-20
AT2G21090.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    98   2e-20
AT5G02830.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    98   2e-20
AT3G02010.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    98   2e-20
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li...    97   3e-20
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re...    97   3e-20
AT1G09190.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    97   3e-20
AT1G56570.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    97   5e-20
AT3G08820.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    97   5e-20
AT3G61360.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    97   5e-20
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su...    96   6e-20
AT5G59600.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    96   6e-20
AT3G16610.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...    96   7e-20
AT1G69350.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    96   8e-20
AT5G06540.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    96   8e-20
AT5G46580.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...    96   9e-20
AT3G17370.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    96   9e-20
AT4G20770.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    96   1e-19
AT1G80150.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    96   1e-19
AT2G36980.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    96   1e-19
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ...    96   1e-19
AT4G13650.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    95   2e-19
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor  22 ...    95   2e-19
AT3G24000.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    95   2e-19
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con...    94   3e-19
AT4G19191.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    94   3e-19
AT5G39350.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    94   4e-19
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-...    94   5e-19
AT1G26500.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    93   5e-19
AT5G27110.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    93   6e-19
AT1G03540.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    93   7e-19
AT3G22690.2 | Symbols:  | INVOLVED IN: photosystem II assembly, ...    93   8e-19
AT3G23330.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    92   9e-19
AT5G13770.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    92   1e-18
AT3G22690.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Protein of...    92   1e-18
AT2G18520.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    92   2e-18
AT5G52850.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    92   2e-18
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su...    92   2e-18
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor  18 ...    92   2e-18
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup...    91   2e-18
AT1G11630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    91   2e-18
AT4G22760.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    91   3e-18
AT3G25210.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    91   3e-18
AT1G02420.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    91   4e-18
AT3G22150.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    90   4e-18
AT1G80880.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    90   6e-18
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-...    90   7e-18
AT4G21065.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    89   8e-18
AT5G08305.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    89   9e-18
AT4G35130.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    89   1e-17
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ...    88   2e-17
AT3G49710.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    88   2e-17
AT5G47460.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    88   2e-17
AT5G65570.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    88   2e-17
AT5G13230.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    88   2e-17
AT2G02750.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    87   3e-17
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ...    87   3e-17
AT5G61370.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    87   3e-17
AT3G25970.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    87   4e-17
AT4G37170.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    87   4e-17
AT4G14820.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    87   5e-17
AT1G74630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    87   5e-17
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor  20 ...    87   5e-17
AT4G04370.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    87   6e-17
AT1G71490.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    86   6e-17
AT1G28690.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    86   7e-17
AT1G64310.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    86   7e-17
AT4G36680.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    86   8e-17
AT1G74600.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...    86   9e-17
AT1G09410.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...    86   9e-17
AT3G20730.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    86   9e-17
AT4G08210.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    86   1e-16
AT1G16480.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    86   1e-16
AT5G04780.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    86   1e-16
AT3G15930.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    86   1e-16
AT3G50420.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    86   1e-16
AT1G16480.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    86   1e-16
AT3G25060.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    85   2e-16
AT4G37380.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    85   2e-16
AT4G38150.2 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    85   2e-16
AT4G38150.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    85   2e-16
AT4G25270.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    85   2e-16
AT5G37570.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    85   2e-16
AT4G30700.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    85   2e-16
AT1G22830.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    85   2e-16
AT1G22830.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    85   2e-16
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110...    84   3e-16
AT4G39530.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    84   3e-16
AT1G34160.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    84   3e-16
AT5G16860.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    84   4e-16
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ...    83   6e-16
AT2G27800.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    83   6e-16
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup...    83   7e-16
AT2G37310.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    83   7e-16
AT1G68980.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    82   9e-16
AT3G18840.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    82   1e-15
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su...    82   1e-15
AT4G18840.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    82   2e-15
AT3G56030.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    82   2e-15
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D...    81   2e-15
AT1G06140.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    81   2e-15
AT2G40240.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    80   4e-15
AT2G22070.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...    80   4e-15
AT5G40405.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    80   5e-15
AT3G21470.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    80   5e-15
AT1G20230.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    80   5e-15
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li...    80   6e-15
AT3G02330.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    80   6e-15
AT1G10330.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    80   6e-15
AT2G01390.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    80   7e-15
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:...    80   7e-15
AT4G18520.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    80   7e-15
AT2G39620.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    79   9e-15
AT5G56310.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    79   9e-15
AT3G15130.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    79   1e-14
AT5G66520.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    79   1e-14
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti...    79   1e-14
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor  19 ...    79   2e-14
AT2G04860.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    78   2e-14
AT4G38010.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    78   2e-14
AT1G77170.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    78   2e-14
AT4G31070.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    78   2e-14
AT1G31430.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    78   3e-14
AT5G03560.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    78   3e-14
AT3G53360.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    78   3e-14
AT3G11460.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    77   3e-14
AT1G09220.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    77   3e-14
AT5G15340.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    77   3e-14
AT3G48250.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    77   4e-14
AT5G08510.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    77   4e-14
AT1G50270.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    77   4e-14
AT5G15300.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    77   6e-14
AT3G60040.1 | Symbols:  | F-box family protein | chr3:22175937-2...    76   7e-14
AT2G37320.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    76   7e-14
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-...    76   7e-14
AT4G16470.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    76   7e-14
AT5G61800.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    75   1e-13
AT3G28660.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    75   2e-13
AT5G46460.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    75   2e-13
AT3G26782.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    75   2e-13
AT5G44230.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    74   2e-13
AT4G14050.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    74   3e-13
AT1G17630.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    74   3e-13
AT2G42920.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    74   3e-13
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li...    74   4e-13
AT3G26540.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    74   4e-13
AT3G28640.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    74   5e-13
AT5G50390.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    74   5e-13
AT4G21065.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    73   5e-13
AT5G10690.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...    73   7e-13
AT3G62890.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    72   1e-12
AT5G42450.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    72   1e-12
AT4G32430.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    72   2e-12
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li...    71   2e-12
AT1G69290.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    71   2e-12
AT5G40410.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    71   3e-12
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor  21 ...    71   3e-12
AT1G77010.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    70   3e-12
AT2G33760.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    70   4e-12
AT4G02820.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    70   4e-12
AT1G33350.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    70   6e-12
AT3G49142.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    70   6e-12
AT3G05340.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    70   6e-12
AT4G04790.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    70   7e-12
AT3G58590.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    70   7e-12
AT1G18485.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    70   7e-12
AT1G60770.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    69   8e-12
AT5G27460.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    69   9e-12
AT1G11900.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    69   9e-12
AT3G13770.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    69   1e-11
AT2G44880.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    69   1e-11
AT1G71460.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    69   2e-11
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li...    68   2e-11
AT1G03100.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    68   2e-11
AT4G33170.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    68   2e-11
AT3G01580.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    68   2e-11
AT5G27300.2 | Symbols:  | pentatricopeptide (PPR) repeat-contain...    68   3e-11
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik...    68   3e-11
AT5G27300.1 | Symbols:  | pentatricopeptide (PPR) repeat-contain...    67   3e-11
AT4G14170.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    67   3e-11
AT1G76280.3 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    67   3e-11
AT1G26460.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    67   4e-11
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P...    67   5e-11
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ...    66   9e-11
AT3G49740.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    66   1e-10
AT5G08490.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    66   1e-10
AT5G09950.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    65   1e-10
AT1G31920.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    65   1e-10
AT4G15720.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    65   2e-10
AT5G50990.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    65   2e-10
AT1G43980.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    65   2e-10
AT1G13410.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    65   2e-10
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li...    65   2e-10
AT5G36300.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    64   4e-10
AT2G17210.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    64   5e-10
AT2G36730.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    64   5e-10
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ...    63   6e-10
AT1G76280.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    63   6e-10
AT3G56550.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    63   6e-10
AT5G43790.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    63   7e-10
AT3G14330.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    62   1e-09
AT1G01970.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    62   1e-09
AT1G26900.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    62   1e-09
AT1G23450.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    62   2e-09
AT1G03510.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    61   2e-09
AT4G21880.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    61   3e-09
AT1G02150.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    61   3e-09
AT3G02490.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    61   3e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ...    60   7e-09
AT2G46050.1 | Symbols:  | Pentatricopeptide repeat (PPR-like) su...    60   8e-09
AT1G06270.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    59   8e-09
AT4G14190.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    59   9e-09
AT4G21170.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    59   9e-09
AT1G76280.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    59   1e-08
AT5G14350.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    59   1e-08
AT5G28380.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    59   1e-08
AT5G28340.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    59   1e-08
AT2G01510.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    58   3e-08
AT2G20710.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    57   3e-08
AT1G07590.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    57   4e-08
AT3G51320.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    57   5e-08
AT3G46870.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    57   5e-08
AT2G30780.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    57   5e-08
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c...    57   5e-08
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c...    57   5e-08
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c...    57   5e-08
AT2G20710.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    56   1e-07
AT5G15980.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    54   3e-07
AT1G74400.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    54   3e-07
AT2G48000.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    54   3e-07
AT3G60980.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    54   3e-07
AT5G66631.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    54   5e-07
AT2G41080.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    53   9e-07
AT4G19220.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    53   1e-06
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l...    52   1e-06
AT3G26630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    52   2e-06
AT3G47530.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfa...    50   6e-06

>AT4G19890.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr4:10786948-10789053 REVERSE
           LENGTH=701
          Length = 701

 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/644 (64%), Positives = 510/644 (79%)

Query: 53  MVDRVCALVCDSFHQHTHMRVSPPRLHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFF 112
           +V  VC+LVC S+ +  H+  SP R++L  D +SLTHEQA+T VASLA  +GSMVAL FF
Sbjct: 55  LVKSVCSLVCTSYLRQNHVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFF 114

Query: 113 HWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMH 172
           +WA+G+ +FRHFMRLY+V A SL+ NGNLQKAHEVM+CM+R+F+EIGRL EAV MV +M 
Sbjct: 115 YWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQ 174

Query: 173 NQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVL 232
           NQG+ P++ T+N V++IA E+GL++YA+ +F+EMS RGV PDS+SY++MV+   + G + 
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234

Query: 233 EADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMI 292
           EAD+WL+ M+ RGF+ DNA+ TLI++  CE G   RA+ YF K  D+G KPNLINFTS+I
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294

Query: 293 EGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN 352
           +GLCK+GSIKQAFEMLEEMV  GWKPNVYTHTALIDGLCK+GWTEKAFRLFLKLVRS+  
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY 354

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           KPNV TYT+MI GYC++DKLNRAEML  RMKEQGL PN NTYTTLI+GHCKAG+F RA++
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           LMNLM  EGF PNI TYNA +D LCKK R  EAY++L   F  GLEAD VTY ILI E C
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           KQ DI QALA F +M K+G + D+     LIA FCR+K+M ESE  F+  V  G IPTK 
Sbjct: 475 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 534

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           TYTSMI  YC+EG++ +A+K+FH M  HGCVPDS  YG+LISGLCK+S +DEA  LY++M
Sbjct: 535 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594

Query: 593 IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMA 652
           I++GL P EVTR+TLAYEYCK +D  +AM++L+ L+KKLWIRT  TLVRKLCSE+KVG+A
Sbjct: 595 IDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVA 654

Query: 653 ALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSARIYK 696
           ALFF KLL+ D   +RVTLAAF TAC ES K  LV+DL+ RI +
Sbjct: 655 ALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISR 698


>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
           (TPR)-like superfamily protein | chr5:15895729-15897972
           FORWARD LENGTH=747
          Length = 747

 Score =  285 bits (728), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 154/515 (29%), Positives = 280/515 (54%), Gaps = 19/515 (3%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGL-VDYAQYLFEE 205
           V   +V+S++ +  + +A+ +V      G +P   + N V+         + +A+ +F+E
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           M    V P+  +Y +++  +C  GN+  A      M  +G L +  ++  +I  +C+   
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
                +     +  GL+PNLI++  +I GLC+ G +K+   +L EM  +G+  +  T+  
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LI G CK+G   +A  +  +++R     P+V+TYT++I+  C+   +NRA   L +M+ +
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           GL PN  TYTTL+DG  + G    A+ ++  M+  GFSP++ TYNA+++G C  G++++A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
             +L+D    GL  D V+Y+ ++S  C+  D+ +AL +  +M + GI+PD  +Y++LI  
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           FC ++R  E+   +EE +R G  P + TYT++I  YC EG+L  A++  + M + G +PD
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD 625
            + Y  LI+GL KQS+  EA+ L   +  +  +P +VT  TL      I++C +      
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL------IENCSN------ 602

Query: 626 RLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLL 660
                +  ++  +L++  C +  +  A   F  +L
Sbjct: 603 -----IEFKSVVSLIKGFCMKGMMTEADQVFESML 632



 Score =  268 bits (685), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 269/495 (54%), Gaps = 29/495 (5%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++R F   G +  A+ +  +M  +G +PN  T N ++   C++  +D    L   M+ +G
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P+  SY V++   C+ G + E    L+ M  RG+ +D  ++  +I  +C++G   +AL
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +    GL P++I +TS+I  +CK G++ +A E L++M  +G  PN  T+T L+DG 
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            +KG+  +A+R+ L+ +      P+V+TY A+ING+C   K+  A  +L  MKE+GL P+
Sbjct: 391 SQKGYMNEAYRV-LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             +Y+T++ G C++ + + A  +   M  +G  P+  TY++++ G C++ R +EA  + +
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    GL  D+ TY  LI+ +C + D+++AL L ++M + G+ PD+ +Y+ LI    ++ 
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569

Query: 511 RMSESE-----MFFEEAVRFGFIPTKRTY---------------TSMICGYCREGNLTMA 550
           R  E++     +F+EE+V     P+  TY                S+I G+C +G +T A
Sbjct: 570 RTREAKRLLLKLFYEESV-----PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA 624

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA-- 608
            + F  M      PD  AY  +I G C+   + +A  LY  M++ G +   VT I L   
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684

Query: 609 -YEYCKIDDCCSAMV 622
            ++  K+++  S +V
Sbjct: 685 LHKEGKVNELNSVIV 699



 Score =  196 bits (499), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 220/460 (47%), Gaps = 51/460 (11%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           GR+KE   ++ EM+ +G   +  T N ++K  C+ G    A  +  EM   G+ P   +Y
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             ++ + CK GN+  A ++L  M  RG   +  ++T ++  F +KG+   A R   + +D
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
            G  P+++ + ++I G C  G ++ A  +LE+M  +G  P+V +++ ++ G C+    ++
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A R+  ++V  +  KP+ +TY+++I G+C   +   A  L   M   GL P+  TYT LI
Sbjct: 469 ALRVKREMVE-KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN--- 455
           + +C  G+ E+A  L N M  +G  P++ TY+ +++GL K+ R +EA ++L   F+    
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587

Query: 456 -------------------------------GL--EADKV--------------TYNILI 468
                                          G+  EAD+V               YNI+I
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647

Query: 469 SEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFI 528
             HC+  DI++A  L+ +M KSG      +   L+    +E +++E        +R   +
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707

Query: 529 PTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
                   ++    REGN+ + +     M+  G +P+ I+
Sbjct: 708 SEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747



 Score =  172 bits (435), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 112 FHWAI--GYSRFRHFMRLYIVCATSLIGN----GNLQKAHEVMQCM-------------- 151
           FH A+       RH +   ++  TSLI +    GN+ +A E +  M              
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385

Query: 152 -VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
            V  F++ G + EA  ++ EM++ G  P+  T N ++   C  G ++ A  + E+M  +G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD  SY  ++  +C+  +V EA +    M+++G   D  +++ +I  FCE+     A 
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             + +   +GL P+   +T++I   C  G +++A ++  EMV +G  P+V T++ LI+GL
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYT--------------AMINGYCRDDKLNRAE 376
            K+  T +A RL LKL   E+   +V  +T              ++I G+C    +  A+
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625

Query: 377 MLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGL 436
            +   M  +   P+   Y  +I GHC+AG+  +A+ L   M + GF  +  T  A+V  L
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685

Query: 437 CKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
            K+G+V E   ++     +   ++     +L+  + ++ ++   L + ++MAK G  P+
Sbjct: 686 HKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score =  124 bits (310), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 4/291 (1%)

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR-VQEAYKML 449
           ++ +  ++  + +    ++A  +++L    GF P + +YNA++D   +  R +  A  + 
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
           K+   + +  +  TYNILI   C   +I  AL LF KM   G  P++ +Y TLI  +C+ 
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
           +++ +           G  P   +Y  +I G CREG +         M+  G   D + Y
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
            TLI G CK+    +A  ++  M+  GL P  +T  +L +  CK  +   AM  LD++  
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373

Query: 630 KLWI---RTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
           +      RT TTLV     +  +  A     ++ D  F  + VT  A +  
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424


>AT5G65560.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:26201012-26203759 REVERSE
           LENGTH=915
          Length = 915

 Score =  278 bits (710), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 181/586 (30%), Positives = 285/586 (48%), Gaps = 11/586 (1%)

Query: 73  VSPPRLHLSIDPDSLTHEQAVTTVASL-AGNAGSMVALSFFHWAIGYSRFRHFMRLYIVC 131
           +S P  H S    S+    + + V+SL + +     AL+F HW     R++H +  Y   
Sbjct: 70  LSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASL 129

Query: 132 ATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTL-----NLV 186
            T LI NG +    ++   M++S   +G     +++  +M+          L     N +
Sbjct: 130 LTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTL 189

Query: 187 MKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGF 246
           +      GLVD  + ++ EM    V P+  +Y  MV  YCK+GNV EA++++S +++ G 
Sbjct: 190 LNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGL 249

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
             D  ++T +I  +C++     A + F++    G + N + +T +I GLC    I +A +
Sbjct: 250 DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMD 309

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           +  +M      P V T+T LI  LC      +A  L +K +     KPN+ TYT +I+  
Sbjct: 310 LFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNL-VKEMEETGIKPNIHTYTVLIDSL 368

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
           C   K  +A  LLG+M E+GL+PN  TY  LI+G+CK G  E A D++ LM     SPN 
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK 486
            TYN ++ G C K  V +A  +L       +  D VTYN LI   C+  +   A  L S 
Sbjct: 429 RTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           M   G+ PD  +YT++I   C+ KR+ E+   F+   + G  P    YT++I GYC+ G 
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547

Query: 547 LTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRIT 606
           +  A     +M    C+P+S+ +  LI GLC   KL EA  L + M++ GL P   T   
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607

Query: 607 LAYEYCKIDDCCSAMVILDRL---EKKLWIRTATTLVRKLCSERKV 649
           L +   K  D   A     ++     K    T TT ++  C E ++
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653



 Score =  233 bits (594), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 236/468 (50%), Gaps = 21/468 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ S     + ++A E++ +M  +G++PN  T N ++   C+ G+++ A  + E M +R 
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P++ +Y  ++  YCK  NV +A   L+ ML+R  L D  ++  +I   C  G    A 
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           R     +D GL P+   +TSMI+ LCK   +++A ++ + +  +G  PNV  +TALIDG 
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK G  ++A  L L+ + S+N  PN LT+ A+I+G C D KL  A +L  +M + GL P 
Sbjct: 543 CKAGKVDEA-HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
            +T T LI    K G+F+ A+     M   G  P+  TY   +   C++GR+ +A  M+ 
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR-- 508
               NG+  D  TY+ LI  +        A  +  +M  +G +P  H++ +LI       
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721

Query: 509 --EKRMSESEM--------------FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIK 552
             +++ SE E+                E+ V     P  ++Y  +I G C  GNL +A K
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK 781

Query: 553 FF-HRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            F H   + G  P  + +  L+S  CK  K +EA  + D MI  G +P
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829



 Score =  231 bits (589), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 243/504 (48%), Gaps = 20/504 (3%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R+ EA+++  +M +    P  +T  +++K  C       A  L +EM   G+ P+  +Y 
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           V++ + C      +A + L  ML++G + +  ++  +I+ +C++G    A+         
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
            L PN   +  +I+G CK  ++ +A  +L +M+ +   P+V T+ +LIDG C+ G  + A
Sbjct: 423 KLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           +RL L L+      P+  TYT+MI+  C+  ++  A  L   ++++G+ PN   YT LID
Sbjct: 482 YRL-LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G+CKAG  + A  ++  M  +   PN  T+NA++ GLC  G+++EA  + +     GL+ 
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
              T  ILI    K  D   A + F +M  SG +PD H+YTT I  +CRE R+ ++E   
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI------ 573
            +    G  P   TY+S+I GY   G    A     RM D GC P    + +LI      
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720

Query: 574 ---------SGLCKQSKL---DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAM 621
                      LC  S +   D    L + M+E  + P   +   L    C++ +   A 
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780

Query: 622 VILDRLEKKLWIRTATTLVRKLCS 645
            + D +++   I  +  +   L S
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLS 804



 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 195/448 (43%), Gaps = 55/448 (12%)

Query: 269 ALRYFHKFS-DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV--CQGWKPNVYTHTA 325
           AL + H  S +   K ++ ++ S++  L   G +   F++   M+  C      +Y    
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALY---- 161

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
            +  LC+K   ++ F L  KL+        +  Y  ++N   R   ++  + +   M E 
Sbjct: 162 -VLDLCRKMNKDERFELKYKLI--------IGCYNTLLNSLARFGLVDEMKQVYMEMLED 212

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
            + PN  TY  +++G+CK GN E A   ++ +   G  P+  TY +++ G C++  +  A
Sbjct: 213 KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSA 272

Query: 446 YKMLKDGFHNGLEADKV-----------------------------------TYNILISE 470
           +K+  +    G   ++V                                   TY +LI  
Sbjct: 273 FKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKS 332

Query: 471 HCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPT 530
            C      +AL L  +M ++GI+P+IH+YT LI   C + +  ++     + +  G +P 
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392

Query: 531 KRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD 590
             TY ++I GYC+ G +  A+     M      P++  Y  LI G CK S + +A G+ +
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLN 451

Query: 591 SMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR---TATTLVRKLCSER 647
            M+E+ ++P  VT  +L    C+  +  SA  +L  +  +  +    T T+++  LC  +
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511

Query: 648 KVGMAALFFHKLLDMDFHVNRVTLAAFM 675
           +V  A   F  L     + N V   A +
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALI 539



 Score =  132 bits (333), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 197/443 (44%), Gaps = 19/443 (4%)

Query: 134 SLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM 193
           SL+ +  L         M+ S  +  R++EA ++   +  +G+ PN      ++   C+ 
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF 253
           G VD A  + E+M ++   P+S ++  ++   C  G + EA      M+  G     ++ 
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
           T++I    + G    A   F +    G KP+   +T+ I+  C+ G +  A +M+ +M  
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
            G  P+++T+++LI G    G T  AF + LK +R    +P+  T+ ++I         +
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDV-LKRMRDTGCEPSQHTFLSLIK--------H 716

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
             EM  G  K++G  P     + +++       F+   +L+  M     +PN  +Y  ++
Sbjct: 717 LLEMKYG--KQKGSEPELCAMSNMME-------FDTVVELLEKMVEHSVTPNAKSYEKLI 767

Query: 434 DGLCKKGRVQEAYKMLKDGFHN-GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
            G+C+ G ++ A K+      N G+   ++ +N L+S  CK     +A  +   M   G 
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827

Query: 493 QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIK 552
            P + S   LI    ++         F+  ++ G+   +  +  +I G  ++G +    +
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887

Query: 553 FFHRMSDHGCVPDSIAYGTLISG 575
            F+ M  +GC   S  Y  LI G
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEG 910


>AT4G11690.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr4:7056254-7057954 FORWARD
           LENGTH=566
          Length = 566

 Score =  264 bits (675), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/453 (32%), Positives = 242/453 (53%), Gaps = 6/453 (1%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQY--LFEEM 206
           + ++ S+ +   L  ++    EM + G VP +   N ++     +G   + Q+   F E 
Sbjct: 98  EVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFV--VGSSSFNQWWSFFNEN 155

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
            ++ V  D  S+ +++   C+ G + ++   L  + + GF  +   +T +I   C+KG  
Sbjct: 156 KSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
            +A   F +   +GL  N   +T +I GL K G  KQ FEM E+M   G  PN+YT+  +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           ++ LCK G T+ AF++F ++ R      N++TY  +I G CR+ KLN A  ++ +MK  G
Sbjct: 275 MNQLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           + PN  TY TLIDG C  G   +A  L   +   G SP++ TYN +V G C+KG    A 
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
           KM+K+    G++  KVTY ILI    +  ++++A+ L   M + G+ PD+H+Y+ LI  F
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453

Query: 507 CREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS 566
           C + +M+E+   F+  V     P +  Y +MI GYC+EG+   A+K    M +    P+ 
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513

Query: 567 IAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            +Y  +I  LCK+ K  EA  L + MI+ G+ P
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546



 Score =  227 bits (578), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 234/452 (51%), Gaps = 15/452 (3%)

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS 277
           Y V++ +Y +  ++  +  + + M+D GF+  +  F  +++         +   +F++ +
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155

Query: 278 DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTE 337
              +  ++ +F  +I+G C+ G I+++F++L E+   G+ PNV  +T LIDG CKKG  E
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 338 KAFRLF-----LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
           KA  LF     L LV +E       TYT +ING  ++    +   +  +M+E G+ PN  
Sbjct: 216 KAKDLFFEMGKLGLVANER------TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG 452
           TY  +++  CK G  + AF + + M   G S NI TYN ++ GLC++ ++ EA K++   
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
             +G+  + +TYN LI   C    + +AL+L   +   G+ P + +Y  L++ FCR+   
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
           S +    +E    G  P+K TYT +I  + R  N+  AI+    M + G VPD   Y  L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW 632
           I G C + +++EA  L+ SM+EK   P EV   T+   YCK      A+ +L  +E+K  
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509

Query: 633 IRTATT---LVRKLCSERKVGMAALFFHKLLD 661
                +   ++  LC ERK   A     K++D
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMID 541



 Score =  201 bits (510), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 201/380 (52%), Gaps = 1/380 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +++   E G ++++ +++ E+   G  PN      ++   C+ G ++ A+ LF EM   G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +  +  +Y V++    K G   +  +    M + G   +  ++  ++++ C+ G    A 
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + F +  + G+  N++ + ++I GLC+   + +A +++++M   G  PN+ T+  LIDG 
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C  G   KA  L   L +S    P+++TY  +++G+CR    + A  ++  M+E+G+ P+
Sbjct: 349 CGVGKLGKALSLCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TYT LID   ++ N E+A  L   M   G  P++ TY+ ++ G C KG++ EA ++ K
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                  E ++V YN +I  +CK+    +AL L  +M +  + P++ SY  +I V C+E+
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527

Query: 511 RMSESEMFFEEAVRFGFIPT 530
           +  E+E   E+ +  G  P+
Sbjct: 528 KSKEAERLVEKMIDSGIDPS 547


>AT1G05670.2 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr1:1698574-1700799 REVERSE
           LENGTH=741
          Length = 741

 Score =  261 bits (668), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 238/441 (53%), Gaps = 1/441 (0%)

Query: 157 EIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSA 216
           ++GR+KEA  ++  M  +G  P+  + + V+   C  G +D    L E M  +G+ P+S 
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317

Query: 217 SYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKF 276
            Y  ++   C++  + EA++  S M+ +G L D   +T +I  FC++G    A ++F++ 
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377

Query: 277 SDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWT 336
               + P+++ +T++I G C+ G + +A ++  EM C+G +P+  T T LI+G CK G  
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT 396
           + AFR+   ++++    PNV+TYT +I+G C++  L+ A  LL  M + GL PN  TY +
Sbjct: 438 KDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
           +++G CK+GN E A  L+      G + +  TY  ++D  CK G + +A ++LK+    G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556

Query: 457 LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE 516
           L+   VT+N+L++  C    ++    L + M   GI P+  ++ +L+  +C    +  + 
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616

Query: 517 MFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
             +++    G  P  +TY +++ G+C+  N+  A   F  M   G       Y  LI G 
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676

Query: 577 CKQSKLDEARGLYDSMIEKGL 597
            K+ K  EAR ++D M  +GL
Sbjct: 677 LKRKKFLEAREVFDQMRREGL 697



 Score =  260 bits (664), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/467 (31%), Positives = 236/467 (50%), Gaps = 1/467 (0%)

Query: 164 AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
           A+ +  E    G+  N  + N+V+   C++G +  A +L   M  +G  PD  SY  +V 
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP 283
            YC+ G + +  K + VM  +G   ++  +  II   C       A   F +    G+ P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF 343
           + + +T++I+G CKRG I+ A +   EM  +   P+V T+TA+I G C+ G   +A +LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK 403
            ++   +  +P+ +T+T +INGYC+   +  A  +   M + G  PN  TYTTLIDG CK
Sbjct: 410 HEMF-CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468

Query: 404 AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
            G+ + A +L++ M + G  PNI TYN+IV+GLCK G ++EA K++ +    GL AD VT
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
           Y  L+  +CK  ++ +A  +  +M   G+QP I ++  L+  FC    + + E      +
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588

Query: 524 RFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
             G  P   T+ S++  YC   NL  A   +  M   G  PD   Y  L+ G CK   + 
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648

Query: 584 EARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           EA  L+  M  KG      T   L   + K      A  + D++ ++
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695



 Score =  254 bits (650), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 232/448 (51%), Gaps = 1/448 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V  +   G L +  +++  M  +G+ PN+     ++ + C +  +  A+  F EM  +G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD+  Y  ++  +CK G++  A K+   M  R    D  ++T IIS FC+ G    A 
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + FH+    GL+P+ + FT +I G CK G +K AF +   M+  G  PNV T+T LIDGL
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK+G  + A  L  ++ +    +PN+ TY +++NG C+   +  A  L+G  +  GL  +
Sbjct: 467 CKEGDLDSANELLHEMWKI-GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
           T TYTTL+D +CK+G  ++A +++  M  +G  P I T+N +++G C  G +++  K+L 
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                G+  +  T+N L+ ++C + ++K A A++  M   G+ PD  +Y  L+   C+ +
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
            M E+   F+E    GF  +  TY+ +I G+ +      A + F +M   G   D   + 
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLI 598
                  K  + D      D +IE  L+
Sbjct: 706 FFSDTKYKGKRPDTIVDPIDEIIENYLV 733



 Score =  254 bits (649), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/547 (27%), Positives = 277/547 (50%), Gaps = 5/547 (0%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVM-KIACEMGLVDYAQYLFEE 205
           V     +   + G L+EA  +  +M N G+V +  + N+ + +++ +      A  +F E
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
               GV  + ASY +++   C++G + EA   L +M  +G+  D  S++ +++ +C  G 
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
             +  +        GLKPN   + S+I  LC+   + +A E   EM+ QG  P+   +T 
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LIDG CK+G    A + F ++  S +  P+VLTYTA+I+G+C+   +  A  L   M  +
Sbjct: 357 LIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           GL P++ T+T LI+G+CKAG+ + AF + N M + G SPN+ TY  ++DGLCK+G +  A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            ++L + +  GL+ +  TYN +++  CK  +I++A+ L  +   +G+  D  +YTTL+  
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           +C+   M +++   +E +  G  PT  T+  ++ G+C  G L    K  + M   G  P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD 625
           +  + +L+   C ++ L  A  +Y  M  +G+ P   T   L   +CK  +   A  +  
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655

Query: 626 RLEKK---LWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESN 682
            ++ K   + + T + L++     +K   A   F ++       ++     F    Y+  
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715

Query: 683 KYALVSD 689
           +   + D
Sbjct: 716 RPDTIVD 722



 Score =  223 bits (568), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 250/513 (48%), Gaps = 50/513 (9%)

Query: 107 VALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVE 166
           + L FF WA    R R    L  +C   +I      K  +V Q ++ SF E  +L     
Sbjct: 103 LVLDFFDWA----RSRRDSNLESLCI--VIHLAVASKDLKVAQSLISSFWERPKLNVTDS 156

Query: 167 -------MVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
                  +V+   + G  P  +  ++  ++  + GL+  A+ +FE+M   G+        
Sbjct: 157 FVQFFDLLVYTYKDWGSDP--RVFDVFFQVLVDFGLLREARRVFEKMLNYGL-------- 206

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           V+ V  C            +V L R            +S+ C K     A+  F +F ++
Sbjct: 207 VLSVDSC------------NVYLTR------------LSKDCYK--TATAIIVFREFPEV 240

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+  N+ ++  +I  +C+ G IK+A  +L  M  +G+ P+V +++ +++G C+ G  +K 
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           ++L +++++ +  KPN   Y ++I   CR  KL  AE     M  QG++P+T  YTTLID
Sbjct: 301 WKL-IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G CK G+   A      M     +P++ TY AI+ G C+ G + EA K+  + F  GLE 
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D VT+  LI+ +CK   +K A  + + M ++G  P++ +YTTLI   C+E  +  +    
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            E  + G  P   TY S++ G C+ GN+  A+K        G   D++ Y TL+   CK 
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITLAYEYC 612
            ++D+A+ +   M+ KGL P  VT   L   +C
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572



 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 1/150 (0%)

Query: 135 LIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMG 194
           ++G G LQ        ++  F   G L++  +++  M  +G+ PN  T N ++K  C   
Sbjct: 552 MLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT 254
            +  A  ++++M +RGV PD  +Y  +V  +CK  N+ EA      M  +GF V  ++++
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670

Query: 255 LIISEFCEKGFATRALRYFHKFSDMGLKPN 284
           ++I  F ++     A   F +    GL  +
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAAD 700


>AT1G05670.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr1:1698574-1700799 REVERSE
           LENGTH=741
          Length = 741

 Score =  261 bits (668), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 238/441 (53%), Gaps = 1/441 (0%)

Query: 157 EIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSA 216
           ++GR+KEA  ++  M  +G  P+  + + V+   C  G +D    L E M  +G+ P+S 
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317

Query: 217 SYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKF 276
            Y  ++   C++  + EA++  S M+ +G L D   +T +I  FC++G    A ++F++ 
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377

Query: 277 SDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWT 336
               + P+++ +T++I G C+ G + +A ++  EM C+G +P+  T T LI+G CK G  
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT 396
           + AFR+   ++++    PNV+TYT +I+G C++  L+ A  LL  M + GL PN  TY +
Sbjct: 438 KDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
           +++G CK+GN E A  L+      G + +  TY  ++D  CK G + +A ++LK+    G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556

Query: 457 LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE 516
           L+   VT+N+L++  C    ++    L + M   GI P+  ++ +L+  +C    +  + 
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616

Query: 517 MFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
             +++    G  P  +TY +++ G+C+  N+  A   F  M   G       Y  LI G 
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676

Query: 577 CKQSKLDEARGLYDSMIEKGL 597
            K+ K  EAR ++D M  +GL
Sbjct: 677 LKRKKFLEAREVFDQMRREGL 697



 Score =  260 bits (664), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/467 (31%), Positives = 236/467 (50%), Gaps = 1/467 (0%)

Query: 164 AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
           A+ +  E    G+  N  + N+V+   C++G +  A +L   M  +G  PD  SY  +V 
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP 283
            YC+ G + +  K + VM  +G   ++  +  II   C       A   F +    G+ P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF 343
           + + +T++I+G CKRG I+ A +   EM  +   P+V T+TA+I G C+ G   +A +LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK 403
            ++   +  +P+ +T+T +INGYC+   +  A  +   M + G  PN  TYTTLIDG CK
Sbjct: 410 HEMF-CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468

Query: 404 AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
            G+ + A +L++ M + G  PNI TYN+IV+GLCK G ++EA K++ +    GL AD VT
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
           Y  L+  +CK  ++ +A  +  +M   G+QP I ++  L+  FC    + + E      +
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588

Query: 524 RFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
             G  P   T+ S++  YC   NL  A   +  M   G  PD   Y  L+ G CK   + 
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648

Query: 584 EARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           EA  L+  M  KG      T   L   + K      A  + D++ ++
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695



 Score =  254 bits (650), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 232/448 (51%), Gaps = 1/448 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V  +   G L +  +++  M  +G+ PN+     ++ + C +  +  A+  F EM  +G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD+  Y  ++  +CK G++  A K+   M  R    D  ++T IIS FC+ G    A 
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + FH+    GL+P+ + FT +I G CK G +K AF +   M+  G  PNV T+T LIDGL
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK+G  + A  L  ++ +    +PN+ TY +++NG C+   +  A  L+G  +  GL  +
Sbjct: 467 CKEGDLDSANELLHEMWKI-GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
           T TYTTL+D +CK+G  ++A +++  M  +G  P I T+N +++G C  G +++  K+L 
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                G+  +  T+N L+ ++C + ++K A A++  M   G+ PD  +Y  L+   C+ +
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
            M E+   F+E    GF  +  TY+ +I G+ +      A + F +M   G   D   + 
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLI 598
                  K  + D      D +IE  L+
Sbjct: 706 FFSDTKYKGKRPDTIVDPIDEIIENYLV 733



 Score =  254 bits (649), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/547 (27%), Positives = 277/547 (50%), Gaps = 5/547 (0%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVM-KIACEMGLVDYAQYLFEE 205
           V     +   + G L+EA  +  +M N G+V +  + N+ + +++ +      A  +F E
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
               GV  + ASY +++   C++G + EA   L +M  +G+  D  S++ +++ +C  G 
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
             +  +        GLKPN   + S+I  LC+   + +A E   EM+ QG  P+   +T 
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LIDG CK+G    A + F ++  S +  P+VLTYTA+I+G+C+   +  A  L   M  +
Sbjct: 357 LIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           GL P++ T+T LI+G+CKAG+ + AF + N M + G SPN+ TY  ++DGLCK+G +  A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            ++L + +  GL+ +  TYN +++  CK  +I++A+ L  +   +G+  D  +YTTL+  
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           +C+   M +++   +E +  G  PT  T+  ++ G+C  G L    K  + M   G  P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD 625
           +  + +L+   C ++ L  A  +Y  M  +G+ P   T   L   +CK  +   A  +  
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655

Query: 626 RLEKK---LWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESN 682
            ++ K   + + T + L++     +K   A   F ++       ++     F    Y+  
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715

Query: 683 KYALVSD 689
           +   + D
Sbjct: 716 RPDTIVD 722



 Score =  223 bits (568), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 250/513 (48%), Gaps = 50/513 (9%)

Query: 107 VALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVE 166
           + L FF WA    R R    L  +C   +I      K  +V Q ++ SF E  +L     
Sbjct: 103 LVLDFFDWA----RSRRDSNLESLCI--VIHLAVASKDLKVAQSLISSFWERPKLNVTDS 156

Query: 167 -------MVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
                  +V+   + G  P  +  ++  ++  + GL+  A+ +FE+M   G+        
Sbjct: 157 FVQFFDLLVYTYKDWGSDP--RVFDVFFQVLVDFGLLREARRVFEKMLNYGL-------- 206

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           V+ V  C            +V L R            +S+ C K     A+  F +F ++
Sbjct: 207 VLSVDSC------------NVYLTR------------LSKDCYK--TATAIIVFREFPEV 240

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+  N+ ++  +I  +C+ G IK+A  +L  M  +G+ P+V +++ +++G C+ G  +K 
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           ++L +++++ +  KPN   Y ++I   CR  KL  AE     M  QG++P+T  YTTLID
Sbjct: 301 WKL-IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G CK G+   A      M     +P++ TY AI+ G C+ G + EA K+  + F  GLE 
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D VT+  LI+ +CK   +K A  + + M ++G  P++ +YTTLI   C+E  +  +    
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            E  + G  P   TY S++ G C+ GN+  A+K        G   D++ Y TL+   CK 
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITLAYEYC 612
            ++D+A+ +   M+ KGL P  VT   L   +C
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572



 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 1/150 (0%)

Query: 135 LIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMG 194
           ++G G LQ        ++  F   G L++  +++  M  +G+ PN  T N ++K  C   
Sbjct: 552 MLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT 254
            +  A  ++++M +RGV PD  +Y  +V  +CK  N+ EA      M  +GF V  ++++
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670

Query: 255 LIISEFCEKGFATRALRYFHKFSDMGLKPN 284
           ++I  F ++     A   F +    GL  +
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAAD 700


>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:19900303-19902567 FORWARD
           LENGTH=754
          Length = 754

 Score =  259 bits (661), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 234/424 (55%), Gaps = 2/424 (0%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           G+ P+  T N+++K  C    +  A  + E+M + G+ PD  ++  ++  Y + G++  A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM-GLKPNLINFTSMIE 293
            +    M++ G    N S  +I+  FC++G    AL +  + S+  G  P+   F +++ 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 294 GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
           GLCK G +K A E+++ M+ +G+ P+VYT+ ++I GLCK G  ++A  +  +++ + +  
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI-TRDCS 362

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           PN +TY  +I+  C+++++  A  L   +  +G++P+  T+ +LI G C   N   A +L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
              M  +G  P+  TYN ++D LC KG++ EA  MLK    +G     +TYN LI   CK
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
               ++A  +F +M   G+  +  +Y TLI   C+ +R+ ++    ++ +  G  P K T
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542

Query: 534 YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
           Y S++  +CR G++  A      M+ +GC PD + YGTLISGLCK  +++ A  L  S+ 
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602

Query: 594 EKGL 597
            KG+
Sbjct: 603 MKGI 606



 Score =  236 bits (603), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 234/486 (48%), Gaps = 37/486 (7%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++++     +L+ A+ M+ +M + G+VP+ +T   VM+   E G +D A  + E+M   G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDR-GFLVDNASFTLIISEFCEKGFATRA 269
               + S  V+V  +CK G V +A  ++  M ++ GF  D  +F  +++  C+ G    A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           +         G  P++  + S+I GLCK G +K+A E+L++M+ +   PN  T+  LI  
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374

Query: 330 LCKKGWTEKAFRL----------------------------------FLKLVRSENNKPN 355
           LCK+   E+A  L                                    + +RS+  +P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
             TY  +I+  C   KL+ A  +L +M+  G   +  TY TLIDG CKA     A ++ +
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494

Query: 416 LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQA 475
            M   G S N  TYN ++DGLCK  RV++A +++      G + DK TYN L++  C+  
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554

Query: 476 DIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYT 535
           DIK+A  +   M  +G +PDI +Y TLI+  C+  R+  +          G   T   Y 
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYN 614

Query: 536 SMICGYCREGNLTMAIKFFHRMSDHG-CVPDSIAYGTLISGLCK-QSKLDEARGLYDSMI 593
            +I G  R+   T AI  F  M +     PD+++Y  +  GLC     + EA      ++
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELL 674

Query: 594 EKGLIP 599
           EKG +P
Sbjct: 675 EKGFVP 680


>AT1G74580.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:28020777-28023068 FORWARD
           LENGTH=763
          Length = 763

 Score =  253 bits (645), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 153/573 (26%), Positives = 277/573 (48%), Gaps = 20/573 (3%)

Query: 106 MVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCM-------------- 151
           M AL  F+       F+H +  Y      L   G  +   EV+  M              
Sbjct: 21  MKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYV 80

Query: 152 --VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
             ++++   G+++EAV +   M      P   + N +M +  + G  D A  ++  M  R
Sbjct: 81  GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           G+ PD  S+ + + ++CK      A + L+ M  +G  ++  ++  ++  F E+ F    
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
              F K    G+   L  F  ++  LCK+G +K+  ++L++++ +G  PN++T+   I G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
           LC++G  + A R+   L+  +  KP+V+TY  +I G C++ K   AE+ LG+M  +GL P
Sbjct: 261 LCQRGELDGAVRMVGCLIE-QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           ++ TY TLI G+CK G  + A  ++      GF P+  TY +++DGLC +G    A  + 
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
            +    G++ + + YN LI     Q  I +A  L ++M++ G+ P++ ++  L+   C+ 
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
             +S+++   +  +  G+ P   T+  +I GY  +  +  A++    M D+G  PD   Y
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
            +L++GLCK SK ++    Y +M+EKG  P   T   L    C+      A+ +L+ ++ 
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559

Query: 630 KLWIRTAT---TLVRKLCSERKVGMAALFFHKL 659
           K     A    TL+   C    +  A   F K+
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592



 Score =  249 bits (635), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 252/485 (51%), Gaps = 10/485 (2%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           ++   + G L  AV MV  +  QG  P+  T N ++   C+      A+    +M   G+
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            PDS +Y  ++  YCK G V  A++ +   +  GF+ D  ++  +I   C +G   RAL 
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
            F++    G+KPN+I + ++I+GL  +G I +A ++  EM  +G  P V T   L++GLC
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
           K G    A  L +K++ S+   P++ T+  +I+GY    K+  A  +L  M + G+ P+ 
Sbjct: 438 KMGCVSDADGL-VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
            TY +L++G CK   FE   +    M  +G +PN+ T+N +++ LC+  ++ EA  +L++
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS-GIQPDIHSYTTLIAVFCREK 510
             +  +  D VT+  LI   CK  D+  A  LF KM ++  +     +Y  +I  F  + 
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
            ++ +E  F+E V     P   TY  M+ G+C+ GN+ +  KF   M ++G +P     G
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLG 676

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKID--DCCSAMVILDRLE 628
            +I+ LC + ++ EA G+   M++KGL+P  V  I      C +D  +  +  ++L+ L 
Sbjct: 677 RVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTI------CDVDKKEVAAPKLVLEDLL 730

Query: 629 KKLWI 633
           KK  I
Sbjct: 731 KKSCI 735



 Score =  221 bits (564), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 253/514 (49%), Gaps = 5/514 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V  F E     E  E+  +M   G+     T N ++++ C+ G V   + L +++  RG
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V P+  +Y + +   C+ G +  A + +  ++++G   D  ++  +I   C+      A 
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
            Y  K  + GL+P+   + ++I G CK G ++ A  ++ + V  G+ P+ +T+ +LIDGL
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C +G T +A  LF + +  +  KPNV+ Y  +I G      +  A  L   M E+GLIP 
Sbjct: 367 CHEGETNRALALFNEAL-GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             T+  L++G CK G    A  L+ +M  +G+ P+I T+N ++ G   + +++ A ++L 
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
               NG++ D  TYN L++  CK +  +  +  +  M + G  P++ ++  L+   CR +
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI-AY 569
           ++ E+    EE       P   T+ ++I G+C+ G+L  A   F +M +   V  S   Y
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
             +I    ++  +  A  L+  M+++ L P   T   +   +CK  +       L  + +
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665

Query: 630 KLWIRTATTLVRK---LCSERKVGMAALFFHKLL 660
             +I + TTL R    LC E +V  AA   H+++
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699



 Score =  158 bits (399), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +++  +  G + EA ++  EM  +G++P  QT N+++   C+MG V  A  L + M ++G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456

Query: 211 VHPDSASYRVMVVAYC---KMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
             PD  ++ +++  Y    KM N LE    L VMLD G   D  ++  +++  C+     
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALE---ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
             +  +    + G  PNL  F  ++E LC+   + +A  +LEEM  +   P+  T   LI
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           DG CK G  + A+ LF K+  +     +  TY  +I+ +     +  AE L   M ++ L
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            P+  TY  ++DG CK GN    +  +  M   GF P++ T   +++ LC + RV EA  
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693

Query: 448 MLKDGFHNGLEADKVT 463
           ++      GL  + V 
Sbjct: 694 IIHRMVQKGLVPEAVN 709



 Score = 95.9 bits (237), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 143/391 (36%), Gaps = 90/391 (23%)

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFE----------- 408
           TA+I   C+ D +   EM     KE G     +TY ++I+     G FE           
Sbjct: 11  TAVIK--CQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRE 68

Query: 409 ----------------------RAFDLMNLMSREGF---SPNICTYNAIVDGLCKKGRVQ 443
                                 +  + +N+  R  F    P + +YNAI+  L   G   
Sbjct: 69  NVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFD 128

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQAL---------------------- 481
           +A+K+       G+  D  ++ I +   CK +    AL                      
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVV 188

Query: 482 -------------ALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFI 528
                         LF KM  SG+   + ++  L+ V C++  + E E   ++ ++ G +
Sbjct: 189 GGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVL 248

Query: 529 PTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGL 588
           P   TY   I G C+ G L  A++    + + G  PD I Y  LI GLCK SK  EA   
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308

Query: 589 YDSMIEKGLIPCEVTRITLAYEYCK----------IDDCCSAMVILDRLEKKLWIRTATT 638
              M+ +GL P   T  TL   YCK          + D      + D+        T  +
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF-------TYRS 361

Query: 639 LVRKLCSERKVGMAALFFHKLLDMDFHVNRV 669
           L+  LC E +   A   F++ L      N +
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVI 392


>AT2G02150.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:550340-552625 REVERSE
           LENGTH=761
          Length = 761

 Score =  248 bits (634), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 240/448 (53%), Gaps = 2/448 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  FA++G+  +      +M   G  P   T N+++   C+ G V+ A+ LFEEM  RG
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD+ +Y  M+  + K+G + +   +   M D     D  ++  +I+ FC+ G     L
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
            ++ +    GLKPN+++++++++  CK G ++QA +   +M   G  PN YT+T+LID  
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK G    AFRL  ++++    + NV+TYTA+I+G C  +++  AE L G+M   G+IPN
Sbjct: 413 CKIGNLSDAFRLGNEMLQV-GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             +Y  LI G  KA N +RA +L+N +   G  P++  Y   + GLC   +++ A  ++ 
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    G++A+ + Y  L+  + K  +  + L L  +M +  I+  + ++  LI   C+ K
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591

Query: 511 RMSESEMFFEE-AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
            +S++  +F   +  FG       +T+MI G C++  +  A   F +M   G VPD  AY
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGL 597
            +L+ G  KQ  + EA  L D M E G+
Sbjct: 652 TSLMDGNFKQGNVLEALALRDKMAEIGM 679



 Score =  235 bits (599), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 161/629 (25%), Positives = 291/629 (46%), Gaps = 35/629 (5%)

Query: 107 VALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAE--------- 157
           +A  FF W++  + F+H +  Y + A  L        A+ V++ MV S A+         
Sbjct: 124 LAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWS 183

Query: 158 ---------------------IGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLV 196
                                +G L+EA++   +M    + P T++ N ++    ++G  
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243

Query: 197 DYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLI 256
           D  +  F++M   G  P   +Y +M+   CK G+V  A      M  RG + D  ++  +
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303

Query: 257 ISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW 316
           I  F + G     + +F +  DM  +P++I + ++I   CK G +    E   EM   G 
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363

Query: 317 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAE 376
           KPNV +++ L+D  CK+G  ++A + ++ + R     PN  TYT++I+  C+   L+ A 
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSLIDANCKIGNLSDAF 422

Query: 377 MLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGL 436
            L   M + G+  N  TYT LIDG C A   + A +L   M   G  PN+ +YNA++ G 
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482

Query: 437 CKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI 496
            K   +  A ++L +    G++ D + Y   I   C    I+ A  + ++M + GI+ + 
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542

Query: 497 HSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR 556
             YTTL+  + +    +E     +E        T  T+  +I G C+   ++ A+ +F+R
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602

Query: 557 MS-DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKID 615
           +S D G   ++  +  +I GLCK ++++ A  L++ M++KGL+P      +L     K  
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662

Query: 616 DCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLA 672
           +   A+ + D++ +   KL +   T+LV  L    ++  A  F  +++    H + V   
Sbjct: 663 NVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCI 722

Query: 673 AFMTACYESNKYALVSDLSARIYKDNRLT 701
           + +   YE        +L + + K   LT
Sbjct: 723 SVLKKHYELGCIDEAVELQSYLMKHQLLT 751


>AT1G09900.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr1:3218133-3219929 FORWARD
           LENGTH=598
          Length = 598

 Score =  246 bits (629), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 233/455 (51%), Gaps = 6/455 (1%)

Query: 146 EVMQC--MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLF 203
           +++ C  ++R F  +G+ ++A +++  +   G VP+  T N+++   C+ G ++ A  + 
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195

Query: 204 EEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEK 263
           + MS   V PD  +Y  ++ + C  G + +A + L  ML R    D  ++T++I   C  
Sbjct: 196 DRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
                A++   +  D G  P+++ +  ++ G+CK G + +A + L +M   G +PNV TH
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
             ++  +C  G    A +L   ++R +   P+V+T+  +IN  CR   L RA  +L +M 
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLR-KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
           + G  PN+ +Y  L+ G CK    +RA + +  M   G  P+I TYN ++  LCK G+V+
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
           +A ++L      G     +TYN +I    K     +A+ L  +M    ++PD  +Y++L+
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
               RE ++ E+  FF E  R G  P   T+ S++ G C+      AI F   M + GC 
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
           P+  +Y  LI GL  +    EA  L + +  KGL+
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  234 bits (597), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 228/463 (49%), Gaps = 8/463 (1%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           +R     G L+E  + +  M   G VP+      +++  C +G    A  + E +   G 
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            PD  +Y VM+  YCK G   E +  LSV+       D  ++  I+   C+ G   +A+ 
Sbjct: 169 VPDVITYNVMISGYCKAG---EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
              +       P++I +T +IE  C+   +  A ++L+EM  +G  P+V T+  L++G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
           K+G  ++A + FL  + S   +PNV+T+  ++   C   +   AE LL  M  +G  P+ 
Sbjct: 286 KEGRLDEAIK-FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
            T+  LI+  C+ G   RA D++  M + G  PN  +YN ++ G CK+ ++  A + L+ 
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
               G   D VTYN +++  CK   ++ A+ + ++++  G  P + +Y T+I    +  +
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
             ++    +E       P   TY+S++ G  REG +  AIKFFH     G  P+++ + +
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRIT----LAYE 610
           ++ GLCK  + D A      MI +G  P E +       LAYE
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567



 Score =  232 bits (591), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 213/449 (47%), Gaps = 36/449 (8%)

Query: 227 KMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLI 286
           + G + E  K+L  M+  G + D    T +I  FC  G   +A +        G  P++I
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 287 NFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 346
            +  MI G CK G I  A  +L+ M      P+V T+  ++  LC  G  ++A  +  ++
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 347 VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN 406
           ++  +  P+V+TYT +I   CRD  +  A  LL  M+++G  P+  TY  L++G CK G 
Sbjct: 231 LQ-RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
            + A   +N M   G  PN+ T+N I+  +C  GR  +A K+L D    G     VT+NI
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           LI+  C++  + +A+ +  KM + G QP+  SY  L+  FC+EK+M  +  + E  V  G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
             P   TY +M+   C++G +  A++  +++S  GC P  I Y T+I GL K  K  +A 
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469

Query: 587 GLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSE 646
            L D M  K L P  +                                T ++LV  L  E
Sbjct: 470 KLLDEMRAKDLKPDTI--------------------------------TYSSLVGGLSRE 497

Query: 647 RKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
            KV  A  FFH+   M    N VT  + M
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIM 526



 Score =  217 bits (553), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 222/418 (53%), Gaps = 4/418 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+  + + G +  A+ ++  M    + P+  T N +++  C+ G +  A  + + M  R 
Sbjct: 178 MISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
            +PD  +Y +++ A C+   V  A K L  M DRG   D  ++ ++++  C++G    A+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           ++ +     G +PN+I    ++  +C  G    A ++L +M+ +G+ P+V T   LI+ L
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C+KG   +A  +  K+ +    +PN L+Y  +++G+C++ K++RA   L RM  +G  P+
Sbjct: 355 CRKGLLGRAIDILEKMPQ-HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY T++   CK G  E A +++N +S +G SP + TYN ++DGL K G+  +A K+L 
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +     L+ D +TY+ L+    ++  + +A+  F +  + GI+P+  ++ +++   C+ +
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
           +   +  F    +  G  P + +YT +I G   EG    A++  + + + G +  S A
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591



 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 102/246 (41%), Gaps = 19/246 (7%)

Query: 440 GRVQEAYKMLKDGFHNG------------LEADKVTYNILISEHCKQADIKQALALFSKM 487
           GR Q+ ++ L  G+ N                + V  N  + +  +  ++++       M
Sbjct: 70  GRAQK-FETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENM 128

Query: 488 AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNL 547
              G  PDI   TTLI  FCR  +  ++    E     G +P   TY  MI GYC+ G +
Sbjct: 129 VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEI 188

Query: 548 TMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
             A+    RMS     PD + Y T++  LC   KL +A  + D M+++   P  +T   L
Sbjct: 189 NNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 245

Query: 608 AYEYCKIDDCCSAMVILDRLEKKLW---IRTATTLVRKLCSERKVGMAALFFHKLLDMDF 664
               C+      AM +LD +  +     + T   LV  +C E ++  A  F + +     
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305

Query: 665 HVNRVT 670
             N +T
Sbjct: 306 QPNVIT 311



 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 1/140 (0%)

Query: 543 REGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEV 602
           R G L    KF   M  HG VPD I   TLI G C+  K  +A  + + +   G +P  +
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 603 TRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDM 662
           T   +   YCK  +  +A+ +LDR+     + T  T++R LC   K+  A     ++L  
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233

Query: 663 DFHVNRVTLAAFMTA-CYES 681
           D + + +T    + A C +S
Sbjct: 234 DCYPDVITYTILIEATCRDS 253


>AT5G01110.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:42114-44303 REVERSE
           LENGTH=729
          Length = 729

 Score =  244 bits (623), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 257/518 (49%), Gaps = 38/518 (7%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   ++R++ +  +L+EA E    + ++G   +    N ++     +G V+ A  +++E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
           S  GV  +  +  +MV A CK G + +   +LS + ++G   D  ++  +IS +  KG  
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             A    +     G  P +  + ++I GLCK G  ++A E+  EM+  G  P+  T+ +L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           +   CKKG   +  ++F  + RS +  P+++ +++M++ + R   L++A M    +KE G
Sbjct: 347 LMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           LIP+   YT LI G+C+ G    A +L N M ++G + ++ TYN I+ GLCK+  + EA 
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
           K+  +     L  D  T  ILI  HCK  +++ A+ LF KM +  I+ D+ +Y TL+  F
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525

Query: 507 -----------------------------------CREKRMSESEMFFEEAVRFGFIPTK 531
                                              C +  ++E+   ++E +     PT 
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585

Query: 532 RTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
               SMI GYCR GN +    F  +M   G VPD I+Y TLI G  ++  + +A GL   
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645

Query: 592 MIEK--GLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
           M E+  GL+P   T  ++ + +C+ +    A V+L ++
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683



 Score =  244 bits (622), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 237/451 (52%), Gaps = 3/451 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ +++  G ++EA E++  M  +G  P   T N V+   C+ G  + A+ +F EM   G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PDS +YR +++  CK G+V+E +K  S M  R  + D   F+ ++S F   G   +AL
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
            YF+   + GL P+ + +T +I+G C++G I  A  +  EM+ QG   +V T+  ++ GL
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK+    +A +LF ++       P+  T T +I+G+C+   L  A  L  +MKE+ +  +
Sbjct: 456 CKRKMLGEADKLFNEMTERAL-FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY TL+DG  K G+ + A ++   M  +   P   +Y+ +V+ LC KG + EA+++  
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +     ++   +  N +I  +C+  +     +   KM   G  PD  SY TLI  F RE+
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634

Query: 511 RMSESEMFFE--EAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
            MS++    +  E  + G +P   TY S++ G+CR+  +  A     +M + G  PD   
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           Y  +I+G   Q  L EA  ++D M+++G  P
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725



 Score =  234 bits (597), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 240/485 (49%), Gaps = 3/485 (0%)

Query: 148 MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS 207
           +  MV +  + G++++    + ++  +G+ P+  T N ++      GL++ A  L   M 
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
            +G  P   +Y  ++   CK G    A +  + ML  G   D+ ++  ++ E C+KG   
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
              + F       + P+L+ F+SM+    + G++ +A      +   G  P+   +T LI
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
            G C+KG    A  L  ++++ +    +V+TY  +++G C+   L  A+ L   M E+ L
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQ-QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            P++ T T LIDGHCK GN + A +L   M  +    ++ TYN ++DG  K G +  A +
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           +  D     +    ++Y+IL++  C +  + +A  ++ +M    I+P +    ++I  +C
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH--GCVPD 565
           R    S+ E F E+ +  GF+P   +Y ++I G+ RE N++ A     +M +   G VPD
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD 625
              Y +++ G C+Q+++ EA  +   MIE+G+ P   T   +   +   D+   A  I D
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHD 716

Query: 626 RLEKK 630
            + ++
Sbjct: 717 EMLQR 721



 Score =  221 bits (562), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 189/343 (55%), Gaps = 1/343 (0%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           F  +I    +   +++A E    +  +G+  ++    ALI  L + GW E A+ ++ ++ 
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
           RS     NV T   M+N  C+D K+ +    L +++E+G+ P+  TY TLI  +   G  
Sbjct: 228 RS-GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           E AF+LMN M  +GFSP + TYN +++GLCK G+ + A ++  +   +GL  D  TY  L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           + E CK+ D+ +   +FS M    + PD+  +++++++F R   + ++ M+F      G 
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
           IP    YT +I GYCR+G +++A+   + M   GC  D + Y T++ GLCK+  L EA  
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466

Query: 588 LYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           L++ M E+ L P   T   L   +CK+ +  +AM +  ++++K
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509



 Score =  175 bits (444), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 199/454 (43%), Gaps = 39/454 (8%)

Query: 249 DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           +++ F L+I  + +      A   F      G   ++    ++I  L + G ++ A+ + 
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

Query: 309 EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR 368
           +E+   G   NVYT   +++ LCK G  EK    FL  V+ +   P+++TY  +I+ Y  
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKV-GTFLSQVQEKGVYPDIVTYNTLISAYSS 282

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
              +  A  L+  M  +G  P   TY T+I+G CK G +ERA ++   M R G SP+  T
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342

Query: 429 YNAIVDGLCKKGRVQEAYKMLKD------------------------------GFHN--- 455
           Y +++   CKKG V E  K+  D                               + N   
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402

Query: 456 --GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
             GL  D V Y ILI  +C++  I  A+ L ++M + G   D+ +Y T++   C+ K + 
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           E++  F E       P   T T +I G+C+ GNL  A++ F +M +     D + Y TL+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522

Query: 574 SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL---EKK 630
            G  K   +D A+ ++  M+ K ++P  ++   L    C       A  + D +     K
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582

Query: 631 LWIRTATTLVRKLCSERKVGMAALFFHKLLDMDF 664
             +    ++++  C          F  K++   F
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616



 Score =  150 bits (378), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 149/266 (56%), Gaps = 1/266 (0%)

Query: 161 LKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRV 220
           L EA ++  EM  + + P++ TL +++   C++G +  A  LF++M  + +  D  +Y  
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           ++  + K+G++  A +  + M+ +  L    S++++++  C KG    A R + +     
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF 340
           +KP ++   SMI+G C+ G+       LE+M+ +G+ P+  ++  LI G  ++    KAF
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640

Query: 341 RLFLKLVRSENN-KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            L  K+   +    P+V TY ++++G+CR +++  AE++L +M E+G+ P+ +TYT +I+
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPN 425
           G     N   AF + + M + GFSP+
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQ--GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
           ++  F     + +A  +V +M  +  G+VP+  T N ++   C    +  A+ +  +M  
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDN 250
           RGV+PD ++Y  M+  +    N+ EA +    ML RGF  D+
Sbjct: 686 RGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727


>AT5G61400.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:24681550-24683514 FORWARD
           LENGTH=654
          Length = 654

 Score =  240 bits (613), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 232/429 (54%), Gaps = 1/429 (0%)

Query: 171 MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGN 230
           M ++G+VP+     ++ +   + GL    + L +EM++ G+ P+   Y + ++  C+   
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249

Query: 231 VLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTS 290
           + EA+K   +M   G L +  +++ +I  +C+ G   +A   + +     L PN++ F +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309

Query: 291 MIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 350
           +++G CK   +  A  +   MV  G  PN+Y +  LI G CK G   +A  L L  + S 
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL-LSEMESL 368

Query: 351 NNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA 410
           N  P+V TYT +ING C +D++  A  L  +MK + + P++ TY +LI G+CK  N E+A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428

Query: 411 FDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISE 470
            DL + M+  G  PNI T++ ++DG C    ++ A  +  +    G+  D VTY  LI  
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488

Query: 471 HCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPT 530
           H K+A++K+AL L+S M ++GI P+ H++  L+  F +E R+S +  F++E  +      
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWN 548

Query: 531 KRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD 590
              +T +I G C+ G +  A +FF  M   G  PD  +Y +++ G  ++ ++ +   L  
Sbjct: 549 HVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQC 608

Query: 591 SMIEKGLIP 599
            MI+ G++P
Sbjct: 609 DMIKTGILP 617



 Score =  211 bits (536), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 219/453 (48%), Gaps = 4/453 (0%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   ++  F E+G  +EA+ +  EM      P+++    ++         D     ++ M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDYQLM 190

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
            +RG+ PD   Y V+     K G   + +K L  M   G   +   +T+ I + C     
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             A + F      G+ PNL  +++MI+G CK G+++QA+ + +E++     PNV     L
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           +DG CK      A  LF+ +V+   + PN+  Y  +I+G+C+   +  A  LL  M+   
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVD-PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           L P+  TYT LI+G C       A  L   M  E   P+  TYN+++ G CK+  +++A 
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
            +  +   +G+E + +T++ LI  +C   DIK A+ L+ +M   GI PD+ +YT LI   
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489

Query: 507 CREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS 566
            +E  M E+   + + +  G  P   T+  ++ G+ +EG L++AI F+   +      + 
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH 549

Query: 567 IAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           + +  LI GLC+   +  A   +  M   G+ P
Sbjct: 550 VGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582



 Score =  202 bits (513), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 178/355 (50%), Gaps = 4/355 (1%)

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           F+L+I EF E G    AL       +M   P+     S++ GL +R      +   + M+
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSR---EMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMI 191

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
            +G  P+V+ +  L     K+G   K  +L L  + S   KPNV  YT  I   CRD+K+
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEKL-LDEMTSLGIKPNVYIYTIYILDLCRDNKM 250

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
             AE +   MK+ G++PN  TY+ +IDG+CK GN  +A+ L   +      PN+  +  +
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
           VDG CK   +  A  +       G++ +   YN LI  HCK  ++ +A+ L S+M    +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370

Query: 493 QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIK 552
            PD+ +YT LI   C E +++E+   F++       P+  TY S+I GYC+E N+  A+ 
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430

Query: 553 FFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
               M+  G  P+ I + TLI G C    +  A GLY  M  KG++P  VT   L
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485



 Score =  186 bits (472), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 188/383 (49%), Gaps = 4/383 (1%)

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           GL P++  +  + +   K+G   +  ++L+EM   G KPNVY +T  I  LC+    E+A
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            ++F +L++     PN+ TY+AMI+GYC+   + +A  L   +    L+PN   + TL+D
Sbjct: 254 EKMF-ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G CKA     A  L   M + G  PN+  YN ++ G CK G + EA  +L +     L  
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D  TY ILI+  C +  + +A  LF KM    I P   +Y +LI  +C+E  M ++    
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            E    G  P   T++++I GYC   ++  A+  +  M+  G VPD + Y  LI    K+
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVIL--DRLEKKLWIRTA- 636
           + + EA  LY  M+E G+ P + T   L   + K      A+     +  ++  W     
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGF 552

Query: 637 TTLVRKLCSERKVGMAALFFHKL 659
           T L+  LC    +  A+ FF  +
Sbjct: 553 TCLIEGLCQNGYILRASRFFSDM 575



 Score =  180 bits (456), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 187/406 (46%), Gaps = 34/406 (8%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G   +  +++ EM + G+ PN     + +   C    ++ A+ +FE M   GV P+  +Y
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             M+  YCK GNV +A      +L    L +   F  ++  FC+      A   F     
Sbjct: 273 SAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
            G+ PNL  +  +I G CK G++ +A  +L EM      P+V+T+T LI+GLC +    +
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392

Query: 339 AFRLFLKL----------------------------------VRSENNKPNVLTYTAMIN 364
           A RLF K+                                  + +   +PN++T++ +I+
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452

Query: 365 GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP 424
           GYC    +  A  L   M  +G++P+  TYT LID H K  N + A  L + M   G  P
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512

Query: 425 NICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALF 484
           N  T+  +VDG  K+GR+  A    ++        + V +  LI   C+   I +A   F
Sbjct: 513 NDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFF 572

Query: 485 SKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPT 530
           S M   GI PDI SY +++    +EKR++++ M   + ++ G +P 
Sbjct: 573 SDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618



 Score =  160 bits (404), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 185/391 (47%), Gaps = 8/391 (2%)

Query: 141 LQKAHEVM------QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMG 194
           L K H V+        M+  + + G +++A  +  E+    ++PN      ++   C+  
Sbjct: 259 LMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR 318

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT 254
            +  A+ LF  M   GV P+   Y  ++  +CK GN+LEA   LS M       D  ++T
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYT 378

Query: 255 LIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ 314
           ++I+  C +     A R F K  +  + P+   + S+I G CK  +++QA ++  EM   
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438

Query: 315 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR 374
           G +PN+ T + LIDG C     + A  L+ ++   +   P+V+TYTA+I+ + ++  +  
Sbjct: 439 GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT-IKGIVPDVVTYTALIDAHFKEANMKE 497

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVD 434
           A  L   M E G+ PN +T+  L+DG  K G    A D     +++    N   +  +++
Sbjct: 498 ALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIE 557

Query: 435 GLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP 494
           GLC+ G +  A +   D    G+  D  +Y  ++  H ++  I   + L   M K+GI P
Sbjct: 558 GLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILP 617

Query: 495 DIHSYTTLIAVFCREKRMSESEMFFEEAVRF 525
           ++     L+A F +     +S  F   + R 
Sbjct: 618 NL-LVNQLLARFYQANGYVKSACFLTNSSRL 647



 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 159/350 (45%), Gaps = 31/350 (8%)

Query: 337 EKAFRLFLKLVRSENNKPNVL-TYTAMINGYCRDDKLNRA----EMLLGRMKEQGLIPNT 391
           E+AF+LF    RS  +K N L +++A+I+      K   A    + L+ R+K      N 
Sbjct: 55  EEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNM 114

Query: 392 N------------------TYTTLIDGHCKAGNFERAFDLMNLMSRE-GFSPNICTYNAI 432
           +                   ++ LI    + G FE A      +SRE   SP+     +I
Sbjct: 115 SHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEAL----WVSREMKCSPDSKACLSI 170

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
           ++GL ++ R    +   +     GL  D   Y +L     KQ    +   L  +M   GI
Sbjct: 171 LNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGI 230

Query: 493 QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIK 552
           +P+++ YT  I   CR+ +M E+E  FE   + G +P   TY++MI GYC+ GN+  A  
Sbjct: 231 KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYG 290

Query: 553 FFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYC 612
            +  +     +P+ + +GTL+ G CK  +L  AR L+  M++ G+ P       L + +C
Sbjct: 291 LYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHC 350

Query: 613 KIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKL 659
           K  +   A+ +L  +E       + T T L+  LC E +V  A   F K+
Sbjct: 351 KSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400


>AT5G64320.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:25723247-25725439 REVERSE
           LENGTH=730
          Length = 730

 Score =  239 bits (610), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 285/595 (47%), Gaps = 37/595 (6%)

Query: 108 ALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCM---------------V 152
           ++  F W    + +RH   +Y V    L  NG  +    ++  M               +
Sbjct: 94  SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153

Query: 153 RSFAEIGRLKEAVEMVFEMHN-QGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           R + + G   +   ++ EM N     P  ++ N+V++I         A  +F +M +R +
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            P   ++ V++ A+C +  +  A   L  M   G + ++  +  +I    +      AL+
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
              +   MG  P+   F  +I GLCK   I +A +M+  M+ +G+ P+  T+  L++GLC
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM-KEQGLIPN 390
           K G  + A  LF ++      KP ++ +  +I+G+    +L+ A+ +L  M    G++P+
Sbjct: 334 KIGRVDAAKDLFYRI-----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY +LI G+ K G    A ++++ M  +G  PN+ +Y  +VDG CK G++ EAY +L 
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +   +GL+ + V +N LIS  CK+  I +A+ +F +M + G +PD++++ +LI+  C   
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
            +  +     + +  G +    TY ++I  + R G +  A K  + M   G   D I Y 
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLE-- 628
           +LI GLC+  ++D+AR L++ M+  G  P  ++   L      I+  C + ++ + +E  
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL------INGLCRSGMVEEAVEFQ 622

Query: 629 KKLWIRTAT-------TLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMT 676
           K++ +R +T       +L+  LC   ++      F KL       + VT    M+
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677



 Score =  214 bits (544), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 224/472 (47%), Gaps = 33/472 (6%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           + Q ++ S ++  R+ EA++++ EM   G VP+ +T N V+   C+   ++ A  +   M
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEA----------------------------DKWL 238
             RG  PD  +Y  ++   CK+G V  A                            D   
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAK 373

Query: 239 SVMLDR----GFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
           +V+ D     G + D  ++  +I  + ++G    AL   H   + G KPN+ ++T +++G
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
            CK G I +A+ +L EM   G KPN      LI   CK+    +A  +F ++ R +  KP
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR-KGCKP 492

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           +V T+ ++I+G C  D++  A  LL  M  +G++ NT TY TLI+   + G  + A  L+
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
           N M  +G   +  TYN+++ GLC+ G V +A  + +    +G     ++ NILI+  C+ 
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
             +++A+    +M   G  PDI ++ +LI   CR  R+ +    F +    G  P   T+
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
            +++   C+ G +  A        + G VP+   +  L+  +  Q  LD  R
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724


>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
           chr1:23204773-23206665 REVERSE LENGTH=630
          Length = 630

 Score =  239 bits (609), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 232/462 (50%), Gaps = 1/462 (0%)

Query: 138 NGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVD 197
           N  +   H     ++  F    +L  A+ ++ +M   G  PN  TL+ ++   C    + 
Sbjct: 109 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168

Query: 198 YAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLII 257
            A  L ++M   G  P++ ++  ++          EA   +  M+ +G   D  ++ +++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228

Query: 258 SEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
           +  C++G    A    +K     L+P ++ + ++I+GLCK   +  A  + +EM  +G +
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
           PNV T+++LI  LC  G    A RL   ++  + N P+V T++A+I+ + ++ KL  AE 
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEK 347

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
           L   M ++ + P+  TY++LI+G C     + A  +   M  +   P++ TYN ++ G C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407

Query: 438 KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIH 497
           K  RV+E  ++ ++    GL  + VTYNILI    +  D   A  +F +M   G+ P+I 
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467

Query: 498 SYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
           +Y TL+   C+  ++ ++ + FE   R    PT  TY  MI G C+ G +      F  +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           S  G  PD +AY T+ISG C++   +EA  L+  M E G +P
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569



 Score =  224 bits (571), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 220/430 (51%), Gaps = 9/430 (2%)

Query: 148 MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS 207
           +  ++  +    R+ EAV +V +M   G  PNT T N ++           A  L + M 
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVM----LDRGFLVDNASFTLIISEFCEK 263
           A+G  PD  +Y V+V   CK G+   A   L+ M    L+ G L+ N     II   C+ 
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT----IIDGLCKY 269

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
                AL  F +    G++PN++ ++S+I  LC  G    A  +L +M+ +   P+V+T 
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
           +ALID   K+G   +A +L+ ++V+   + P+++TY+++ING+C  D+L+ A+ +   M 
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSID-PSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
            +   P+  TY TLI G CK    E   ++   MS+ G   N  TYN ++ GL + G   
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
            A ++ K+   +G+  + +TYN L+   CK   +++A+ +F  + +S ++P I++Y  +I
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
              C+  ++ +    F      G  P    Y +MI G+CR+G+   A   F  M + G +
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568

Query: 564 PDSIAYGTLI 573
           P+S  Y TLI
Sbjct: 569 PNSGCYNTLI 578



 Score =  217 bits (553), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 225/457 (49%), Gaps = 4/457 (0%)

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           +D A  LF EM      P    +  ++ A  KM            M + G   ++ ++++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           +I+ FC +     AL    K   +G +PN++  +S++ G C    I +A  ++++M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
           ++PN  T   LI GL       +A  L  ++V ++  +P+++TY  ++NG C+    + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
             LL +M++  L P    Y T+IDG CK  + + A +L   M  +G  PN+ TY++++  
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
           LC  GR  +A ++L D     +  D  T++ LI    K+  + +A  L+ +M K  I P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
           I +Y++LI  FC   R+ E++  FE  V     P   TY ++I G+C+   +   ++ F 
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKID 615
            MS  G V +++ Y  LI GL +    D A+ ++  M+  G+ P  +T  TL    CK  
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 616 DCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKV 649
               AMV+ + L++   +  I T   ++  +C   KV
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517



 Score =  210 bits (535), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 227/454 (50%), Gaps = 1/454 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +L +AV +  EM      P+    + ++    +M   D    L E+M   G+  +  +Y 
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++  +C+   +  A   L  M+  G+  +  + + +++ +C     + A+    +    
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G +PN + F ++I GL       +A  +++ MV +G +P++ T+  +++GLCK+G T+ A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           F L  K+ + +  +P VL Y  +I+G C+   ++ A  L   M+ +G+ PN  TY++LI 
Sbjct: 241 FNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
             C  G +  A  L++ M     +P++ T++A++D   K+G++ EA K+  +     ++ 
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
             VTY+ LI+  C    + +A  +F  M      PD+ +Y TLI  FC+ KR+ E    F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            E  + G +    TY  +I G  + G+  MA + F  M   G  P+ + Y TL+ GLCK 
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
            KL++A  +++ +    + P   T   +    CK
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513



 Score =  201 bits (510), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 197/389 (50%), Gaps = 4/389 (1%)

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
            +  ++G+  N   ++ +I   C+R  +  A  +L +M+  G++PN+ T ++L++G C  
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
               +A  L  ++  +   +PN +T+  +I+G    +K + A  L+ RM  +G  P+  T
Sbjct: 165 KRISEAVALVDQMFVT-GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           Y  +++G CK G+ + AF+L+N M +    P +  YN I+DGLCK   + +A  + K+  
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
             G+  + VTY+ LIS  C       A  L S M +  I PD+ +++ LI  F +E ++ 
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           E+E  ++E V+    P+  TY+S+I G+C    L  A + F  M    C PD + Y TLI
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403

Query: 574 SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK---K 630
            G CK  +++E   ++  M ++GL+   VT   L     +  DC  A  I   +      
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463

Query: 631 LWIRTATTLVRKLCSERKVGMAALFFHKL 659
             I T  TL+  LC   K+  A + F  L
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492



 Score =  172 bits (436), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 184/377 (48%), Gaps = 2/377 (0%)

Query: 139 GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           G L+    +   ++    +   + +A+ +  EM  +G+ PN  T + ++   C  G    
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
           A  L  +M  R ++PD  ++  ++ A+ K G ++EA+K    M+ R       +++ +I+
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
            FC       A + F         P+++ + ++I+G CK   +++  E+  EM  +G   
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
           N  T+  LI GL + G  + A  +F ++V S+   PN++TY  +++G C++ KL +A ++
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMV-SDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
              ++   + P   TY  +I+G CKAG  E  +DL   +S +G  P++  YN ++ G C+
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
           KG  +EA  + K+   +G   +   YN LI    +  D + +  L  +M   G   D  S
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD-AS 607

Query: 499 YTTLIAVFCREKRMSES 515
              L+     + R+ +S
Sbjct: 608 TIGLVTNMLHDGRLDKS 624



 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 3/310 (0%)

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
           KL+ A  L G M +    P+   ++ L+    K   F+    L   M   G   N  TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            +++  C++ ++  A  +L      G E + VT + L++ +C    I +A+AL  +M  +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           G QP+  ++ TLI       + SE+    +  V  G  P   TY  ++ G C+ G+  +A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
               ++M      P  + Y T+I GLCK   +D+A  L+  M  KG+ P  VT  +L   
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 611 YCKIDDCCSAMVIL-DRLEKKLW--IRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVN 667
            C       A  +L D +E+K+   + T + L+     E K+  A   + +++      +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 668 RVTLAAFMTA 677
            VT ++ +  
Sbjct: 361 IVTYSSLING 370


>AT1G62930.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:23306534-23308423 FORWARD
           LENGTH=629
          Length = 629

 Score =  237 bits (605), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/414 (32%), Positives = 210/414 (50%), Gaps = 1/414 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R+ EAV +V +M      PNT T N ++           A  L + M ARG  PD  +Y 
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            +V   CK G++  A   L  M       D   +T II   C       AL  F +  + 
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G++PN++ + S+I  LC  G    A  +L +M+ +   PNV T +ALID   K+G   +A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            +L+ ++++   + P++ TY+++ING+C  D+L+ A+ +   M  +   PN  TY TLI 
Sbjct: 345 EKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G CKA   E   +L   MS+ G   N  TYN ++ GL + G    A K+ K    +G+  
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D +TY+IL+   CK   +++AL +F  + KS ++PDI++Y  +I   C+  ++ +    F
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
                 G  P    YT+MI G+CR+G    A   F  M + G +P+S  Y TLI
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577



 Score =  221 bits (564), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 240/489 (49%), Gaps = 1/489 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F    +L  A+ ++ +M   G  P+  TL+ ++   C    +  A  L ++M    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P++ ++  ++          EA   +  M+ RG   D  ++  +++  C++G    AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               K     ++ +++ +T++I+ LC   ++  A  +  EM  +G +PNV T+ +LI  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C  G    A RL   ++  + N PNV+T++A+I+ + ++ KL  AE L   M ++ + P+
Sbjct: 301 CNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY++LI+G C     + A  +  LM  +   PN+ TYN ++ G CK  RV+E  ++ +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    GL  + VTYN LI    +  D   A  +F KM   G+ PDI +Y+ L+   C+  
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           ++ ++ + FE   +    P   TY  MI G C+ G +      F  +S  G  P+ I Y 
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           T+ISG C++   +EA  L+  M E G +P   T  TL     +  D  ++  ++  +   
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599

Query: 631 LWIRTATTL 639
            ++  A+T+
Sbjct: 600 GFVGDASTI 608



 Score =  217 bits (552), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 219/414 (52%), Gaps = 1/414 (0%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           EAV ++  M  +G  P+  T   V+   C+ G +D A  L ++M    +  D   Y  ++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262

Query: 223 VAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK 282
            A C   NV +A    + M ++G   +  ++  +I   C  G  + A R      +  + 
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           PN++ F+++I+   K G + +A ++ +EM+ +   P+++T+++LI+G C     ++A  +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
           F +L+ S++  PNV+TY  +I G+C+  ++     L   M ++GL+ NT TY TLI G  
Sbjct: 383 F-ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           +AG+ + A  +   M  +G  P+I TY+ ++DGLCK G++++A  + +    + +E D  
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           TYNI+I   CK   ++    LF  ++  G++P++  YTT+I+ FCR+    E++  F E 
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
              G +P   TY ++I    R+G+   + +    M   G V D+     +I+ L
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  213 bits (541), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 221/440 (50%), Gaps = 1/440 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +L +AV++  EM     +P+    N ++    +M   D    L E M    +  D  SY 
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++  +C+   +  A   L  M+  G+  D  + + +++ +C     + A+    +   M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
             +PN + F ++I GL       +A  +++ MV +G +P+++T+  +++GLCK+G  + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             L  K+ + +  + +V+ YT +I+  C    +N A  L   M  +G+ PN  TY +LI 
Sbjct: 240 LSLLKKMEKGK-IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
             C  G +  A  L++ M     +PN+ T++A++D   K+G++ EA K+  +     ++ 
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D  TY+ LI+  C    + +A  +F  M      P++ +Y TLI  FC+ KR+ E    F
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            E  + G +    TY ++I G  + G+  MA K F +M   G  PD I Y  L+ GLCK 
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 580 SKLDEARGLYDSMIEKGLIP 599
            KL++A  +++ + +  + P
Sbjct: 479 GKLEKALVVFEYLQKSKMEP 498



 Score =  211 bits (538), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 219/457 (47%), Gaps = 4/457 (0%)

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           +D A  LF EM      P    +  ++ A  KM            M +     D  S+ +
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           +I+ FC +     AL    K   +G +P+++  +S++ G C    I +A  ++++M    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
           ++PN  T   LI GL       +A  L  ++V +   +P++ TY  ++NG C+   ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
             LL +M++  +  +   YTT+ID  C   N   A +L   M  +G  PN+ TYN+++  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
           LC  GR  +A ++L D     +  + VT++ LI    K+  + +A  L+ +M K  I PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
           I +Y++LI  FC   R+ E++  FE  +     P   TY ++I G+C+   +   ++ F 
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKID 615
            MS  G V +++ Y TLI GL +    D A+ ++  M+  G+ P  +T   L    CK  
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 616 DCCSAMVILDRLEKKLW---IRTATTLVRKLCSERKV 649
               A+V+ + L+K      I T   ++  +C   KV
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516



 Score =  179 bits (454), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 184/365 (50%), Gaps = 1/365 (0%)

Query: 139 GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           G ++    +   ++ +      + +A+ +  EM N+G+ PN  T N +++  C  G    
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
           A  L  +M  R ++P+  ++  ++ A+ K G ++EA+K    M+ R    D  +++ +I+
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
            FC       A   F         PN++ + ++I+G CK   +++  E+  EM  +G   
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
           N  T+  LI GL + G  + A ++F K+V S+   P+++TY+ +++G C+  KL +A ++
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMV-SDGVPPDIITYSILLDGLCKYGKLEKALVV 487

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
              +++  + P+  TY  +I+G CKAG  E  +DL   +S +G  PN+  Y  ++ G C+
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
           KG  +EA  + ++   +G   +  TYN LI    +  D   +  L  +M   G   D  +
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607

Query: 499 YTTLI 503
            + +I
Sbjct: 608 ISMVI 612



 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 5/281 (1%)

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
            + A DL   M +    P+I  +N ++  + K  +      + +   +  +  D  +YNI
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           LI+  C+++ +  ALA+  KM K G +PDI + ++L+  +C  KR+SE+    ++     
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
           + P   T+ ++I G       + A+    RM   GC PD   YGT+++GLCK+  +D A 
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 587 GLYDSMIEKGLIPCEV----TRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRK 642
            L   M EKG I  +V    T I     Y  ++D  +    +D    +  + T  +L+R 
Sbjct: 241 SLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 643 LCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
           LC+  +   A+     +++   + N VT +A + A  +  K
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340



 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 3/295 (1%)

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
           D KL+ A  L G M +   +P+   +  L+    K   F+    L   M     S ++ +
Sbjct: 58  DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           YN +++  C++ ++  A  +L      G E D VT + L++ +C    I +A+AL  +M 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
               QP+  ++ TLI       + SE+    +  V  G  P   TY +++ G C+ G++ 
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
           +A+    +M       D + Y T+I  LC    +++A  L+  M  KG+ P  VT  +L 
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297

Query: 609 YEYCKIDDCCSAMVIL-DRLEKKL--WIRTATTLVRKLCSERKVGMAALFFHKLL 660
              C       A  +L D +E+K+   + T + L+     E K+  A   + +++
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352


>AT5G59900.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:24123983-24126706 REVERSE
           LENGTH=907
          Length = 907

 Score =  235 bits (600), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 242/485 (49%), Gaps = 38/485 (7%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F   G+L  A+  + EM + G+  +    N ++   C+ G +  A+    EM  + 
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P   +Y  ++  YC  G + +A +    M  +G      +FT ++S     G    A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + F++ ++  +KPN + +  MIEG C+ G + +AFE L+EM  +G  P+ Y++  LI GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA-----EM-------- 377
           C  G   +A ++F+  +   N + N + YT +++G+CR+ KL  A     EM        
Sbjct: 588 CLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646

Query: 378 ----------------------LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
                                 LL  M ++GL P+   YT++ID   K G+F+ AF + +
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706

Query: 416 LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK-Q 474
           LM  EG  PN  TY A+++GLCK G V EA  +           ++VTY   +    K +
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE 766

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
            D+++A+ L + + K G+  +  +Y  LI  FCR+ R+ E+       +  G  P   TY
Sbjct: 767 VDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
           T+MI   CR  ++  AI+ ++ M++ G  PD +AY TLI G C   ++ +A  L + M+ 
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885

Query: 595 KGLIP 599
           +GLIP
Sbjct: 886 QGLIP 890



 Score =  234 bits (597), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 243/468 (51%), Gaps = 10/468 (2%)

Query: 151 MVRSFAEIGRLKEAVEMVFEM--HNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
           +++ +    R+ + V +VF+M      ++P  +TL+ ++    +      A  LF +M +
Sbjct: 162 LIQHYVRSRRVLDGV-LVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVS 220

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G+ PD   Y  ++ + C++ ++  A + ++ M   G  V+   + ++I   C+K     
Sbjct: 221 VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWE 280

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A+      +   LKP+++ + +++ GLCK    +   EM++EM+C  + P+    ++L++
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE 340

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
           GL K+G  E+A  L +K V      PN+  Y A+I+  C+  K + AE+L  RM + GL 
Sbjct: 341 GLRKRGKIEEALNL-VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           PN  TY+ LID  C+ G  + A   +  M   G   ++  YN++++G CK G +  A   
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
           + +  +  LE   VTY  L+  +C +  I +AL L+ +M   GI P I+++TTL++   R
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
              + ++   F E   +   P + TY  MI GYC EG+++ A +F   M++ G VPD+ +
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRI---TLAYEYCK 613
           Y  LI GLC   +  EA+   D +  KG   CE+  I    L + +C+
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGL-HKG--NCELNEICYTGLLHGFCR 624



 Score =  225 bits (574), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 260/532 (48%), Gaps = 6/532 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V    + G+++EA+ +V  + + G+ PN    N ++   C+      A+ LF+ M   G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P+  +Y +++  +C+ G +  A  +L  M+D G  +    +  +I+  C+ G  + A 
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
            +  +  +  L+P ++ +TS++ G C +G I +A  +  EM  +G  P++YT T L+ GL
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            + G    A +LF ++    N KPN +TY  MI GYC +  +++A   L  M E+G++P+
Sbjct: 518 FRAGLIRDAVKLFNEMAEW-NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
           T +Y  LI G C  G    A   ++ + +     N   Y  ++ G C++G+++EA  + +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    G++ D V Y +LI    K  D K    L  +M   G++PD   YT++I    +  
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
              E+   ++  +  G +P + TYT++I G C+ G +  A     +M     VP+ + YG
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756

Query: 571 TLISGLCK-QSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
             +  L K +  + +A  L+++++ KGL+    T   L   +C+      A  ++ R+  
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815

Query: 630 KLWIR---TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTAC 678
                   T TT++ +LC    V  A   ++ + +     +RV     +  C
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867



 Score =  206 bits (524), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 247/550 (44%), Gaps = 44/550 (8%)

Query: 117 GYSRFRHF---MRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHN 173
           G  +FRHF   M L+      ++  G ++    +   ++RS  E+  L  A EM+  M  
Sbjct: 201 GLVKFRHFGLAMELF----NDMVSVG-IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255

Query: 174 QGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKM----- 228
            G   N    N+++   C+   V  A  + ++++ + + PD  +Y  +V   CK+     
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315

Query: 229 ------------------------------GNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
                                         G + EA   +  ++D G   +   +  +I 
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
             C+      A   F +   +GL+PN + ++ +I+  C+RG +  A   L EMV  G K 
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
           +VY + +LI+G CK G    A     +++ ++  +P V+TYT+++ GYC   K+N+A  L
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMI-NKKLEPTVVTYTSLMGGYCSKGKINKALRL 494

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
              M  +G+ P+  T+TTL+ G  +AG    A  L N M+     PN  TYN +++G C+
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
           +G + +A++ LK+    G+  D  +Y  LI   C      +A      + K   + +   
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS 558
           YT L+  FCRE ++ E+    +E V+ G       Y  +I G  +  +  +       M 
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674

Query: 559 DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCC 618
           D G  PD + Y ++I    K     EA G++D MI +G +P EVT   +    CK     
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734

Query: 619 SAMVILDRLE 628
            A V+  +++
Sbjct: 735 EAEVLCSKMQ 744



 Score =  206 bits (524), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 249/550 (45%), Gaps = 39/550 (7%)

Query: 164 AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
           A+E+  +M + G+ P+      V++  CE+  +  A+ +   M A G   +   Y V++ 
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP 283
             CK   V EA      +  +    D  ++  ++   C+       L    +   +   P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF 343
           +    +S++EGL KRG I++A  +++ +V  G  PN++ + ALID LCK     +A  LF
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK 403
            ++ +    +PN +TY+ +I+ +CR  KL+ A   LG M + GL  +   Y +LI+GHCK
Sbjct: 391 DRMGKI-GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449

Query: 404 AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK---------------- 447
            G+   A   M  M  +   P + TY +++ G C KG++ +A +                
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509

Query: 448 ---MLKDGFHNGL----------------EADKVTYNILISEHCKQADIKQALALFSKMA 488
              +L   F  GL                + ++VTYN++I  +C++ D+ +A     +M 
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
           + GI PD +SY  LI   C   + SE+++F +   +      +  YT ++ G+CREG L 
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
            A+     M   G   D + YG LI G  K        GL   M ++GL P +V   ++ 
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689

Query: 609 YEYCKIDDCCSAMVILDRLEKKLWIR---TATTLVRKLCSERKVGMAALFFHKLLDMDFH 665
               K  D   A  I D +  +  +    T T ++  LC    V  A +   K+  +   
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749

Query: 666 VNRVTLAAFM 675
            N+VT   F+
Sbjct: 750 PNQVTYGCFL 759



 Score =  202 bits (513), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 220/438 (50%), Gaps = 41/438 (9%)

Query: 138 NGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVD 197
           N  L+        ++  +   G++ +A+ +  EM  +G+ P+  T   ++      GL+ 
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIR 524

Query: 198 YAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLII 257
            A  LF EM+   V P+  +Y VM+  YC+ G++ +A ++L  M ++G + D  S+  +I
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584

Query: 258 SEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQA------------- 304
              C  G A+ A  +         + N I +T ++ G C+ G +++A             
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644

Query: 305 ----------------------FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
                                 F +L+EM  +G KP+   +T++ID   K G  ++AF +
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
           +  L+ +E   PN +TYTA+ING C+   +N AE+L  +M+    +PN  TY   +D   
Sbjct: 705 W-DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763

Query: 403 KAG-NFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
           K   + ++A +L N + + G   N  TYN ++ G C++GR++EA +++     +G+  D 
Sbjct: 764 KGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
           +TY  +I+E C++ D+K+A+ L++ M + GI+PD  +Y TLI   C    M ++     E
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882

Query: 522 AVRFGFIP---TKRTYTS 536
            +R G IP   T RT TS
Sbjct: 883 MLRQGLIPNNKTSRTTTS 900



 Score =  119 bits (298), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 4/321 (1%)

Query: 359 YTAMINGYCRDDKLNRAEMLLGRM-KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           +  +I  Y R  ++    ++   M  +  L+P   T + L+ G  K  +F  A +L N M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
              G  P++  Y  ++  LC+   +  A +M+      G + + V YN+LI   CK+  +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
            +A+ +   +A   ++PD+ +Y TL+   C+ +         +E +   F P++   +S+
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
           + G  + G +  A+    R+ D G  P+   Y  LI  LCK  K  EA  L+D M + GL
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398

Query: 598 IPCEVTRITLAYEYCKIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAAL 654
            P +VT   L   +C+     +A+  L  +     KL +    +L+   C    +  A  
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458

Query: 655 FFHKLLDMDFHVNRVTLAAFM 675
           F  ++++       VT  + M
Sbjct: 459 FMAEMINKKLEPTVVTYTSLM 479


>AT2G01740.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:326136-327815 REVERSE
           LENGTH=559
          Length = 559

 Score =  235 bits (599), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 227/465 (48%), Gaps = 45/465 (9%)

Query: 173 NQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVL 232
           ++G  P+  + N V+   C++G V +A+ +   M   G  PD  SY  ++  +C+ G++ 
Sbjct: 49  SRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIR 108

Query: 233 EADKWL-SVMLDRGFLV--DNASFTLIISEFCEKGFATRALRYFHKFSDMGL-----KPN 284
            A   L S+    GF+   D  SF  + + F +         Y      MG+      PN
Sbjct: 109 SASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVY------MGVMLKCCSPN 162

Query: 285 LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 344
           ++ +++ I+  CK G ++ A +    M      PNV T T LIDG CK G  E A  L+ 
Sbjct: 163 VVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY- 221

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
           K +R      NV+TYTA+I+G+C+  ++ RAE +  RM E  + PN+  YTT+IDG  + 
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G+ + A   +  M  +G   +I  Y  I+ GLC  G+++EA ++++D   + L  D V +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHS-------------------------- 498
             +++ + K   +K A+ ++ K+ + G +PD+ +                          
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA 401

Query: 499 ----YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFF 554
               YT LI   C+E    E E  F +    G +P K  YTS I G C++GNL  A K  
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461

Query: 555 HRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            RM   G + D +AY TLI GL  +  + EAR ++D M+  G+ P
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISP 506



 Score =  201 bits (512), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 227/491 (46%), Gaps = 38/491 (7%)

Query: 236 KWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
           K+L+ ++ RG+    +SF  ++S  C+ G    A    H     G +P++I++ S+I+G 
Sbjct: 42  KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101

Query: 296 CKRGSIKQAFEMLEEM-VCQGW--KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN 352
           C+ G I+ A  +LE +    G+  KP++ +  +L +G  K    ++ F     +++    
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC--C 159

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
            PNV+TY+  I+ +C+  +L  A      MK   L PN  T+T LIDG+CKAG+ E A  
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           L   M R   S N+ TY A++DG CKKG +Q A +M      + +E + + Y  +I    
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           ++ D   A+   +KM   G++ DI +Y  +I+  C   ++ E+    E+  +   +P   
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG----------------- 575
            +T+M+  Y + G +  A+  +H++ + G  PD +A  T+I G                 
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE 399

Query: 576 -------------LCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMV 622
                        LCK+    E   L+  + E GL+P +    +     CK  +   A  
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459

Query: 623 ILDRLEKK---LWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACY 679
           +  R+ ++   L +   TTL+  L S+  +  A   F ++L+     +       + A  
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE 519

Query: 680 ESNKYALVSDL 690
           +    A  SDL
Sbjct: 520 KEGNMAAASDL 530



 Score =  164 bits (415), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 169/343 (49%), Gaps = 6/343 (1%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
           C++  + + G L+ AV +  EM    M  N  T   ++   C+ G +  A+ ++  M   
Sbjct: 203 CLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
            V P+S  Y  ++  + + G+   A K+L+ ML++G  +D  ++ +IIS  C  G    A
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
                      L P+++ FT+M+    K G +K A  M  +++ +G++P+V   + +IDG
Sbjct: 323 TEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG 382

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
           + K G   +A   F         K N + YT +I+  C++      E L  ++ E GL+P
Sbjct: 383 IAKNGQLHEAIVYFCI------EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           +   YT+ I G CK GN   AF L   M +EG   ++  Y  ++ GL  KG + EA ++ 
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
            +  ++G+  D   +++LI  + K+ ++  A  L   M + G+
Sbjct: 497 DEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539



 Score =  155 bits (392), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 185/377 (49%), Gaps = 6/377 (1%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           + +F + G L+ A++    M    + PN  T   ++   C+ G ++ A  L++EM    +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
             +  +Y  ++  +CK G +  A++  S M++     ++  +T II  F ++G +  A++
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
           +  K  + G++ ++  +  +I GLC  G +K+A E++E+M      P++   T +++   
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
           K G  + A  ++ KL+     +P+V+  + MI+G  ++ +L+ A +     K      N 
Sbjct: 350 KSGRMKAAVNMYHKLIE-RGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK-----AND 403

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
             YT LID  CK G+F     L + +S  G  P+   Y + + GLCK+G + +A+K+   
Sbjct: 404 VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTR 463

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
               GL  D + Y  LI     +  + +A  +F +M  SGI PD   +  LI  + +E  
Sbjct: 464 MVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN 523

Query: 512 MSESEMFFEEAVRFGFI 528
           M+ +     +  R G +
Sbjct: 524 MAAASDLLLDMQRRGLV 540



 Score =  110 bits (274), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 174/400 (43%), Gaps = 43/400 (10%)

Query: 63  DSFHQHTHMRVSPPRLHLSIDPDSLTHEQAVTTVASLAG--NAGSM-VALSFFHWAIGYS 119
           D+F +   ++++    H S+  D+L+    VT    + G   AG + VA+S       Y 
Sbjct: 171 DTFCKSGELQLALKSFH-SMKRDALS-PNVVTFTCLIDGYCKAGDLEVAVSL------YK 222

Query: 120 RFRHF-MRLYIVCATSLIGN----GNLQKAHEVMQCMVR---------------SFAEIG 159
             R   M L +V  T+LI      G +Q+A E+   MV                 F + G
Sbjct: 223 EMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRG 282

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
               A++ + +M NQGM  +     +++   C  G +  A  + E+M    + PD   + 
Sbjct: 283 DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFT 342

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            M+ AY K G +  A      +++RGF  D  + + +I    + G    A+ YF      
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI---- 398

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
             K N + +T +I+ LCK G   +   +  ++   G  P+ + +T+ I GLCK+G    A
Sbjct: 399 -EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           F+L  ++V+ E    ++L YT +I G      +  A  +   M   G+ P++  +  LI 
Sbjct: 458 FKLKTRMVQ-EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
            + K GN   A DL+  M R G         A+ D  C K
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGL------VTAVSDADCSK 550


>AT1G62680.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:23208247-23209893 REVERSE
           LENGTH=548
          Length = 548

 Score =  234 bits (598), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 238/458 (51%), Gaps = 5/458 (1%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +L +A+++  +M      P+    N ++    ++   D    L ++M   G+  D  ++ 
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++  +C    V  A   L  ML  G+  D  +   +++ FC +   + A+    K  ++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G KP+++ + ++I+ LCK   +  AF+  +E+  +G +PNV T+TAL++GLC       A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            RL   +++ +   PNV+TY+A+++ + ++ K+  A+ L   M    + P+  TY++LI+
Sbjct: 245 ARLLSDMIKKKIT-PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G C     + A  + +LM  +G   ++ +YN +++G CK  RV++  K+ ++    GL +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           + VTYN LI    +  D+ +A   FS+M   GI PDI +Y  L+   C    + ++ + F
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
           E+  +        TYT++I G C+ G +  A   F  +S  G  PD + Y T++SGLC +
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483

Query: 580 SKLDEARGLYDSMIEKGLIPCEVT----RITLAYEYCK 613
             L E   LY  M ++GL+  + T     ITL+ E  K
Sbjct: 484 GLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIK 521



 Score =  206 bits (524), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 203/412 (49%), Gaps = 4/412 (0%)

Query: 153 RSFAEIGRLKE---AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
           R  + I +LK+    + +  +M   G+  +  T N+V+   C    V  A  +  +M   
Sbjct: 90  RLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKL 149

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           G  PD  +   +V  +C+   V +A   +  M++ G+  D  ++  II   C+      A
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
             +F +    G++PN++ +T+++ GLC       A  +L +M+ +   PNV T++AL+D 
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
             K G   +A  LF ++VR   + P+++TY+++ING C  D+++ A  +   M  +G + 
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSID-PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           +  +Y TLI+G CKA   E    L   MS+ G   N  TYN ++ G  + G V +A +  
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
                 G+  D  TYNIL+   C   ++++AL +F  M K  +  DI +YTT+I   C+ 
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
            ++ E+   F      G  P   TYT+M+ G C +G L      + +M   G
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500



 Score =  183 bits (464), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 198/408 (48%), Gaps = 7/408 (1%)

Query: 276 FSDMGLK---PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCK 332
           FSDM      P++++F  ++  + K         + ++M   G + ++YT   +I+  C 
Sbjct: 73  FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132

Query: 333 KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
                 A  +  K+++    +P+ +T  +++NG+CR ++++ A  L+ +M E G  P+  
Sbjct: 133 CFQVSLALSILGKMLKL-GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG 452
            Y  +ID  CK      AFD    + R+G  PN+ TY A+V+GLC   R  +A ++L D 
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
               +  + +TY+ L+    K   + +A  LF +M +  I PDI +Y++LI   C   R+
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
            E+   F+  V  G +    +Y ++I G+C+   +   +K F  MS  G V +++ Y TL
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK-- 630
           I G  +   +D+A+  +  M   G+ P   T   L    C   +   A+VI + ++K+  
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431

Query: 631 -LWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
            L I T TT++R +C   KV  A   F  L       + VT    M+ 
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479



 Score =  169 bits (427), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 172/342 (50%), Gaps = 1/342 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V  F    R+ +AV +V +M   G  P+    N ++   C+   V+ A   F+E+  +G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P+  +Y  +V   C      +A + LS M+ +    +  +++ ++  F + G    A 
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F +   M + P+++ ++S+I GLC    I +A +M + MV +G   +V ++  LI+G 
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK    E   +LF ++ +      N +TY  +I G+ +   +++A+    +M   G+ P+
Sbjct: 341 CKAKRVEDGMKLFREMSQ-RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY  L+ G C  G  E+A  +   M +     +I TY  ++ G+CK G+V+EA+ +  
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
                GL+ D VTY  ++S  C +  + +  AL++KM + G+
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  162 bits (409), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 195/410 (47%), Gaps = 12/410 (2%)

Query: 301 IKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYT 360
           +  A ++  +MV     P++     L+  + K    +    L  K+      + ++ T+ 
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRNDLYTFN 124

Query: 361 AMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE 420
            +IN +C   +++ A  +LG+M + G  P+  T  +L++G C+      A  L++ M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 421 GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
           G+ P+I  YNAI+D LCK  RV +A+   K+    G+  + VTY  L++  C  +    A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
             L S M K  I P++ +Y+ L+  F +  ++ E++  FEE VR    P   TY+S+I G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 541 YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC 600
            C    +  A + F  M   GC+ D ++Y TLI+G CK  ++++   L+  M ++GL+  
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 601 EVTRITLAYEYCKIDDCCSAMVILDRLE-----KKLWIRTATTLVRKLCSERKVGMAALF 655
            VT  TL   + +  D   A     +++       +W  T   L+  LC   ++  A + 
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW--TYNILLGGLCDNGELEKALVI 422

Query: 656 FHKLLDMDFHVNRVTLAAFMTACYESNK----YALVSDLSARIYKDNRLT 701
           F  +   +  ++ VT    +    ++ K    ++L   LS +  K + +T
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472



 Score =  143 bits (360), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 138/278 (49%), Gaps = 1/278 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V       R  +A  ++ +M  + + PN  T + ++    + G V  A+ LFEEM    
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD  +Y  ++   C    + EA++   +M+ +G L D  S+  +I+ FC+       +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + F + S  GL  N + + ++I+G  + G + +A E   +M   G  P+++T+  L+ GL
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C  G  EKA  +F  + + E +  +++TYT +I G C+  K+  A  L   +  +GL P+
Sbjct: 411 CDNGELEKALVIFEDMQKREMD-LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
             TYTT++ G C  G       L   M +EG   N CT
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 143/335 (42%), Gaps = 41/335 (12%)

Query: 368 RDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC 427
           RD KLN A  L   M +    P+   +  L+    K   ++    L   M   G   ++ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 428 TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM 487
           T+N +++  C   +V  A  +L      G E D+VT   L++  C++  +  A++L  KM
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 488 AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYC----- 542
            + G +PDI +Y  +I   C+ KR++++  FF+E  R G  P   TYT+++ G C     
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 543 ------------------------------REGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
                                         + G +  A + F  M      PD + Y +L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW 632
           I+GLC   ++DEA  ++D M+ KG +   V+  TL   +CK       M +   + ++  
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 633 IR---TATTLVRKLCSERKVGMAALFFHKLLDMDF 664
           +    T  TL++       V  A  FF +   MDF
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQ---MDF 393


>AT3G22470.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:7966066-7967925 REVERSE
           LENGTH=619
          Length = 619

 Score =  232 bits (592), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 246/511 (48%), Gaps = 20/511 (3%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           ++ +A+++   M     +P     N +          D      + M   G+  D  +  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +M+  YC+   +L A   L      G+  D  +F+ +++ FC +G  + A+    +  +M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
             +P+L+  +++I GLC +G + +A  +++ MV  G++P+  T+  +++ LCK G +  A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             LF K+    N K +V+ Y+ +I+  C+D   + A  L   M+ +G+  +  TY++LI 
Sbjct: 230 LDLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G C  G ++    ++  M      P++ T++A++D   K+G++ EA ++  +    G+  
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D +TYN LI   CK+  + +A  +F  M   G +PDI +Y+ LI  +C+ KR+ +    F
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            E    G IP   TY +++ G+C+ G L  A + F  M   G  P  + YG L+ GLC  
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITLAY-----------EYCKIDDCCSAMVILDRLE 628
            +L++A  +++ M        + +R+TL                K+DD  S    L    
Sbjct: 469 GELNKALEIFEKM--------QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520

Query: 629 KKLWIRTATTLVRKLCSERKVGMAALFFHKL 659
            K  + T   ++  LC +  +  A + F K+
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551



 Score =  228 bits (582), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 224/456 (49%), Gaps = 1/456 (0%)

Query: 148 MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS 207
           M  M+  +    +L  A  ++      G  P+T T + ++   C  G V  A  L + M 
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
                PD  +   ++   C  G V EA   +  M++ GF  D  ++  +++  C+ G + 
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
            AL  F K  +  +K +++ ++ +I+ LCK GS   A  +  EM  +G K +V T+++LI
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
            GLC  G  +   ++  +++   N  P+V+T++A+I+ + ++ KL  A+ L   M  +G+
Sbjct: 288 GGLCNDGKWDDGAKMLREMI-GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            P+T TY +LIDG CK      A  + +LM  +G  P+I TY+ +++  CK  RV +  +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           + ++    GL  + +TYN L+   C+   +  A  LF +M   G+ P + +Y  L+   C
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
               ++++   FE+  +         Y  +I G C    +  A   F  +SD G  PD +
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526

Query: 568 AYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
            Y  +I GLCK+  L EA  L+  M E G  P + T
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562



 Score =  227 bits (579), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 217/440 (49%), Gaps = 7/440 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V  F   GR+ EAV +V  M      P+  T++ ++   C  G V  A  L + M   G
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD  +Y  ++   CK GN   A      M +R        ++++I   C+ G    AL
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F++    G+K +++ ++S+I GLC  G      +ML EM+ +   P+V T +ALID  
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K+G   +A  L+ +++ +    P+ +TY ++I+G+C+++ L+ A  +   M  +G  P+
Sbjct: 326 VKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY+ LI+ +CKA   +    L   +S +G  PN  TYN +V G C+ G++  A ++ +
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    G+    VTY IL+   C   ++ +AL +F KM KS +   I  Y  +I   C   
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           ++ ++   F      G  P   TY  MI G C++G+L+ A   F +M + GC PD   Y 
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYN 564

Query: 571 TLI------SGLCKQSKLDE 584
            LI      SGL    +L E
Sbjct: 565 ILIRAHLGGSGLISSVELIE 584



 Score =  196 bits (497), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 186/375 (49%), Gaps = 1/375 (0%)

Query: 164 AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
           A+++  +M  + +  +    ++V+   C+ G  D A  LF EM  +G+  D  +Y  ++ 
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP 283
             C  G   +  K L  M+ R  + D  +F+ +I  F ++G    A   +++    G+ P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF 343
           + I + S+I+G CK   + +A +M + MV +G +P++ T++ LI+  CK    +   RLF
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK 403
            + + S+   PN +TY  ++ G+C+  KLN A+ L   M  +G+ P+  TY  L+DG C 
Sbjct: 409 -REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467

Query: 404 AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
            G   +A ++   M +   +  I  YN I+ G+C   +V +A+ +       G++ D VT
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
           YN++I   CK+  + +A  LF KM + G  PD  +Y  LI        +  S    EE  
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587

Query: 524 RFGFIPTKRTYTSMI 538
             GF     T   +I
Sbjct: 588 VCGFSADSSTIKMVI 602



 Score =  181 bits (460), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 188/396 (47%), Gaps = 4/396 (1%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P  I+F  +   + +           + M   G + ++YT T +I+  C+K     AF +
Sbjct: 68  PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
             +  +    +P+ +T++ ++NG+C + +++ A  L+ RM E    P+  T +TLI+G C
Sbjct: 128 LGRAWKL-GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
             G    A  L++ M   GF P+  TY  +++ LCK G    A  + +      ++A  V
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
            Y+I+I   CK      AL+LF++M   GI+ D+ +Y++LI   C + +  +      E 
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
           +    IP   T++++I  + +EG L  A + ++ M   G  PD+I Y +LI G CK++ L
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR---TATTL 639
            EA  ++D M+ KG  P  VT   L   YCK       M +   +  K  I    T  TL
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
           V   C   K+  A   F +++      + VT    +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462



 Score =  162 bits (411), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 160/322 (49%), Gaps = 35/322 (10%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G+  +  +M+ EM  + ++P+  T + ++ +  + G +  A+ L+ EM  RG+ PD+ +Y
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             ++  +CK   + EA++   +M+ +G   D  +++++I+ +C+       +R F + S 
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
            GL PN I + +++ G C+ G +  A E+ +EMV +G  P+V T+  L+DGLC  G   K
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473

Query: 339 AFRLFLKLVRS----------------------------------ENNKPNVLTYTAMIN 364
           A  +F K+ +S                                  +  KP+V+TY  MI 
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533

Query: 365 GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP 424
           G C+   L+ A+ML  +MKE G  P+  TY  LI  H        + +L+  M   GFS 
Sbjct: 534 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 593

Query: 425 NICTYNAIVDGLCKKGRVQEAY 446
           +  T   ++D L  + R+ +++
Sbjct: 594 DSSTIKMVIDMLSDR-RLDKSF 614



 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 3/263 (1%)

Query: 357 LTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNL 416
           L+Y   +     D K+N A  L   M +   +P    +  L     +   ++        
Sbjct: 36  LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           M   G   ++ T   +++  C+K ++  A+ +L   +  G E D +T++ L++  C +  
Sbjct: 96  MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
           + +A+AL  +M +   +PD+ + +TLI   C + R+SE+ +  +  V +GF P + TY  
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           ++   C+ GN  +A+  F +M +       + Y  +I  LCK    D+A  L++ M  KG
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 597 LIPCEVTRITLAYEYC---KIDD 616
           +    VT  +L    C   K DD
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDD 298



 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 35/218 (16%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ S+ +  R+ + + +  E+ ++G++PNT T N ++   C+ G ++ A+ LF+EM +RG
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450

Query: 211 VHPDSASYRVMVVAYCKMGNVLEA---------------------------------DKW 237
           V P   +Y +++   C  G + +A                                 D W
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510

Query: 238 --LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
                + D+G   D  ++ ++I   C+KG  + A   F K  + G  P+   +  +I   
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570

Query: 296 CKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
                +  + E++EEM   G+  +  T   +ID L  +
Sbjct: 571 LGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608


>AT1G12700.1 | Symbols:  | ATP binding;nucleic acid
           binding;helicases | chr1:4323722-4326227 REVERSE
           LENGTH=735
          Length = 735

 Score =  232 bits (592), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 242/480 (50%), Gaps = 6/480 (1%)

Query: 153 RSFAEIGRLKE---AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
           R F+ I R K+    ++   ++   G+  N  TLN+++   C      +A  +  ++   
Sbjct: 93  RFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL 152

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           G  PD+ ++  ++      G V EA   +  M++ G   D  ++  I++  C  G  + A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           L    K  +  +K ++  ++++I+ LC+ G I  A  + +EM  +G K +V T+ +L+ G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 330 LCKKG-WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
           LCK G W + A  L LK + S    PNV+T+  +++ + ++ KL  A  L   M  +G+ 
Sbjct: 273 LCKAGKWNDGA--LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           PN  TY TL+DG+C       A ++++LM R   SP+I T+ +++ G C   RV +  K+
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
            ++    GL A+ VTY+IL+   C+   IK A  LF +M   G+ PD+ +Y  L+   C 
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
             ++ ++   FE+  +         YT++I G C+ G +  A   F  +   G  P+ + 
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLE 628
           Y  +ISGLCK+  L EA  L   M E G  P + T  TL   + +  D  ++  +++ ++
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570



 Score =  214 bits (544), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 235/490 (47%), Gaps = 9/490 (1%)

Query: 105 SMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEV--MQCMVRSFAEIGRLK 162
           S+V  S F  AI  +R + F  +   C   L  NG    AH +  +  M+  F    +  
Sbjct: 87  SLVDFSRFFSAI--ARTKQFNLVLDFCK-QLELNG---IAHNIYTLNIMINCFCRCCKTC 140

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
            A  ++ ++   G  P+T T N ++K     G V  A  L + M   G  PD  +Y  +V
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIV 200

Query: 223 VAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK 282
              C+ G+   A   L  M +R    D  +++ II   C  G    A+  F +    G+K
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
            +++ + S++ GLCK G       +L++MV +   PNV T   L+D   K+G  ++A  L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
           + +++ +    PN++TY  +++GYC  ++L+ A  +L  M      P+  T+T+LI G+C
Sbjct: 321 YKEMI-TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
                +    +   +S+ G   N  TY+ +V G C+ G+++ A ++ ++   +G+  D +
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           TY IL+   C    +++AL +F  + KS +   I  YTT+I   C+  ++ ++   F   
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
              G  P   TYT MI G C++G+L+ A     +M + G  P+   Y TLI    +   L
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559

Query: 583 DEARGLYDSM 592
             +  L + M
Sbjct: 560 TASAKLIEEM 569



 Score =  213 bits (542), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 216/426 (50%), Gaps = 1/426 (0%)

Query: 204 EEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEK 263
           +++   G+  +  +  +M+  +C+      A   L  ++  G+  D  +F  +I     +
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
           G  + A+    +  + G +P+++ + S++ G+C+ G    A ++L +M  +  K +V+T+
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
           + +ID LC+ G  + A  LF K + ++  K +V+TY +++ G C+  K N   +LL  M 
Sbjct: 232 STIIDSLCRDGCIDAAISLF-KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
            + ++PN  T+  L+D   K G  + A +L   M   G SPNI TYN ++DG C + R+ 
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
           EA  ML     N    D VT+  LI  +C    +   + +F  ++K G+  +  +Y+ L+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
             FC+  ++  +E  F+E V  G +P   TY  ++ G C  G L  A++ F  +      
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVI 623
              + Y T+I G+CK  K+++A  L+ S+  KG+ P  +T   +    CK      A ++
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530

Query: 624 LDRLEK 629
           L ++E+
Sbjct: 531 LRKMEE 536



 Score =  188 bits (478), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 197/384 (51%), Gaps = 6/384 (1%)

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+  N+     MI   C+      A+ +L +++  G++P+  T   LI GL  +G   +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 340 FRLFLKLVRSENN-KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
             L  ++V  EN  +P+V+TY +++NG CR    + A  LL +M+E+ +  +  TY+T+I
Sbjct: 178 VVLVDRMV--ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
           D  C+ G  + A  L   M  +G   ++ TYN++V GLCK G+  +   +LKD     + 
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            + +T+N+L+    K+  +++A  L+ +M   GI P+I +Y TL+  +C + R+SE+   
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
            +  VR    P   T+TS+I GYC    +   +K F  +S  G V +++ Y  L+ G C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415

Query: 579 QSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK---LWIRT 635
             K+  A  L+  M+  G++P  +T   L    C       A+ I + L+K    L I  
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475

Query: 636 ATTLVRKLCSERKVGMAALFFHKL 659
            TT++  +C   KV  A   F  L
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSL 499



 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 153/309 (49%), Gaps = 3/309 (0%)

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           N+ T   MIN +CR  K   A  +LG++ + G  P+T T+ TLI G    G    A  L+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
           + M   G  P++ TYN+IV+G+C+ G    A  +L+      ++AD  TY+ +I   C+ 
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
             I  A++LF +M   GI+  + +Y +L+   C+  + ++  +  ++ V    +P   T+
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
             ++  + +EG L  A + +  M   G  P+ I Y TL+ G C Q++L EA  + D M+ 
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361

Query: 595 KGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKLCSERKVGM 651
               P  VT  +L   YC +      M +   + K+  +  A T   LV+  C   K+ +
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421

Query: 652 AALFFHKLL 660
           A   F +++
Sbjct: 422 AEELFQEMV 430



 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 139/360 (38%), Gaps = 38/360 (10%)

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
           D K + A  L   M     +P+   ++       +   F    D    +   G + NI T
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
            N +++  C+  +   AY +L      G E D  T+N LI     +  + +A+ L  +M 
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
           ++G QPD+ +Y +++   CR    S +     +           TY+++I   CR+G + 
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLC------------------------------- 577
            AI  F  M   G     + Y +L+ GLC                               
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 578 ----KQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW- 632
               K+ KL EA  LY  MI +G+ P  +T  TL   YC  +    A  +LD + +    
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 633 --IRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDL 690
             I T T+L++  C  ++V      F  +       N VT +  +    +S K  L  +L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425



 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 89/180 (49%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V+ F + G++K A E+  EM + G++P+  T  +++   C+ G ++ A  +FE++    
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +      Y  ++   CK G V +A      +  +G   +  ++T++IS  C+KG  + A 
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               K  + G  PN   + ++I    + G +  + +++EEM   G+  +  +   +ID L
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 15/145 (10%)

Query: 128 YIVCATSLIGNGNLQKAHEVMQCMVRSFAEI---------------GRLKEAVEMVFEMH 172
           Y +    L  NG L+KA E+ + + +S  ++               G++++A  +   + 
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 173 NQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVL 232
            +G+ PN  T  +++   C+ G +  A  L  +M   G  P+  +Y  ++ A+ + G++ 
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560

Query: 233 EADKWLSVMLDRGFLVDNASFTLII 257
            + K +  M   GF  D +S  ++I
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVI 585


>AT1G12300.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:4184163-4186076 REVERSE
           LENGTH=637
          Length = 637

 Score =  232 bits (591), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 217/411 (52%), Gaps = 4/411 (0%)

Query: 252 SFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM 311
           + +++I+ FC       A     K   +G +PN I F+++I GLC  G + +A E+++ M
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184

Query: 312 VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK 371
           V  G KP++ T   L++GLC  G   +A  L  K+V     +PN +TY  ++N  C+  +
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCKSGQ 243

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
              A  LL +M+E+ +  +   Y+ +IDG CK G+ + AF+L N M  +G + NI TYN 
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303

Query: 432 IVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           ++ G C  GR  +  K+L+D     +  + VT+++LI    K+  +++A  L  +M   G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
           I PD  +YT+LI  FC+E  + ++    +  V  G  P  RT+  +I GYC+   +   +
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423

Query: 552 KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEY 611
           + F +MS  G V D++ Y TLI G C+  KL+ A+ L+  M+ + + P  VT   L    
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483

Query: 612 CKIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKL 659
           C   +   A+ I +++EK   +L I     ++  +C+  KV  A   F  L
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534



 Score =  221 bits (563), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 221/458 (48%), Gaps = 3/458 (0%)

Query: 144 AHEV--MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQY 201
           AH +  +  M+  F    +L  A   + ++   G  PNT T + ++   C  G V  A  
Sbjct: 120 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179

Query: 202 LFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFC 261
           L + M   G  PD  +   +V   C  G   EA   +  M++ G   +  ++  +++  C
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239

Query: 262 EKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVY 321
           + G    A+    K  +  +K + + ++ +I+GLCK GS+  AF +  EM  +G   N+ 
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
           T+  LI G C  G  +   +L   +++ + N PNV+T++ +I+ + ++ KL  AE L   
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKIN-PNVVTFSVLIDSFVKEGKLREAEELHKE 358

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
           M  +G+ P+T TYT+LIDG CK  + ++A  +++LM  +G  PNI T+N +++G CK  R
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418

Query: 442 VQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTT 501
           + +  ++ +     G+ AD VTYN LI   C+   +  A  LF +M    + P+I +Y  
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478

Query: 502 LIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
           L+   C      ++   FE+  +         Y  +I G C    +  A   F  +   G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538

Query: 562 CVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
             P    Y  +I GLCK+  L EA  L+  M E G  P
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576



 Score =  221 bits (563), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 209/415 (50%), Gaps = 1/415 (0%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           GR+ EA+E+V  M   G  P+  T+N ++   C  G    A  L ++M   G  P++ +Y
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             ++   CK G    A + L  M +R   +D   +++II   C+ G    A   F++   
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
            G+  N+I +  +I G C  G      ++L +M+ +   PNV T + LID   K+G   +
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A  L  +++      P+ +TYT++I+G+C+++ L++A  ++  M  +G  PN  T+  LI
Sbjct: 352 AEELHKEMIH-RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
           +G+CKA   +   +L   MS  G   +  TYN ++ G C+ G++  A ++ ++     + 
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            + VTY IL+   C   + ++AL +F K+ KS ++ DI  Y  +I   C   ++ ++   
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           F      G  P  +TY  MI G C++G L+ A   F +M + G  PD   Y  LI
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585



 Score =  219 bits (558), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 219/440 (49%), Gaps = 5/440 (1%)

Query: 148 MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS 207
           +  +V      G+  EA+ ++ +M   G  PN  T   V+ + C+ G    A  L  +M 
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
            R +  D+  Y +++   CK G++  A    + M  +G   +  ++ ++I  FC  G   
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
              +         + PN++ F+ +I+   K G +++A E+ +EM+ +G  P+  T+T+LI
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           DG CK+   +KA ++ + L+ S+   PN+ T+  +INGYC+ ++++    L  +M  +G+
Sbjct: 376 DGFCKENHLDKANQM-VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
           + +T TY TLI G C+ G    A +L   M      PNI TY  ++DGLC  G  ++A +
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           + +    + +E D   YNI+I   C  + +  A  LF  +   G++P + +Y  +I   C
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS- 566
           ++  +SE+E+ F +    G  P   TY  +I  +  +G+ T ++K    +   G   D+ 
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 614

Query: 567 ---IAYGTLISGLCKQSKLD 583
              +    L  G  K+S LD
Sbjct: 615 TIKMVIDMLSDGRLKKSFLD 634



 Score =  215 bits (548), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 242/501 (48%), Gaps = 6/501 (1%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           +A+++  +M +   +P     + +     +    D    L ++M  +G+  +  +  +M+
Sbjct: 71  DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130

Query: 223 VAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK 282
             +C+   +  A   +  ++  G+  +  +F+ +I+  C +G  + AL    +  +MG K
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P+LI   +++ GLC  G   +A  ++++MV  G +PN  T+  +++ +CK G T  A  L
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
             K+    N K + + Y+ +I+G C+   L+ A  L   M+ +G+  N  TY  LI G C
Sbjct: 251 LRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
            AG ++    L+  M +   +PN+ T++ ++D   K+G+++EA ++ K+  H G+  D +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           TY  LI   CK+  + +A  +   M   G  P+I ++  LI  +C+  R+ +    F + 
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
              G +    TY ++I G+C  G L +A + F  M      P+ + Y  L+ GLC   + 
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAY----EYCKIDDCCSAMVILDRLEKKLWIRTATT 638
           ++A  +++  IEK  +  ++    +         K+DD       L     K  ++T   
Sbjct: 490 EKALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548

Query: 639 LVRKLCSERKVGMAALFFHKL 659
           ++  LC +  +  A L F K+
Sbjct: 549 MIGGLCKKGPLSEAELLFRKM 569



 Score =  207 bits (527), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 232/480 (48%), Gaps = 4/480 (0%)

Query: 153 RSFAEIGRLKE---AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
           R F+ I + K+    + +  +M  +G+  N  TL++++   C    +  A     ++   
Sbjct: 93  RLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKL 152

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           G  P++ ++  ++   C  G V EA + +  M++ G   D  +   +++  C  G    A
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           +    K  + G +PN + +  ++  +CK G    A E+L +M  +  K +   ++ +IDG
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
           LCK G  + AF LF ++   +    N++TY  +I G+C   + +    LL  M ++ + P
Sbjct: 273 LCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           N  T++ LID   K G    A +L   M   G +P+  TY +++DG CK+  + +A +M+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
                 G + +  T+NILI+ +CK   I   L LF KM+  G+  D  +Y TLI  FC  
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
            +++ ++  F+E V     P   TY  ++ G C  G    A++ F ++       D   Y
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
             +I G+C  SK+D+A  L+ S+  KG+ P   T   +    CK      A ++  ++E+
Sbjct: 512 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571



 Score =  153 bits (387), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 197/460 (42%), Gaps = 76/460 (16%)

Query: 261 CEKGFAT---RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
           CE+GF+    R L Y  +     L+  L++  +             A ++  +M+     
Sbjct: 42  CERGFSAFSDRNLSYRER-----LRSGLVDIKA-----------DDAIDLFRDMIHSRPL 85

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP---NVLTYTAMINGYCRDDKLNR 374
           P V   + L   + K     K + L L L +    K    N+ T + MIN +CR  KL  
Sbjct: 86  PTVIDFSRLFSAIAKT----KQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCL 141

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVD 434
           A   +G++ + G  PNT T++TLI+G C  G    A +L++ M   G  P++ T N +V+
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201

Query: 435 GL-----------------------------------CKKGRVQEAYKMLKDGFHNGLEA 459
           GL                                   CK G+   A ++L+      ++ 
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D V Y+I+I   CK   +  A  LF++M   GI  +I +Y  LI  FC   R  +     
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            + ++    P   T++ +I  + +EG L  A +    M   G  PD+I Y +LI G CK+
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLE--KKLWIR--- 634
           + LD+A  + D M+ KG  P   T   L   YCK      A  I D LE  +K+ +R   
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK------ANRIDDGLELFRKMSLRGVV 435

Query: 635 ----TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVT 670
               T  TL++  C   K+ +A   F +++      N VT
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475


>AT1G12775.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:4353906-4355840 FORWARD
           LENGTH=644
          Length = 644

 Score =  231 bits (589), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 246/501 (49%), Gaps = 6/501 (1%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           +AV++  +M     +P     N +     +    +    L ++M ++G+     +  +M+
Sbjct: 71  DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130

Query: 223 VAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK 282
             +C+   +  A   +  ++  G+  D   F  +++  C +   + AL    +  +MG K
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P LI   +++ GLC  G +  A  +++ MV  G++PN  T+  +++ +CK G T  A  L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
             K+    N K + + Y+ +I+G C+D  L+ A  L   M+ +G   +  TY TLI G C
Sbjct: 251 LRKM-EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
            AG ++    L+  M +   SPN+ T++ ++D   K+G+++EA ++LK+    G+  + +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           TYN LI   CK+  +++A+ +   M   G  PDI ++  LI  +C+  R+ +    F E 
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
              G I    TY +++ G+C+ G L +A K F  M      PD ++Y  L+ GLC   +L
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489

Query: 583 DEARGLYDSMIEKGLIPCEV-TRITLAYEYC---KIDDCCSAMVILDRLEKKLWIRTATT 638
           ++A  ++   IEK  +  ++   + + +  C   K+DD       L     KL  R    
Sbjct: 490 EKALEIFGK-IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548

Query: 639 LVRKLCSERKVGMAALFFHKL 659
           ++ +LC +  +  A + F K+
Sbjct: 549 MISELCRKDSLSKADILFRKM 569



 Score =  230 bits (586), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 241/487 (49%), Gaps = 3/487 (0%)

Query: 144 AHEV--MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQY 201
           AH +  +  M+  F    +L  A   + ++   G  P+T   N ++   C    V  A  
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179

Query: 202 LFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFC 261
           L + M   G  P   +   +V   C  G V +A   +  M++ GF  +  ++  +++  C
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239

Query: 262 EKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVY 321
           + G    A+    K  +  +K + + ++ +I+GLCK GS+  AF +  EM  +G+K ++ 
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
           T+  LI G C  G  +   +L   +++ + + PNV+T++ +I+ + ++ KL  A+ LL  
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS-PNVVTFSVLIDSFVKEGKLREADQLLKE 358

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
           M ++G+ PNT TY +LIDG CK    E A  +++LM  +G  P+I T+N +++G CK  R
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418

Query: 442 VQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTT 501
           + +  ++ ++    G+ A+ VTYN L+   C+   ++ A  LF +M    ++PDI SY  
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478

Query: 502 LIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
           L+   C    + ++   F +  +         Y  +I G C    +  A   F  +   G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538

Query: 562 CVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAM 621
              D+ AY  +IS LC++  L +A  L+  M E+G  P E+T   L   +   DD  +A 
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598

Query: 622 VILDRLE 628
            +++ ++
Sbjct: 599 ELIEEMK 605



 Score =  225 bits (573), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 218/449 (48%), Gaps = 2/449 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R+ EA+E+V  M   G  P   TLN ++   C  G V  A  L + M   G  P+  +Y 
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            ++   CK G    A + L  M +R   +D   +++II   C+ G    A   F++    
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G K ++I + ++I G C  G      ++L +M+ +   PNV T + LID   K+G   +A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            +L LK +      PN +TY ++I+G+C++++L  A  ++  M  +G  P+  T+  LI+
Sbjct: 353 DQL-LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G+CKA   +   +L   MS  G   N  TYN +V G C+ G+++ A K+ ++     +  
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D V+Y IL+   C   ++++AL +F K+ KS ++ DI  Y  +I   C   ++ ++   F
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
                 G     R Y  MI   CR+ +L+ A   F +M++ G  PD + Y  LI      
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITLA 608
                A  L + M   G  P +V+ + + 
Sbjct: 592 DDATTAAELIEEMKSSGF-PADVSTVKMV 619



 Score =  220 bits (560), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 216/427 (50%), Gaps = 2/427 (0%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G++ +AV ++  M   G  PN  T   V+ + C+ G    A  L  +M  R +  D+  Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
            +++   CK G++  A    + M  +GF  D  ++  +I  FC  G      +       
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
             + PN++ F+ +I+   K G +++A ++L+EM+ +G  PN  T+ +LIDG CK+   E+
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A ++ + L+ S+   P+++T+  +INGYC+ ++++    L   M  +G+I NT TY TL+
Sbjct: 387 AIQM-VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
            G C++G  E A  L   M      P+I +Y  ++DGLC  G +++A ++      + +E
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            D   Y I+I   C  + +  A  LF  +   G++ D  +Y  +I+  CR+  +S++++ 
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
           F +    G  P + TY  +I  +  + + T A +    M   G  P  ++   ++  +  
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG-FPADVSTVKMVINMLS 624

Query: 579 QSKLDEA 585
             +LD++
Sbjct: 625 SGELDKS 631



 Score =  214 bits (545), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 240/482 (49%), Gaps = 6/482 (1%)

Query: 153 RSFAEIGRLKEAVEMVF----EMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
           R F+ I + K+  E+V     +M ++G+  +  TL++++   C    + YA     ++  
Sbjct: 93  RLFSAIAKTKQ-YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMK 151

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G  PD+  +  ++   C    V EA + +  M++ G      +   +++  C  G  + 
Sbjct: 152 LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A+    +  + G +PN + +  ++  +CK G    A E+L +M  +  K +   ++ +ID
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
           GLCK G  + AF LF ++   +  K +++TY  +I G+C   + +    LL  M ++ + 
Sbjct: 272 GLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           PN  T++ LID   K G    A  L+  M + G +PN  TYN+++DG CK+ R++EA +M
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
           +      G + D +T+NILI+ +CK   I   L LF +M+  G+  +  +Y TL+  FC+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
             ++  ++  F+E V     P   +Y  ++ G C  G L  A++ F ++       D   
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLE 628
           Y  +I G+C  SK+D+A  L+ S+  KG+         +  E C+ D    A ++  ++ 
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570

Query: 629 KK 630
           ++
Sbjct: 571 EE 572



 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 7/318 (2%)

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
           K + A  L   M +   +P    +  L     K   +E    L   M  +G + +I T +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            +++  C+  ++  A+  +      G E D V +N L++  C +  + +AL L  +M + 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           G +P + +  TL+   C   ++S++ +  +  V  GF P + TY  ++   C+ G   +A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
           ++   +M +     D++ Y  +I GLCK   LD A  L++ M  KG     +T  TL   
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 611 YC---KIDDCCSAMVILDRLEKKLW--IRTATTLVRKLCSERKVGMAALFFHKLLDMDFH 665
           +C   + DD   A ++ D +++K+   + T + L+     E K+  A     +++     
Sbjct: 308 FCNAGRWDD--GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365

Query: 666 VNRVTLAAFMTACYESNK 683
            N +T  + +    + N+
Sbjct: 366 PNTITYNSLIDGFCKENR 383


>AT4G28010.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:13930379-13932493 FORWARD
           LENGTH=704
          Length = 704

 Score =  231 bits (588), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 235/477 (49%), Gaps = 44/477 (9%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           +AV ++ EM    ++P+  + N V++  CE   ++ A  L  EM   G      ++ +++
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219

Query: 223 VAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK 282
            A+CK G + EA  +L  M   G   D   +T +I  FC+ G   R    F +  + G  
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P  I + ++I G CK G +K+A E+ E M+ +G +PNVYT+T LIDGLC  G T++A +L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
            L L+  ++ +PN +TY  +IN  C+D  +  A  ++  MK++   P+  TY  L+ G C
Sbjct: 340 -LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398

Query: 403 KAGNFERAFDLMNLMSREG--FSPNICTYNAIVDGLCKKGRVQEA---YKMLKDGFHNGL 457
             G+ + A  L+ LM ++     P++ +YNA++ GLCK+ R+ +A   Y +L +    G 
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG- 457

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGI------------------------- 492
             D+VT NIL++   K  D+ +A+ L+ +++ S I                         
Sbjct: 458 --DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515

Query: 493 ----------QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYC 542
                     QP +  Y  L++  C+E  + ++   FEE  R    P   ++  MI G  
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575

Query: 543 REGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           + G++  A      MS  G  PD   Y  LI+   K   LDEA   +D M++ G  P
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score =  202 bits (514), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 231/467 (49%), Gaps = 38/467 (8%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ +F + G++ EA+  + EM   G+  +      +++  C+ G +D  + LF+E+  RG
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P + +Y  ++  +CK+G + EA +    M++RG   +  ++T +I   C  G    AL
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           +  +   +   +PN + +  +I  LCK G +  A E++E M  +  +P+  T+  L+ GL
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397

Query: 331 CKKGWTEKAFRL-FLKLVRSENNKPNVLTYTAMINGYCRDDKL----------------- 372
           C KG  ++A +L +L L  S    P+V++Y A+I+G C++++L                 
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457

Query: 373 ------------------NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
                             N+A  L  ++ +  ++ N++TYT +IDG CK G    A  L+
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
             M      P++  YN ++  LCK+G + +A+++ ++   +    D V++NI+I    K 
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
            DIK A +L   M+++G+ PD+ +Y+ LI  F +   + E+  FF++ V  GF P     
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637

Query: 535 TSMICGYC-REGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQS 580
            S++  YC  +G      +   ++ D   V D     T++  +C  S
Sbjct: 638 DSVL-KYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683



 Score =  185 bits (469), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/556 (25%), Positives = 243/556 (43%), Gaps = 41/556 (7%)

Query: 179 NTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL 238
           N  +L+ +++   +M    +A  +   M  RG   +  ++ +++   C+     +A   L
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
             M     + D  S+  +I  FCE     +AL   ++    G   +L+ +  +I+  CK 
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
           G + +A   L+EM   G + ++  +T+LI G C  G  ++   LF + V    + P  +T
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE-VLERGDSPCAIT 284

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y  +I G+C+  +L  A  +   M E+G+ PN  TYT LIDG C  G  + A  L+NLM 
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
            +   PN  TYN I++ LCK G V +A ++++         D +TYNIL+   C + D+ 
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404

Query: 479 QALALFSKMAK--SGIQPDIHSYTTLIAVFCREKRMSE-------------------SEM 517
           +A  L   M K  S   PD+ SY  LI   C+E R+ +                   + +
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464

Query: 518 FFEEAVRFG----------------FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
                ++ G                 +    TYT+MI G+C+ G L +A     +M    
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524

Query: 562 CVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSA- 620
             P    Y  L+S LCK+  LD+A  L++ M      P  V+   +     K  D  SA 
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584

Query: 621 --MVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTAC 678
             +V + R      + T + L+ +      +  A  FF K++D  F  +     + +  C
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644

Query: 679 YESNKYALVSDLSARI 694
               +   +++L  ++
Sbjct: 645 ISQGETDKLTELVKKL 660



 Score =  156 bits (395), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 168/365 (46%), Gaps = 3/365 (0%)

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A  ++ K  +     N ++ + ++E   +      AF +L  M+ +G+  NVY H  L+ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
           GLC+     KA  L L+ +R  +  P+V +Y  +I G+C   +L +A  L   MK  G  
Sbjct: 151 GLCRNLECGKAVSL-LREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCS 209

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
            +  T+  LID  CKAG  + A   +  M   G   ++  Y +++ G C  G +     +
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL 269

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
             +    G     +TYN LI   CK   +K+A  +F  M + G++P++++YT LI   C 
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
             +  E+       +     P   TY  +I   C++G +  A++    M      PD+I 
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKG--LIPCEVTRITLAYEYCKIDDCCSAMVILDR 626
           Y  L+ GLC +  LDEA  L   M++      P  ++   L +  CK +    A+ I D 
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449

Query: 627 LEKKL 631
           L +KL
Sbjct: 450 LVEKL 454



 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 3/271 (1%)

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           ++ N E AF     M       N  + + +++   +  +   A+ +L      G   +  
Sbjct: 84  RSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVY 143

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
            +NIL+   C+  +  +A++L  +M ++ + PD+ SY T+I  FC  K + ++     E 
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
              G   +  T+  +I  +C+ G +  A+ F   M   G   D + Y +LI G C   +L
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD-RLEKKLW--IRTATTL 639
           D  + L+D ++E+G  PC +T  TL   +CK+     A  I +  +E+ +   + T T L
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVT 670
           +  LC   K   A    + +++ D   N VT
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354



 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 84/177 (47%)

Query: 136 IGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGL 195
           I +  + +  +    M+  F + G L  A  ++ +M    + P+    N ++   C+ G 
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           +D A  LFEEM      PD  S+ +M+    K G++  A+  L  M   G   D  +++ 
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           +I+ F + G+   A+ +F K  D G +P+     S+++    +G   +  E+++++V
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661


>AT3G07290.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:2321740-2324382 REVERSE
           LENGTH=880
          Length = 880

 Score =  230 bits (586), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 251/493 (50%), Gaps = 10/493 (2%)

Query: 184 NLVMKIA-CEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVML 242
           +L+M +A  ++G + Y  Y    M A G       YR +V A CK G    A+ ++S +L
Sbjct: 165 SLLMSLAKLDLGFLAYVTY--RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222

Query: 243 DRGFLVDNASFTLIISEFCEKGFATR-ALRYFHKFS-DMGLKPNLINFTSMIEGLCKRGS 300
             GF++D+   T ++  FC +G   R AL+ F   S ++   PN ++++ +I GLC+ G 
Sbjct: 223 KIGFVLDSHIGTSLLLGFC-RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281

Query: 301 IKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYT 360
           +++AF + ++M  +G +P+  T+T LI  LC +G  +KAF LF +++     KPNV TYT
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI-PRGCKPNVHTYT 340

Query: 361 AMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE 420
            +I+G CRD K+  A  +  +M +  + P+  TY  LI+G+CK G    AF+L+ +M + 
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400

Query: 421 GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
              PN+ T+N +++GLC+ G+  +A  +LK    NGL  D V+YN+LI   C++  +  A
Sbjct: 401 ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTA 460

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
             L S M    I+PD  ++T +I  FC++ +   +  F    +R G    + T T++I G
Sbjct: 461 YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520

Query: 541 YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC 600
            C+ G    A+     +     +    +   ++  L K  K+ E   +   + + GL+P 
Sbjct: 521 VCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580

Query: 601 EVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTA---TTLVRKLCSERKVGMAALFFH 657
            VT  TL     +  D   +  IL+ ++    +      T ++  LC   +V  A     
Sbjct: 581 VVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLS 640

Query: 658 KLLDMDFHVNRVT 670
            + D     N VT
Sbjct: 641 AMQDSGVSPNHVT 653



 Score =  224 bits (571), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 206/399 (51%), Gaps = 1/399 (0%)

Query: 213 PDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRY 272
           P+S SY +++   C++G + EA      M ++G      ++T++I   C++G   +A   
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 273 FHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCK 332
           F +    G KPN+  +T +I+GLC+ G I++A  +  +MV     P+V T+ ALI+G CK
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383

Query: 333 KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
            G    AF L L ++     KPNV T+  ++ G CR  K  +A  LL RM + GL P+  
Sbjct: 384 DGRVVPAFEL-LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG 452
           +Y  LIDG C+ G+   A+ L++ M+     P+  T+ AI++  CK+G+   A   L   
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
              G+  D+VT   LI   CK    + AL +   + K  I    HS   ++ +  +  ++
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 562

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
            E      +  + G +P+  TYT+++ G  R G++T + +    M   GC+P+   Y  +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEY 611
           I+GLC+  +++EA  L  +M + G+ P  VT   +   Y
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661



 Score =  222 bits (566), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 212/431 (49%), Gaps = 1/431 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++    E+GRL+EA  +  +M  +G  P+T+T  +++K  C+ GL+D A  LF+EM  RG
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P+  +Y V++   C+ G + EA+     M+         ++  +I+ +C+ G    A 
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
                      KPN+  F  ++EGLC+ G   +A  +L+ M+  G  P++ ++  LIDGL
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C++G    A++L L  +   + +P+ LT+TA+IN +C+  K + A   LG M  +G+  +
Sbjct: 452 CREGHMNTAYKL-LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             T TTLIDG CK G    A  ++  + +        + N I+D L K  +V+E   ML 
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                GL    VTY  L+    +  DI  +  +   M  SG  P+++ YT +I   C+  
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           R+ E+E         G  P   TYT M+ GY   G L  A++    M + G   +   Y 
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYS 690

Query: 571 TLISGLCKQSK 581
           +L+ G     K
Sbjct: 691 SLLQGFVLSQK 701



 Score =  209 bits (531), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 224/438 (51%), Gaps = 4/438 (0%)

Query: 161 LKEAVEMVFEMHNQGMV--PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           L++A++ VF++ ++ +   PN+ + ++++   CE+G ++ A  L ++M  +G  P + +Y
Sbjct: 246 LRDALK-VFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
            V++ A C  G + +A      M+ RG   +  ++T++I   C  G    A     K   
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
             + P++I + ++I G CK G +  AFE+L  M  +  KPNV T   L++GLC+ G   K
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A  L LK +      P++++Y  +I+G CR+  +N A  LL  M    + P+  T+T +I
Sbjct: 425 AVHL-LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
           +  CK G  + A   + LM R+G S +  T   ++DG+CK G+ ++A  +L+      + 
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
               + N+++    K   +K+ LA+  K+ K G+ P + +YTTL+    R   ++ S   
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
            E     G +P    YT +I G C+ G +  A K    M D G  P+ + Y  ++ G   
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663

Query: 579 QSKLDEARGLYDSMIEKG 596
             KLD A     +M+E+G
Sbjct: 664 NGKLDRALETVRAMVERG 681



 Score =  186 bits (471), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 193/395 (48%)

Query: 245 GFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQA 304
           GF ++   ++ ++    +      A   + +    G    +I++ +++  LCK G  + A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214

Query: 305 FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN 364
              + +++  G+  + +  T+L+ G C+      A ++F  + +     PN ++Y+ +I+
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274

Query: 365 GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP 424
           G C   +L  A  L  +M E+G  P+T TYT LI   C  G  ++AF+L + M   G  P
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKP 334

Query: 425 NICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALF 484
           N+ TY  ++DGLC+ G+++EA  + +    + +    +TYN LI+ +CK   +  A  L 
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394

Query: 485 SKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCRE 544
           + M K   +P++ ++  L+   CR  +  ++    +  +  G  P   +Y  +I G CRE
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454

Query: 545 GNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTR 604
           G++  A K    M+     PD + +  +I+  CKQ K D A      M+ KG+   EVT 
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514

Query: 605 ITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTL 639
            TL    CK+     A+ IL+ L K   + T  +L
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL 549



 Score =  153 bits (386), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/516 (24%), Positives = 216/516 (41%), Gaps = 106/516 (20%)

Query: 128 YIVCATSLIGNGNLQKAHEVMQCMVR---------------SFAEIGRLKEAVEMVFEMH 172
           Y V    L  +G +++A+ V + MV+                + + GR+  A E++  M 
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398

Query: 173 NQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVL 232
            +   PN +T N +M+  C +G    A +L + M   G+ PD  SY V++   C+ G++ 
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458

Query: 233 EADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMI 292
            A K LS M       D  +FT II+ FC++G A  A  +       G+  + +  T++I
Sbjct: 459 TAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518

Query: 293 EGLCKRGSIKQAFEMLEEMV---------------------CQ--------------GWK 317
           +G+CK G  + A  +LE +V                     C+              G  
Sbjct: 519 DGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLV 578

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
           P+V T+T L+DGL + G    +FR+ L+L++     PNV  YT +ING C+  ++  AE 
Sbjct: 579 PSVVTYTTLVDGLIRSGDITGSFRI-LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG-- 435
           LL  M++ G+ PN  TYT ++ G+   G  +RA + +  M   G+  N   Y++++ G  
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697

Query: 436 ---------------------------------------------------LCKKGRVQE 444
                                                              LCK+GR  E
Sbjct: 698 LSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDE 757

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
           +  ++++    G+  +K   +I++  +C +    + + L + + KSG  P   S+  +I 
Sbjct: 758 SNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQ 816

Query: 505 VFCREKRMSES-EMFFEEAVRFGFIPTKRTYTSMIC 539
              +E     + E+  E     G +      T + C
Sbjct: 817 GLKKEGDAERARELVMELLTSNGVVEKSGVLTYVEC 852


>AT3G16710.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:5690020-5691543 FORWARD
           LENGTH=507
          Length = 507

 Score =  228 bits (581), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 248/549 (45%), Gaps = 61/549 (11%)

Query: 59  ALVCDSFHQHTH---MRVSPPRLHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFFHWA 115
           A +   FH H+H   +++S PR                         A S+    F  W 
Sbjct: 10  ASIVKGFHLHSHRHRLQISNPR------------------------TAASLSLCGFCFWI 45

Query: 116 IGYSRFRHFMRLYIVCATSLIGNG--NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHN 173
             +S +R  +R           NG  NLQ                    +A+++   M +
Sbjct: 46  RAFSSYRKILR-----------NGLHNLQ------------------FNDALDLFTRMVH 76

Query: 174 QGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLE 233
              +P+      ++ +  +M   D    LFE+M   G+ P   +  +++   C       
Sbjct: 77  SRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCR 136

Query: 234 ADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIE 293
           A  +L  M+  GF  D  +FT +++ +C       A+  F +   MG KPN++ +T++I 
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196

Query: 294 GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG-WTEKAFRLFLKLVRSENN 352
            LCK   +  A E+  +M   G +PNV T+ AL+ GLC+ G W + A+   L+ +     
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW--LLRDMMKRRI 254

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           +PNV+T+TA+I+ + +  KL  A+ L   M +  + P+  TY +LI+G C  G  + A  
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           +  LM R G  PN   Y  ++ G CK  RV++  K+  +    G+ A+ +TY +LI  +C
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
                  A  +F++M+     PDI +Y  L+   C   ++ ++ M FE   +        
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           TYT +I G C+ G +  A   F  +   G  P+ I Y T+ISG C++  + EA  L+  M
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494

Query: 593 IEKGLIPCE 601
            E G +P E
Sbjct: 495 KEDGFLPNE 503



 Score =  174 bits (441), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 190/398 (47%), Gaps = 4/398 (1%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P++I+FT ++  + K         + E+M   G  P + T   ++  +C      +A   
Sbjct: 81  PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRA-SC 139

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
           FL  +     +P+++T+T+++NGYC  +++  A  L  ++   G  PN  TYTTLI   C
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           K  +   A +L N M   G  PN+ TYNA+V GLC+ GR  +A  +L+D     +E + +
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           T+  LI    K   + +A  L++ M +  + PD+ +Y +LI   C    + E+   F   
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
            R G  P +  YT++I G+C+   +   +K F+ MS  G V ++I Y  LI G C   + 
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK---LWIRTATTL 639
           D A+ +++ M  +   P   T   L    C       A++I + + K+   + I T T +
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
           ++ +C   KV  A   F  L       N +T    ++ 
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477



 Score =  159 bits (401), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 4/370 (1%)

Query: 304 AFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMI 363
           A ++   MV     P++   T L+  + K    +    LF ++ +     P + T   ++
Sbjct: 67  ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM-QILGIPPLLCTCNIVM 125

Query: 364 NGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS 423
           +  C   +  RA   LG+M + G  P+  T+T+L++G+C     E A  L + +   GF 
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185

Query: 424 PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALAL 483
           PN+ TY  ++  LCK   +  A ++      NG   + VTYN L++  C+      A  L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245

Query: 484 FSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCR 543
              M K  I+P++ ++T LI  F +  ++ E++  +   ++    P   TY S+I G C 
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305

Query: 544 EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
            G L  A + F+ M  +GC P+ + Y TLI G CK  ++++   ++  M +KG++   +T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365

Query: 604 RITLAYEYCKIDDCCSAMVILDRLEKKLW---IRTATTLVRKLCSERKVGMAALFFHKLL 660
              L   YC +     A  + +++  +     IRT   L+  LC   KV  A + F  + 
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425

Query: 661 DMDFHVNRVT 670
             +  +N VT
Sbjct: 426 KREMDINIVT 435



 Score =  111 bits (278), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 140/340 (41%), Gaps = 38/340 (11%)

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           +Y  ++     + + N A  L  RM     +P+   +T L+    K   ++    L   M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
              G  P +CT N ++  +C   +   A   L      G E D VT+  L++ +C    I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
           + A+ALF ++   G +P++ +YTTLI   C+ + ++ +   F +    G  P   TY ++
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 538 ICGYC-----------------------------------REGNLTMAIKFFHRMSDHGC 562
           + G C                                   + G L  A + ++ M     
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMV 622
            PD   YG+LI+GLC    LDEAR ++  M   G  P EV   TL + +CK       M 
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 623 ILDRLEKKLWIR---TATTLVRKLCSERKVGMAALFFHKL 659
           I   + +K  +    T T L++  C   +  +A   F+++
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389


>AT5G55840.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfamily
            protein | chr5:22598038-22601688 FORWARD LENGTH=1136
          Length = 1136

 Score =  227 bits (579), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/599 (26%), Positives = 262/599 (43%), Gaps = 75/599 (12%)

Query: 151  MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
            ++  F ++GR K A E+V  ++  G+ PN    + ++   C MG +  A  ++E M   G
Sbjct: 484  LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543

Query: 211  VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
               D  ++ V+V + CK G V EA++++  M   G L +  SF  +I+ +   G   +A 
Sbjct: 544  HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 603

Query: 271  RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLE--------------------- 309
              F + + +G  P    + S+++GLCK G +++A + L+                     
Sbjct: 604  SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663

Query: 310  --------------EMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN--- 352
                          EMV +   P+ YT+T+LI GLC+KG T  A  LF K   +  N   
Sbjct: 664  CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLP 722

Query: 353  ---------------------------------KPNVLTYTAMINGYCRDDKLNRAEMLL 379
                                              P+++T  AMI+GY R  K+ +   LL
Sbjct: 723  NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 782

Query: 380  GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
              M  Q   PN  TY  L+ G+ K  +   +F L   +   G  P+  T +++V G+C+ 
Sbjct: 783  PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 842

Query: 440  GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
              ++   K+LK     G+E D+ T+N+LIS+ C   +I  A  L   M   GI  D  + 
Sbjct: 843  NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTC 902

Query: 500  TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
              +++V  R  R  ES M   E  + G  P  R Y  +I G CR G++  A      M  
Sbjct: 903  DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 962

Query: 560  HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCS 619
            H   P ++A   ++  L K  K DEA  L   M++  L+P   +  TL +  CK  +   
Sbjct: 963  HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 1022

Query: 620  AM---VILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
            A+   V++     KL + +   L+  LC++  + +A   + ++    F  N  T  A +
Sbjct: 1023 ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081



 Score =  224 bits (570), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 234/510 (45%), Gaps = 4/510 (0%)

Query: 179 NTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL 238
           N    ++++++    G++  +  +F  M   G +P   +   ++ +  K G  +    +L
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
             ML R    D A+F ++I+  C +G   ++     K    G  P ++ + +++   CK+
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
           G  K A E+L+ M  +G   +V T+  LI  LC+     K + L L+ +R     PN +T
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY-LLLRDMRKRMIHPNEVT 340

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y  +ING+  + K+  A  LL  M   GL PN  T+  LIDGH   GNF+ A  +  +M 
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
            +G +P+  +Y  ++DGLCK      A         NG+   ++TY  +I   CK   + 
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
           +A+ L ++M+K GI PDI +Y+ LI  FC+  R   ++       R G  P    Y+++I
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
              CR G L  AI+ +  M   G   D   +  L++ LCK  K+ EA      M   G++
Sbjct: 521 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580

Query: 599 PCEVTRITLAYEYCKIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALF 655
           P  V+   L   Y    +   A  + D + K        T  +L++ LC    +  A  F
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640

Query: 656 FHKLLDMDFHVNRVTLAAFMTACYESNKYA 685
              L  +   V+ V     +TA  +S   A
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670



 Score =  125 bits (315), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 173/402 (43%), Gaps = 36/402 (8%)

Query: 139  GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
            GN+     +  C V    + G+ K  +    +M N G  P+  T N ++     MG ++ 
Sbjct: 718  GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 777

Query: 199  AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
               L  EM  +   P+  +Y +++  Y K       D   S +L R  +++         
Sbjct: 778  TNDLLPEMGNQNGGPNLTTYNILLHGYSK-----RKDVSTSFLLYRSIILN--------- 823

Query: 259  EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
                                 G+ P+ +   S++ G+C+   ++   ++L+  +C+G + 
Sbjct: 824  ---------------------GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 862

Query: 319  NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
            + YT   LI   C  G    AF L +K++ S     +  T  AM++   R+ +   + M+
Sbjct: 863  DRYTFNMLISKCCANGEINWAFDL-VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 921

Query: 379  LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
            L  M +QG+ P +  Y  LI+G C+ G+ + AF +   M      P     +A+V  L K
Sbjct: 922  LHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 981

Query: 439  KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
             G+  EA  +L+      L     ++  L+   CK  ++ +AL L   M+  G++ D+ S
Sbjct: 982  CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1041

Query: 499  YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
            Y  LI   C +  M+ +   +EE    GF+    TY ++I G
Sbjct: 1042 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083



 Score =  110 bits (275), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 143/322 (44%), Gaps = 38/322 (11%)

Query: 151  MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
            M+  ++ +G++++  +++ EM NQ   PN  T N+++    +   V  +  L+  +   G
Sbjct: 765  MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 824

Query: 211  VHPDSASYRVMVVAYCKMGNVLEAD-KWLSVMLDRGFLVDNASFTLIISEFCEKG----- 264
            + PD  +   +V+  C+  N+LE   K L   + RG  VD  +F ++IS+ C  G     
Sbjct: 825  ILPDKLTCHSLVLGICE-SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 883

Query: 265  ------------------------FATRALRY------FHKFSDMGLKPNLINFTSMIEG 294
                                       R  R+       H+ S  G+ P    +  +I G
Sbjct: 884  FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943

Query: 295  LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
            LC+ G IK AF + EEM+     P     +A++  L K G  ++A  L L+ +      P
Sbjct: 944  LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA-TLLLRFMLKMKLVP 1002

Query: 355  NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
             + ++T +++  C++  +  A  L   M   GL  +  +Y  LI G C  G+   AF+L 
Sbjct: 1003 TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1062

Query: 415  NLMSREGFSPNICTYNAIVDGL 436
              M  +GF  N  TY A++ GL
Sbjct: 1063 EEMKGDGFLANATTYKALIRGL 1084



 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 24/276 (8%)

Query: 81   SIDPDSLT-HEQAVTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNG 139
             I PD LT H   +    S     G  +  +F    +   R+   M +   CA     NG
Sbjct: 824  GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA-----NG 878

Query: 140  NLQKAHEVMQ---------------CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLN 184
             +  A ++++                MV       R +E+  ++ EM  QG+ P ++   
Sbjct: 879  EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 938

Query: 185  LVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDR 244
             ++   C +G +  A  + EEM A  + P + +   MV A  K G   EA   L  ML  
Sbjct: 939  GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 998

Query: 245  GFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQA 304
              +   ASFT ++   C+ G    AL      S+ GLK +L+++  +I GLC +G +  A
Sbjct: 999  KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1058

Query: 305  FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF 340
            FE+ EEM   G+  N  T+ ALI GL  +   E AF
Sbjct: 1059 FELYEEMKGDGFLANATTYKALIRGLLAR---ETAF 1091



 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 3/195 (1%)

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS 558
           Y  LI V+ RE  + +S   F     +GF P+  T  +++    + G       F   M 
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225

Query: 559 DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCC 618
                PD   +  LI+ LC +   +++  L   M + G  P  VT  T+ + YCK     
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285

Query: 619 SAMVILDRLEKK---LWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
           +A+ +LD ++ K     + T   L+  LC   ++    L    +     H N VT    +
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345

Query: 676 TACYESNKYALVSDL 690
                  K  + S L
Sbjct: 346 NGFSNEGKVLIASQL 360



 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 1/167 (0%)

Query: 151  MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
            ++     +G +K A  +  EM    + P     + +++   + G  D A  L   M    
Sbjct: 940  LINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 999

Query: 211  VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
            + P  AS+  ++   CK GNV+EA +   VM + G  +D  S+ ++I+  C KG    A 
Sbjct: 1000 LVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAF 1059

Query: 271  RYFHKFSDMGLKPNLINFTSMIEGLCKR-GSIKQAFEMLEEMVCQGW 316
              + +    G   N   + ++I GL  R  +   A  +L++++ +G+
Sbjct: 1060 ELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1106


>AT1G63080.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:23388884-23390728 REVERSE
           LENGTH=614
          Length = 614

 Score =  227 bits (578), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 247/499 (49%), Gaps = 5/499 (1%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
           NL   + ++ C+ R      +L  A+ ++ +M   G  P+  TLN ++   C    +  A
Sbjct: 99  NLYTYNIMINCLCRR----SQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
             L ++M   G  PD+ ++  +V    +     EA   +  M+ +G   D  ++  +I+ 
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
            C++G    AL   +K     ++ +++ ++++I+ LCK   +  A  +  EM  +G +P+
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
           V+T+++LI  LC  G    A RL   ++  + N PNV+T+ ++I+ + ++ KL  AE L 
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKIN-PNVVTFNSLIDAFAKEGKLIEAEKLF 333

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
             M ++ + PN  TY +LI+G C     + A  +  LM  +   P++ TYN +++G CK 
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
            +V +  ++ +D    GL  + VTY  LI    + +D   A  +F +M   G+ P+I +Y
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
            TL+   C+  ++ ++ + FE   +    P   TY  M  G C+ G +      F  +S 
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513

Query: 560 HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCS 619
            G  PD IAY T+ISG CK+   +EA  L+  M E G +P   T  TL   + +  D  +
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573

Query: 620 AMVILDRLEKKLWIRTATT 638
           +  ++  +    +   A+T
Sbjct: 574 SAELIKEMRSCRFAGDAST 592



 Score =  216 bits (550), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 224/435 (51%), Gaps = 2/435 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V    +  +  EAV +V  M  +G  P+  T   V+   C+ G  D A  L  +M    
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +  D   Y  ++ + CK  +V +A    + M ++G   D  +++ +IS  C  G  + A 
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           R      +  + PN++ F S+I+   K G + +A ++ +EM+ +   PN+ T+ +LI+G 
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C     ++A ++F  +V S++  P+V+TY  +ING+C+  K+     L   M  +GL+ N
Sbjct: 356 CMHDRLDEAQQIFTLMV-SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
           T TYTTLI G  +A + + A  +   M  +G  PNI TYN ++DGLCK G++++A  + +
Sbjct: 415 TVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
               + +E D  TYNI+    CK   ++    LF  ++  G++PD+ +Y T+I+ FC++ 
Sbjct: 475 YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG 534

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
              E+   F +    G +P   TY ++I  + R+G+   + +    M       D+  YG
Sbjct: 535 LKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 594

Query: 571 TLISGLCKQSKLDEA 585
            L++ +    +LD+ 
Sbjct: 595 -LVTDMLHDGRLDKG 608



 Score =  213 bits (541), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 231/454 (50%), Gaps = 1/454 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +L EAV++  EM      P+    + ++    +M   D      E+M   GV  +  +Y 
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +M+   C+   +  A   L  M+  G+     +   +++ FC     + A+    +  +M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G +P+ + FT+++ GL +     +A  ++E MV +G +P++ T+ A+I+GLCK+G  + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             L  K+ + +  + +V+ Y+ +I+  C+   ++ A  L   M  +G+ P+  TY++LI 
Sbjct: 225 LNLLNKMEKGK-IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
             C  G +  A  L++ M     +PN+ T+N+++D   K+G++ EA K+  +     ++ 
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           + VTYN LI+  C    + +A  +F+ M      PD+ +Y TLI  FC+ K++ +    F
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            +  R G +    TYT++I G+ +  +   A   F +M   G  P+ + Y TL+ GLCK 
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
            KL++A  +++ + +  + P   T   ++   CK
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497



 Score =  204 bits (519), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 225/457 (49%), Gaps = 4/457 (0%)

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           +D A  LF EM      P    +  ++ A  KM        +   M   G   +  ++ +
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           +I+  C +   + AL    K   +G  P+++   S++ G C    I +A  ++++MV  G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
           ++P+  T T L+ GL +     +A  L  ++V  +  +P+++TY A+ING C+  + + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMV-VKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
             LL +M++  +  +   Y+T+ID  CK  + + A +L   M  +G  P++ TY++++  
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
           LC  GR  +A ++L D     +  + VT+N LI    K+  + +A  LF +M +  I P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
           I +Y +LI  FC   R+ E++  F   V    +P   TY ++I G+C+   +   ++ F 
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKID 615
            MS  G V +++ Y TLI G  + S  D A+ ++  M+  G+ P  +T  TL    CK  
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464

Query: 616 DCCSAMVILDRLEKKLW---IRTATTLVRKLCSERKV 649
               AMV+ + L+K      I T   +   +C   KV
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501



 Score =  195 bits (495), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 199/404 (49%), Gaps = 4/404 (0%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P+++ F+ ++  + K           E+M   G   N+YT+  +I+ LC++     A  +
Sbjct: 63  PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
             K+++     P+++T  +++NG+C  ++++ A  L+ +M E G  P+T T+TTL+ G  
Sbjct: 123 LGKMMKL-GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           +      A  L+  M  +G  P++ TY A+++GLCK+G    A  +L       +EAD V
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
            Y+ +I   CK   +  AL LF++M   GI+PD+ +Y++LI+  C   R S++     + 
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
           +     P   T+ S+I  + +EG L  A K F  M      P+ + Y +LI+G C   +L
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR---TATTL 639
           DEA+ ++  M+ K  +P  VT  TL   +CK       M +   + ++  +    T TTL
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
           +           A + F +++    H N +T    +    ++ K
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465



 Score =  171 bits (432), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 176/361 (48%), Gaps = 1/361 (0%)

Query: 139 GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           G ++    +   ++ S  +   + +A+ +  EM N+G+ P+  T + ++   C  G    
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
           A  L  +M  R ++P+  ++  ++ A+ K G ++EA+K    M+ R    +  ++  +I+
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
            FC       A + F         P+++ + ++I G CK   +    E+  +M  +G   
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
           N  T+T LI G  +    + A  +F ++V S+   PN++TY  +++G C++ KL +A ++
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMV-SDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
              +++  + P+  TY  + +G CKAG  E  +DL   +S +G  P++  YN ++ G CK
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
           KG  +EAY +      +G   D  TYN LI  H +  D   +  L  +M       D  +
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592

Query: 499 Y 499
           Y
Sbjct: 593 Y 593



 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 3/310 (0%)

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
           KL+ A  L G M +    P+   ++ L+    K   F+        M   G S N+ TYN
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            +++ LC++ ++  A  +L      G     VT N L++  C    I +A+AL  +M + 
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           G QPD  ++TTL+    +  + SE+    E  V  G  P   TY ++I G C+ G   +A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
           +   ++M       D + Y T+I  LCK   +D+A  L+  M  KG+ P   T  +L   
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 611 YCKIDDCCSAMVIL-DRLEKKL--WIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVN 667
            C       A  +L D LE+K+   + T  +L+     E K+  A   F +++      N
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 668 RVTLAAFMTA 677
            VT  + +  
Sbjct: 345 IVTYNSLING 354


>AT1G63130.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:23412854-23414746 FORWARD
           LENGTH=630
          Length = 630

 Score =  224 bits (572), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 244/502 (48%), Gaps = 3/502 (0%)

Query: 140 NLQKAHEVM--QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVD 197
           NL  +H +     ++  F    +L  A+ ++ +M   G  P+  TLN ++   C    + 
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168

Query: 198 YAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLII 257
            A  L  +M   G  PDS ++  ++    +     EA   +  M+ +G   D  ++ +++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228

Query: 258 SEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
           +  C++G    AL    K     ++P ++ + ++I+ LC   ++  A  +  EM  +G +
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
           PNV T+ +LI  LC  G    A RL   ++  + N PNV+T++A+I+ + ++ KL  AE 
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEK 347

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
           L   M ++ + P+  TY++LI+G C     + A  +  LM  +   PN+ TYN ++ G C
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407

Query: 438 KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIH 497
           K  RV E  ++ ++    GL  + VTY  LI    +  +   A  +F +M   G+ PDI 
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467

Query: 498 SYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
           +Y+ L+   C   ++  + + FE   R    P   TY  MI G C+ G +      F  +
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDC 617
           S  G  P+ + Y T++SG C++   +EA  L+  M E+G +P   T  TL   + +  D 
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDK 587

Query: 618 CSAMVILDRLEKKLWIRTATTL 639
            ++  ++  +    ++  A+T+
Sbjct: 588 AASAELIREMRSCRFVGDASTI 609



 Score =  219 bits (559), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 226/426 (53%), Gaps = 2/426 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R  EAV +V  M  +G  P+  T  +V+   C+ G +D A  L ++M    + P    Y 
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            ++ A C   NV +A    + M ++G   +  ++  +I   C  G  + A R      + 
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
            + PN++ F+++I+   K G + +A ++ +EM+ +   P+++T+++LI+G C     ++A
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             +F +L+ S++  PNV+TY  +I G+C+  +++    L   M ++GL+ NT TYTTLI 
Sbjct: 381 KHMF-ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G  +A   + A  +   M  +G  P+I TY+ ++DGLC  G+V+ A  + +    + +E 
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D  TYNI+I   CK   ++    LF  ++  G++P++ +YTT+++ FCR+    E++  F
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            E    G +P   TY ++I  + R+G+   + +    M     V D+   G L++ +   
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHD 618

Query: 580 SKLDEA 585
            +LD++
Sbjct: 619 GRLDKS 624



 Score =  213 bits (543), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 226/463 (48%), Gaps = 1/463 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ + A++ +    + +  +M N G+  N  T ++++   C    +  A  +  +M   G
Sbjct: 87  LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD  +   ++  +C    + +A   +  M++ G+  D+ +F  +I        A+ A+
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +    G +P+L+ +  ++ GLCKRG I  A  +L++M     +P V  +  +ID L
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C       A  LF ++  ++  +PNV+TY ++I   C   + + A  LL  M E+ + PN
Sbjct: 267 CNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             T++ LID   K G    A  L + M +    P+I TY+++++G C   R+ EA  M +
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                    + VTYN LI   CK   + + + LF +M++ G+  +  +YTTLI  F + +
Sbjct: 386 LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
               +++ F++ V  G +P   TY+ ++ G C  G +  A+  F  +      PD   Y 
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
            +I G+CK  K+++   L+ S+  KG+ P  VT  T+   +C+
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548



 Score =  213 bits (542), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 231/485 (47%), Gaps = 4/485 (0%)

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           +D A  LF +M      P    +  ++ A  KM            M + G   +  ++++
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           +I+ FC +   + AL    K   +G +P+++   S++ G C    I  A  ++ +MV  G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
           ++P+ +T   LI GL +     +A  L  ++V  +  +P+++TY  ++NG C+   ++ A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
             LL +M++  + P    Y T+ID  C   N   A +L   M  +G  PN+ TYN+++  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
           LC  GR  +A ++L D     +  + VT++ LI    K+  + +A  L+ +M K  I PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
           I +Y++LI  FC   R+ E++  FE  +     P   TY ++I G+C+   +   ++ F 
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKID 615
            MS  G V +++ Y TLI G  +  + D A+ ++  M+  G++P  +T   L    C   
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480

Query: 616 DCCSAMVILDRLEKKLW---IRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLA 672
              +A+V+ + L++      I T   ++  +C   KV      F  L       N VT  
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540

Query: 673 AFMTA 677
             M+ 
Sbjct: 541 TMMSG 545



 Score =  173 bits (438), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 174/349 (49%), Gaps = 1/349 (0%)

Query: 139 GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           G ++    +   ++ +      + +A+ +  EM N+G+ PN  T N +++  C  G    
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
           A  L  +M  R ++P+  ++  ++ A+ K G ++EA+K    M+ R    D  +++ +I+
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
            FC       A   F         PN++ + ++I+G CK   + +  E+  EM  +G   
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
           N  T+T LI G  +    + A  +F ++V S+   P+++TY+ +++G C + K+  A ++
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMV-SDGVLPDIMTYSILLDGLCNNGKVETALVV 488

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
              ++   + P+  TY  +I+G CKAG  E  +DL   +S +G  PN+ TY  ++ G C+
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM 487
           KG  +EA  + ++    G   D  TYN LI  H +  D   +  L  +M
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597



 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 135/295 (45%), Gaps = 3/295 (1%)

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
           D KL+ A  L G M +    P+   ++ L+    K   F+    L   M   G S N+ T
Sbjct: 59  DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           Y+ +++  C++ ++  A  +L      G E D VT N L++  C    I  A++L  +M 
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
           + G QPD  ++ TLI    R  R SE+    +  V  G  P   TY  ++ G C+ G++ 
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
           +A+    +M      P  + Y T+I  LC    +++A  L+  M  KG+ P  VT  +L 
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298

Query: 609 YEYCKIDDCCSAMVIL-DRLEKKL--WIRTATTLVRKLCSERKVGMAALFFHKLL 660
              C       A  +L D +E+K+   + T + L+     E K+  A   + +++
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353



 Score =  113 bits (282), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 135/281 (48%), Gaps = 5/281 (1%)

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
            + A +L   M +    P+I  ++ ++  + K  +      + +   + G+  +  TY+I
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           LI+  C+++ +  ALA+ +KM K G +PDI +  +L+  FC   R+S++     + V  G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
           + P   T+ ++I G  R    + A+    RM   GC PD + YG +++GLCK+  +D A 
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 587 GLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR----TATTLVRK 642
            L   M +  + P  V   T+    C   +   A+ +   ++ K  IR    T  +L+R 
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRC 300

Query: 643 LCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
           LC+  +   A+     +++   + N VT +A + A  +  K
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341


>AT1G62910.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:23299060-23300958 FORWARD
           LENGTH=632
          Length = 632

 Score =  224 bits (572), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 229/456 (50%), Gaps = 1/456 (0%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           +  F    +L  A+ ++ +M   G  P+  TL+ ++   C    +  A  L ++M   G 
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            PD+ ++  ++          EA   +  M+ RG   D  ++  +++  C++G    AL 
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
              K     ++ +++ + ++I+GLCK   +  A  +  EM  +G +P+V+T+++LI  LC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
             G    A RL   ++  + N PNV+T++A+I+ + ++ KL  AE L   M ++ + P+ 
Sbjct: 305 NYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
            TY++LI+G C     + A  +  LM  +   PN+ TY+ ++ G CK  RV+E  ++ ++
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
               GL  + VTY  LI    +  D   A  +F +M   G+ P+I +Y  L+   C+  +
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
           ++++ + FE   R    P   TY  MI G C+ G +    + F  +S  G  P+ IAY T
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           +ISG C++   +EA  L   M E G +P   T  TL
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579



 Score =  218 bits (554), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 226/426 (53%), Gaps = 2/426 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +  EAV +V +M  +G  P+  T   V+   C+ G +D A  L ++M    +  D   Y 
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            ++   CK  ++ +A    + M ++G   D  +++ +IS  C  G  + A R      + 
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
            + PN++ F+++I+   K G + +A ++ +EM+ +   P+++T+++LI+G C     ++A
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             +F +L+ S++  PNV+TY+ +I G+C+  ++     L   M ++GL+ NT TYTTLI 
Sbjct: 383 KHMF-ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G  +A + + A  +   M   G  PNI TYN ++DGLCK G++ +A  + +    + +E 
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D  TYNI+I   CK   ++    LF  ++  G+ P++ +Y T+I+ FCR+    E++   
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
           ++    G +P   TY ++I    R+G+   + +    M   G   D+   G L++ +   
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHD 620

Query: 580 SKLDEA 585
            +LD++
Sbjct: 621 GRLDKS 626



 Score =  216 bits (550), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 209/426 (49%), Gaps = 1/426 (0%)

Query: 148 MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS 207
           +  ++  +    R+ +AV +V +M   G  P+T T   ++           A  L ++M 
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
            RG  PD  +Y  +V   CK G++  A   L  M       D   +  II   C+     
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
            AL  F +  + G++P++  ++S+I  LC  G    A  +L +M+ +   PNV T +ALI
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           D   K+G   +A +L+ ++++   + P++ TY+++ING+C  D+L+ A+ +   M  +  
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            PN  TY+TLI G CKA   E   +L   MS+ G   N  TY  ++ G  +      A  
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           + K     G+  + +TYNIL+   CK   + +A+ +F  + +S ++PDI++Y  +I   C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
           +  ++ +    F      G  P    Y +MI G+CR+G+   A     +M + G +P+S 
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574

Query: 568 AYGTLI 573
            Y TLI
Sbjct: 575 TYNTLI 580



 Score =  214 bits (546), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 226/457 (49%), Gaps = 4/457 (0%)

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           VD A  LF +M      P    +  ++ A  KM            M   G   D  ++++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
            I+ FC +   + AL    K   +G +P+++  +S++ G C    I  A  ++++MV  G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
           +KP+ +T T LI GL       +A  L  ++V+    +P+++TY  ++NG C+   ++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
             LL +M++  +  +   Y T+IDG CK  + + A +L   M  +G  P++ TY++++  
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
           LC  GR  +A ++L D     +  + VT++ LI    K+  + +A  L+ +M K  I PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
           I +Y++LI  FC   R+ E++  FE  +     P   TY+++I G+C+   +   ++ F 
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKID 615
            MS  G V +++ Y TLI G  +    D A+ ++  M+  G+ P  +T   L    CK  
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482

Query: 616 DCCSAMVILDRLEKKLW---IRTATTLVRKLCSERKV 649
               AMV+ + L++      I T   ++  +C   KV
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519



 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 229/463 (49%), Gaps = 1/463 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ + A++ + +  + +  +M   G+  +  T ++ +   C    +  A  +  +M   G
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD  +   ++  YC    + +A   +  M++ G+  D  +FT +I        A+ A+
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +    G +P+L+ + +++ GLCKRG I  A  +L++M     + +V  +  +IDGL
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK    + A  LF ++  ++  +P+V TY+++I+  C   + + A  LL  M E+ + PN
Sbjct: 269 CKYKHMDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             T++ LID   K G    A  L + M +    P+I TY+++++G C   R+ EA  M +
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                    + VTY+ LI   CK   +++ + LF +M++ G+  +  +YTTLI  F + +
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
               ++M F++ V  G  P   TY  ++ G C+ G L  A+  F  +      PD   Y 
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
            +I G+CK  K+++   L+ ++  KG+ P  +   T+   +C+
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550



 Score =  206 bits (523), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 240/490 (48%), Gaps = 2/490 (0%)

Query: 111 FFHWAI-GYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVF 169
           F HW + G          + +C +          + +  + +    ++I ++ +AV++  
Sbjct: 13  FVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFG 72

Query: 170 EMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMG 229
           +M      P+    N ++    +M   +    L E+M   G+  D  +Y + +  +C+  
Sbjct: 73  DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132

Query: 230 NVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFT 289
            +  A   L+ M+  G+  D  + + +++ +C     + A+    +  +MG KP+   FT
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192

Query: 290 SMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
           ++I GL       +A  ++++MV +G +P++ T+  +++GLCK+G  + A  L  K+ + 
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
           +  + +V+ Y  +I+G C+   ++ A  L   M  +G+ P+  TY++LI   C  G +  
Sbjct: 253 K-IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311

Query: 410 AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILIS 469
           A  L++ M     +PN+ T++A++D   K+G++ EA K+  +     ++ D  TY+ LI+
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371

Query: 470 EHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
             C    + +A  +F  M      P++ +Y+TLI  FC+ KR+ E    F E  + G + 
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431

Query: 530 TKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLY 589
              TYT++I G+ +  +   A   F +M   G  P+ + Y  L+ GLCK  KL +A  ++
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491

Query: 590 DSMIEKGLIP 599
           + +    + P
Sbjct: 492 EYLQRSTMEP 501



 Score =  205 bits (522), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 204/406 (50%), Gaps = 4/406 (0%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P+++ F  ++  + K    +    + E+M   G   ++YT++  I+  C++     A  +
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
             K+++    +P+++T ++++NGYC   +++ A  L+ +M E G  P+T T+TTLI G  
Sbjct: 141 LAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
                  A  L++ M + G  P++ TY  +V+GLCK+G +  A  +LK      +EAD V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
            YN +I   CK   +  AL LF++M   GI+PD+ +Y++LI+  C   R S++     + 
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
           +     P   T++++I  + +EG L  A K +  M      PD   Y +LI+G C   +L
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR---TATTL 639
           DEA+ +++ MI K   P  VT  TL   +CK       M +   + ++  +    T TTL
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYA 685
           +      R    A + F +++ +  H N +T    +    ++ K A
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485



 Score =  175 bits (443), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 187/377 (49%), Gaps = 2/377 (0%)

Query: 139 GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           G ++    +   ++    +   + +A+ +  EM N+G+ P+  T + ++   C  G    
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
           A  L  +M  R ++P+  ++  ++ A+ K G ++EA+K    M+ R    D  +++ +I+
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
            FC       A   F         PN++ ++++I+G CK   +++  E+  EM  +G   
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
           N  T+T LI G  +    + A  +F ++V S    PN+LTY  +++G C++ KL +A ++
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKLAKAMVV 490

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
              ++   + P+  TY  +I+G CKAG  E  ++L   +S +G SPN+  YN ++ G C+
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
           KG  +EA  +LK    +G   +  TYN LI    +  D + +  L  +M   G   D  S
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD-AS 609

Query: 499 YTTLIAVFCREKRMSES 515
              L+     + R+ +S
Sbjct: 610 TIGLVTNMLHDGRLDKS 626



 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 3/293 (1%)

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
           K++ A  L G M +    P+   +  L+    K   FE    L   M   G S ++ TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
             ++  C++ ++  A  +L      G E D VT + L++ +C    I  A+AL  +M + 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           G +PD  ++TTLI       + SE+    ++ V+ G  P   TY +++ G C+ G++ +A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
           +    +M       D + Y T+I GLCK   +D+A  L+  M  KG+ P   T  +L   
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 611 YCKIDDCCSAMVIL-DRLEKKL--WIRTATTLVRKLCSERKVGMAALFFHKLL 660
            C       A  +L D +E+K+   + T + L+     E K+  A   + +++
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355


>AT4G19440.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:10602006-10604483 REVERSE
           LENGTH=825
          Length = 825

 Score =  224 bits (570), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 222/463 (47%), Gaps = 1/463 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V+      R+ +A  ++ EM  +G  PN    N ++    E G ++ A  + + M ++G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +   S++Y  ++  YCK G    A++ L  ML  GF V+  SFT +I   C       AL
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           R+  +     + P     T++I GLCK G   +A E+  + + +G+  +  T  AL+ GL
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C+ G  ++AFR+  K +       + ++Y  +I+G C   KL+ A M L  M ++GL P+
Sbjct: 516 CEAGKLDEAFRI-QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY+ LI G       E A    +   R G  P++ TY+ ++DG CK  R +E  +   
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +     ++ + V YN LI  +C+   +  AL L   M   GI P+  +YT+LI       
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           R+ E+++ FEE    G  P    YT++I GY + G +         M      P+ I Y 
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
            +I G  +   + EA  L + M EKG++P  +T     Y Y K
Sbjct: 755 VMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797



 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 221/448 (49%), Gaps = 1/448 (0%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           + +F + G+++EAV++  +M   G+ PN  T N V+      G  D A    E+M  RG+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            P   +Y ++V    +   + +A   L  M  +GF  +   +  +I  F E G   +A+ 
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
                   GL      + ++I+G CK G    A  +L+EM+  G+  N  + T++I  LC
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
                + A R F+  +   N  P     T +I+G C+  K ++A  L  +   +G + +T
Sbjct: 447 SHLMFDSALR-FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
            T   L+ G C+AG  + AF +   +   G   +  +YN ++ G C K ++ EA+  L +
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
               GL+ D  TY+ILI        +++A+  +    ++G+ PD+++Y+ +I   C+ +R
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
             E + FF+E +     P    Y  +I  YCR G L+MA++    M   G  P+S  Y +
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIP 599
           LI G+   S+++EA+ L++ M  +GL P
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEP 713



 Score =  202 bits (514), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 220/479 (45%), Gaps = 37/479 (7%)

Query: 164 AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
           A+++   + N+GM P+  T N+++               F+ +  +GV PD   +   + 
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP 283
           A+CK G V EA K  S M + G   +  +F  +I      G    A  +  K  + G++P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF 343
            LI ++ +++GL +   I  A+ +L+EM  +G+ PNV  +  LID   + G   KA  + 
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI- 387

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL------------------------ 379
             L+ S+       TY  +I GYC++ + + AE LL                        
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447

Query: 380 -----------GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
                      G M  + + P     TTLI G CK G   +A +L      +GF  +  T
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
            NA++ GLC+ G++ EA+++ K+    G   D+V+YN LIS  C +  + +A     +M 
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
           K G++PD ++Y+ LI       ++ E+  F+++  R G +P   TY+ MI G C+     
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
              +FF  M      P+++ Y  LI   C+  +L  A  L + M  KG+ P   T  +L
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686



 Score =  184 bits (466), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 196/414 (47%), Gaps = 4/414 (0%)

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+ P++  FT+ I   CK G +++A ++  +M   G  PNV T   +IDGL   G  ++A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           F    K+V     +P ++TY+ ++ G  R  ++  A  +L  M ++G  PN   Y  LID
Sbjct: 315 FMFKEKMVE-RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
              +AG+  +A ++ +LM  +G S    TYN ++ G CK G+   A ++LK+    G   
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           ++ ++  +I   C       AL    +M    + P     TTLI+  C+  + S++   +
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            + +  GF+   RT  +++ G C  G L  A +    +   GCV D ++Y TLISG C +
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW---IRTA 636
            KLDEA    D M+++GL P   T   L      ++    A+   D  ++      + T 
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613

Query: 637 TTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDL 690
           + ++   C   +      FF +++  +   N V     + A   S + ++  +L
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667



 Score =  182 bits (462), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 198/434 (45%), Gaps = 16/434 (3%)

Query: 134 SLIGNGNLQKAHEVMQCMV---------------RSFAEIGRLKEAVEMVFEMHNQGMVP 178
           S I  G+L KA E+   MV               + + + G+   A  ++ EM + G   
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 179 NTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL 238
           N  +   V+ + C   + D A     EM  R + P       ++   CK G   +A +  
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
              L++GF+VD  +   ++   CE G    A R   +    G   + +++ ++I G C +
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
             + +AF  L+EMV +G KP+ YT++ LI GL      E+A + F    +     P+V T
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-FWDDCKRNGMLPDVYT 612

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y+ MI+G C+ ++    +     M  + + PNT  Y  LI  +C++G    A +L   M 
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
            +G SPN  TY +++ G+    RV+EA  + ++    GLE +   Y  LI  + K   + 
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
           +   L  +M    + P+  +YT +I  + R+  ++E+     E    G +P   TY   I
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792

Query: 539 CGYCREGNLTMAIK 552
            GY ++G +  A K
Sbjct: 793 YGYLKQGGVLEAFK 806



 Score =  119 bits (297), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 141/341 (41%), Gaps = 46/341 (13%)

Query: 385 QGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQE 444
           +G+ P+   +TT I+  CK G  E A  L + M   G +PN+ T+N ++DGL   GR  E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI-------- 496
           A+   +     G+E   +TY+IL+    +   I  A  +  +M K G  P++        
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373

Query: 497 ---------------------------HSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
                                       +Y TLI  +C+  +   +E   +E +  GF  
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 530 TKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLY 589
            + ++TS+IC  C       A++F   M      P      TLISGLCK  K  +A  L+
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 590 DSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR-------TATTLVRK 642
              + KG +    T   L +  C+      A     R++K++  R       +  TL+  
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF----RIQKEILGRGCVMDRVSYNTLISG 549

Query: 643 LCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
            C ++K+  A +F  +++      +  T +  +   +  NK
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590



 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 4/181 (2%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
           N+Q    V   ++R++   GRL  A+E+  +M ++G+ PN+ T   ++K    +  V+ A
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
           + LFEEM   G+ P+   Y  ++  Y K+G +++ +  L  M  +    +  ++T++I  
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEE----MVCQG 315
           +   G  T A R  ++  + G+ P+ I +   I G  K+G + +AF+  +E     + +G
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEG 819

Query: 316 W 316
           W
Sbjct: 820 W 820


>AT4G19440.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:10602006-10604483 REVERSE
           LENGTH=825
          Length = 825

 Score =  224 bits (570), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 222/463 (47%), Gaps = 1/463 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V+      R+ +A  ++ EM  +G  PN    N ++    E G ++ A  + + M ++G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +   S++Y  ++  YCK G    A++ L  ML  GF V+  SFT +I   C       AL
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           R+  +     + P     T++I GLCK G   +A E+  + + +G+  +  T  AL+ GL
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C+ G  ++AFR+  K +       + ++Y  +I+G C   KL+ A M L  M ++GL P+
Sbjct: 516 CEAGKLDEAFRI-QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY+ LI G       E A    +   R G  P++ TY+ ++DG CK  R +E  +   
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +     ++ + V YN LI  +C+   +  AL L   M   GI P+  +YT+LI       
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           R+ E+++ FEE    G  P    YT++I GY + G +         M      P+ I Y 
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
            +I G  +   + EA  L + M EKG++P  +T     Y Y K
Sbjct: 755 VMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797



 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 221/448 (49%), Gaps = 1/448 (0%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           + +F + G+++EAV++  +M   G+ PN  T N V+      G  D A    E+M  RG+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            P   +Y ++V    +   + +A   L  M  +GF  +   +  +I  F E G   +A+ 
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
                   GL      + ++I+G CK G    A  +L+EM+  G+  N  + T++I  LC
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
                + A R F+  +   N  P     T +I+G C+  K ++A  L  +   +G + +T
Sbjct: 447 SHLMFDSALR-FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
            T   L+ G C+AG  + AF +   +   G   +  +YN ++ G C K ++ EA+  L +
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
               GL+ D  TY+ILI        +++A+  +    ++G+ PD+++Y+ +I   C+ +R
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
             E + FF+E +     P    Y  +I  YCR G L+MA++    M   G  P+S  Y +
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIP 599
           LI G+   S+++EA+ L++ M  +GL P
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEP 713



 Score =  202 bits (514), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 220/479 (45%), Gaps = 37/479 (7%)

Query: 164 AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
           A+++   + N+GM P+  T N+++               F+ +  +GV PD   +   + 
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP 283
           A+CK G V EA K  S M + G   +  +F  +I      G    A  +  K  + G++P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF 343
            LI ++ +++GL +   I  A+ +L+EM  +G+ PNV  +  LID   + G   KA  + 
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI- 387

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL------------------------ 379
             L+ S+       TY  +I GYC++ + + AE LL                        
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447

Query: 380 -----------GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
                      G M  + + P     TTLI G CK G   +A +L      +GF  +  T
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
            NA++ GLC+ G++ EA+++ K+    G   D+V+YN LIS  C +  + +A     +M 
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
           K G++PD ++Y+ LI       ++ E+  F+++  R G +P   TY+ MI G C+     
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
              +FF  M      P+++ Y  LI   C+  +L  A  L + M  KG+ P   T  +L
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686



 Score =  184 bits (466), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 196/414 (47%), Gaps = 4/414 (0%)

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+ P++  FT+ I   CK G +++A ++  +M   G  PNV T   +IDGL   G  ++A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           F    K+V     +P ++TY+ ++ G  R  ++  A  +L  M ++G  PN   Y  LID
Sbjct: 315 FMFKEKMVE-RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
              +AG+  +A ++ +LM  +G S    TYN ++ G CK G+   A ++LK+    G   
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           ++ ++  +I   C       AL    +M    + P     TTLI+  C+  + S++   +
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            + +  GF+   RT  +++ G C  G L  A +    +   GCV D ++Y TLISG C +
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW---IRTA 636
            KLDEA    D M+++GL P   T   L      ++    A+   D  ++      + T 
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613

Query: 637 TTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDL 690
           + ++   C   +      FF +++  +   N V     + A   S + ++  +L
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667



 Score =  182 bits (462), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 198/434 (45%), Gaps = 16/434 (3%)

Query: 134 SLIGNGNLQKAHEVMQCMV---------------RSFAEIGRLKEAVEMVFEMHNQGMVP 178
           S I  G+L KA E+   MV               + + + G+   A  ++ EM + G   
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 179 NTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL 238
           N  +   V+ + C   + D A     EM  R + P       ++   CK G   +A +  
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
              L++GF+VD  +   ++   CE G    A R   +    G   + +++ ++I G C +
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
             + +AF  L+EMV +G KP+ YT++ LI GL      E+A + F    +     P+V T
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-FWDDCKRNGMLPDVYT 612

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y+ MI+G C+ ++    +     M  + + PNT  Y  LI  +C++G    A +L   M 
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
            +G SPN  TY +++ G+    RV+EA  + ++    GLE +   Y  LI  + K   + 
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
           +   L  +M    + P+  +YT +I  + R+  ++E+     E    G +P   TY   I
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792

Query: 539 CGYCREGNLTMAIK 552
            GY ++G +  A K
Sbjct: 793 YGYLKQGGVLEAFK 806



 Score =  119 bits (297), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 141/341 (41%), Gaps = 46/341 (13%)

Query: 385 QGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQE 444
           +G+ P+   +TT I+  CK G  E A  L + M   G +PN+ T+N ++DGL   GR  E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI-------- 496
           A+   +     G+E   +TY+IL+    +   I  A  +  +M K G  P++        
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373

Query: 497 ---------------------------HSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
                                       +Y TLI  +C+  +   +E   +E +  GF  
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 530 TKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLY 589
            + ++TS+IC  C       A++F   M      P      TLISGLCK  K  +A  L+
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 590 DSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR-------TATTLVRK 642
              + KG +    T   L +  C+      A     R++K++  R       +  TL+  
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF----RIQKEILGRGCVMDRVSYNTLISG 549

Query: 643 LCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
            C ++K+  A +F  +++      +  T +  +   +  NK
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590



 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 4/181 (2%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
           N+Q    V   ++R++   GRL  A+E+  +M ++G+ PN+ T   ++K    +  V+ A
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
           + LFEEM   G+ P+   Y  ++  Y K+G +++ +  L  M  +    +  ++T++I  
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEE----MVCQG 315
           +   G  T A R  ++  + G+ P+ I +   I G  K+G + +AF+  +E     + +G
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEG 819

Query: 316 W 316
           W
Sbjct: 820 W 820


>AT1G12620.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:4294883-4296748 REVERSE
           LENGTH=621
          Length = 621

 Score =  223 bits (568), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 213/415 (51%), Gaps = 1/415 (0%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           GR+ EA+E+V  M   G  P   TLN ++   C  G V  A  L + M   G  P+  +Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             ++   CK G    A + L  M +R   +D   +++II   C+ G    A   F++   
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
            G K ++I +T++I G C  G      ++L +M+ +   P+V   +ALID   K+G   +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A  L  ++++     P+ +TYT++I+G+C++++L++A  +L  M  +G  PN  T+  LI
Sbjct: 336 AEELHKEMIQ-RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
           +G+CKA   +   +L   MS  G   +  TYN ++ G C+ G+++ A ++ ++     + 
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            D V+Y IL+   C   + ++AL +F K+ KS ++ DI  Y  +I   C   ++ ++   
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           F      G  P  +TY  MI G C++G+L+ A   F +M + G  P+   Y  LI
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569



 Score =  221 bits (562), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 220/440 (50%), Gaps = 5/440 (1%)

Query: 148 MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS 207
           +  +V      G++ +AV ++  M   G  PN  T   V+K+ C+ G    A  L  +M 
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
            R +  D+  Y +++   CK G++  A    + M  +GF  D   +T +I  FC  G   
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
              +         + P+++ F+++I+   K G +++A E+ +EM+ +G  P+  T+T+LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           DG CK+   +KA  + L L+ S+   PN+ T+  +INGYC+ + ++    L  +M  +G+
Sbjct: 360 DGFCKENQLDKANHM-LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
           + +T TY TLI G C+ G  E A +L   M      P+I +Y  ++DGLC  G  ++A +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           + +    + +E D   YNI+I   C  + +  A  LF  +   G++PD+ +Y  +I   C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS- 566
           ++  +SE+++ F +    G  P   TY  +I  +  EG+ T + K    +   G   D+ 
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598

Query: 567 ---IAYGTLISGLCKQSKLD 583
              +    L  G  K+S LD
Sbjct: 599 TVKMVVDMLSDGRLKKSFLD 618



 Score =  218 bits (556), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 211/425 (49%), Gaps = 1/425 (0%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           G  P+T T + ++   C  G V  A  L + M   G  P   +   +V   C  G V +A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
              +  M++ GF  +  ++  ++   C+ G    A+    K  +  +K + + ++ +I+G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
           LCK GS+  AF +  EM  +G+K ++  +T LI G C  G  +   +L   +++ +   P
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT-P 315

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           +V+ ++A+I+ + ++ KL  AE L   M ++G+ P+T TYT+LIDG CK    ++A  ++
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
           +LM  +G  PNI T+N +++G CK   + +  ++ +     G+ AD VTYN LI   C+ 
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
             ++ A  LF +M    ++PDI SY  L+   C      ++   FE+  +         Y
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
             +I G C    +  A   F  +   G  PD   Y  +I GLCK+  L EA  L+  M E
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555

Query: 595 KGLIP 599
            G  P
Sbjct: 556 DGHSP 560



 Score =  218 bits (554), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 239/473 (50%), Gaps = 18/473 (3%)

Query: 197 DYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD-------RGFLVD 249
           D A  LF+EM+     P        ++ + ++ +V+   K   ++LD       +G   +
Sbjct: 54  DDAVDLFQEMTRSRPRP-------RLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHN 106

Query: 250 NASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLE 309
             + +++I+  C     + A     K   +G +P+ + F+++I GLC  G + +A E+++
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166

Query: 310 EMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRD 369
            MV  G KP + T  AL++GLC  G    A  L  ++V +   +PN +TY  ++   C+ 
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKS 225

Query: 370 DKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTY 429
            +   A  LL +M+E+ +  +   Y+ +IDG CK G+ + AF+L N M  +GF  +I  Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285

Query: 430 NAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAK 489
             ++ G C  GR  +  K+L+D     +  D V ++ LI    K+  +++A  L  +M +
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345

Query: 490 SGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTM 549
            GI PD  +YT+LI  FC+E ++ ++    +  V  G  P  RT+  +I GYC+   +  
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405

Query: 550 AIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAY 609
            ++ F +MS  G V D++ Y TLI G C+  KL+ A+ L+  M+ + + P  V+   L  
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465

Query: 610 EYCKIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKL 659
             C   +   A+ I +++EK   +L I     ++  +C+  KV  A   F  L
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518



 Score =  207 bits (528), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 238/501 (47%), Gaps = 6/501 (1%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           +AV++  EM      P     + +  +       D    L ++M  +G+  +  +  +M+
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 223 VAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK 282
              C+   +  A   +  ++  G+  D  +F+ +I+  C +G  + AL    +  +MG K
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P LI   +++ GLC  G +  A  +++ MV  G++PN  T+  ++  +CK G T  A  L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
             K+      K + + Y+ +I+G C+D  L+ A  L   M+ +G   +   YTTLI G C
Sbjct: 235 LRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
            AG ++    L+  M +   +P++  ++A++D   K+G+++EA ++ K+    G+  D V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           TY  LI   CK+  + +A  +   M   G  P+I ++  LI  +C+   + +    F + 
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
              G +    TY ++I G+C  G L +A + F  M      PD ++Y  L+ GLC   + 
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473

Query: 583 DEARGLYDSMIEKGLIPCEVTRIT-LAYEYC---KIDDCCSAMVILDRLEKKLWIRTATT 638
           ++A  +++  IEK  +  ++     + +  C   K+DD       L     K  ++T   
Sbjct: 474 EKALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532

Query: 639 LVRKLCSERKVGMAALFFHKL 659
           ++  LC +  +  A L F K+
Sbjct: 533 MIGGLCKKGSLSEADLLFRKM 553



 Score =  203 bits (516), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 233/480 (48%), Gaps = 4/480 (0%)

Query: 153 RSFAEIGRLKE---AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
           R F+ + R K+    +++  +M  +G+  N  TL++++   C    +  A     ++   
Sbjct: 77  RLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKL 136

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           G  PD+ ++  ++   C  G V EA + +  M++ G      +   +++  C  G  + A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           +    +  + G +PN + +  +++ +CK G    A E+L +M  +  K +   ++ +IDG
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
           LCK G  + AF LF ++   +  K +++ YT +I G+C   + +    LL  M ++ + P
Sbjct: 257 LCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           +   ++ LID   K G    A +L   M + G SP+  TY +++DG CK+ ++ +A  ML
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
                 G   +  T+NILI+ +CK   I   L LF KM+  G+  D  +Y TLI  FC  
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
            ++  ++  F+E V     P   +Y  ++ G C  G    A++ F ++       D   Y
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
             +I G+C  SK+D+A  L+ S+  KG+ P   T   +    CK      A ++  ++E+
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555



 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 16/182 (8%)

Query: 139 GNLQKAHEVMQCMVR---------------SFAEIGRLKEAVEMVFEMHNQGMVPNTQTL 183
           G L+ A E+ Q MV                   + G  ++A+E+  ++    M  +    
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
           N+++   C    VD A  LF  +  +GV PD  +Y +M+   CK G++ EAD     M +
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ 303
            G   +  ++ ++I     +G AT++ +   +    G   +  +   M+  +   G +K+
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD-ASTVKMVVDMLSDGRLKK 614

Query: 304 AF 305
           +F
Sbjct: 615 SF 616


>AT1G64100.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr1:23791585-23793641 FORWARD LENGTH=666
          Length = 666

 Score =  222 bits (565), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 232/472 (49%), Gaps = 20/472 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVM-------KIACEMGLVDY----- 198
           +++ F +  +L  ++    ++   G  P+  T N ++       +I+  + L  Y     
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 199 ---AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
              A  LF++M   G+ P   ++  ++   C  G VLEA   ++ M+ +G  +D  ++  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           I++  C+ G    AL    K  +  +KP+++ ++++I+ LCK G    A  +  EM+ +G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
             PNV+T+  +IDG C  G    A RL   ++  E N P+VLT+ A+I+   ++ KL  A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN-PDVLTFNALISASVKEGKLFEA 385

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
           E L   M  + + P+T TY ++I G CK   F+ A  + +LM+    SP++ T+N I+D 
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDV 441

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
            C+  RV E  ++L++    GL A+  TYN LI   C+  ++  A  LF +M   G+ PD
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
             +   L+  FC  +++ E+   FE             Y  +I G C+   +  A   F 
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
            +  HG  PD   Y  +ISG C +S + +A  L+  M + G  P   T  TL
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613



 Score =  203 bits (517), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 214/453 (47%), Gaps = 31/453 (6%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           EAV +  +M   G+ P   T N ++   C  G V  A  L  +M  +G+H D  +Y  +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 223 VAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK 282
              CKMG+   A   LS M +     D   ++ II   C+ G  + A   F +  + G+ 
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           PN+  +  MI+G C  G    A  +L +M+ +   P+V T  ALI    K+G   +A +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 343 ----------------------FLKLVRSENNK--------PNVLTYTAMINGYCRDDKL 372
                                 F K  R ++ K        P+V+T+  +I+ YCR  ++
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
           +    LL  +  +GL+ NT TY TLI G C+  N   A DL   M   G  P+  T N +
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
           + G C+  +++EA ++ +    + ++ D V YNI+I   CK + + +A  LF  +   G+
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568

Query: 493 QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIK 552
           +PD+ +Y  +I+ FC +  +S++ + F +    G  P   TY ++I G  + G +  +I+
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628

Query: 553 FFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
               M  +G   D+     +++ L    +LD++
Sbjct: 629 LISEMRSNGFSGDAFTI-KMVADLITDGRLDKS 660



 Score =  201 bits (512), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/567 (23%), Positives = 251/567 (44%), Gaps = 56/567 (9%)

Query: 155 FAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
           F  + R   A+ +  +M  + +  N  + N+++K  C+   + ++   F +++  G  PD
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPD 175

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNA---------------SFTLIISE 259
             ++  ++   C    + EA      M++ GFL   A               +F  +I+ 
Sbjct: 176 VVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLING 235

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
            C +G    A    +K    GL  +++ + +++ G+CK G  K A  +L +M     KP+
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
           V  ++A+ID LCK G    A  LF +++  +   PNV TY  MI+G+C   + + A+ LL
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
             M E+ + P+  T+  LI    K G    A  L + M      P+  TYN+++ G CK 
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
            R  +A  M    F      D VT+N +I  +C+   + + + L  ++++ G+  +  +Y
Sbjct: 415 NRFDDAKHM----FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
            TLI  FC    ++ ++  F+E +  G  P   T   ++ G+C    L  A++ F  +  
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530

Query: 560 HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCS 619
                D++AY  +I G+CK SK+DEA  L+ S+   G+ P                    
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP-------------------- 570

Query: 620 AMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACY 679
                        ++T   ++   C +  +  A + FHK+ D     +  T    +  C 
Sbjct: 571 ------------DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618

Query: 680 ESNK----YALVSDLSARIYKDNRLTV 702
           ++ +      L+S++ +  +  +  T+
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTI 645



 Score =  155 bits (393), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 168/357 (47%), Gaps = 6/357 (1%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G   +A  +  EM  +G+ PN  T N ++   C  G    AQ L  +M  R ++PD  ++
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             ++ A  K G + EA+K    ML R    D  ++  +I  FC+      A   F    D
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----D 425

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
           +   P+++ F ++I+  C+   + +  ++L E+  +G   N  T+  LI G C+      
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A  LF +++ S    P+ +T   ++ G+C ++KL  A  L   ++   +  +T  Y  +I
Sbjct: 486 AQDLFQEMI-SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
            G CK    + A+DL   +   G  P++ TYN ++ G C K  + +A  +      NG E
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES 515
            D  TYN LI    K  +I +++ L S+M  +G   D  +   ++A    + R+ +S
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT-IKMVADLITDGRLDKS 660



 Score = 89.4 bits (220), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 1/190 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F E+  L  A ++  EM + G+ P+T T N+++   CE   ++ A  LFE +    
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +  D+ +Y +++   CK   V EA      +   G   D  ++ ++IS FC K   + A 
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             FHK  D G +P+   + ++I G  K G I ++ E++ EM   G+  + +T   + D L
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-L 651

Query: 331 CKKGWTEKAF 340
              G  +K+F
Sbjct: 652 ITDGRLDKSF 661


>AT1G63400.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:23507320-23509053 FORWARD
           LENGTH=577
          Length = 577

 Score =  222 bits (565), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 225/484 (46%), Gaps = 36/484 (7%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ + A++ +    + +  +M   G+  N  T N+++   C    +  A  L  +M   G
Sbjct: 91  LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P   +   ++  YC    + +A   +  M++ G+  D  +FT +I        A+ A+
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLE--------------------- 309
               +    G +PNL+ +  ++ GLCKRG I  AF +L                      
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270

Query: 310 --------------EMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPN 355
                         EM  +G +PNV T+++LI  LC       A RL   ++  + N PN
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN-PN 329

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
           V+T+ A+I+ + ++ KL  AE L   M ++ + P+  TY++LI+G C     + A  +  
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389

Query: 416 LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQA 475
           LM  +   PN+ TYN +++G CK  R+ E  ++ ++    GL  + VTY  LI    +  
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449

Query: 476 DIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYT 535
           D   A  +F +M   G+ P+I +Y TL+   C+  ++ ++ + FE   R    PT  TY 
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509

Query: 536 SMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
            MI G C+ G +      F  +S  G  PD I Y T+ISG C++   +EA  L+  M E 
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569

Query: 596 GLIP 599
           G +P
Sbjct: 570 GPLP 573



 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 207/401 (51%), Gaps = 4/401 (0%)

Query: 252 SFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM 311
           ++ ++I+ FC +   + AL    K   +G +P+++  +S++ G C    I  A  ++++M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 312 VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK 371
           V  G++P+  T T LI GL       +A  L  ++V+    +PN++TY  ++NG C+   
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGD 240

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
           ++ A  LL +M+   +  N   Y+T+ID  CK  + + A +L   M  +G  PN+ TY++
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300

Query: 432 IVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           ++  LC   R  +A ++L D     +  + VT+N LI    K+  + +A  L+ +M K  
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
           I PDI +Y++LI  FC   R+ E++  FE  +     P   TY ++I G+C+   +   +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420

Query: 552 KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEY 611
           + F  MS  G V +++ Y TLI G  +    D A+ ++  M+  G+ P  +T  TL    
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480

Query: 612 CKIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKV 649
           CK      AMV+ + L++   +  I T   ++  +C   KV
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521



 Score =  204 bits (519), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 228/458 (49%), Gaps = 9/458 (1%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +L +A+ +   M     +P+    N ++    +M   D    L E+M   G+  +  +Y 
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++  +C+   +  A   L  M+  G+     + + +++ +C     + A+    +  +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G +P+ I FT++I GL       +A  +++ MV +G +PN+ T+  +++GLCK+G  + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCR----DDKLNRAEMLLGRMKEQGLIPNTNTYT 395
           F L  K+  +   + NV+ Y+ +I+  C+    DD LN    L   M+ +G+ PN  TY+
Sbjct: 245 FNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALN----LFTEMENKGVRPNVITYS 299

Query: 396 TLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN 455
           +LI   C    +  A  L++ M     +PN+ T+NA++D   K+G++ EA K+  +    
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359

Query: 456 GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES 515
            ++ D  TY+ LI+  C    + +A  +F  M      P++ +Y TLI  FC+ KR+ E 
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419

Query: 516 EMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
              F E  + G +    TYT++I G+ +  +   A   F +M   G  P+ + Y TL+ G
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479

Query: 576 LCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
           LCK  KL++A  +++ +    + P   T   +    CK
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517



 Score =  204 bits (519), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 202/407 (49%), Gaps = 1/407 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R+ +AV +V +M   G  P+T T   ++           A  L + M  RG  P+  +Y 
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           V+V   CK G++  A   L+ M       +   ++ +I   C+      AL  F +  + 
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G++PN+I ++S+I  LC       A  +L +M+ +   PNV T  ALID   K+G   +A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            +L+ ++++   + P++ TY+++ING+C  D+L+ A+ +   M  +   PN  TY TLI+
Sbjct: 350 EKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G CKA   +   +L   MS+ G   N  TY  ++ G  +      A  + K    +G+  
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           + +TYN L+   CK   +++A+ +F  + +S ++P I++Y  +I   C+  ++ +    F
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS 566
                 G  P    Y +MI G+CR+G    A   F +M + G +PDS
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575



 Score =  201 bits (511), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 202/374 (54%), Gaps = 1/374 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +  EAV +V  M  +G  PN  T  +V+   C+ G +D A  L  +M A  +  +   Y 
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            ++ + CK  +  +A    + M ++G   +  +++ +IS  C     + A R      + 
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
            + PN++ F ++I+   K G + +A ++ +EM+ +   P+++T+++LI+G C     ++A
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             +F +L+ S++  PNV+TY  +ING+C+  +++    L   M ++GL+ NT TYTTLI 
Sbjct: 385 KHMF-ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G  +A + + A  +   M  +G  PNI TYN ++DGLCK G++++A  + +    + +E 
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
              TYNI+I   CK   ++    LF  ++  G++PD+  Y T+I+ FCR+    E++  F
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563

Query: 520 EEAVRFGFIPTKRT 533
            +    G +P   T
Sbjct: 564 RKMREDGPLPDSGT 577



 Score =  192 bits (487), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 199/404 (49%), Gaps = 4/404 (0%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P++  F  ++  + K         + E+M   G   N+YT+  LI+  C++     A  L
Sbjct: 83  PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
             K+++    +P+++T ++++NGYC   +++ A  L+ +M E G  P+T T+TTLI G  
Sbjct: 143 LGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
                  A  L++ M + G  PN+ TY  +V+GLCK+G +  A+ +L       +EA+ V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
            Y+ +I   CK      AL LF++M   G++P++ +Y++LI+  C  +R S++     + 
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
           +     P   T+ ++I  + +EG L  A K +  M      PD   Y +LI+G C   +L
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR---TATTL 639
           DEA+ +++ MI K   P  VT  TL   +CK       + +   + ++  +    T TTL
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
           +      R    A + F +++    H N +T    +    ++ K
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485



 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 141/310 (45%), Gaps = 3/310 (0%)

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
           KL+ A  L G M +   +P+   +  L+    K   F+    L   M R G S N+ TYN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            +++  C++ ++  A  +L      G E   VT + L++ +C    I  A+AL  +M + 
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           G +PD  ++TTLI       + SE+    +  V+ G  P   TY  ++ G C+ G++ +A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
               ++M       + + Y T+I  LCK    D+A  L+  M  KG+ P  +T  +L   
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304

Query: 611 YCKIDDCCSAMVIL-DRLEKKL--WIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVN 667
            C  +    A  +L D +E+K+   + T   L+     E K+  A   + +++      +
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364

Query: 668 RVTLAAFMTA 677
             T ++ +  
Sbjct: 365 IFTYSSLING 374



 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 2/95 (2%)

Query: 159 GRLKEAVEMVFE-MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSAS 217
           G+L++A+ +VFE +    M P   T N++++  C+ G V+    LF  +S +GV PD   
Sbjct: 484 GKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNAS 252
           Y  M+  +C+ G   EAD     M + G L D+ +
Sbjct: 543 YNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577


>AT5G61990.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:24900186-24903110 REVERSE
           LENGTH=974
          Length = 974

 Score =  220 bits (561), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 241/505 (47%), Gaps = 44/505 (8%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++++F +  R  +A+ ++ EM  QG+ P+    N ++    +   +D A+    EM   G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P++ +Y   +  Y +      ADK++  M + G L +    T +I+E+C+KG    A 
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             +    D G+  +   +T ++ GL K   +  A E+  EM  +G  P+V+++  LI+G 
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K G  +KA  +F ++V  E   PNV+ Y  ++ G+CR  ++ +A+ LL  M  +GL PN
Sbjct: 638 SKLGNMQKASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM-- 448
             TY T+IDG+CK+G+   AF L + M  +G  P+   Y  +VDG C+   V+ A  +  
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756

Query: 449 -----------------------------------LKDG-FHNGLEADKVTYNILISEHC 472
                                              L DG F    + + VTYNI+I   C
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           K+ +++ A  LF +M  + + P + +YT+L+  + +  R +E    F+EA+  G  P   
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI 876

Query: 533 TYTSMICGYCREGNLTMAIKFFHRM-----SDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
            Y+ +I  + +EG  T A+    +M      D GC         L+SG  K  +++ A  
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936

Query: 588 LYDSMIEKGLIPCEVTRITLAYEYC 612
           + ++M+    IP   T I L  E C
Sbjct: 937 VMENMVRLQYIPDSATVIELINESC 961



 Score =  217 bits (553), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 248/522 (47%), Gaps = 5/522 (0%)

Query: 139 GNLQKAHEVMQCMVRSF-AEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVD 197
           GN+Q   +V+    + F      +  A+++   M  +G+VP   T ++++   C++  ++
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLE 294

Query: 198 YAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLII 257
            A+ L  EM + GV  D+ +Y +++    K  N   A   +  M+  G  +    +   I
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 258 SEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
               ++G   +A   F      GL P    + S+IEG C+  +++Q +E+L EM  +   
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
            + YT+  ++ G+C  G  + A+ +  +++ S   +PNV+ YT +I  + ++ +   A  
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAMR 473

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
           +L  MKEQG+ P+   Y +LI G  KA   + A   +  M   G  PN  TY A + G  
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533

Query: 438 KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIH 497
           +      A K +K+    G+  +KV    LI+E+CK+  + +A + +  M   GI  D  
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593

Query: 498 SYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
           +YT L+    +  ++ ++E  F E    G  P   +Y  +I G+ + GN+  A   F  M
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDC 617
            + G  P+ I Y  L+ G C+  ++++A+ L D M  KGL P  VT  T+   YCK  D 
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713

Query: 618 CSAMVILDRLEKKLWIRTA---TTLVRKLCSERKVGMAALFF 656
             A  + D ++ K  +  +   TTLV   C    V  A   F
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755



 Score =  207 bits (528), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 238/512 (46%), Gaps = 14/512 (2%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V+     G L  A  +V EM   G  PN      ++K   +      A  + +EM  +G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD   Y  +++   K   + EA  +L  M++ G   +  ++   IS + E      A 
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           +Y  +  + G+ PN +  T +I   CK+G + +A      MV QG   +  T+T L++GL
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K    + A  +F ++ R +   P+V +Y  +ING+ +   + +A  +   M E+GL PN
Sbjct: 603 FKNDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
              Y  L+ G C++G  E+A +L++ MS +G  PN  TY  I+DG CK G + EA+++  
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA-VFCRE 509
           +    GL  D   Y  L+   C+  D+++A+ +F    K G       +  LI  VF   
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFG 780

Query: 510 KRMSESEMF-------FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGC 562
           K   ++E+        F+   RFG  P   TY  MI   C+EGNL  A + FH+M +   
Sbjct: 781 KTELKTEVLNRLMDGSFD---RFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMV 622
           +P  I Y +L++G  K  +  E   ++D  I  G+ P  +    +   + K      A+V
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896

Query: 623 ILDRLEKKLWIRTATTLVRKLCSERKVGMAAL 654
           ++D++  K  +     L    C     G A +
Sbjct: 897 LVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928



 Score =  183 bits (465), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 194/408 (47%), Gaps = 17/408 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  + + G++ EA      M +QG++ + +T  ++M    +   VD A+ +F EM  +G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD  SY V++  + K+GN+ +A      M++ G   +   + +++  FC  G   +A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               + S  GL PN + + ++I+G CK G + +AF + +EM  +G  P+ + +T L+DG 
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 331 CKKGWTEKAFRLFLKLVRSENNK---PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           C+    E+A  +F       N K    +   + A+IN   +  K      +L R+ +   
Sbjct: 743 CRLNDVERAITIF-----GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797

Query: 388 ----IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
                PN  TY  +ID  CK GN E A +L + M      P + TY ++++G  K GR  
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM-----AKSGIQPDIHS 498
           E + +  +    G+E D + Y+++I+   K+    +AL L  +M        G +  I +
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIST 917

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
              L++ F +   M  +E   E  VR  +IP   T   +I   C   N
Sbjct: 918 CRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965



 Score =  142 bits (358), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 185/466 (39%), Gaps = 103/466 (22%)

Query: 249 DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL------------- 295
           D   F ++   +  KG+   A+  F     + L P L     +++ L             
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 296 ----------------------CKRGSIK---------------------QAFEMLEEMV 312
                                 C+ G+++                      A ++ E M+
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL----VRSENNKPNVLTYTAMINGY-- 366
           C+G  P  YT+  LIDGLCK    E A  L +++    V  +N+     TY+ +I+G   
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNH-----TYSLLIDGLLK 324

Query: 367 ---------------------------------CRDDKLNRAEMLLGRMKEQGLIPNTNT 393
                                             ++  + +A+ L   M   GLIP    
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           Y +LI+G+C+  N  + ++L+  M +     +  TY  +V G+C  G +  AY ++K+  
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
            +G   + V Y  LI    + +    A+ +  +M + GI PDI  Y +LI    + KRM 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           E+  F  E V  G  P   TY + I GY        A K+   M + G +P+ +    LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564

Query: 574 SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA---YEYCKIDD 616
           +  CK+ K+ EA   Y SM+++G++    T   L    ++  K+DD
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610



 Score =  139 bits (351), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/512 (23%), Positives = 216/512 (42%), Gaps = 56/512 (10%)

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVD-NASFTLIISEFCEKGFATRALRYFHKFSDMGL- 281
           A  ++  +L+ + W   ++     ++ N    L +         ++ L +F+      + 
Sbjct: 34  ASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVT 93

Query: 282 KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK-PNVYTHTA--------------- 325
           +  L +F+ +   LC  GS ++A  ++E M+ + W    V++                  
Sbjct: 94  EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVL 153

Query: 326 ---LIDGLCKKGWTEKAFRLF-----LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
              L DG   KG+ E+A  +F     L+LV      P +     +++   R ++L+    
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELV------PRLSRCKVLLDALLRWNRLDLFWD 207

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE----------------- 420
           +   M E+ ++ +  TY  LI  HC+AGN +   D++    +E                 
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267

Query: 421 ----GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
               G  P   TY+ ++DGLCK  R+++A  +L +    G+  D  TY++LI    K  +
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
              A  L  +M   GI    + Y   I V  +E  M +++  F+  +  G IP  + Y S
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           +I GYCRE N+    +    M     V     YGT++ G+C    LD A  +   MI  G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447

Query: 597 LIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW---IRTATTLVRKLCSERKVGMAA 653
             P  V   TL   + +      AM +L  ++++     I    +L+  L   +++  A 
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507

Query: 654 LFFHKLLDMDFHVNRVTLAAFMTACYESNKYA 685
            F  ++++     N  T  AF++   E++++A
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539


>AT1G63330.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:23489840-23491519 FORWARD
           LENGTH=559
          Length = 559

 Score =  219 bits (559), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 240/487 (49%), Gaps = 6/487 (1%)

Query: 177 VPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADK 236
           +P+    N ++    +M   D    L E+M   G+  +  +Y +++  +C+   +  A  
Sbjct: 7   LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66

Query: 237 WLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLC 296
            L  M+  G+     + + +++ +C     + A+    +  +MG +P+ I FT++I GL 
Sbjct: 67  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126

Query: 297 KRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNV 356
                 +A  +++ MV +G +PN+ T+  +++GLCK+G  + AF L  K+  +   + +V
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADV 185

Query: 357 LTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNL 416
           + +  +I+  C+   ++ A  L   M+ +G+ PN  TY++LI   C  G +  A  L++ 
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           M  +  +PN+ T+NA++D   K+G+  EA K+  D     ++ D  TYN LI+  C    
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
           + +A  +F  M      PD+ +Y TLI  FC+ KR+ +    F E    G +    TYT+
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           +I G   +G+   A K F +M   G  PD + Y  L+ GLC   KL++A  ++D M +K 
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKS 424

Query: 597 LIPCEVTRITLAYE-YC---KIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMA 652
            I  ++   T   E  C   K+DD       L     K  + T  T++  LCS+R +  A
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484

Query: 653 ALFFHKL 659
                K+
Sbjct: 485 YALLKKM 491



 Score =  218 bits (555), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 204/414 (49%), Gaps = 1/414 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R+ +AV +V +M   G  P+T T   ++           A  L + M  RG  P+  +Y 
Sbjct: 95  RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           V+V   CK G++  A   L+ M       D   F  II   C+      AL  F +    
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G++PN++ ++S+I  LC  G    A ++L +M+ +   PN+ T  ALID   K+G   +A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            +L   +++   + P++ TY ++ING+C  D+L++A+ +   M  +   P+ +TY TLI 
Sbjct: 275 EKLHDDMIKRSID-PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G CK+   E   +L   MS  G   +  TY  ++ GL   G    A K+ K    +G+  
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D +TY+IL+   C    +++AL +F  M KS I+ DI+ YTT+I   C+  ++ +    F
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
                 G  P   TY +MI G C +  L  A     +M + G +PDS  Y TLI
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507



 Score =  214 bits (545), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 237/489 (48%), Gaps = 1/489 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F    ++  A+ ++ +M   G  P+  TL+ ++   C    +  A  L ++M   G
Sbjct: 51  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD+ ++  ++          EA   +  M+ RG   +  ++ ++++  C++G    A 
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
              +K     ++ +++ F ++I+ LCK   +  A  + +EM  +G +PNV T+++LI  L
Sbjct: 171 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C  G    A +L   ++  + N PN++T+ A+I+ + ++ K   AE L   M ++ + P+
Sbjct: 231 CSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY +LI+G C     ++A  +   M  +   P++ TYN ++ G CK  RV++  ++ +
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +  H GL  D VTY  LI       D   A  +F +M   G+ PDI +Y+ L+   C   
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           ++ ++   F+   +         YT+MI G C+ G +      F  +S  G  P+ + Y 
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           T+ISGLC +  L EA  L   M E G +P   T  TL   + +  D  ++  ++  +   
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 529

Query: 631 LWIRTATTL 639
            ++  A+T+
Sbjct: 530 RFVGDASTI 538



 Score =  214 bits (545), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 220/462 (47%), Gaps = 1/462 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ + A++ +    + +  +M   G+  N  T N+++   C    +  A  L  +M   G
Sbjct: 16  LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P   +   ++  YC    + +A   +  M++ G+  D  +FT +I        A+ A+
Sbjct: 76  YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +    G +PNL+ +  ++ GLCKRG I  AF +L +M     + +V     +ID L
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK    + A  LF K + ++  +PNV+TY+++I+  C   + + A  LL  M E+ + PN
Sbjct: 196 CKYRHVDDALNLF-KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             T+  LID   K G F  A  L + M +    P+I TYN++++G C   R+ +A +M +
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                    D  TYN LI   CK   ++    LF +M+  G+  D  +YTTLI     + 
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
               ++  F++ V  G  P   TY+ ++ G C  G L  A++ F  M       D   Y 
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYC 612
           T+I G+CK  K+D+   L+ S+  KG+ P  VT  T+    C
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476



 Score =  194 bits (493), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 216/426 (50%), Gaps = 2/426 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +  EAV +V  M  +G  PN  T  +V+   C+ G +D A  L  +M A  +  D   + 
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            ++ + CK  +V +A      M  +G   +  +++ +IS  C  G  + A +      + 
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
            + PNL+ F ++I+   K G   +A ++ ++M+ +   P+++T+ +LI+G C     +KA
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            ++F  +V S++  P++ TY  +I G+C+  ++     L   M  +GL+ +T TYTTLI 
Sbjct: 310 KQMFEFMV-SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G    G+ + A  +   M  +G  P+I TY+ ++DGLC  G++++A ++      + ++ 
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D   Y  +I   CK   +     LF  ++  G++P++ +Y T+I+  C ++ + E+    
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
           ++    G +P   TY ++I  + R+G+   + +    M     V D+   G L++ +   
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHD 547

Query: 580 SKLDEA 585
            +LD++
Sbjct: 548 GRLDKS 553



 Score =  191 bits (484), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 207/435 (47%), Gaps = 8/435 (1%)

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
            K   +G+  NL  +  +I   C+R  I  A  +L +M+  G++P++ T ++L++G C  
Sbjct: 34  EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
                A  L  ++V     +P+ +T+T +I+G    +K + A  L+ RM ++G  PN  T
Sbjct: 94  KRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 152

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           Y  +++G CK G+ + AF+L+N M       ++  +N I+D LCK   V +A  + K+  
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
             G+  + VTY+ LIS  C       A  L S M +  I P++ ++  LI  F +E +  
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           E+E   ++ ++    P   TY S+I G+C    L  A + F  M    C PD   Y TLI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332

Query: 574 SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW- 632
            G CK  ++++   L+  M  +GL+   VT  TL        DC +A  +  ++      
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392

Query: 633 --IRTATTLVRKLCSERKVGMAALFFHKL----LDMDFHVNRVTLAAFMTACYESNKYAL 686
             I T + L+  LC+  K+  A   F  +    + +D ++    +     A    + + L
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452

Query: 687 VSDLSARIYKDNRLT 701
              LS +  K N +T
Sbjct: 453 FCSLSLKGVKPNVVT 467



 Score =  177 bits (448), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 185/369 (50%), Gaps = 2/369 (0%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           +   ++ S  +   + +A+ +  EM  +G+ PN  T + ++   C  G    A  L  +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
             + ++P+  ++  ++ A+ K G  +EA+K    M+ R    D  ++  +I+ FC     
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
            +A + F         P+L  + ++I+G CK   ++   E+  EM  +G   +  T+T L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           I GL   G  + A ++F ++V S+   P+++TY+ +++G C + KL +A  +   M++  
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMV-SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           +  +   YTT+I+G CKAG  +  +DL   +S +G  PN+ TYN ++ GLC K  +QEAY
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
            +LK    +G   D  TYN LI  H +  D   +  L  +M       D  S   L+A  
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD-ASTIGLVANM 544

Query: 507 CREKRMSES 515
             + R+ +S
Sbjct: 545 LHDGRLDKS 553



 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 3/176 (1%)

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           M KS   P I  +  L++   + K+        E+  R G      TY  +I  +CR   
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 547 LTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRIT 606
           +++A+    +M   G  P  +   +L++G C   ++ +A  L D M+E G  P  +T  T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 607 LAYEYCKIDDCCSAMVILDRLEKK---LWIRTATTLVRKLCSERKVGMAALFFHKL 659
           L +     +    A+ ++DR+ ++     + T   +V  LC    + +A    +K+
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176


>AT1G31840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:11424006-11426528 FORWARD
           LENGTH=840
          Length = 840

 Score =  219 bits (557), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 237/504 (47%), Gaps = 4/504 (0%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           G  PN  T   ++   C+ G +D A  LF+ M  RG+ PD  +Y  ++  Y K G +   
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
            K  S  L +G  +D   F+  I  + + G    A   + +    G+ PN++ +T +I+G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
           LC+ G I +AF M  +++ +G +P++ T+++LIDG CK G     F L+  +++     P
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM-GYPP 459

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           +V+ Y  +++G  +   +  A     +M  Q +  N   + +LIDG C+   F+ A  + 
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
            LM   G  P++ T+  ++     +GR++EA  +    F  GLE D + Y  LI   CK 
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
                 L LF  M ++ I  DI     +I +  +  R+ ++  FF   +     P   TY
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
            +MICGYC    L  A + F  +      P+++    LI  LCK + +D A  ++  M E
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699

Query: 595 KGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK---LWIRTATTLVRKLCSERKVGM 651
           KG  P  VT   L   + K  D   +  + + +++K     I + + ++  LC   +V  
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 759

Query: 652 AALFFHKLLDMDFHVNRVTLAAFM 675
           A   FH+ +D     + V  A  +
Sbjct: 760 ATNIFHQAIDAKLLPDVVAYAILI 783



 Score =  210 bits (534), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 249/513 (48%), Gaps = 4/513 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F + G +  A ++   M  +G+ P+    + ++    + G++     LF +   +G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V  D   +   +  Y K G++  A      ML +G   +  ++T++I   C+ G    A 
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             + +    G++P+++ ++S+I+G CK G+++  F + E+M+  G+ P+V  +  L+DGL
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K+G    A R  +K++  ++ + NV+ + ++I+G+CR ++ + A  +   M   G+ P+
Sbjct: 472 SKQGLMLHAMRFSVKML-GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             T+TT++      G  E A  L   M + G  P+   Y  ++D  CK  +     ++  
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
               N + AD    N++I    K   I+ A   F+ + +  ++PDI +Y T+I  +C  +
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           R+ E+E  FE      F P   T T +I   C+  ++  AI+ F  M++ G  P+++ YG
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDR-LEK 629
            L+    K   ++ +  L++ M EKG+ P  V+   +    CK      A  I  + ++ 
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770

Query: 630 KLW--IRTATTLVRKLCSERKVGMAALFFHKLL 660
           KL   +     L+R  C   ++  AAL +  +L
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 803



 Score =  201 bits (512), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 255/546 (46%), Gaps = 22/546 (4%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           +M+C  R     G + +A+E+       G+V    ++  ++        VD     F+++
Sbjct: 152 LMECCCR----YGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKL 207

Query: 207 SARGVHPDSASYR--VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKG 264
              G+ P   S    V+   +CK G V +A  +  ++++RGF V   S   ++     KG
Sbjct: 208 CRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVL-----KG 261

Query: 265 FATR----ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNV 320
            +      A R      D G  PN++ F ++I G CKRG + +AF++ + M  +G +P++
Sbjct: 262 LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321

Query: 321 YTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG 380
             ++ LIDG  K G      +LF + +  +  K +V+ +++ I+ Y +   L  A ++  
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALH-KGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380

Query: 381 RMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
           RM  QG+ PN  TYT LI G C+ G    AF +   + + G  P+I TY++++DG CK G
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
            ++  + + +D    G   D V Y +L+    KQ  +  A+    KM    I+ ++  + 
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
           +LI  +CR  R  E+   F     +G  P   T+T+++     EG L  A+  F RM   
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSM----IEKGLIPCEVTRITLAYEYCKIDD 616
           G  PD++AY TLI   CK  K      L+D M    I   +  C V  I L ++  +I+D
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV-IHLLFKCHRIED 619

Query: 617 CCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMT 676
                  L   + +  I T  T++   CS R++  A   F  L    F  N VTL   + 
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679

Query: 677 ACYESN 682
              ++N
Sbjct: 680 VLCKNN 685



 Score =  174 bits (440), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 197/456 (43%), Gaps = 36/456 (7%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V    +  + + G L  A  +   M  QG+ PN  T  +++K  C+ G +  A  ++ ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
             RG+ P   +Y  ++  +CK GN+         M+  G+  D   + +++    ++G  
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             A+R+  K     ++ N++ F S+I+G C+     +A ++   M   G KP+V T T +
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK--------------- 371
           +     +G  E+A  LF ++ +    +P+ L Y  +I+ +C+  K               
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKM-GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596

Query: 372 --------------------LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAF 411
                               +  A      + E  + P+  TY T+I G+C     + A 
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656

Query: 412 DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEH 471
            +  L+    F PN  T   ++  LCK   +  A +M       G + + VTY  L+   
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716

Query: 472 CKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTK 531
            K  DI+ +  LF +M + GI P I SY+ +I   C+  R+ E+   F +A+    +P  
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776

Query: 532 RTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
             Y  +I GYC+ G L  A   +  M  +G  PD +
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812


>AT1G62720.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr1:23227574-23229031 FORWARD
           LENGTH=485
          Length = 485

 Score =  219 bits (557), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 224/439 (51%), Gaps = 4/439 (0%)

Query: 161 LKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRV 220
           L+E +++  +M     +P+    + V+    +    D    LF  M   G+  D  SY +
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           ++   C+    + A   +  M+  G+  D  + + +I+ FC+      A+    K  +MG
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF 340
            +P+++ + ++I+G CK G +  A E+ + M   G + +  T+ +L+ GLC  G    A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 341 RLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDG 400
           RL   +V   +  PNV+T+TA+I+ + ++ K + A  L   M  + + P+  TY +LI+G
Sbjct: 230 RLMRDMVM-RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288

Query: 401 HCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEAD 460
            C  G  + A  +++LM  +G  P++ TYN +++G CK  RV E  K+ ++    GL  D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348

Query: 461 KVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFE 520
            +TYN +I  + +      A  +FS+M     +P+I +Y+ L+   C   R+ ++ + FE
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFE 405

Query: 521 EAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQS 580
              +        TY  +I G C+ GN+  A   F  +S  G  PD ++Y T+ISG C++ 
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR 465

Query: 581 KLDEARGLYDSMIEKGLIP 599
           + D++  LY  M E GL+P
Sbjct: 466 QWDKSDLLYRKMQEDGLLP 484



 Score =  201 bits (510), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 208/390 (53%), Gaps = 8/390 (2%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
           +L   + V+ C+ R      R   A+ +V +M   G  P+  T++ ++   C+   V  A
Sbjct: 103 DLYSYNIVINCLCRC----SRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
             L  +M   G  PD   Y  ++   CK+G V +A +    M   G   D  ++  +++ 
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
            C  G  + A R         + PN+I FT++I+   K G   +A ++ EEM  +   P+
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
           V+T+ +LI+GLC  G  ++A +  L L+ ++   P+V+TY  +ING+C+  +++    L 
Sbjct: 279 VFTYNSLINGLCMHGRVDEA-KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
             M ++GL+ +T TY T+I G+ +AG  + A     + SR    PNI TY+ ++ GLC  
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAA---QEIFSRMDSRPNIRTYSILLYGLCMN 394

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
            RV++A  + ++   + +E D  TYNI+I   CK  +++ A  LF  ++  G++PD+ SY
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
           TT+I+ FCR+++  +S++ + +    G +P
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  191 bits (484), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 183/365 (50%), Gaps = 4/365 (1%)

Query: 249 DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           D  S+ ++I+  C       AL    K    G +P+++  +S+I G C+   +  A +++
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162

Query: 309 EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR 368
            +M   G++P+V  +  +IDG CK G    A  LF ++ R +  + + +TY +++ G C 
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER-DGVRADAVTYNSLVAGLCC 221

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
             + + A  L+  M  + ++PN  T+T +ID   K G F  A  L   M+R    P++ T
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           YN++++GLC  GRV EA +ML      G   D VTYN LI+  CK   + +   LF +MA
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
           + G+  D  +Y T+I  + +  R   ++  F    R    P  RTY+ ++ G C    + 
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVE 398

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
            A+  F  M       D   Y  +I G+CK   +++A  L+ S+  KGL P  V+  T+ 
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458

Query: 609 YEYCK 613
             +C+
Sbjct: 459 SGFCR 463



 Score =  177 bits (448), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 161/316 (50%)

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           ++ +Y  +IN  CR  +   A  ++G+M + G  P+  T ++LI+G C+      A DL+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
           + M   GF P++  YN I+DG CK G V +A ++      +G+ AD VTYN L++  C  
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
                A  L   M    I P++ ++T +I VF +E + SE+   +EE  R    P   TY
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
            S+I G C  G +  A +    M   GC+PD + Y TLI+G CK  ++DE   L+  M +
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342

Query: 595 KGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAAL 654
           +GL+   +T  T+   Y +     +A  I  R++ +  IRT + L+  LC   +V  A +
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALV 402

Query: 655 FFHKLLDMDFHVNRVT 670
            F  +   +  ++  T
Sbjct: 403 LFENMQKSEIELDITT 418



 Score =  175 bits (444), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 215/439 (48%), Gaps = 20/439 (4%)

Query: 233 EADKWLSV-MLDRGFLVDNASFTLIISEFCEKGFATR--------ALRYFHKFSDMGLKP 283
           +A+K+L++ +L +G    N      IS F  + F+T+         +  F K       P
Sbjct: 12  KANKFLNLCLLQKG----NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLP 67

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF 343
           ++++F+ ++  + K  +      +   M   G   ++Y++  +I+ LC+      A  + 
Sbjct: 68  SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK 403
            K+++    +P+V+T +++ING+C+ +++  A  L+ +M+E G  P+   Y T+IDG CK
Sbjct: 128 GKMMKF-GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186

Query: 404 AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
            G    A +L + M R+G   +  TYN++V GLC  GR  +A ++++D     +  + +T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
           +  +I    K+    +A+ L+ +M +  + PD+ +Y +LI   C   R+ E++   +  V
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306

Query: 524 RFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
             G +P   TY ++I G+C+   +    K F  M+  G V D+I Y T+I G  +  + D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366

Query: 584 EARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK---KLWIRTATTLV 640
            A+ ++  M  +   P   T   L Y  C       A+V+ + ++K   +L I T   ++
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423

Query: 641 RKLCSERKVGMAALFFHKL 659
             +C    V  A   F  L
Sbjct: 424 HGMCKIGNVEDAWDLFRSL 442


>AT1G63150.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:23419399-23421288 FORWARD
           LENGTH=629
          Length = 629

 Score =  219 bits (557), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 137/550 (24%), Positives = 262/550 (47%), Gaps = 2/550 (0%)

Query: 111 FFHWAI-GYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVF 169
           F HW + G          + +C +          + +  + +    ++I ++ +AV++  
Sbjct: 13  FVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFG 72

Query: 170 EMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMG 229
           +M      P+    N ++    +M   +    L E+M   G+  D  +Y + +  +C+  
Sbjct: 73  DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132

Query: 230 NVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFT 289
            +  A   L+ M+  G+  D  + + +++ +C     + A+    +  +MG KP+   FT
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192

Query: 290 SMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
           ++I GL       +A  ++++MV +G +P++ T+  +++GLCK+G  + A  L  K+  +
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EA 251

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
              K NV+ +  +I+  C+   +  A  L   M+ +G+ PN  TY +LI+  C  G +  
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311

Query: 410 AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILIS 469
           A  L++ M  +  +PN+ T+NA++D   K+G++ EA K+ ++     ++ D +TYN+LI+
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371

Query: 470 EHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
             C    + +A  +F  M      P+I +Y TLI  FC+ KR+ +    F E  + G + 
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431

Query: 530 TKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLY 589
              TYT++I G+ + G+   A   F +M  +    D + Y  L+ GLC   KLD A  ++
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491

Query: 590 DSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKV 649
             + +  +        T+    CK      A  +   L  K  + T  T++  LCS+R +
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLL 551

Query: 650 GMAALFFHKL 659
             A   F K+
Sbjct: 552 QEADDLFRKM 561



 Score =  209 bits (531), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 236/488 (48%), Gaps = 4/488 (0%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           +  F    +L  A+ ++ +M   G  P+  TL+ ++   C    +  A  L ++M   G 
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            PD+ ++  ++          EA   +  M+ RG   D  ++  +++  C++G    AL 
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
             +K     +K N++ F ++I+ LCK   ++ A ++  EM  +G +PNV T+ +LI+ LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
             G    A RL   ++  + N PNV+T+ A+I+ + ++ KL  AE L   M ++ + P+T
Sbjct: 305 NYGRWSDASRLLSNMLEKKIN-PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
            TY  LI+G C     + A  +   M  +   PNI TYN +++G CK  RV++  ++ ++
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
               GL  + VTY  +I    +  D   A  +F +M  + +  DI +Y+ L+   C   +
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
           +  + + F+   +         Y +MI G C+ G +  A   F  +S     PD + Y T
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNT 540

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKL 631
           +ISGLC +  L EA  L+  M E G +P   T  TL     +  D  ++  ++  +    
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600

Query: 632 WIRTATTL 639
           ++  A+T+
Sbjct: 601 FVGDASTI 608



 Score =  200 bits (508), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 205/427 (48%), Gaps = 6/427 (1%)

Query: 148 MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS 207
           +  ++  +    R+ +AV +V +M   G  P+T T   ++           A  L ++M 
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
            RG  PD  +Y  +V   CK G++  A   L+ M       +   F  II   C+     
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
            A+  F +    G++PN++ + S+I  LC  G    A  +L  M+ +   PNV T  ALI
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           D   K+G   +A +L  ++++   + P+ +TY  +ING+C  ++L+ A+ +   M  +  
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSID-PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
           +PN  TY TLI+G CK    E   +L   MS+ G   N  TY  I+ G  + G    A  
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           + K    N +  D +TY+IL+   C    +  AL +F  + KS ++ +I  Y T+I   C
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514

Query: 508 REKRMSES-EMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS 566
           +  ++ E+ ++F   +++    P   TY +MI G C +  L  A   F +M + G +P+S
Sbjct: 515 KAGKVGEAWDLFCSLSIK----PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570

Query: 567 IAYGTLI 573
             Y TLI
Sbjct: 571 GTYNTLI 577



 Score =  190 bits (483), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 198/397 (49%), Gaps = 4/397 (1%)

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
            +   +G+  +L  ++  I   C+R  +  A  +L +M+  G++P++ T ++L++G C  
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
                A  L  ++V     KP+  T+T +I+G    +K + A  L+ +M ++G  P+  T
Sbjct: 167 KRISDAVALVDQMVEM-GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           Y T+++G CK G+ + A +L+N M       N+  +N I+D LCK   V+ A  +  +  
Sbjct: 226 YGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
             G+  + VTYN LI+  C       A  L S M +  I P++ ++  LI  F +E ++ 
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           E+E   EE ++    P   TY  +I G+C    L  A + F  M    C+P+   Y TLI
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405

Query: 574 SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW- 632
           +G CK  ++++   L+  M ++GL+   VT  T+   + +  DC SA ++  ++      
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465

Query: 633 --IRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVN 667
             I T + L+  LCS  K+  A + F  L   +  +N
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502



 Score =  159 bits (401), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 179/369 (48%), Gaps = 5/369 (1%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           +   ++ S  +   ++ AV++  EM  +G+ PN  T N ++   C  G    A  L   M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
             + ++P+  ++  ++ A+ K G ++EA+K    M+ R    D  ++ L+I+ FC     
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             A + F         PN+  + ++I G CK   ++   E+  EM  +G   N  T+T +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           I G  + G  + A  +F ++V S     +++TY+ +++G C   KL+ A ++   +++  
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMV-SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           +  N   Y T+I+G CKAG    A+DL   +S     P++ TYN ++ GLC K  +QEA 
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEAD 555

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
            + +    +G   +  TYN LI  + +  D   +  L  +M  SG   D  S  +L+   
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD-ASTISLVTNM 614

Query: 507 CREKRMSES 515
             + R+ +S
Sbjct: 615 LHDGRLDKS 623


>AT1G09680.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:3134107-3135930 REVERSE
           LENGTH=607
          Length = 607

 Score =  218 bits (556), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 184/336 (54%), Gaps = 1/336 (0%)

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
           ++ +  D G   N+  F  ++   CK G+I  A ++ +E+  +  +P V +   LI+G C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
           K G  ++ FRL  ++ +S   +P+V TY+A+IN  C+++K++ A  L   M ++GLIPN 
Sbjct: 287 KVGNLDEGFRLKHQMEKSRT-RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
             +TTLI GH + G  +   +    M  +G  P+I  YN +V+G CK G +  A  ++  
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
               GL  DK+TY  LI   C+  D++ AL +  +M ++GI+ D   ++ L+   C+E R
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
           + ++E    E +R G  P   TYT M+  +C++G+     K    M   G VP  + Y  
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           L++GLCK  ++  A  L D+M+  G++P ++T  TL
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561



 Score =  202 bits (515), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 189/335 (56%), Gaps = 1/335 (0%)

Query: 241 MLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGS 300
           +LD GF ++   F +++++FC++G  + A + F + +   L+P +++F ++I G CK G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290

Query: 301 IKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYT 360
           + + F +  +M     +P+V+T++ALI+ LCK+   + A  LF ++ +     PN + +T
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK-RGLIPNDVIFT 349

Query: 361 AMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE 420
            +I+G+ R+ +++  +    +M  +GL P+   Y TL++G CK G+   A ++++ M R 
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409

Query: 421 GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
           G  P+  TY  ++DG C+ G V+ A ++ K+   NG+E D+V ++ L+   CK+  +  A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
                +M ++GI+PD  +YT ++  FC++          +E    G +P+  TY  ++ G
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529

Query: 541 YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
            C+ G +  A      M + G VPD I Y TL+ G
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564



 Score =  173 bits (438), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 180/369 (48%), Gaps = 4/369 (1%)

Query: 170 EMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMG 229
           E+ + G   N    N++M   C+ G +  AQ +F+E++ R + P   S+  ++  YCK+G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289

Query: 230 NVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFT 289
           N+ E  +    M       D  +++ +I+  C++     A   F +    GL PN + FT
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349

Query: 290 SMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
           ++I G  + G I    E  ++M+ +G +P++  +  L++G CK G    A  +   ++R 
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR- 408

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
              +P+ +TYT +I+G+CR   +  A  +   M + G+  +   ++ L+ G CK G    
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468

Query: 410 AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILIS 469
           A   +  M R G  P+  TY  ++D  CKKG  Q  +K+LK+   +G     VTYN+L++
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLN 528

Query: 470 EHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
             CK   +K A  L   M   G+ PD  +Y TL+       R + S   + +    G + 
Sbjct: 529 GLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE---GHHRHANSSKRYIQKPEIGIVA 585

Query: 530 TKRTYTSMI 538
              +Y S++
Sbjct: 586 DLASYKSIV 594



 Score =  171 bits (433), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 184/369 (49%), Gaps = 12/369 (3%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   ++  F + G + +A ++  E+  + + P   + N ++   C++G +D    L  +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
                 PD  +Y  ++ A CK   +  A      M  RG + ++  FT +I      G  
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
                 + K    GL+P+++ + +++ G CK G +  A  +++ M+ +G +P+  T+T L
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNV----LTYTAMINGYCRDDKLNRAEMLLGRM 382
           IDG C+ G  E A       +R E ++  +    + ++A++ G C++ ++  AE  L  M
Sbjct: 422 IDGFCRGGDVETALE-----IRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
              G+ P+  TYT ++D  CK G+ +  F L+  M  +G  P++ TYN +++GLCK G++
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           + A  +L    + G+  D +TYN L+  H + A+  +    + +  + GI  D+ SY ++
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKR---YIQKPEIGIVADLASYKSI 593

Query: 503 IAVFCREKR 511
           +    R  +
Sbjct: 594 VNELDRASK 602



 Score =  163 bits (412), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 162/319 (50%), Gaps = 3/319 (0%)

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           NV  +  ++N +C++  ++ A+ +   + ++ L P   ++ TLI+G+CK GN +  F L 
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
           + M +    P++ TY+A+++ LCK+ ++  A+ +  +    GL  + V +  LI  H + 
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
            +I      + KM   G+QPDI  Y TL+  FC+   +  +    +  +R G  P K TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
           T++I G+CR G++  A++    M  +G   D + +  L+ G+CK+ ++ +A      M+ 
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478

Query: 595 KGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKLCSERKVGM 651
            G+ P +VT   +   +CK  D  +   +L  ++    + +  T   L+  LC   ++  
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538

Query: 652 AALFFHKLLDMDFHVNRVT 670
           A +    +L++    + +T
Sbjct: 539 ADMLLDAMLNIGVVPDDIT 557



 Score =  143 bits (360), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 161/331 (48%), Gaps = 4/331 (1%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
           +LQ        ++  + ++G L E   +  +M      P+  T + ++   C+   +D A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
             LF+EM  RG+ P+   +  ++  + + G +    +    ML +G   D   +  +++ 
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
           FC+ G    A          GL+P+ I +T++I+G C+ G ++ A E+ +EM   G + +
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
               +AL+ G+CK+G    A R   +++R+   KP+ +TYT M++ +C+         LL
Sbjct: 450 RVGFSALVCGMCKEGRVIDAERALREMLRA-GIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
             M+  G +P+  TY  L++G CK G  + A  L++ M   G  P+  TYN +++G  + 
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRH 568

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISE 470
               + Y    +    G+ AD  +Y  +++E
Sbjct: 569 ANSSKRYIQKPE---IGIVADLASYKSIVNE 596



 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 134/260 (51%), Gaps = 3/260 (1%)

Query: 421 GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
           GF  N+  +N +++  CK+G + +A K+  +     L+   V++N LI+ +CK  ++ + 
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
             L  +M KS  +PD+ +Y+ LI   C+E +M  +   F+E  + G IP    +T++I G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354

Query: 541 YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC 600
           + R G + +  + + +M   G  PD + Y TL++G CK   L  AR + D MI +GL P 
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414

Query: 601 EVTRITLAYEYCKIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFH 657
           ++T  TL   +C+  D  +A+ I   +++   +L     + LV  +C E +V  A     
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474

Query: 658 KLLDMDFHVNRVTLAAFMTA 677
           ++L      + VT    M A
Sbjct: 475 EMLRAGIKPDDVTYTMMMDA 494



 Score =  108 bits (271), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 6/245 (2%)

Query: 371 KLNRAEMLLG---RMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC 427
           KLN    + G    + + G   N   +  L++  CK GN   A  + + +++    P + 
Sbjct: 217 KLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVV 276

Query: 428 TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM 487
           ++N +++G CK G + E +++      +    D  TY+ LI+  CK+  +  A  LF +M
Sbjct: 277 SFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM 336

Query: 488 AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNL 547
            K G+ P+   +TTLI    R   +   +  +++ +  G  P    Y +++ G+C+ G+L
Sbjct: 337 CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396

Query: 548 TMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
             A      M   G  PD I Y TLI G C+   ++ A  +   M + G+   E+ R+  
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI---ELDRVGF 453

Query: 608 AYEYC 612
           +   C
Sbjct: 454 SALVC 458



 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 75/132 (56%)

Query: 482 ALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGY 541
             + ++  +G   +++ +  L+  FC+E  +S+++  F+E  +    PT  ++ ++I GY
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGY 285

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCE 601
           C+ GNL    +  H+M      PD   Y  LI+ LCK++K+D A GL+D M ++GLIP +
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345

Query: 602 VTRITLAYEYCK 613
           V   TL + + +
Sbjct: 346 VIFTTLIHGHSR 357


>AT1G06710.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:2056999-2060242 REVERSE
           LENGTH=997
          Length = 997

 Score =  218 bits (556), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 238/515 (46%), Gaps = 39/515 (7%)

Query: 157 EIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSA 216
           ++GR K  + M   M  +G  P+ +  N ++   C  G   YA  L ++M   G  P   
Sbjct: 352 QLGRCKRVLNM---MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408

Query: 217 SYRVMVVAYCKMGNVLE------ADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
            Y +++ + C   + L       A+K  S ML  G +++  + +      C  G   +A 
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +    G  P+   ++ ++  LC    ++ AF + EEM   G   +VYT+T ++D  
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK G  E+A + F ++ R     PNV+TYTA+I+ Y +  K++ A  L   M  +G +PN
Sbjct: 529 CKAGLIEQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLM----------------SREGFSPNICTYNAIVD 434
             TY+ LIDGHCKAG  E+A  +   M                      PN+ TY A++D
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647

Query: 435 GLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP 494
           G CK  RV+EA K+L      G E +++ Y+ LI   CK   + +A  + ++M++ G   
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707

Query: 495 DIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFF 554
            +++Y++LI  + + KR   +     + +     P    YT MI G C+ G    A K  
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767

Query: 555 HRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKI 614
             M + GC P+ + Y  +I G     K++    L + M  KG+ P  VT   L      I
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL------I 821

Query: 615 DDCCS------AMVILDRLEKKLWIRTATTLVRKL 643
           D CC       A  +L+ +++  W  T T   RK+
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHW-PTHTAGYRKV 855



 Score =  210 bits (535), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 237/525 (45%), Gaps = 89/525 (16%)

Query: 153 RSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVH 212
           R     G+ ++A  ++ EM  QG +P+T T + V+   C    ++ A  LFEEM   G+ 
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515

Query: 213 PDSASYRVMVVAYCKMGNVLEADKWLS--------------------------------- 239
            D  +Y +MV ++CK G + +A KW +                                 
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 240 --VMLDRGFLVDNASFTLIISEFCEKGFATRALR----------------YFHKFSDMGL 281
              ML  G L +  +++ +I   C+ G   +A +                YF ++ D   
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635

Query: 282 KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFR 341
           +PN++ + ++++G CK   +++A ++L+ M  +G +PN   + ALIDGLCK G  ++A  
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 342 LFLKLVRSENNKPNVL-TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDG 400
           +  K   SE+  P  L TY+++I+ Y +  + + A  +L +M E    PN   YT +IDG
Sbjct: 696 V--KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG 753

Query: 401 HCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEAD 460
            CK G  + A+ LM +M  +G  PN+ TY A++DG    G+++   ++L+     G+  +
Sbjct: 754 LCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813

Query: 461 KVTYNILISEHCKQA----------DIKQ-----------------------ALALFSKM 487
            VTY +LI   CK            ++KQ                       +L L  ++
Sbjct: 814 YVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873

Query: 488 AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG--FIPTKRTYTSMICGYCREG 545
            +    P +  Y  LI    + +R+  +    EE   F    +    TY S+I   C   
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933

Query: 546 NLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD 590
            +  A + F  M+  G +P+  ++ +LI GL + SK+ EA  L D
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978



 Score =  200 bits (509), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 218/469 (46%), Gaps = 23/469 (4%)

Query: 146 EVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIAC------EMGLVDYA 199
           ++   +V ++   G    A +++ +M   G +P     N+++   C         L+D A
Sbjct: 373 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLA 432

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
           +  + EM A GV  +  +        C  G   +A   +  M+ +GF+ D ++++ +++ 
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
            C       A   F +    GL  ++  +T M++  CK G I+QA +   EM   G  PN
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
           V T+TALI    K      A  LF  ++ SE   PN++TY+A+I+G+C+  ++ +A  + 
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETML-SEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611

Query: 380 GRM----------------KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS 423
            RM                 +    PN  TY  L+DG CK+   E A  L++ MS EG  
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671

Query: 424 PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALAL 483
           PN   Y+A++DGLCK G++ EA ++  +   +G  A   TY+ LI  + K      A  +
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731

Query: 484 FSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCR 543
            SKM ++   P++  YT +I   C+  +  E+    +     G  P   TYT+MI G+  
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791

Query: 544 EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
            G +   ++   RM   G  P+ + Y  LI   CK   LD A  L + M
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840



 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 190/473 (40%), Gaps = 63/473 (13%)

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
             +++ + C  G  + AL    +  D   +P+   +  +I+   K   +  A  +  EM 
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262

Query: 313 CQGWKPNVYTHTALIDGLCKKG-WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK 371
               + + +T       LCK G W E      L LV +EN  P+ + YT +I+G C    
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREA-----LTLVETENFVPDTVFYTKLISGLCEASL 317

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
              A   L RM+    +PN  TY+TL+ G        R   ++N+M  EG  P+   +N+
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377

Query: 432 IVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD--------------- 476
           +V   C  G    AYK+LK     G     V YNILI   C   D               
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437

Query: 477 --------------------------IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                                      ++A ++  +M   G  PD  +Y+ ++   C   
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           +M  + + FEE  R G +    TYT M+  +C+ G +  A K+F+ M + GC P+ + Y 
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
            LI    K  K+  A  L+++M+ +G +P  VT   L   +CK                 
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ-------------- 603

Query: 631 LWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
             +  A  +  ++C  + V    ++F +  D     N VT  A +    +S++
Sbjct: 604 --VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654



 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 197/449 (43%), Gaps = 87/449 (19%)

Query: 129 IVCATSLIGN----GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMV-PNTQTL 183
           IV  ++LI      G ++KA ++ + M  S     +    V+M F+ ++     PN  T 
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGS-----KDVPDVDMYFKQYDDNSERPNVVTY 642

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
             ++   C+   V+ A+ L + MS  G  P+   Y  ++   CK+G + EA +  + M +
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ 303
            GF     +++ +I  + +      A +   K  +    PN++ +T MI+GLCK G   +
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762

Query: 304 AFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMI 363
           A+++++ M  +G +PNV T+TA+IDG    G  E    L L+ + S+   PN +TY  +I
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL-LERMGSKGVAPNYVTYRVLI 821

Query: 364 NGYCRDDKLNRAEMLLGRMKEQ------------------------GLI---------PN 390
           +  C++  L+ A  LL  MK+                         GL+         P 
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPF 881

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC----TYNAIVDGLCKKGRVQEAY 446
            + Y  LID   KA   E A  L+  ++   FS  +     TYN++++ LC   +V+ A+
Sbjct: 882 LSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSATLVDYSSTYNSLIESLCLANKVETAF 939

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
           +                                   LFS+M K G+ P++ S+ +LI   
Sbjct: 940 Q-----------------------------------LFSEMTKKGVIPEMQSFCSLIKGL 964

Query: 507 CREKRMSESEMF--FEEAVRFGFIPTKRT 533
            R  ++SE+ +   F   +   +I  K+T
Sbjct: 965 FRNSKISEALLLLDFISHMEIQWIEEKKT 993


>AT2G16880.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:7312262-7314493 REVERSE
           LENGTH=743
          Length = 743

 Score =  218 bits (555), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 265/550 (48%), Gaps = 30/550 (5%)

Query: 76  PRLHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSL 135
           P LHLS  P     + A+   ++        VAL  F   I   R +    L + C T L
Sbjct: 121 PNLHLSPPPSKALFDIAL---SAYLHEGKPHVALQIFQKMI---RLKLKPNL-LTCNTLL 173

Query: 136 IG------NGNLQKAHEVMQCMVRSFAEI---------------GRLKEAVEMVFEMHNQ 174
           IG      + ++  A EV   MV+    +               G+L++A+ M+  M ++
Sbjct: 174 IGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE 233

Query: 175 GMV-PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLE 233
             V P+  T N ++K   + G +   + L  +M   G+ P+  +Y  +V  YCK+G++ E
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293

Query: 234 ADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIE 293
           A + + +M     L D  ++ ++I+  C  G     L        + L+P+++ + ++I+
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353

Query: 294 GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
           G  + G   +A +++E+M   G K N  TH   +  LCK+   E   R   +LV      
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           P+++TY  +I  Y +   L+ A  ++  M ++G+  NT T  T++D  CK    + A +L
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
           +N   + GF  +  TY  ++ G  ++ +V++A +M  +     +     T+N LI   C 
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
               + A+  F ++A+SG+ PD  ++ ++I  +C+E R+ ++  F+ E+++  F P   T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593

Query: 534 YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
              ++ G C+EG    A+ FF+ + +   V D++ Y T+IS  CK  KL EA  L   M 
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEME 652

Query: 594 EKGLIPCEVT 603
           EKGL P   T
Sbjct: 653 EKGLEPDRFT 662



 Score =  194 bits (492), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 214/417 (51%), Gaps = 9/417 (2%)

Query: 251 ASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGS---IKQAFEM 307
           A F + +S +  +G    AL+ F K   + LKPNL+   +++ GL +  S   I  A E+
Sbjct: 132 ALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREV 191

Query: 308 LEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYC 367
            ++MV  G   NV T   L++G C +G  E A  +  ++V      P+ +TY  ++    
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS 251

Query: 368 RDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC 427
           +  +L+  + LL  MK+ GL+PN  TY  L+ G+CK G+ + AF ++ LM +    P++C
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311

Query: 428 TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK-QALALFSK 486
           TYN +++GLC  G ++E  +++       L+ D VTYN LI + C +  +  +A  L  +
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI-DGCFELGLSLEARKLMEQ 370

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRF-GFIPTKRTYTSMICGYCREG 545
           M   G++ +  ++   +   C+E++        +E V   GF P   TY ++I  Y + G
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430

Query: 546 NLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRI 605
           +L+ A++    M   G   ++I   T++  LCK+ KLDEA  L +S  ++G I  EVT  
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYG 490

Query: 606 TLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKLCSERKVGMAALFFHKL 659
           TL   + + +    A+ + D ++K     T +T   L+  LC   K  +A   F +L
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547



 Score =  184 bits (468), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 220/465 (47%), Gaps = 26/465 (5%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V  + ++G LKEA ++V  M    ++P+  T N+++   C  G +     L + M +  
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD  +Y  ++    ++G  LEA K +  M + G   +  +  + +   C++       
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400

Query: 271 RYFHKFSDM-GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           R   +  DM G  P+++ + ++I+   K G +  A EM+ EM  +G K N  T   ++D 
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
           LCK+   ++A  L L          + +TY  +I G+ R++K+ +A  +   MK+  + P
Sbjct: 461 LCKERKLDEAHNL-LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
             +T+ +LI G C  G  E A +  + ++  G  P+  T+N+I+ G CK+GRV++A++  
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFY 579

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
            +   +  + D  T NIL++  CK+   ++AL  F+ + +   + D  +Y T+I+ FC++
Sbjct: 580 NESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKD 638

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM------------ 557
           K++ E+     E    G  P + TY S I     +G L+   +   +             
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQ 698

Query: 558 -----------SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
                      S      ++IAY  +I  LC + +L E    Y S
Sbjct: 699 VETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYTS 743



 Score =  132 bits (333), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 169/360 (46%), Gaps = 11/360 (3%)

Query: 333 KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR---DDKLNRAEMLLGRMKEQGLIP 389
           +G    A ++F K++R +  KPN+LT   ++ G  R      ++ A  +   M + G+  
Sbjct: 144 EGKPHVALQIFQKMIRLKL-KPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSL 202

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSRE-GFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           N  T+  L++G+C  G  E A  ++  M  E   +P+  TYN I+  + KKGR+ +  ++
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
           L D   NGL  ++VTYN L+  +CK   +K+A  +   M ++ + PD+ +Y  LI   C 
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCN 322

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTM-AIKFFHRMSDHGCVPDSI 567
              M E     +        P   TY ++I G C E  L++ A K   +M + G   + +
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQV 381

Query: 568 AYGTLISGLCKQSKLDEARGLYDSMIE-KGLIPCEVTRITLAYEYCKIDDCCSAMVILDR 626
            +   +  LCK+ K +        +++  G  P  VT  TL   Y K+ D   A+ ++  
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441

Query: 627 L-EKKLWIRTAT--TLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
           + +K + + T T  T++  LC ERK+  A    +      F V+ VT    +   +   K
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501



 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 108/240 (45%), Gaps = 7/240 (2%)

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           +L    H      K  ++I +S +  +     AL +F KM +  ++P++ +  TL+    
Sbjct: 118 LLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177

Query: 508 REK---RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM-SDHGCV 563
           R      +S +   F++ V+ G     +T+  ++ GYC EG L  A+    RM S+    
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVN 237

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVI 623
           PD++ Y T++  + K+ +L + + L   M + GL+P  VT   L Y YCK+     A  I
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297

Query: 624 LDRLEKKLWIR---TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYE 680
           ++ +++   +    T   L+  LC+   +         +  +    + VT    +  C+E
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357


>AT1G62590.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr1:23177294-23179198 REVERSE LENGTH=634
          Length = 634

 Score =  218 bits (554), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 238/489 (48%), Gaps = 1/489 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F    ++  A+ ++ +M   G  P+  TL+ ++   C    +  A  L ++M   G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD+ ++  ++          EA   +  M+ RG   +  ++ ++++  C++G    AL
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
              +K     ++ +++ F ++I+ LCK   +  A  + +EM  +G +PNV T+++LI  L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C  G    A +L   ++  + N PN++T+ A+I+ + ++ K   AE L   M ++ + P+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY +L++G C     ++A  +   M  +   P++ TYN ++ G CK  RV++  ++ +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +  H GL  D VTY  LI       D   A  +F +M   G+ PDI +Y+ L+   C   
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           ++ ++   F+   +         YT+MI G C+ G +      F  +S  G  P+ + Y 
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           T+ISGLC +  L EA  L   M E G +P   T  TL   + +  D  ++  ++  +   
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSC 604

Query: 631 LWIRTATTL 639
            ++  A+T+
Sbjct: 605 RFVGDASTI 613



 Score =  216 bits (550), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 245/504 (48%), Gaps = 6/504 (1%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +L +A+ +   M     +P+    N ++    +M   D    L E+M    +     +Y 
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++  +C+   +  A   L  M+  G+     + + +++ +C     + A+    +  +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G +P+ I FT++I GL       +A  +++ MV +G +PN+ T+  +++GLCK+G T+ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             L  K+  +   + +V+ +  +I+  C+   ++ A  L   M+ +G+ PN  TY++LI 
Sbjct: 245 LNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
             C  G +  A  L++ M  +  +PN+ T+NA++D   K+G+  EA K+  D     ++ 
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D  TYN L++  C    + +A  +F  M      PD+ +Y TLI  FC+ KR+ +    F
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            E    G +    TYT++I G   +G+   A K F +M   G  PD + Y  L+ GLC  
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITLAYE-YC---KIDDCCSAMVILDRLEKKLWIRT 635
            KL++A  ++D M +K  I  ++   T   E  C   K+DD       L     K  + T
Sbjct: 484 GKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542

Query: 636 ATTLVRKLCSERKVGMAALFFHKL 659
             T++  LCS+R +  A     K+
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKM 566



 Score =  209 bits (533), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 218/462 (47%), Gaps = 1/462 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ + A++ +    + +  +M    +V    T N+++   C    +  A  L  +M   G
Sbjct: 91  LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 150

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P   +   ++  YC    + +A   +  M++ G+  D  +FT +I        A+ A+
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +    G +PNL+ +  ++ GLCKRG    A  +L +M     + +V     +ID L
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK    + A  LF K + ++  +PNV+TY+++I+  C   + + A  LL  M E+ + PN
Sbjct: 271 CKYRHVDDALNLF-KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             T+  LID   K G F  A  L + M +    P+I TYN++V+G C   R+ +A +M +
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                    D VTYN LI   CK   ++    LF +M+  G+  D  +YTTLI     + 
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
               ++  F++ V  G  P   TY+ ++ G C  G L  A++ F  M       D   Y 
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYC 612
           T+I G+CK  K+D+   L+ S+  KG+ P  VT  T+    C
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551



 Score =  196 bits (499), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 216/426 (50%), Gaps = 2/426 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +  EAV +V  M  +G  PN  T  +V+   C+ G  D A  L  +M A  +  D   + 
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            ++ + CK  +V +A      M  +G   +  +++ +IS  C  G  + A +      + 
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
            + PNL+ F ++I+   K G   +A ++ ++M+ +   P+++T+ +L++G C     +KA
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            ++F  +V S++  P+V+TY  +I G+C+  ++     L   M  +GL+ +T TYTTLI 
Sbjct: 385 KQMFEFMV-SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G    G+ + A  +   M  +G  P+I TY+ ++DGLC  G++++A ++      + ++ 
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D   Y  +I   CK   +     LF  ++  G++P++ +Y T+I+  C ++ + E+    
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
           ++    G +P   TY ++I  + R+G+   + +    M     V D+   G L++ +   
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHD 622

Query: 580 SKLDEA 585
            +LD++
Sbjct: 623 GRLDKS 628



 Score =  185 bits (470), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 203/424 (47%), Gaps = 8/424 (1%)

Query: 285 LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 344
           L  +  +I   C+R  I  A  +L +M+  G++P++ T ++L++G C       A  L  
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
           ++V     +P+ +T+T +I+G    +K + A  L+ RM ++G  PN  TY  +++G CK 
Sbjct: 180 QMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G+ + A +L+N M       ++  +N I+D LCK   V +A  + K+    G+  + VTY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           + LIS  C       A  L S M +  I P++ ++  LI  F +E +  E+E  +++ ++
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
               P   TY S++ G+C    L  A + F  M    C PD + Y TLI G CK  ++++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418

Query: 585 ARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW---IRTATTLVR 641
              L+  M  +GL+   VT  TL        DC +A  +  ++        I T + L+ 
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478

Query: 642 KLCSERKVGMAALFFHKL----LDMDFHVNRVTLAAFMTACYESNKYALVSDLSARIYKD 697
            LC+  K+  A   F  +    + +D ++    +     A    + + L   LS +  K 
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538

Query: 698 NRLT 701
           N +T
Sbjct: 539 NVVT 542



 Score =  175 bits (444), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 186/369 (50%), Gaps = 2/369 (0%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           +   ++ S  +   + +A+ +  EM  +G+ PN  T + ++   C  G    A  L  +M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
             + ++P+  ++  ++ A+ K G  +EA+K    M+ R    D  ++  +++ FC     
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
            +A + F         P+++ + ++I+G CK   ++   E+  EM  +G   +  T+T L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           I GL   G  + A ++F ++V S+   P+++TY+ +++G C + KL +A  +   M++  
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMV-SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           +  +   YTT+I+G CKAG  +  +DL   +S +G  PN+ TYN ++ GLC K  +QEAY
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
            +LK    +G   +  TYN LI  H +  D   +  L  +M       D  S   L+A  
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD-ASTIGLVANM 619

Query: 507 CREKRMSES 515
             + R+ +S
Sbjct: 620 LHDGRLDKS 628



 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 1/274 (0%)

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y  ++     D KL+ A  L G M +   +P+   +  L+    K   F+    L   M 
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
           R      + TYN +++  C++ ++  A  +L      G E   VT + L++ +C    I 
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
            A+AL  +M + G +PD  ++TTLI       + SE+    +  V+ G  P   TY  ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
            G C+ G+  +A+   ++M       D + + T+I  LCK   +D+A  L+  M  KG+ 
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292

Query: 599 PCEVTRITLAYEYCKIDDCCSAMVIL-DRLEKKL 631
           P  VT  +L    C       A  +L D +EKK+
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326


>AT1G52620.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:19603828-19606287 FORWARD
           LENGTH=819
          Length = 819

 Score =  218 bits (554), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 256/552 (46%), Gaps = 19/552 (3%)

Query: 119 SRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEM---VFEMHNQG 175
           +R+R F  +  V     + N N++  HE +  ++ ++AE G L +AVE+   V E+++  
Sbjct: 110 ARYRIFNEIEDVLGN--LRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDS- 166

Query: 176 MVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEAD 235
            VP+    N ++ +  +   +  A+ +++EM  RG   D+ S  ++V   C  G V    
Sbjct: 167 -VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGR 225

Query: 236 KWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
           K +     +G + +   +  II  +C+ G    A   F +    G  P L  F +MI G 
Sbjct: 226 KLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGF 285

Query: 296 CKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPN 355
           CK G    +  +L E+  +G + +V+    +ID   + G+        +  + + + KP+
Sbjct: 286 CKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAE-SIGWIIANDCKPD 344

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
           V TY  +IN  C++ K   A   L    ++GLIPN  +Y  LI  +CK+  ++ A  L+ 
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404

Query: 416 LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQA 475
            M+  G  P+I TY  ++ GL   G + +A  M       G+  D   YN+L+S  CK  
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464

Query: 476 DIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYT 535
               A  LFS+M    I PD + Y TLI  F R     E+   F  +V  G       + 
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524

Query: 536 SMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
           +MI G+CR G L  A+   +RM++   VPD   Y T+I G  KQ  +  A  ++  M + 
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584

Query: 596 GLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR-------TATTLVRKLCSERK 648
              P  VT  +L   +C    C     + +   K++ +R       T TTL+R L  E  
Sbjct: 585 KCKPNVVTYTSLINGFC----CQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESS 640

Query: 649 VGMAALFFHKLL 660
               A+++ +L+
Sbjct: 641 TLEKAVYYWELM 652



 Score =  196 bits (498), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/549 (22%), Positives = 243/549 (44%), Gaps = 86/549 (15%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V+     G+++   +++     +G +PN    N ++   C++G ++ A  +F+E+  +G
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLV---------------------- 248
             P   ++  M+  +CK G+ + +D+ LS + +RG  V                      
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330

Query: 249 -------------DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
                        D A++ ++I+  C++G    A+ +  + S  GL PN +++  +I+  
Sbjct: 331 ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390

Query: 296 CKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPN 355
           CK      A ++L +M  +G KP++ T+  LI GL   G  + A  + +KL+      P+
Sbjct: 391 CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI-DRGVSPD 449

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
              Y  +++G C+  +   A++L   M ++ ++P+   Y TLIDG  ++G+F+ A  + +
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509

Query: 416 LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQA 475
           L   +G   ++  +NA++ G C+ G + EA   +       L  DK TY+ +I  + KQ 
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569

Query: 476 DIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYT 535
           D+  A+ +F  M K+  +P++ +YT+LI  FC +     +E  F+E      +P   TYT
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYT 629

Query: 536 SMICGYCRE--------------------------------------------------G 545
           ++I    +E                                                  G
Sbjct: 630 TLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHG 689

Query: 546 NLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRI 605
             ++  +FFHRM   G    + AY + +  LC    +  A    D M++KG  P  V+  
Sbjct: 690 QSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFA 749

Query: 606 TLAYEYCKI 614
            + + +C +
Sbjct: 750 AILHGFCVV 758



 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 207/450 (46%), Gaps = 29/450 (6%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +++++ +      A +++ +M  +G  P+  T  +++      G +D A  +  ++  RG
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V PD+A Y +++   CK G  L A    S MLDR  L D   +  +I  F   G    A 
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + F    + G+K ++++  +MI+G C+ G + +A   +  M  +   P+ +T++ +IDG 
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K+     A ++F + +     KPNV+TYT++ING+C       AE     M+ + L+PN
Sbjct: 566 VKQQDMATAIKIF-RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624

Query: 391 TNTYTTLIDGHCK-AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK--GRVQEAYK 447
             TYTTLI    K +   E+A     LM      PN  T+N ++ G  KK  G+V     
Sbjct: 625 VVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAE-- 682

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
              DG ++G  +       L SE             F +M   G      +Y + +   C
Sbjct: 683 --PDGSNHGQSS-------LFSE------------FFHRMKSDGWSDHAAAYNSALVCLC 721

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKF-FHRMSDHGCVPDS 566
               +  + MF ++ V+ GF P   ++ +++ G+C  GN        F  + + G +  +
Sbjct: 722 VHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKG-LEVA 780

Query: 567 IAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           + Y  ++     Q  + EA  +  +M+EK 
Sbjct: 781 VRYSQVLEQHLPQPVICEASTILHAMVEKA 810


>AT3G04760.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr3:1303884-1305692 REVERSE
           LENGTH=602
          Length = 602

 Score =  218 bits (554), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 225/450 (50%), Gaps = 4/450 (0%)

Query: 146 EVMQC--MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLF 203
           +V+ C  +++ F  +  + +AV  V E+  +   P+    N ++   C+M  +D A  + 
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVR-VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVL 181

Query: 204 EEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEK 263
           + M ++   PD+ +Y +M+ + C  G +  A K L+ +L         ++T++I     +
Sbjct: 182 DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLE 241

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
           G    AL+   +    GLKP++  + ++I G+CK G + +AFEM+  +  +G +P+V ++
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
             L+  L  +G  E+  +L  K+  SE   PNV+TY+ +I   CRD K+  A  LL  MK
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMF-SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
           E+GL P+  +Y  LI   C+ G  + A + +  M  +G  P+I  YN ++  LCK G+  
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
           +A ++       G   +  +YN + S      D  +AL +  +M  +GI PD  +Y ++I
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
           +  CRE  + E+     +     F P+  TY  ++ G+C+   +  AI     M  +GC 
Sbjct: 481 SCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
           P+   Y  LI G+       EA  L + ++
Sbjct: 541 PNETTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  209 bits (532), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 229/472 (48%), Gaps = 9/472 (1%)

Query: 226 CKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNL 285
           C+ GN +E+   L  M+ +G+  D    T +I  F       +A+R        G +P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 286 INFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK 345
             + ++I G CK   I  A  +L+ M  + + P+  T+  +I  LC +G  + A ++  +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAG 405
           L+ S+N +P V+TYT +I     +  ++ A  L+  M  +GL P+  TY T+I G CK G
Sbjct: 219 LL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 406 NFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYN 465
             +RAF+++  +  +G  P++ +YN ++  L  +G+ +E  K++   F    + + VTY+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 466 ILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRF 525
           ILI+  C+   I++A+ L   M + G+ PD +SY  LIA FCRE R+  +  F E  +  
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 526 GFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
           G +P    Y +++   C+ G    A++ F ++ + GC P+S +Y T+ S L        A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 586 RGLYDSMIEKGLIPCEVTRITLAYEYCK---IDDCCSAMVILDRLEKKLWIRTATTLVRK 642
             +   M+  G+ P E+T  ++    C+   +D+    +V +   E    + T   ++  
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517

Query: 643 LCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMT----ACYESNKYALVSDL 690
            C   ++  A      ++      N  T    +     A Y +    L +DL
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  144 bits (362), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 145/269 (53%), Gaps = 1/269 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++R+    G+ +E  +++ +M ++   PN  T ++++   C  G ++ A  L + M  +G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD+ SY  ++ A+C+ G +  A ++L  M+  G L D  ++  +++  C+ G A +AL
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F K  ++G  PN  ++ +M   L   G   +A  M+ EM+  G  P+  T+ ++I  L
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C++G  ++AF L + + RS    P+V+TY  ++ G+C+  ++  A  +L  M   G  PN
Sbjct: 484 CREGMVDEAFELLVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
             TYT LI+G   AG    A +L N + R
Sbjct: 543 ETTYTVLIEGIGFAGYRAEAMELANDLVR 571



 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 15/236 (6%)

Query: 128 YIVCATSLIGNGNLQKAHEVMQCM---------------VRSFAEIGRLKEAVEMVFEMH 172
           Y +  T+L  +G +++A  +++ M               + +F   GRL  A+E +  M 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 173 NQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVL 232
           + G +P+    N V+   C+ G  D A  +F ++   G  P+S+SY  M  A    G+ +
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 233 EADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMI 292
            A   +  M+  G   D  ++  +IS  C +G    A             P+++ +  ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 293 EGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVR 348
            G CK   I+ A  +LE MV  G +PN  T+T LI+G+   G+  +A  L   LVR
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571


>AT1G64580.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:23985078-23986649 REVERSE
           LENGTH=523
          Length = 523

 Score =  217 bits (553), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 217/443 (48%), Gaps = 3/443 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +  +A  +  EM     +P+      V+ +  +M   D   YL+ +M   G+  D  S+ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++  +C+   +  A   L  M+  GF     +   +++ FC+      A+         
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG-WTEK 338
           G  PN++ + ++I GLCK   +  A E+   M  +G + +  T+  LI GL   G WT+ 
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A RL   +V+ + + PNV+ +TA+I+ + ++  L  A  L   M  + ++PN  TY +LI
Sbjct: 239 A-RLLRDMVKRKID-PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
           +G C  G    A  + +LM  +G  P++ TYN ++ G CK  RV++  K+  +  + GL 
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            D  TYN LI  +C+   +  A  +F++M   G+ PDI +Y  L+   C   ++ ++ + 
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
            E+  +        TY  +I G CR   L  A   F  ++  G  PD+IAY T+ISGLC+
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476

Query: 579 QSKLDEARGLYDSMIEKGLIPCE 601
           +    EA  L   M E G +P E
Sbjct: 477 KGLQREADKLCRRMKEDGFMPSE 499



 Score =  202 bits (513), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 170 EMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMG 229
           +M   G  P+  TL  ++   C+      A  L + M   G  P+   Y  ++   CK  
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198

Query: 230 NVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFT 289
           ++  A +    M  +G   D  ++  +IS     G  T A R         + PN+I FT
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258

Query: 290 SMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
           ++I+   K G++ +A  + +EM+ +   PNV+T+ +LI+G C  G    A  +F  L+ S
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF-DLMVS 317

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
           +   P+V+TY  +I G+C+  ++     L   M  QGL+ +  TY TLI G+C+AG    
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377

Query: 410 AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILIS 469
           A  + N M   G SP+I TYN ++D LC  G++++A  M++D   + ++ D +TYNI+I 
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437

Query: 470 EHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
             C+   +K+A  LF  + + G++PD  +Y T+I+  CR+    E++         GF+P
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497

Query: 530 TKRTY 534
           ++R Y
Sbjct: 498 SERIY 502



 Score =  180 bits (457), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 190/417 (45%), Gaps = 1/417 (0%)

Query: 197 DYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLI 256
           D A  LF EM      P    +  ++    KM            M + G   D  SFT++
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 257 ISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW 316
           I  FC     + AL    K   +G +P+++   S++ G C+    ++A  +++ M   G+
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 317 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAE 376
            PNV  +  +I+GLCK      A  +F   +  +  + + +TY  +I+G     +   A 
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFY-CMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 377 MLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGL 436
            LL  M ++ + PN   +T LID   K GN   A +L   M R    PN+ TYN++++G 
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299

Query: 437 CKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI 496
           C  G + +A  M       G   D VTYN LI+  CK   ++  + LF +M   G+  D 
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359

Query: 497 HSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR 556
            +Y TLI  +C+  +++ ++  F   V  G  P   TY  ++   C  G +  A+     
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419

Query: 557 MSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
           +       D I Y  +I GLC+  KL EA  L+ S+  KG+ P  +  IT+    C+
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476



 Score =  163 bits (412), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 183/384 (47%), Gaps = 4/384 (1%)

Query: 303 QAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM 362
            AF +  EM+     P++   T ++  + K    +    L+ K+  +     ++ ++T +
Sbjct: 62  DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHDLYSFTIL 120

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGF 422
           I+ +CR  +L+ A  LLG+M + G  P+  T  +L++G C+   F+ A  L++ M   GF
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 423 SPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALA 482
            PN+  YN +++GLCK   +  A ++       G+ AD VTYN LIS          A  
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240

Query: 483 LFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYC 542
           L   M K  I P++  +T LI  F +E  + E+   ++E +R   +P   TY S+I G+C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300

Query: 543 REGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEV 602
             G L  A   F  M   GC PD + Y TLI+G CK  ++++   L+  M  +GL+    
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360

Query: 603 TRITLAYEYCKIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKL 659
           T  TL + YC+      A  + +R+        I T   L+  LC+  K+  A +    L
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420

Query: 660 LDMDFHVNRVTLAAFMTACYESNK 683
              +  V+ +T    +     ++K
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDK 444



 Score =  142 bits (359), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 156/356 (43%), Gaps = 36/356 (10%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F +  R +EAV +V  M   G VPN    N V+   C+   ++ A  +F  M  +G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +  D+ +Y  ++      G   +A + L  M+ R    +   FT +I  F ++G    A 
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             + +     + PN+  + S+I G C  G +  A  M + MV +G  P+V T+  LI G 
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK    E   +LF ++   +    +  TY  +I+GYC+  KLN A+ +  RM + G+ P+
Sbjct: 335 CKSKRVEDGMKLFCEMT-YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393

Query: 391 TNTYTTLIDGHCKAGNFERAFD-----------------------------------LMN 415
             TY  L+D  C  G  E+A                                     L  
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453

Query: 416 LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEH 471
            ++R+G  P+   Y  ++ GLC+KG  +EA K+ +    +G    +  Y+  + +H
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509



 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 118/282 (41%), Gaps = 40/282 (14%)

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
           F+ AF L   M +    P+I  +  ++  + K  +      +     + G+  D  ++ I
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           LI   C+ + +  ALAL  KM K G +P I +  +L+  FC+  R  E+    +    FG
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL---------- 576
           F+P    Y ++I G C+  +L  A++ F+ M   G   D++ Y TLISGL          
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 577 -------------------------CKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEY 611
                                     K+  L EAR LY  MI + ++P   T  +L   +
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299

Query: 612 CKIDDCCS-AMVILDRLEKKLW---IRTATTLVRKLCSERKV 649
           C I  C   A  + D +  K     + T  TL+   C  ++V
Sbjct: 300 C-IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340


>AT2G15630.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:6814521-6816404 FORWARD
           LENGTH=627
          Length = 627

 Score =  216 bits (550), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 208/410 (50%), Gaps = 4/410 (0%)

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS 277
           + ++V   C++  V EA +   +M ++GF     +   I++          A  ++    
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217

Query: 278 DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTE 337
            M +K N+  F  MI  LCK G +K+A   L  M   G KP + T+  L+ G   +G  E
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
            A RL +  ++S+  +P++ TY  +++  C +    RA  +L  MKE GL+P++ +Y  L
Sbjct: 278 GA-RLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNIL 333

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           I G    G+ E AF   + M ++G  P   TYN ++ GL  + +++ A  ++++    G+
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
             D VTYNILI+ +C+  D K+A AL  +M   GIQP   +YT+LI V CR+ +  E++ 
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
            FE+ V  G  P      +++ G+C  GN+  A      M      PD + Y  L+ GLC
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513

Query: 578 KQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
            + K +EAR L   M  +G+ P  ++  TL   Y K  D   A ++ D +
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563



 Score =  196 bits (498), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 222/457 (48%), Gaps = 4/457 (0%)

Query: 143 KAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYL 202
           K+  +   +VR   ++  + EA+E  + M  +G  P T+T N ++ +   +  ++ A   
Sbjct: 153 KSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVF 212

Query: 203 FEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCE 262
           + +M    +  +  ++ +M+   CK G + +A  +L +M   G      ++  ++  F  
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272

Query: 263 KGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYT 322
           +G    A     +    G +P++  +  ++  +C  G   +A E+L EM   G  P+  +
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVS 329

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
           +  LI G    G  E AF    ++V+ +   P   TY  +I+G   ++K+  AE+L+  +
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVK-QGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           +E+G++ ++ TY  LI+G+C+ G+ ++AF L + M  +G  P   TY +++  LC+K + 
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           +EA ++ +     G++ D V  N L+  HC   ++ +A +L  +M    I PD  +Y  L
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGC 562
           +   C E +  E+     E  R G  P   +Y ++I GY ++G+   A      M   G 
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            P  + Y  L+ GL K  + + A  L   M  +G++P
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605



 Score =  195 bits (495), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 209/432 (48%), Gaps = 7/432 (1%)

Query: 155 FAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
            + + R++ A     +M+   +  N  T N+++ + C+ G +  A+     M   G+ P 
Sbjct: 200 LSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPT 259

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH 274
             +Y  +V  +   G +  A   +S M  +GF  D  ++  I+S  C +G A+  LR   
Sbjct: 260 IVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR--- 316

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           +  ++GL P+ +++  +I G    G ++ AF   +EMV QG  P  YT+  LI GL  + 
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
             E A  + ++ +R +    + +TY  +INGYC+     +A  L   M   G+ P   TY
Sbjct: 377 KIEAA-EILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTY 435

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
           T+LI   C+      A +L   +  +G  P++   N ++DG C  G +  A+ +LK+   
Sbjct: 436 TSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM 495

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
             +  D VTYN L+   C +   ++A  L  +M + GI+PD  SY TLI+ + ++     
Sbjct: 496 MSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKH 555

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
           + M  +E +  GF PT  TY +++ G  +     +A +    M   G VP+  ++ ++I 
Sbjct: 556 AFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIE 615

Query: 575 GLCKQSKLDEAR 586
            +   S LD  +
Sbjct: 616 AM---SNLDAKK 624



 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 175/366 (47%), Gaps = 7/366 (1%)

Query: 286 INFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK 345
           I F  ++   C+   + +A E    M  +G+ P   T   ++  L +    E A+  +  
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAG 405
           + R E  K NV T+  MIN  C++ KL +A+  LG M+  G+ P   TY TL+ G    G
Sbjct: 216 MYRMEI-KSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274

Query: 406 NFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYN 465
             E A  +++ M  +GF P++ TYN I+  +C +GR  E  + +K+    GL  D V+YN
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKE---IGLVPDSVSYN 331

Query: 466 ILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRF 525
           ILI       D++ A A   +M K G+ P  ++Y TLI     E ++  +E+   E    
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391

Query: 526 GFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
           G +    TY  +I GYC+ G+   A      M   G  P    Y +LI  LC+++K  EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451

Query: 586 RGLYDSMIEKGLIPCEVTRITLAYEYCKI---DDCCSAMVILDRLEKKLWIRTATTLVRK 642
             L++ ++ KG+ P  V   TL   +C I   D   S +  +D +       T   L+R 
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511

Query: 643 LCSERK 648
           LC E K
Sbjct: 512 LCGEGK 517



 Score =  122 bits (306), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 135/297 (45%), Gaps = 6/297 (2%)

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
           MKE+G  P T T   ++    +    E A+     M R     N+ T+N +++ LCK+G+
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240

Query: 442 VQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTT 501
           +++A   L      G++   VTYN L+     +  I+ A  + S+M   G QPD+ +Y  
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300

Query: 502 LIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
           +++  C E R SE      E    G +P   +Y  +I G    G+L MA  +   M   G
Sbjct: 301 ILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357

Query: 562 CVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAM 621
            VP    Y TLI GL  ++K++ A  L   + EKG++   VT   L   YC+  D   A 
Sbjct: 358 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF 417

Query: 622 VILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
            + D +     +    T T+L+  LC + K   A   F K++      + V +   M
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLM 474



 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 47/227 (20%)

Query: 115 AIGYSRFRHFMRLYIVCATS-----------LIGNGNLQKAHEVMQCMVRSFAEIGRLKE 163
            I  ++F +   +Y++C  +           ++G G ++    +M  ++     IG +  
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG-MKPDLVMMNTLMDGHCAIGNMDR 485

Query: 164 AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
           A  ++ EM    + P+  T N +M+  C  G  + A+ L  EM  RG+ PD  SY  ++ 
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP 283
            Y K G+   A           F+V +   +L                        G  P
Sbjct: 546 GYSKKGDTKHA-----------FMVRDEMLSL------------------------GFNP 570

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
            L+ + ++++GL K    + A E+L EM  +G  PN  +  ++I+ +
Sbjct: 571 TLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617


>AT1G09820.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr1:3190594-3192414 REVERSE
           LENGTH=606
          Length = 606

 Score =  214 bits (544), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 218/406 (53%), Gaps = 23/406 (5%)

Query: 165 VEMVF-EMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
           VE V+ EM  + + PN  T N+V+   C+ G ++ A+ + E+M   G  P+  SY  ++ 
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266

Query: 224 AYCKMGN---VLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
            YCK+G    + +AD  L  M++     +  +F ++I  F +      +++ F +  D  
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF 340
           +KPN+I++ S+I GLC  G I +A  M ++MV  G +PN+ T+ ALI+G CK    ++A 
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386

Query: 341 RLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDG 400
            +F   V+ +   P    Y  +I+ YC+  K++    L   M+ +G++P+  TY  LI G
Sbjct: 387 DMFGS-VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445

Query: 401 HCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEAD 460
            C+ GN E A  L + ++ +G  P++ T++ +++G C+KG  ++A  +LK+    GL+  
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504

Query: 461 KVTYNILISEHCKQADIKQALALFSKMAKS-GIQPDIHSYTTLIAVFCREKRMSESEMFF 519
            +TYNI++  +CK+ ++K A  + ++M K   ++ ++ SY  L+  + ++ ++ ++ M  
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
            E +  G +P + TY                +K    M D G VPD
Sbjct: 565 NEMLEKGLVPNRITYE--------------IVK--EEMVDQGFVPD 594



 Score =  201 bits (512), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 207/405 (51%), Gaps = 6/405 (1%)

Query: 203 FEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCE 262
           F+     G    + S + +++A  K     + +     M+ R    +  +F ++I+  C+
Sbjct: 176 FKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCK 235

Query: 263 KGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCK---RGSIKQAFEMLEEMVCQGWKPN 319
            G   +A          G  PN++++ ++I+G CK    G + +A  +L+EMV     PN
Sbjct: 236 TGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPN 295

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
           + T   LIDG  K      + ++F +++  ++ KPNV++Y ++ING C   K++ A  + 
Sbjct: 296 LTTFNILIDGFWKDDNLPGSMKVFKEML-DQDVKPNVISYNSLINGLCNGGKISEAISMR 354

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
            +M   G+ PN  TY  LI+G CK    + A D+   +  +G  P    YN ++D  CK 
Sbjct: 355 DKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL 414

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
           G++ + + + ++    G+  D  TYN LI+  C+  +I+ A  LF ++   G+ PD+ ++
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTF 473

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
             L+  +CR+    ++ M  +E  + G  P   TY  ++ GYC+EGNL  A     +M  
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533

Query: 560 HGCVPDSIA-YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
              +  ++A Y  L+ G  ++ KL++A  L + M+EKGL+P  +T
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578



 Score =  196 bits (498), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 212/429 (49%), Gaps = 22/429 (5%)

Query: 249 DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           +N+ F L    F   G+      Y +K S +  KP +I        L K         + 
Sbjct: 165 NNSRFELGFEAFKRSGY------YGYKLSALSCKPLMI-------ALLKENRSADVEYVY 211

Query: 309 EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR 368
           +EM+ +  +PNV+T   +I+ LCK G   KA R  ++ ++     PNV++Y  +I+GYC+
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKA-RDVMEDMKVYGCSPNVVSYNTLIDGYCK 270

Query: 369 ---DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPN 425
              + K+ +A+ +L  M E  + PN  T+  LIDG  K  N   +  +   M  +   PN
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330

Query: 426 ICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFS 485
           + +YN++++GLC  G++ EA  M       G++ + +TYN LI+  CK   +K+AL +F 
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390

Query: 486 KMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREG 545
            +   G  P    Y  LI  +C+  ++ +     EE  R G +P   TY  +I G CR G
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450

Query: 546 NLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRI 605
           N+  A K F +++  G +PD + +  L+ G C++ +  +A  L   M + GL P  +T  
Sbjct: 451 NIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509

Query: 606 TLAYEYCKIDDCCSAMVILDRLEKKLWIR----TATTLVRKLCSERKVGMAALFFHKLLD 661
            +   YCK  +  +A  +  ++EK+  +R    +   L++    + K+  A +  +++L+
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569

Query: 662 MDFHVNRVT 670
                NR+T
Sbjct: 570 KGLVPNRIT 578



 Score =  159 bits (402), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 176/365 (48%), Gaps = 21/365 (5%)

Query: 130 VCATSLIGNGNLQKAHEVMQCM--------VRSFAEI----------GRLKEAVEMVFEM 171
           V   +L   G + KA +VM+ M        V S+  +          G++ +A  ++ EM
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287

Query: 172 HNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNV 231
               + PN  T N+++    +   +  +  +F+EM  + V P+  SY  ++   C  G +
Sbjct: 288 VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKI 347

Query: 232 LEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSM 291
            EA      M+  G   +  ++  +I+ FC+      AL  F      G  P    +  +
Sbjct: 348 SEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407

Query: 292 IEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSEN 351
           I+  CK G I   F + EEM  +G  P+V T+  LI GLC+ G  E A +LF +L  +  
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL--TSK 465

Query: 352 NKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAF 411
             P+++T+  ++ GYCR  +  +A MLL  M + GL P   TY  ++ G+CK GN + A 
Sbjct: 466 GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525

Query: 412 DLMNLMSRE-GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISE 470
           ++   M +E     N+ +YN ++ G  +KG++++A  +L +    GL  +++TY I+  E
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEE 585

Query: 471 HCKQA 475
              Q 
Sbjct: 586 MVDQG 590



 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 56/230 (24%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
             ++  F +   LKEA++M   +  QG VP T+  N+++   C++G +D    L EEM  
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G+ PD  +Y  ++   C+ GN+  A K    +  +G L D  +F +++  +C KG + +
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRK 488

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAF----------------------- 305
           A     + S MGLKP  + +  +++G CK G++K A                        
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548

Query: 306 -----------------EMLE---------------EMVCQGWKPNVYTH 323
                            EMLE               EMV QG+ P++  H
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGH 598



 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 15/258 (5%)

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISE-----HCKQADIKQALALFS 485
           + +DG  + G   + + +    FH     D V  N +I++     +   +  +     F 
Sbjct: 122 SFLDGFVRNGSDHQVHSI----FHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFK 177

Query: 486 KMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREG 545
           +    G +    S   L+    +E R ++ E  ++E +R    P   T+  +I   C+ G
Sbjct: 178 RSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTG 237

Query: 546 NLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK---QSKLDEARGLYDSMIEKGLIPCEV 602
            +  A      M  +GC P+ ++Y TLI G CK     K+ +A  +   M+E  + P   
Sbjct: 238 KMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLT 297

Query: 603 TRITLAYEYCKIDDCCSAMVILDRL---EKKLWIRTATTLVRKLCSERKVGMAALFFHKL 659
           T   L   + K D+   +M +   +   + K  + +  +L+  LC+  K+  A     K+
Sbjct: 298 TFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKM 357

Query: 660 LDMDFHVNRVTLAAFMTA 677
           +      N +T  A +  
Sbjct: 358 VSAGVQPNLITYNALING 375


>AT2G17140.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:7462820-7465740 FORWARD
           LENGTH=874
          Length = 874

 Score =  213 bits (541), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 230/518 (44%), Gaps = 63/518 (12%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           G+ P T T NL+++  C+   VD A+ LF+EM  +G  P+  ++ ++V  YCK G   + 
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
            + L+ M   G L +   +  I+S FC +G    + +   K  + GL P+++ F S I  
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261

Query: 295 LCKRGSIKQAFEMLEEMVCQGW----KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 350
           LCK G +  A  +  +M    +    +PN  T+  ++ G CK G  E A  LF + +R  
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF-ESIREN 320

Query: 351 NNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA 410
           ++  ++ +Y   + G  R  K   AE +L +M ++G+ P+  +Y  L+DG CK G    A
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380

Query: 411 FDLMNLMSREGFSPNICTYNAIVDGLC--------------------------------- 437
             ++ LM R G  P+  TY  ++ G C                                 
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440

Query: 438 --KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ-- 493
             K GR+ EA ++L+     G   D VT NI++   C   ++ +A+ +   M   G    
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500

Query: 494 ---------------------PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
                                PD+ +Y+TL+   C+  R +E++  F E +     P   
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV 560

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
            Y   I  +C++G ++ A +    M   GC      Y +LI GL  ++++ E  GL D M
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620

Query: 593 IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
            EKG+ P   T  T     C+ +    A  +LD + +K
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658



 Score =  186 bits (471), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 245/557 (43%), Gaps = 36/557 (6%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           +   +V SF   GR  ++ +MV +M  +G+VP+  T N  +   C+ G V  A  +F +M
Sbjct: 219 IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278

Query: 207 SARGV----HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCE 262
                     P+S +Y +M+  +CK+G + +A      + +   L    S+ + +     
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338

Query: 263 KGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYT 322
            G    A     + +D G+ P++ ++  +++GLCK G +  A  ++  M   G  P+  T
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
           +  L+ G C  G  + A  L  +++R+ N  PN  T   +++   +  +++ AE LL +M
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRN-NCLPNAYTCNILLHSLWKMGRISEAEELLRKM 457

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS------------------- 423
            E+G   +T T   ++DG C +G  ++A +++  M   G +                   
Sbjct: 458 NEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIE 517

Query: 424 ----PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
               P++ TY+ +++GLCK GR  EA  +  +     L+ D V YNI I   CKQ  I  
Sbjct: 518 NNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577

Query: 480 ALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMIC 539
           A  +   M K G    + +Y +LI     + ++ E     +E    G  P   TY + I 
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ 637

Query: 540 GYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI-----E 594
             C    +  A      M      P+  ++  LI   CK    D A+ ++++ +     +
Sbjct: 638 YLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQK 697

Query: 595 KGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAAL 654
           +GL       +  A +  K  +   A  +LDR   +L       LV  LC + ++ +A+ 
Sbjct: 698 EGLYSLMFNELLAAGQLLKATELLEA--VLDR-GFELGTFLYKDLVESLCKKDELEVASG 754

Query: 655 FFHKLLDMDFHVNRVTL 671
             HK++D  +  +   L
Sbjct: 755 ILHKMIDRGYGFDPAAL 771



 Score =  164 bits (414), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 223/481 (46%), Gaps = 35/481 (7%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
           +LQ  +  +Q +VR     G+  EA  ++ +M ++G+ P+  + N++M   C++G++  A
Sbjct: 325 SLQSYNIWLQGLVRH----GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
           + +   M   GV PD+ +Y  ++  YC +G V  A   L  M+    L +  +  +++  
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK-- 317
             + G  + A     K ++ G   + +    +++GLC  G + +A E+++ M   G    
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500

Query: 318 ---------------------PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNV 356
                                P++ T++ L++GLCK G   +A  LF +++  E  +P+ 
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM-GEKLQPDS 559

Query: 357 LTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNL 416
           + Y   I+ +C+  K++ A  +L  M+++G   +  TY +LI G            LM+ 
Sbjct: 560 VAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDE 619

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           M  +G SPNICTYN  +  LC+  +V++A  +L +     +  +  ++  LI   CK  D
Sbjct: 620 MKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPD 679

Query: 477 IKQALALF-SKMAKSGIQPDIHS--YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
              A  +F + ++  G +  ++S  +  L+A      ++ ++    E  +  GF      
Sbjct: 680 FDMAQEVFETAVSICGQKEGLYSLMFNELLAA----GQLLKATELLEAVLDRGFELGTFL 735

Query: 534 YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
           Y  ++   C++  L +A    H+M D G   D  A   +I GL K     EA    D M+
Sbjct: 736 YKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795

Query: 594 E 594
           E
Sbjct: 796 E 796



 Score =  152 bits (384), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 190/413 (46%), Gaps = 14/413 (3%)

Query: 251 ASFTLIISEFCEKGFATRALRYFH----KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
           +S   ++S F +     +A   F     +F +   KP++  +  ++E   K   ++    
Sbjct: 76  SSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPEN--KPSVYLYNLLLESCIKERRVEFVSW 133

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           + ++MV  G  P  YT   LI  LC     + A  LF ++   +  KPN  T+  ++ GY
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE-KGCKPNEFTFGILVRGY 192

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
           C+    ++   LL  M+  G++PN   Y T++   C+ G  + +  ++  M  EG  P+I
Sbjct: 193 CKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDI 252

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKD---GFHNGL-EADKVTYNILISEHCKQADIKQALA 482
            T+N+ +  LCK+G+V +A ++  D     + GL   + +TYN+++   CK   ++ A  
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312

Query: 483 LFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYC 542
           LF  + ++     + SY   +    R  +  E+E   ++    G  P+  +Y  ++ G C
Sbjct: 313 LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372

Query: 543 REGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEV 602
           + G L+ A      M  +G  PD++ YG L+ G C   K+D A+ L   M+    +P   
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432

Query: 603 TRITLAYEYCKIDDCCSAMVILDRLEKK---LWIRTATTLVRKLCSERKVGMA 652
           T   L +   K+     A  +L ++ +K   L   T   +V  LC   ++  A
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485



 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 170/386 (44%), Gaps = 12/386 (3%)

Query: 286 INFTSMIEGLCKRGSIKQAFEMLEEMVCQG--WKPNVYTHTALIDGLCKKGWTEKAFRLF 343
           ++ T  I  +  R  + +  + L  ++      K  + +  +++    K    +KAF  F
Sbjct: 39  LDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQF 98

Query: 344 LKLVRSE--NNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGH 401
            +LVRS    NKP+V  Y  ++    ++ ++     L   M   G+ P T T+  LI   
Sbjct: 99  -QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRAL 157

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
           C +   + A +L + M  +G  PN  T+  +V G CK G   +  ++L      G+  +K
Sbjct: 158 CDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNK 217

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
           V YN ++S  C++     +  +  KM + G+ PDI ++ + I+  C+E ++ ++   F +
Sbjct: 218 VIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSD 277

Query: 522 AVRFGFI----PTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
                ++    P   TY  M+ G+C+ G L  A   F  + ++  +    +Y   + GL 
Sbjct: 278 MELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLV 337

Query: 578 KQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTAT 637
           +  K  EA  +   M +KG+ P   +   L    CK+     A  I+  +++      A 
Sbjct: 338 RHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAV 397

Query: 638 T---LVRKLCSERKVGMAALFFHKLL 660
           T   L+   CS  KV  A     +++
Sbjct: 398 TYGCLLHGYCSVGKVDAAKSLLQEMM 423



 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 145/319 (45%), Gaps = 5/319 (1%)

Query: 130 VCATSLIGNGNLQKAHEVMQCM-VRSFAEIGRLKEA-VEMVFE-MHNQGMVPNTQTLNLV 186
           +    L G+G L KA E+++ M V   A +G L  + + +V + +     +P+  T + +
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530

Query: 187 MKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGF 246
           +   C+ G    A+ LF EM    + PDS +Y + +  +CK G +  A + L  M  +G 
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
                ++  +I     K           +  + G+ PN+  + + I+ LC+   ++ A  
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           +L+EM+ +   PNV++   LI+  CK    + A  +F   V     K  +  Y+ M N  
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNEL 708

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
               +L +A  LL  + ++G    T  Y  L++  CK    E A  +++ M   G+  + 
Sbjct: 709 LAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDP 768

Query: 427 CTYNAIVDGLCKKGRVQEA 445
                ++DGL K G  +EA
Sbjct: 769 AALMPVIDGLGKMGNKKEA 787


>AT1G31840.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:11424006-11426528 FORWARD
           LENGTH=811
          Length = 811

 Score =  213 bits (541), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 234/483 (48%), Gaps = 7/483 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F + G +  A ++   M  +G+ P+    + ++    + G++     LF +   +G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V  D   +   +  Y K G++  A      ML +G   +  ++T++I   C+ G    A 
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             + +    G++P+++ ++S+I+G CK G+++  F + E+M+  G+ P+V  +  L+DGL
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K+G    A R  +K++  ++ + NV+ + ++I+G+CR ++ + A  +   M   G+ P+
Sbjct: 472 SKQGLMLHAMRFSVKML-GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530

Query: 391 TNTYTTLI------DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQE 444
             T+TT++      D  CK         L +LM R   S +I   N ++  L K  R+++
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 590

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
           A K   +     +E D VTYN +I  +C    + +A  +F  +  +   P+  + T LI 
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 650

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
           V C+   M  +   F      G  P   TY  ++  + +  ++  + K F  M + G  P
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVIL 624
             ++Y  +I GLCK+ ++DEA  ++   I+  L+P  V    L   YCK+     A ++ 
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 770

Query: 625 DRL 627
           + +
Sbjct: 771 EHM 773



 Score =  210 bits (534), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 237/495 (47%), Gaps = 10/495 (2%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           G  PN  T   ++   C+ G +D A  LF+ M  RG+ PD  +Y  ++  Y K G +   
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
            K  S  L +G  +D   F+  I  + + G    A   + +    G+ PN++ +T +I+G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
           LC+ G I +AF M  +++ +G +P++ T+++LIDG CK G     F L+  +++     P
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM-GYPP 459

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           +V+ Y  +++G  +   +  A     +M  Q +  N   + +LIDG C+   F+ A  + 
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519

Query: 415 NLMSREGFSPNICTYNAIV------DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILI 468
            LM   G  P++ T+  ++      D  CK  +     ++      N + AD    N++I
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 579

Query: 469 SEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFI 528
               K   I+ A   F+ + +  ++PDI +Y T+I  +C  +R+ E+E  FE      F 
Sbjct: 580 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 639

Query: 529 PTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGL 588
           P   T T +I   C+  ++  AI+ F  M++ G  P+++ YG L+    K   ++ +  L
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699

Query: 589 YDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDR-LEKKLW--IRTATTLVRKLCS 645
           ++ M EKG+ P  V+   +    CK      A  I  + ++ KL   +     L+R  C 
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759

Query: 646 ERKVGMAALFFHKLL 660
             ++  AAL +  +L
Sbjct: 760 VGRLVEAALLYEHML 774



 Score =  173 bits (439), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 155/603 (25%), Positives = 263/603 (43%), Gaps = 60/603 (9%)

Query: 108 ALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMV----RSFAEIGRLKE 163
           AL +F WA    +   F  +    A  LI NG    A +V   M+    + F  +G +++
Sbjct: 86  ALKYFRWAEISGKDPSFYTI----AHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRD 141

Query: 164 AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVH-PDSASYRVMV 222
                          +      +M+  C  G+VD A  +F   +  GV  P  + YR++ 
Sbjct: 142 RSL------------DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLN 189

Query: 223 VAYCKMGNVLEADKW---------LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYF 273
                    L AD +          S +   GF++D        + FC KG  T+AL + 
Sbjct: 190 SLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLD--------ALFC-KGEVTKALDFH 240

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
               + G +  +++   +++GL     I+ A  +L  ++  G  PNV T   LI+G CK+
Sbjct: 241 RLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
           G  ++AF LF K++     +P+++ Y+ +I+GY +   L     L  +   +G+  +   
Sbjct: 300 GEMDRAFDLF-KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVV 358

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           +++ ID + K+G+   A  +   M  +G SPN+ TY  ++ GLC+ GR+ EA+ M     
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
             G+E   VTY+ LI   CK  +++   AL+  M K G  PD+  Y  L+    ++  M 
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478

Query: 514 ESEMF----FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
            +  F      +++R   +     + S+I G+CR      A+K F  M  +G  PD   +
Sbjct: 479 HAMRFSVKMLGQSIRLNVV----VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534

Query: 570 GTLI------SGLCKQSKLDEARGLYDSM----IEKGLIPCEVTRITLAYEYCKIDDCCS 619
            T++         CK  K      L+D M    I   +  C V  I L ++  +I+D   
Sbjct: 535 TTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV-IHLLFKCHRIEDASK 593

Query: 620 AMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACY 679
               L   + +  I T  T++   CS R++  A   F  L    F  N VTL   +    
Sbjct: 594 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 653

Query: 680 ESN 682
           ++N
Sbjct: 654 KNN 656



 Score =  171 bits (434), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 191/427 (44%), Gaps = 7/427 (1%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V    +  + + G L  A  +   M  QG+ PN  T  +++K  C+ G +  A  ++ ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
             RG+ P   +Y  ++  +CK GN+         M+  G+  D   + +++    ++G  
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             A+R+  K     ++ N++ F S+I+G C+     +A ++   M   G KP+V T T +
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537

Query: 327 I------DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG 380
           +      D  CK        +LF  L++      ++     +I+   +  ++  A     
Sbjct: 538 MRVSIMEDAFCKHMKPTIGLQLF-DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 596

Query: 381 RMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
            + E  + P+  TY T+I G+C     + A  +  L+    F PN  T   ++  LCK  
Sbjct: 597 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 656

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
            +  A +M       G + + VTY  L+    K  DI+ +  LF +M + GI P I SY+
Sbjct: 657 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
            +I   C+  R+ E+   F +A+    +P    Y  +I GYC+ G L  A   +  M  +
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776

Query: 561 GCVPDSI 567
           G  PD +
Sbjct: 777 GVKPDDL 783


>AT1G64100.2 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr1:23791585-23795563 FORWARD LENGTH=806
          Length = 806

 Score =  212 bits (540), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 241/514 (46%), Gaps = 51/514 (9%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIAC----------------EMG 194
           +++ F +  +L  ++    ++   G  P+  T N ++   C                E G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT 254
            ++ A  LF++M   G+ P   ++  ++   C  G VLEA   ++ M+ +G  +D  ++ 
Sbjct: 207 FLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265

Query: 255 LIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ 314
            I++  C+ G    AL    K  +  +KP+++ ++++I+ LCK G    A  +  EM+ +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325

Query: 315 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR 374
           G  PNV+T+  +IDG C  G    A RL   ++  E N P+VLT+ A+I+   ++ KL  
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN-PDVLTFNALISASVKEGKLFE 384

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA---FDLM----------------- 414
           AE L   M  + + P+T TY ++I G CK   F+ A   FDLM                 
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444

Query: 415 -----------NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
                        +SR G   N  TYN ++ G C+   +  A  + ++   +G+  D +T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
            NIL+   C+   +++AL LF  +  S I  D  +Y  +I   C+  ++ E+   F    
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 524 RFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
             G  P  +TY  MI G+C +  ++ A   FH+M D+G  PD+  Y TLI G  K  ++D
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 584 EARGLYDSMIEKGLIPCEVTRITLAYE-YCKIDD 616
           ++  L   M   G      T I +A E  C++ D
Sbjct: 625 KSIELISEMRSNGFSGDAFT-IKMAEEIICRVSD 657



 Score =  201 bits (510), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/567 (23%), Positives = 251/567 (44%), Gaps = 56/567 (9%)

Query: 155 FAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
           F  + R   A+ +  +M  + +  N  + N+++K  C+   + ++   F +++  G  PD
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPD 175

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNA---------------SFTLIISE 259
             ++  ++   C    + EA      M++ GFL   A               +F  +I+ 
Sbjct: 176 VVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLING 235

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
            C +G    A    +K    GL  +++ + +++ G+CK G  K A  +L +M     KP+
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
           V  ++A+ID LCK G    A  LF +++  +   PNV TY  MI+G+C   + + A+ LL
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
             M E+ + P+  T+  LI    K G    A  L + M      P+  TYN+++ G CK 
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
            R  +A  M    F      D VT+N +I  +C+   + + + L  ++++ G+  +  +Y
Sbjct: 415 NRFDDAKHM----FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
            TLI  FC    ++ ++  F+E +  G  P   T   ++ G+C    L  A++ F  +  
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530

Query: 560 HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCS 619
                D++AY  +I G+CK SK+DEA  L+ S+   G+ P                    
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD------------------- 571

Query: 620 AMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACY 679
                        ++T   ++   C +  +  A + FHK+ D     +  T    +  C 
Sbjct: 572 -------------VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618

Query: 680 ESNK----YALVSDLSARIYKDNRLTV 702
           ++ +      L+S++ +  +  +  T+
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTI 645



 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 5/362 (1%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           +   ++    + G   +A  +  EM  +G+ PN  T N ++   C  G    AQ L  +M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
             R ++PD  ++  ++ A  K G + EA+K    ML R    D  ++  +I  FC+    
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             A   F    D+   P+++ F ++I+  C+   + +  ++L E+  +G   N  T+  L
Sbjct: 418 DDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           I G C+      A  LF +++ S    P+ +T   ++ G+C ++KL  A  L   ++   
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           +  +T  Y  +I G CK    + A+DL   +   G  P++ TYN ++ G C K  + +A 
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
            +      NG E D  TYN LI    K  +I +++ L S+M  +G   D  +      + 
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEII 652

Query: 507 CR 508
           CR
Sbjct: 653 CR 654


>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
           chr4:15403020-15406358 FORWARD LENGTH=1112
          Length = 1112

 Score =  211 bits (537), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 159/594 (26%), Positives = 264/594 (44%), Gaps = 77/594 (12%)

Query: 173 NQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVL 232
           N  +V  T+T N +++     G ++   Y+F+ M  R +  D+ +Y  +  +    G + 
Sbjct: 111 NLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLK 170

Query: 233 EADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMI 292
           +A   L  M + GF+++  S+  +I    +  F T A+  + +    G +P+L  ++S++
Sbjct: 171 QAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM 230

Query: 293 EGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN 352
            GL KR  I     +L+EM   G KPNVYT T  I  L + G   +A+ + LK +  E  
Sbjct: 231 VGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI-LKRMDDEGC 289

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMK----------------------------- 383
            P+V+TYT +I+  C   KL+ A+ +  +MK                             
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349

Query: 384 ------EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
                 + G +P+  T+T L+D  CKAGNF  AFD +++M  +G  PN+ TYN ++ GL 
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409

Query: 438 KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIH 497
           +  R+ +A ++  +    G++    TY + I  + K  D   AL  F KM   GI P+I 
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469

Query: 498 SYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
           +    +    +  R  E++  F      G +P   TY  M+  Y + G +  AIK    M
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529

Query: 558 SDHGCVPDSI-----------------------------------AYGTLISGLCKQSKL 582
            ++GC PD I                                    Y TL++GL K  K+
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR---TATTL 639
            EA  L++ M++KG  P  +T  TL    CK D+   A+ +L ++     +    T  T+
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649

Query: 640 VRKLCSERKVGMAALFFH---KLLDMDFHVNRVTLAAFMTACYESNKYALVSDL 690
           +  L    +V  A  FFH   KL+  DF      L   + A    + Y ++++ 
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703



 Score =  200 bits (509), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 223/470 (47%), Gaps = 1/470 (0%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           EA+E+   M  +G  P+ QT + +M    +   +D    L +EM   G+ P+  ++ + +
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265

Query: 223 VAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK 282
               + G + EA + L  M D G   D  ++T++I   C       A   F K      K
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P+ + + ++++       +    +   EM   G  P+V T T L+D LCK G   +AF  
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
            L ++R +   PN+ TY  +I G  R  +L+ A  L G M+  G+ P   TY   ID + 
Sbjct: 386 -LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           K+G+   A +    M  +G +PNI   NA +  L K GR +EA ++       GL  D V
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           TYN+++  + K  +I +A+ L S+M ++G +PD+    +LI    +  R+ E+   F   
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
                 PT  TY +++ G  + G +  AI+ F  M   GC P++I + TL   LCK  ++
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW 632
             A  +   M++ G +P   T  T+ +   K      AM    +++K ++
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY 674



 Score =  179 bits (453), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 138/561 (24%), Positives = 229/561 (40%), Gaps = 116/561 (20%)

Query: 151  MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
            M++ ++++G + EA++++ EM   G  P+   +N ++    +   VD A  +F  M    
Sbjct: 509  MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568

Query: 211  VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
            + P   +Y  ++    K G + EA +    M+ +G   +  +F  +    C+    T AL
Sbjct: 569  LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628

Query: 271  RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQA---FEMLEEMVCQGWKPNVYTHTALI 327
            +   K  DMG  P++  + ++I GL K G +K+A   F  ++++V     P+  T   L+
Sbjct: 629  KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLV----YPDFVTLCTLL 684

Query: 328  DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMI---------------------NGY 366
             G+ K    E A+++    + +  ++P  L +  +I                     NG 
Sbjct: 685  PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744

Query: 367  CRD-----------------------------------DKLNRAEMLLG----------- 380
            CRD                                    KL    +L+G           
Sbjct: 745  CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804

Query: 381  -----RMKEQGLIPNTNTYTTLID-----------------------------------G 400
                 ++K  G IP+  TY  L+D                                   G
Sbjct: 805  QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864

Query: 401  HCKAGNFERAFDL-MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
              KAGN + A DL  +LMS   FSP  CTY  ++DGL K GR+ EA ++ +     G   
Sbjct: 865  LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924

Query: 460  DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
            +   YNILI+   K  +   A ALF +M K G++PD+ +Y+ L+   C   R+ E   +F
Sbjct: 925  NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984

Query: 520  EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM-SDHGCVPDSIAYGTLISGLCK 578
            +E    G  P    Y  +I G  +   L  A+  F+ M +  G  PD   Y +LI  L  
Sbjct: 985  KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044

Query: 579  QSKLDEARGLYDSMIEKGLIP 599
               ++EA  +Y+ +   GL P
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEP 1065



 Score =  174 bits (441), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/522 (24%), Positives = 223/522 (42%), Gaps = 80/522 (15%)

Query: 154 SFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHP 213
           S A+ GR +EA ++ + + + G+VP++ T N++MK   ++G +D A  L  EM   G  P
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536

Query: 214 D-----------------------------------SASYRVMVVAYCKMGNVLEADKWL 238
           D                                     +Y  ++    K G + EA +  
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
             M+ +G   +  +F  +    C+    T AL+   K  DMG  P++  + ++I GL K 
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656

Query: 299 GSIKQA---FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPN 355
           G +K+A   F  ++++V     P+  T   L+ G+ K    E A+++    + +  ++P 
Sbjct: 657 GQVKEAMCFFHQMKKLV----YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPA 712

Query: 356 VLTYTAMI---------------------NGYCRD---------------DKLNRAEMLL 379
            L +  +I                     NG CRD               + ++ A  L 
Sbjct: 713 NLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLF 772

Query: 380 GRM-KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
            +  K+ G+ P   TY  LI G  +A   E A D+   +   G  P++ TYN ++D   K
Sbjct: 773 EKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGK 832

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK-MAKSGIQPDIH 497
            G++ E +++ K+   +  EA+ +T+NI+IS   K  ++  AL L+   M+     P   
Sbjct: 833 SGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTAC 892

Query: 498 SYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
           +Y  LI    +  R+ E++  FE  + +G  P    Y  +I G+ + G    A   F RM
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
              G  PD   Y  L+  LC   ++DE    +  + E GL P
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994



 Score =  173 bits (438), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 180/392 (45%), Gaps = 4/392 (1%)

Query: 184  NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAY-CKMGNVLEADKWLSVML 242
            +L+  I  E G +D A    E + A G+  D  S  V ++ Y CK  NV  A        
Sbjct: 718  DLIGSILAEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFT 776

Query: 243  -DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSI 301
             D G      ++ L+I    E      A   F +    G  P++  +  +++   K G I
Sbjct: 777  KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836

Query: 302  KQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTA 361
             + FE+ +EM     + N  TH  +I GL K G  + A  L+  L+   +  P   TY  
Sbjct: 837  DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896

Query: 362  MINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
            +I+G  +  +L  A+ L   M + G  PN   Y  LI+G  KAG  + A  L   M +EG
Sbjct: 897  LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956

Query: 422  FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQAL 481
              P++ TY+ +VD LC  GRV E     K+   +GL  D V YN++I+   K   +++AL
Sbjct: 957  VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016

Query: 482  ALFSKMAKS-GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
             LF++M  S GI PD+++Y +LI        + E+   + E  R G  P   T+ ++I G
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076

Query: 541  YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
            Y   G    A   +  M   G  P++  Y  L
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 135/319 (42%), Gaps = 8/319 (2%)

Query: 311 MVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDD 370
           M+ +  KP++ +   +  GL     T+ +F  F  +  + N      T   M+     D 
Sbjct: 73  MIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDG 132

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
           KL     +   M+++ +  +TNTY T+       G  ++A   +  M   GF  N  +YN
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192

Query: 431 AIVDGLCKKGRVQEAY----KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK 486
            ++  L K     EA     +M+ +GF   L+    TY+ L+    K+ DI   + L  +
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQ----TYSSLMVGLGKRRDIDSVMGLLKE 248

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           M   G++P+++++T  I V  R  +++E+    +     G  P   TYT +I   C    
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308

Query: 547 LTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRIT 606
           L  A + F +M      PD + Y TL+        LD  +  +  M + G +P  VT   
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368

Query: 607 LAYEYCKIDDCCSAMVILD 625
           L    CK  +   A   LD
Sbjct: 369 LVDALCKAGNFGEAFDTLD 387



 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 115/307 (37%), Gaps = 26/307 (8%)

Query: 409 RAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN-GLEADKVTYNIL 467
           ++ D    M R+   P++ +   +  GL        ++   K    N  L     T N +
Sbjct: 65  KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYM 124

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           +        +++   +F  M K  I+ D ++Y T+      +  + ++     +   FGF
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
           +    +Y  +I    +    T A++ + RM   G  P    Y +L+ GL K+  +D   G
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244

Query: 588 LYDSMIEKGLIPCEVT------------RITLAYEYCK--IDDCCSAMVILDRLEKKLWI 633
           L   M   GL P   T            +I  AYE  K   D+ C   V+          
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVV---------- 294

Query: 634 RTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSAR 693
            T T L+  LC+ RK+  A   F K+       +RVT    +    ++     V    + 
Sbjct: 295 -TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353

Query: 694 IYKDNRL 700
           + KD  +
Sbjct: 354 MEKDGHV 360


>AT3G06920.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:2181717-2184449 FORWARD
           LENGTH=871
          Length = 871

 Score =  209 bits (533), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 220/439 (50%), Gaps = 1/439 (0%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G+L  A E+   M   G+ PN +T+N+++   C+   +D A  +FEEM  +   PD  ++
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             ++    K+G V +A K    MLD     ++  +T +I  F   G      + +    +
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
               P+L    + ++ + K G  ++   M EE+  + + P+  +++ LI GL K G+  +
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
            + LF  + + +    +   Y  +I+G+C+  K+N+A  LL  MK +G  P   TY ++I
Sbjct: 571 TYELFYSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
           DG  K    + A+ L      +    N+  Y++++DG  K GR+ EAY +L++    GL 
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            +  T+N L+    K  +I +AL  F  M +    P+  +Y  LI   C+ ++ +++ +F
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
           ++E  + G  P+  +YT+MI G  + GN+  A   F R   +G VPDS  Y  +I GL  
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809

Query: 579 QSKLDEARGLYDSMIEKGL 597
            ++  +A  L++    +GL
Sbjct: 810 GNRAMDAFSLFEETRRRGL 828



 Score =  209 bits (531), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 219/451 (48%), Gaps = 2/451 (0%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
            C++    ++G++ EA++ VFE   +   PN  T N+++ + C  G +D A  L + M  
Sbjct: 347 NCILTCLRKMGKVDEALK-VFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G+ P+  +  +MV   CK   + EA      M  +    D  +F  +I    + G    
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A + + K  D   + N I +TS+I+     G  +   ++ ++M+ Q   P++      +D
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
            + K G  EK  R   + +++    P+  +Y+ +I+G  +    N    L   MKEQG +
Sbjct: 526 CMFKAGEPEKG-RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
            +T  Y  +IDG CK G   +A+ L+  M  +GF P + TY +++DGL K  R+ EAY +
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
            ++     +E + V Y+ LI    K   I +A  +  ++ + G+ P+++++ +L+    +
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
            + ++E+ + F+        P + TY  +I G C+      A  F+  M   G  P +I+
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           Y T+ISGL K   + EA  L+D     G +P
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVP 795



 Score =  194 bits (492), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 226/478 (47%), Gaps = 2/478 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+  +   G+  EA  ++     +G +P+    N ++    +MG VD A  +FEEM  + 
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KD 372

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P+ ++Y +++   C+ G +  A +    M   G   +  +  +++   C+      A 
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F +       P+ I F S+I+GL K G +  A+++ E+M+    + N   +T+LI   
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
              G  E   +++  ++ ++N  P++      ++   +  +  +   +   +K +  +P+
Sbjct: 493 FNHGRKEDGHKIYKDMI-NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             +Y+ LI G  KAG     ++L   M  +G   +   YN ++DG CK G+V +AY++L+
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    G E   VTY  +I    K   + +A  LF +     I+ ++  Y++LI  F +  
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           R+ E+ +  EE ++ G  P   T+ S++    +   +  A+  F  M +  C P+ + YG
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLE 628
            LI+GLCK  K ++A   +  M ++G+ P  ++  T+     K  +   A  + DR +
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789



 Score =  185 bits (469), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/540 (23%), Positives = 234/540 (43%), Gaps = 5/540 (0%)

Query: 141 LQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQ 200
            + A      ++ +F+ +      + +  +M   G  P       +++   + G VD A 
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223

Query: 201 YLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEF 260
            L +EM +  +  D   Y V + ++ K+G V  A K+   +   G   D  ++T +I   
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283

Query: 261 CEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNV 320
           C+      A+  F         P    + +MI G    G   +A+ +LE    +G  P+V
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343

Query: 321 YTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG 380
             +  ++  L K G  ++A ++F ++   ++  PN+ TY  +I+  CR  KL+ A  L  
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNLSTYNILIDMLCRAGKLDTAFELRD 401

Query: 381 RMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
            M++ GL PN  T   ++D  CK+   + A  +   M  +  +P+  T+ +++DGL K G
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
           RV +AYK+ +    +    + + Y  LI         +    ++  M      PD+    
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
           T +    +     +    FEE     F+P  R+Y+ +I G  + G      + F+ M + 
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSA 620
           GCV D+ AY  +I G CK  K+++A  L + M  KG  P  VT  ++     KID    A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641

Query: 621 MVILDRLEKK---LWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
            ++ +  + K   L +   ++L+       ++  A L   +L+      N  T  + + A
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701



 Score =  179 bits (455), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 219/512 (42%), Gaps = 5/512 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+    +  RL EAVEM   +     VP T   N ++      G  D A  L E   A+G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P   +Y  ++    KMG V EA K    M  +    + +++ ++I   C  G    A 
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAF 397

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
                    GL PN+     M++ LCK   + +A  M EEM  +   P+  T  +LIDGL
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K G  + A++++ K++ S+  + N + YT++I  +    +      +   M  Q   P+
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDC-RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
                T +D   KAG  E+   +   +    F P+  +Y+ ++ GL K G   E Y++  
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                G   D   YNI+I   CK   + +A  L  +M   G +P + +Y ++I    +  
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           R+ E+ M FEEA           Y+S+I G+ + G +  A      +   G  P+   + 
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK- 629
           +L+  L K  +++EA   + SM E    P +VT   L    CK+     A V    ++K 
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756

Query: 630 --KLWIRTATTLVRKLCSERKVGMAALFFHKL 659
             K    + TT++  L     +  A   F + 
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788



 Score =  173 bits (438), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 190/403 (47%), Gaps = 2/403 (0%)

Query: 197 DYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLI 256
           D    +  EMS  G  P   +   MV+   K   + E    + +M    F    +++T +
Sbjct: 115 DALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTL 174

Query: 257 ISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW 316
           I  F     +   L  F +  ++G +P +  FT++I G  K G +  A  +L+EM     
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234

Query: 317 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAE 376
             ++  +   ID   K G  + A++ F + + +   KP+ +TYT+MI   C+ ++L+ A 
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHE-IEANGLKPDEVTYTSMIGVLCKANRLDEAV 293

Query: 377 MLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGL 436
            +   +++   +P T  Y T+I G+  AG F+ A+ L+     +G  P++  YN I+  L
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL 353

Query: 437 CKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI 496
            K G+V EA K+ ++        +  TYNILI   C+   +  A  L   M K+G+ P++
Sbjct: 354 RKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNV 412

Query: 497 HSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR 556
            +   ++   C+ +++ E+   FEE       P + T+ S+I G  + G +  A K + +
Sbjct: 413 RTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEK 472

Query: 557 MSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           M D  C  +SI Y +LI       + ++   +Y  MI +   P
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515



 Score =  166 bits (421), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 179/357 (50%), Gaps = 3/357 (0%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   ++++F   GR ++  ++  +M NQ   P+ Q LN  M    + G  +  + +FEE+
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
            AR   PD+ SY +++    K G   E  +    M ++G ++D  ++ ++I  FC+ G  
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
            +A +   +    G +P ++ + S+I+GL K   + +A+ + EE   +  + NV  +++L
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           IDG  K G  ++A+ L L+ +  +   PN+ T+ ++++   + +++N A +    MKE  
Sbjct: 664 IDGFGKVGRIDEAY-LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
             PN  TY  LI+G CK   F +AF     M ++G  P+  +Y  ++ GL K G + EA 
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
            +      NG   D   YN +I           A +LF +  + G+   IH+ T ++
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLP--IHNKTCVV 837



 Score =  164 bits (414), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 229/511 (44%), Gaps = 5/511 (0%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           + SF ++G++  A +   E+   G+ P+  T   ++ + C+   +D A  +FE +     
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            P + +Y  M++ Y   G   EA   L     +G +    ++  I++   + G    AL+
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
            F +       PNL  +  +I+ LC+ G +  AFE+ + M   G  PNV T   ++D LC
Sbjct: 365 VFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
           K    ++A  +F ++   +   P+ +T+ ++I+G  +  +++ A  +  +M +     N+
Sbjct: 424 KSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
             YT+LI      G  E    +   M  +  SP++   N  +D + K G  ++   M ++
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
                   D  +Y+ILI    K     +   LF  M + G   D  +Y  +I  FC+  +
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
           ++++    EE    GF PT  TY S+I G  +   L  A   F          + + Y +
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKL 631
           LI G  K  ++DEA  + + +++KGL P   T  +L     K ++   A+V    +++  
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722

Query: 632 WIRTATT---LVRKLCSERKVGMAALFFHKL 659
                 T   L+  LC  RK   A +F+ ++
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753



 Score =  139 bits (350), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 192/438 (43%), Gaps = 17/438 (3%)

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
           A    R++ + +++   P   N   ++   C+  +     ++L EM   G+ P+V T   
Sbjct: 81  AIEYFRWYERRTELPHCPESYNSLLLVMARCR--NFDALDQILGEMSVAGFGPSVNTCIE 138

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL---GRM 382
           ++ G  K     + + + ++++R    +P    YT +I  +     +N ++M+L    +M
Sbjct: 139 MVLGCVKANKLREGYDV-VQMMRKFKFRPAFSAYTTLIGAF---SAVNHSDMMLTLFQQM 194

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           +E G  P  + +TTLI G  K G  + A  L++ M       +I  YN  +D   K G+V
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
             A+K   +   NGL+ D+VTY  +I   CK   + +A+ +F  + K+   P  ++Y T+
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGC 562
           I  +    +  E+    E     G IP+   Y  ++    + G +  A+K F  M     
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA- 373

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMV 622
            P+   Y  LI  LC+  KLD A  L DSM + GL P   T   +    CK      A  
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433

Query: 623 ILDRLEKKLWIRTATT---LVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACY 679
           + + ++ K+      T   L+  L    +V  A   + K+LD D   N +   + +   +
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493

Query: 680 ESNKYALVSDLSARIYKD 697
              +     +   +IYKD
Sbjct: 494 NHGR----KEDGHKIYKD 507



 Score = 73.2 bits (178), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 86/193 (44%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           +   ++  F ++GR+ EA  ++ E+  +G+ PN  T N ++    +   ++ A   F+ M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
                 P+  +Y +++   CK+    +A  +   M  +G      S+T +IS   + G  
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             A   F +F   G  P+   + +MIEGL        AF + EE   +G   +  T   L
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVL 838

Query: 327 IDGLCKKGWTEKA 339
           +D L K    E+A
Sbjct: 839 LDTLHKNDCLEQA 851


>AT5G41170.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr5:16478860-16480443 REVERSE
           LENGTH=527
          Length = 527

 Score =  209 bits (532), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 222/450 (49%), Gaps = 4/450 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++   A++ +    + +   +   G+  +  T NL+M   C+      A     +M   G
Sbjct: 78  LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD  ++  ++  +C    + EA   ++ M++ G   D   +T II   C+ G    AL
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F +  + G++P+++ +TS++ GLC  G  + A  +L  M  +  KP+V T  ALID  
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K+G    A  L+ +++R  +  PN+ TYT++ING+C +  ++ A  +   M+ +G  P+
Sbjct: 258 VKEGKFLDAEELYNEMIRM-SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
              YT+LI+G CK    + A  +   MS++G + N  TY  ++ G  + G+   A ++  
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAK---SGIQPDIHSYTTLIAVFC 507
                G+  +  TYN+L+   C    +K+AL +F  M K    G+ P+I +Y  L+   C
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
              ++ ++ M FE+  +        TYT +I G C+ G +  A+  F  +   G  P+ +
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496

Query: 568 AYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
            Y T+ISGL ++    EA  L+  M E G+
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  208 bits (530), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 221/451 (49%), Gaps = 4/451 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +  EA+++   M     +P+      ++ +  +M   D    L + +   GV  D  +  
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++  +C+      A  +L  M+  GF  D  +FT +I+ FC       A+   ++  +M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+KP+++ +T++I+ LCK G +  A  + ++M   G +P+V  +T+L++GLC  G    A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             L L+ +     KP+V+T+ A+I+ + ++ K   AE L   M    + PN  TYT+LI+
Sbjct: 232 DSL-LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G C  G  + A  +  LM  +G  P++  Y ++++G CK  +V +A K+  +    GL  
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           + +TY  LI    +      A  +FS M   G+ P+I +Y  L+   C   ++ ++ M F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410

Query: 520 EEAVRF---GFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
           E+  +    G  P   TY  ++ G C  G L  A+  F  M         I Y  +I G+
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470

Query: 577 CKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           CK  K+  A  L+ S+  KG+ P  VT  T+
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM 501



 Score =  193 bits (490), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 220/451 (48%), Gaps = 14/451 (3%)

Query: 222 VVAYCKMGNVLEADKWLSVMLD-------RGFLVDNASFTLIISEFCEKGFATRALRYFH 274
           ++ + K+ NV+   K   V+++        G   D  +  L+++ FC+      A  +  
Sbjct: 72  IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           K   +G +P+++ FTS+I G C    +++A  M+ +MV  G KP+V  +T +ID LCK G
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
               A  LF ++  +   +P+V+ YT+++NG C   +   A+ LL  M ++ + P+  T+
Sbjct: 192 HVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
             LID   K G F  A +L N M R   +PNI TY ++++G C +G V EA +M      
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
            G   D V Y  LI+  CK   +  A+ +F +M++ G+  +  +YTTLI  F +  + + 
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH---GCVPDSIAYGT 571
           ++  F   V  G  P  RTY  ++   C  G +  A+  F  M      G  P+   Y  
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK-- 629
           L+ GLC   KL++A  +++ M ++ +    +T   +    CK     +A+ +   L    
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490

Query: 630 -KLWIRTATTLVRKLCSERKVGMAALFFHKL 659
            K  + T TT++  L  E     A + F K+
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521



 Score =  181 bits (459), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 193/385 (50%), Gaps = 11/385 (2%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P++I+FT ++  + K         + + +   G   ++YT   L++  C+      A   
Sbjct: 70  PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
             K+++    +P+++T+T++ING+C  +++  A  ++ +M E G+ P+   YTT+ID  C
Sbjct: 130 LGKMMKL-GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           K G+   A  L + M   G  P++  Y ++V+GLC  GR ++A  +L+      ++ D +
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           T+N LI    K+     A  L+++M +  I P+I +YT+LI  FC E  + E+   F   
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
              G  P    YTS+I G+C+   +  A+K F+ MS  G   ++I Y TLI G  +  K 
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK--------LWIR 634
           + A+ ++  M+ +G+ P   T   L +  C       A++I + ++K+        +W  
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW-- 426

Query: 635 TATTLVRKLCSERKVGMAALFFHKL 659
           T   L+  LC   K+  A + F  +
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDM 451



 Score =  174 bits (441), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 175/363 (48%), Gaps = 10/363 (2%)

Query: 303 QAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL---VRSENNKPNVLTY 359
           +A ++   MV     P++   T L++ + K     K F + + L   ++      ++ T 
Sbjct: 55  EALDLFTHMVESRPLPSIIDFTKLLNVIAKM----KKFDVVINLCDHLQIMGVSHDLYTC 110

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
             ++N +C+  +   A   LG+M + G  P+  T+T+LI+G C     E A  ++N M  
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
            G  P++  Y  I+D LCK G V  A  +     + G+  D V Y  L++  C     + 
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230

Query: 480 ALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMIC 539
           A +L   M K  I+PD+ ++  LI  F +E +  ++E  + E +R    P   TYTS+I 
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290

Query: 540 GYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           G+C EG +  A + F+ M   GC PD +AY +LI+G CK  K+D+A  ++  M +KGL  
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350

Query: 600 CEVTRITLAYEYCKIDDCCSAMVILDRLEKK---LWIRTATTLVRKLCSERKVGMAALFF 656
             +T  TL   + ++     A  +   +  +     IRT   L+  LC   KV  A + F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410

Query: 657 HKL 659
             +
Sbjct: 411 EDM 413



 Score =  126 bits (317), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 162/364 (44%), Gaps = 23/364 (6%)

Query: 78  LHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIG 137
           + + I PD + +    T + SL  N     ALS F     Y   R  + +Y      L  
Sbjct: 169 VEMGIKPDVVMY---TTIIDSLCKNGHVNYALSLFDQMENYG-IRPDVVMYTSLVNGLCN 224

Query: 138 NGNLQKAHEVMQCMVR---------------SFAEIGRLKEAVEMVFEMHNQGMVPNTQT 182
           +G  + A  +++ M +               +F + G+  +A E+  EM    + PN  T
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284

Query: 183 LNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVML 242
              ++   C  G VD A+ +F  M  +G  PD  +Y  ++  +CK   V +A K    M 
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344

Query: 243 DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIK 302
            +G   +  ++T +I  F + G    A   F      G+ PN+  +  ++  LC  G +K
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404

Query: 303 QAFEMLEEMV---CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
           +A  + E+M      G  PN++T+  L+ GLC  G  EKA  +F  + + E +   ++TY
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI-GIITY 463

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
           T +I G C+  K+  A  L   +  +G+ PN  TYTT+I G  + G    A  L   M  
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523

Query: 420 EGFS 423
           +G S
Sbjct: 524 DGVS 527



 Score =  108 bits (271), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 3/310 (0%)

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
           + N A  L   M E   +P+   +T L++   K   F+   +L + +   G S ++ T N
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            +++  C+  +   A   L      G E D VT+  LI+  C    +++A+++ ++M + 
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           GI+PD+  YTT+I   C+   ++ +   F++   +G  P    YTS++ G C  G    A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
                 M+     PD I +  LI    K+ K  +A  LY+ MI   + P   T  +L   
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291

Query: 611 YCK---IDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVN 667
           +C    +D+      +++       +   T+L+   C  +KV  A   F+++       N
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351

Query: 668 RVTLAAFMTA 677
            +T    +  
Sbjct: 352 TITYTTLIQG 361


>AT2G32630.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr2:13844834-13846708 FORWARD
           LENGTH=624
          Length = 624

 Score =  209 bits (532), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 219/427 (51%), Gaps = 1/427 (0%)

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP 283
            Y   G   E  +    M+ +G  +D  S  + +    ++      L  F +  D G+K 
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKI 222

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF 343
            + + T ++EGLC+RG ++++ ++++E   +G KP  YT+  +I+   K+          
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ-RDFSGVEGV 281

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK 403
           LK+++ +    N +TYT ++    ++ K++ AE L   M+E+G+  + + YT+LI  +C+
Sbjct: 282 LKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCR 341

Query: 404 AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
            GN +RAF L + ++ +G SP+  TY A++DG+CK G +  A  ++ +    G+   +V 
Sbjct: 342 KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
           +N LI  +C++  + +A  ++  M + G Q D+ +  T+ + F R KR  E++ +    +
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461

Query: 524 RFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
             G   +  +YT++I  YC+EGN+  A + F  MS  G  P++I Y  +I   CKQ K+ 
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521

Query: 584 EARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKL 643
           EAR L  +M   G+ P   T  +L +  C  D+   AM +   +  K   + + T    +
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581

Query: 644 CSERKVG 650
               K G
Sbjct: 582 SGLSKAG 588



 Score =  204 bits (518), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 218/437 (49%), Gaps = 36/437 (8%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R+   +E+   M + G+     +L +V++  C  G V+ ++ L +E S +G+ P++ +Y 
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            ++ AY K  +    +  L VM   G + +  ++TL                        
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL------------------------ 299

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
                      ++E   K G +  A ++ +EM  +G + +V+ +T+LI   C+KG  ++A
Sbjct: 300 -----------LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           F LF +L   +   P+  TY A+I+G C+  ++  AE+L+  M+ +G+      + TLID
Sbjct: 349 FLLFDELTE-KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G+C+ G  + A  + ++M ++GF  ++ T N I     +  R  EA + L      G++ 
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
             V+Y  LI  +CK+ ++++A  LF +M+  G+QP+  +Y  +I  +C++ ++ E+    
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
                 G  P   TYTS+I G C   N+  A++ F  M   G   +S+ Y  +ISGL K 
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587

Query: 580 SKLDEARGLYDSMIEKG 596
            K DEA GLYD M  KG
Sbjct: 588 GKSDEAFGLYDEMKRKG 604



 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 79/201 (39%), Gaps = 3/201 (1%)

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
           ++ L +F  M K G+  D  S    +    + +R+      F   V  G   T  + T +
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
           + G CR G +  + K     S  G  P++  Y T+I+   KQ       G+   M + G+
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290

Query: 598 IPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW---IRTATTLVRKLCSERKVGMAAL 654
           +  +VT   L     K      A  + D + ++     +   T+L+   C +  +  A L
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350

Query: 655 FFHKLLDMDFHVNRVTLAAFM 675
            F +L +     +  T  A +
Sbjct: 351 LFDELTEKGLSPSSYTYGALI 371


>AT3G09060.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:2766367-2768430 REVERSE
           LENGTH=687
          Length = 687

 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/543 (25%), Positives = 248/543 (45%), Gaps = 37/543 (6%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ +F E  +  +   +       G+ PN QT N+++K++C+    + A+   + M   G
Sbjct: 120 LLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG 179

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD  SY  ++    K G + +A +    M +RG   D   + ++I  F ++     A+
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239

Query: 271 RYFHKF-SDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
             + +   D  + PN+     MI GL K G +    ++ E M     + ++YT+++LI G
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299

Query: 330 LCKKGWTEKAFRLFLKL---------------------------------VRSENNKPNV 356
           LC  G  +KA  +F +L                                 +    N  N+
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNI 359

Query: 357 LTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNL 416
           ++Y  +I G   + K++ A M+   M  +G   +  TY   I G C  G   +A  +M  
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           +   G   ++  Y +I+D LCKK R++EA  ++K+   +G+E +    N LI    + + 
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
           + +A     +M K+G +P + SY  LI   C+  +  E+  F +E +  G+ P  +TY+ 
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           ++CG CR+  + +A++ +H+    G   D + +  LI GLC   KLD+A  +  +M  + 
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599

Query: 597 LIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAA 653
                VT  TL   + K+ D   A VI   + K   +  I +  T+++ LC  R V  A 
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAM 659

Query: 654 LFF 656
            FF
Sbjct: 660 EFF 662



 Score =  206 bits (524), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 226/487 (46%), Gaps = 35/487 (7%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           G  P  ++ N ++    E       + LF      GV P+  +Y V++   CK     +A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
             +L  M   GF  D  S++ +I++  + G    AL  F + S+ G+ P++  +  +I+G
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228

Query: 295 LCKRGSIKQAFEMLEEMV-CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
             K    K A E+ + ++      PNV TH  +I GL K G  +   +++ ++ ++E  K
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
            ++ TY+++I+G C    +++AE +   + E+    +  TY T++ G C+ G  + + +L
Sbjct: 289 -DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL 347

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
             +M  +  S NI +YN ++ GL + G++ EA  + +     G  ADK TY I I   C 
Sbjct: 348 WRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
              + +AL +  ++  SG   D+++Y ++I   C++KR+ E+    +E  + G       
Sbjct: 407 NGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466

Query: 534 YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
             ++I G  R+  L  A  F   M  +GC P  ++Y  LI GLCK  K  EA      M+
Sbjct: 467 CNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526

Query: 594 EKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAA 653
           E G  P                                 ++T + L+  LC +RK+ +A 
Sbjct: 527 ENGWKPD--------------------------------LKTYSILLCGLCRDRKIDLAL 554

Query: 654 LFFHKLL 660
             +H+ L
Sbjct: 555 ELWHQFL 561



 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 199/433 (45%), Gaps = 10/433 (2%)

Query: 171 MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGN 230
           + +  + PN +T N+++    + G VD    ++E M       D  +Y  ++   C  GN
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305

Query: 231 VLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYF----HKFSDMGLKPNLI 286
           V +A+   + + +R   +D  ++  ++  FC  G    +L  +    HK S      N++
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS-----VNIV 360

Query: 287 NFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 346
           ++  +I+GL + G I +A  +   M  +G+  +  T+   I GLC  G+  KA  + ++ 
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV-MQE 419

Query: 347 VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN 406
           V S     +V  Y ++I+  C+  +L  A  L+  M + G+  N++    LI G  +   
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
              A   +  M + G  P + +YN ++ GLCK G+  EA   +K+   NG + D  TY+I
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           L+   C+   I  AL L+ +  +SG++ D+  +  LI   C   ++ ++           
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
                 TY +++ G+ + G+   A   +  M   G  PD I+Y T++ GLC    +  A 
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAM 659

Query: 587 GLYDSMIEKGLIP 599
             +D     G+ P
Sbjct: 660 EFFDDARNHGIFP 672



 Score =  166 bits (421), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 200/437 (45%), Gaps = 5/437 (1%)

Query: 143 KAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYL 202
           K H +M   +   ++ GR+ + +++   M       +  T + ++   C+ G VD A+ +
Sbjct: 256 KTHNIM---ISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312

Query: 203 FEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCE 262
           F E+  R    D  +Y  M+  +C+ G + E+ +   +M  +   V+  S+ ++I    E
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS-VNIVSYNILIKGLLE 371

Query: 263 KGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYT 322
            G    A   +      G   +   +   I GLC  G + +A  +++E+   G   +VY 
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYA 431

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
           + ++ID LCKK   E+A  L +K +     + N     A+I G  RD +L  A   L  M
Sbjct: 432 YASIIDCLCKKKRLEEASNL-VKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
            + G  P   +Y  LI G CKAG F  A   +  M   G+ P++ TY+ ++ GLC+  ++
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
             A ++      +GLE D + +NILI   C    +  A+ + + M       ++ +Y TL
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGC 562
           +  F +    + + + +    + G  P   +Y +++ G C    ++ A++FF    +HG 
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670

Query: 563 VPDSIAYGTLISGLCKQ 579
            P    +  L+  +  +
Sbjct: 671 FPTVYTWNILVRAVVNR 687


>AT1G30290.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:10670320-10672740 REVERSE
           LENGTH=806
          Length = 806

 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 243/515 (47%), Gaps = 16/515 (3%)

Query: 97  ASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVR--- 153
           A L       VAL FF+WA    R+RH   +Y      L      Q +  V+  M R   
Sbjct: 179 AVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGI 238

Query: 154 ------------SFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQY 201
                       S++  G+L++A++++  M   G+ PN    N  + +      ++ A  
Sbjct: 239 YRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR 298

Query: 202 LFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFC 261
             E M   G+ P+  +Y  M+  YC +  V EA + L  M  +G L D  S+  I+   C
Sbjct: 299 FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLC 358

Query: 262 EKGFATRALRYFHKFS-DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNV 320
           ++           K + + GL P+ + + ++I  L K     +A   L++   +G++ + 
Sbjct: 359 KEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDK 418

Query: 321 YTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG 380
             ++A++  LCK+G   +A  L  +++   +  P+V+TYTA++NG+CR  ++++A+ LL 
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478

Query: 381 RMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
            M   G  PNT +YT L++G C+ G    A ++MN+     +SPN  TY+ I+ GL ++G
Sbjct: 479 VMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREG 538

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
           ++ EA  ++++    G     V  N+L+   C+     +A     +    G   ++ ++T
Sbjct: 539 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 598

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
           T+I  FC+   +  +    ++           TYT+++    ++G +  A +   +M   
Sbjct: 599 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK 658

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
           G  P  + Y T+I   C+  K+D+   + + MI +
Sbjct: 659 GIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693



 Score =  186 bits (473), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 236/486 (48%), Gaps = 40/486 (8%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
           CM+R + ++ R++EA+E++ +MH++G +P+  +   +M   C+   +   + L ++M+  
Sbjct: 317 CMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE 376

Query: 210 -GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G+ PD  +Y  ++    K  +  EA  +L    ++GF +D   ++ I+   C++G  + 
Sbjct: 377 HGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSE 436

Query: 269 ALRYFHKFSDMG-LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
           A    ++    G   P+++ +T+++ G C+ G + +A ++L+ M   G KPN  ++TAL+
Sbjct: 437 AKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALL 496

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA-----EMLL--- 379
           +G+C+ G + +A R  + +       PN +TY+ +++G  R+ KL+ A     EM+L   
Sbjct: 497 NGMCRTGKSLEA-REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 555

Query: 380 -----------------GRMKE----------QGLIPNTNTYTTLIDGHCKAGNFERAFD 412
                            GR  E          +G   N   +TT+I G C+    + A  
Sbjct: 556 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 615

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           +++ M       ++ TY  +VD L KKGR+ EA +++K   H G++   VTY  +I  +C
Sbjct: 616 VLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYC 675

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           +   +   +A+  KM        I  Y  +I   C   ++ E++    + +R       +
Sbjct: 676 QMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAK 733

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           T  +++ GY ++G    A K   RM +   +PD      L   L  + K+DEA  L   +
Sbjct: 734 TCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRL 793

Query: 593 IEKGLI 598
           +E+G I
Sbjct: 794 VERGHI 799



 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 87/207 (42%), Gaps = 2/207 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F +   L  A+ ++ +M+      +  T   ++    + G +  A  L ++M  +G
Sbjct: 600 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 659

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P   +YR ++  YC+MG V +    L  M+ R        +  +I + C  G    A 
Sbjct: 660 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC--RTIYNQVIEKLCVLGKLEEAD 717

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               K      + +     +++EG  K+G    A+++   M  +   P+V     L   L
Sbjct: 718 TLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRL 777

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVL 357
             KG  ++A +L L+LV   +  P  L
Sbjct: 778 VLKGKVDEADKLMLRLVERGHISPQSL 804


>AT1G63070.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr1:23385324-23387167 REVERSE LENGTH=590
          Length = 590

 Score =  207 bits (528), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 214/438 (48%), Gaps = 1/438 (0%)

Query: 148 MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS 207
           +  ++  F    R+ EAV +V +M   G  P+T T   ++    +      A  L E M 
Sbjct: 148 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 207

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
            +G  PD  +Y  ++   CK G    A   L+ M       D   +  II   C+     
Sbjct: 208 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
            A   F+K    G+KP++  +  +I  LC  G    A  +L +M+ +   P++    ALI
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           D   K+G   +A +L+ ++V+S++  P+V+ Y  +I G+C+  ++     +   M ++GL
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
           + NT TYTTLI G  +A + + A  +   M  +G  P+I TYN ++DGLC  G V+ A  
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           + +      ++ D VTY  +I   CK   ++    LF  ++  G++P++ +YTT+++ FC
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
           R+    E++  F E    G +P   TY ++I    R+G+   + +    M   G   D+ 
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567

Query: 568 AYGTLISGLCKQSKLDEA 585
            +G L++ +    +LD++
Sbjct: 568 TFG-LVTNMLHDGRLDKS 584



 Score =  205 bits (522), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 231/455 (50%), Gaps = 2/455 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +L +A+ +  +M      P+    + ++    +M   D    L E+M   G+  +  +Y 
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           + +  +C+   +  A   L  M+  G+     +   +++ FC     + A+    +  +M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G +P+ + FT+++ GL +     +A  ++E MV +G +P++ T+ A+I+GLCK+G  + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             L  K+ + +  + +V+ Y  +I+G C+   ++ A  L  +M+ +G+ P+  TY  LI 
Sbjct: 235 LNLLNKMEKGKI-EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG-LE 458
             C  G +  A  L++ M  +  +P++  +NA++D   K+G++ EA K+  +   +    
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            D V YN LI   CK   +++ + +F +M++ G+  +  +YTTLI  F + +    ++M 
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
           F++ V  G  P   TY  ++ G C  GN+  A+  F  M       D + Y T+I  LCK
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473

Query: 579 QSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
             K+++   L+ S+  KG+ P  VT  T+   +C+
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508



 Score =  199 bits (507), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 216/459 (47%), Gaps = 4/459 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ + A++ +    + +  +M N G+  N  T ++ +   C    +  A  +  +M   G
Sbjct: 81  LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG 140

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P   +   ++  +C    + EA   +  M++ G+  D  +FT ++    +   A+ A+
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +    G +P+L+ + ++I GLCKRG    A  +L +M     + +V  +  +IDGL
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK    + AF LF K+  ++  KP+V TY  +I+  C   + + A  LL  M E+ + P+
Sbjct: 261 CKYKHMDDAFDLFNKM-ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLM--SREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
              +  LID   K G    A  L + M  S+  F P++  YN ++ G CK  RV+E  ++
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF-PDVVAYNTLIKGFCKYKRVEEGMEV 378

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
            ++    GL  + VTY  LI    +  D   A  +F +M   G+ PDI +Y  L+   C 
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
              +  + + FE   +        TYT+MI   C+ G +      F  +S  G  P+ + 
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           Y T++SG C++   +EA  L+  M E G +P   T  TL
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537



 Score =  199 bits (506), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 211/435 (48%), Gaps = 4/435 (0%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           +  F    +L  A+ ++ +M   G  P+  TLN ++   C    +  A  L ++M   G 
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            PD+ ++  +V    +     EA   +  M+ +G   D  ++  +I+  C++G    AL 
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
             +K     ++ +++ + ++I+GLCK   +  AF++  +M  +G KP+V+T+  LI  LC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM-KEQGLIPN 390
             G    A RL   ++  +N  P+++ + A+I+ + ++ KL  AE L   M K +   P+
Sbjct: 297 NYGRWSDASRLLSDMLE-KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
              Y TLI G CK    E   ++   MS+ G   N  TY  ++ G  +      A  + K
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
               +G+  D +TYNIL+   C   +++ AL +F  M K  ++ DI +YTT+I   C+  
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           ++ +    F      G  P   TYT+M+ G+CR+G    A   F  M + G +P+S  Y 
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535

Query: 571 TLISGLCKQSKLDEA 585
           TLI    +    DEA
Sbjct: 536 TLIRARLRDG--DEA 548



 Score =  186 bits (473), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 200/408 (49%), Gaps = 5/408 (1%)

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
            +  ++G+  NL  ++  I   C+R  +  A  +L +M+  G+ P++ T  +L++G C  
Sbjct: 99  EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
               +A  L  ++V     +P+ +T+T +++G  + +K + A  L+ RM  +G  P+  T
Sbjct: 159 NRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           Y  +I+G CK G  + A +L+N M +     ++  YN I+DGLCK   + +A+ +     
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
             G++ D  TYN LIS  C       A  L S M +  I PD+  +  LI  F +E ++ 
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337

Query: 514 ESEMFFEEAVRFGF-IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
           E+E  ++E V+     P    Y ++I G+C+   +   ++ F  MS  G V +++ Y TL
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK--- 629
           I G  +    D A+ ++  M+  G+ P  +T   L    C   +  +A+V+ + ++K   
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457

Query: 630 KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
           KL I T TT++  LC   KV      F  L       N VT    M+ 
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505



 Score =  162 bits (410), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 197/448 (43%), Gaps = 52/448 (11%)

Query: 301 IKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN---KPNVL 357
           +  A  +  +MV     P++   + L+  + K       F L + L     N     N+ 
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKM----NKFDLVISLGEQMQNLGISHNLY 111

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMK---------------------------------- 383
           TY+  IN +CR  +L+ A  +LG+M                                   
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 384 -EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
            E G  P+T T+TTL+ G  +      A  L+  M  +G  P++ TY A+++GLCK+G  
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
             A  +L       +EAD V YN +I   CK   +  A  LF+KM   GI+PD+ +Y  L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM--SDH 560
           I+  C   R S++     + +     P    + ++I  + +EG L  A K +  M  S H
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSA 620
            C PD +AY TLI G CK  +++E   ++  M ++GL+   VT  TL + + +  DC +A
Sbjct: 352 -CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410

Query: 621 MVILDRLEKKLW---IRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
            ++  ++        I T   L+  LC+   V  A + F  +   D  ++ VT    + A
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470

Query: 678 CYESNK----YALVSDLSARIYKDNRLT 701
             ++ K    + L   LS +  K N +T
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVKPNVVT 498



 Score =  139 bits (349), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 158/332 (47%), Gaps = 2/332 (0%)

Query: 139 GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           G ++    +   ++    +   + +A ++  +M  +G+ P+  T N ++   C  G    
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVML-DRGFLVDNASFTLII 257
           A  L  +M  + ++PD   +  ++ A+ K G ++EA+K    M+  +    D  ++  +I
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363

Query: 258 SEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
             FC+       +  F + S  GL  N + +T++I G  +      A  + ++MV  G  
Sbjct: 364 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
           P++ T+  L+DGLC  G  E A  +F + ++  + K +++TYT MI   C+  K+     
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVF-EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
           L   +  +G+ PN  TYTT++ G C+ G  E A  L   M  +G  PN  TYN ++    
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542

Query: 438 KKGRVQEAYKMLKDGFHNGLEADKVTYNILIS 469
           + G    + +++K+    G   D  T+ ++ +
Sbjct: 543 RDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574



 Score =  113 bits (282), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 122/265 (46%), Gaps = 1/265 (0%)

Query: 368 RDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC 427
           +D KL+ A  L G M +    P+   ++ L+    K   F+    L   M   G S N+ 
Sbjct: 52  QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111

Query: 428 TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM 487
           TY+  ++  C++ ++  A  +L      G     VT N L++  C    I +A+AL  +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 488 AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNL 547
            + G QPD  ++TTL+    +  + SE+    E  V  G  P   TY ++I G C+ G  
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231

Query: 548 TMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
            +A+   ++M       D + Y T+I GLCK   +D+A  L++ M  KG+ P   T   L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291

Query: 608 AYEYCKIDDCCSAMVIL-DRLEKKL 631
               C       A  +L D LEK +
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNI 316


>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
           superfamily protein | chr4:10868400-10870382 REVERSE
           LENGTH=660
          Length = 660

 Score =  207 bits (528), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 218/432 (50%), Gaps = 8/432 (1%)

Query: 179 NTQTLNLVMKIACEMGL----VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           + ++ N V+ +    GL    +++  Y+        + P+  S+ +++ A CK+  V  A
Sbjct: 147 SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRA 206

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
            +    M +R  L D  ++  ++   C++     A+    +    G  P+ + +  +I+G
Sbjct: 207 IEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDG 266

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
           LCK+G + +  ++++ M  +G  PN  T+  LI GLC KG  +KA  L  ++V S+   P
Sbjct: 267 LCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK-CIP 325

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           N +TY  +ING  +  +   A  LL  M+E+G   N + Y+ LI G  K G  E A  L 
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
             M+ +G  PNI  Y+ +VDGLC++G+  EA ++L     +G   +  TY+ L+    K 
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKT 445

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
              ++A+ ++ +M K+G   +   Y+ LI   C   R+ E+ M + + +  G  P    Y
Sbjct: 446 GLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAY 505

Query: 535 TSMICGYCREGNLTMAIKFFHRM---SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
           +S+I G C  G++  A+K +H M    +    PD + Y  L+ GLC Q  +  A  L +S
Sbjct: 506 SSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNS 565

Query: 592 MIEKGLIPCEVT 603
           M+++G  P  +T
Sbjct: 566 MLDRGCDPDVIT 577



 Score =  200 bits (508), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 227/465 (48%), Gaps = 16/465 (3%)

Query: 252 SFTLIISEFCEKGFATRALRYF----HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEM 307
           SF  +++    +G   R L ++    +   +M + PN ++F  +I+ LCK   + +A E+
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209

Query: 308 LEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYC 367
              M  +   P+ YT+  L+DGLCK+   ++A  L L  ++SE   P+ + Y  +I+G C
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV-LLLDEMQSEGCSPSPVIYNVLIDGLC 268

Query: 368 RDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC 427
           +   L R   L+  M  +G +PN  TY TLI G C  G  ++A  L+  M      PN  
Sbjct: 269 KKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDV 328

Query: 428 TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM 487
           TY  +++GL K+ R  +A ++L      G   ++  Y++LIS   K+   ++A++L+ KM
Sbjct: 329 TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388

Query: 488 AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNL 547
           A+ G +P+I  Y+ L+   CRE + +E++      +  G +P   TY+S++ G+ + G  
Sbjct: 389 AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLC 448

Query: 548 TMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
             A++ +  M   GC  +   Y  LI GLC   ++ EA  ++  M+  G+ P  V   ++
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508

Query: 608 AYEYCKIDDCCSA------MVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLD 661
               C I    +A      M+  +  + +  + T   L+  LC ++ +  A    + +LD
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568

Query: 662 MDFHVNRVTLAAFMTACYESNKY-----ALVSDLSARIYKDNRLT 701
                + +T   F+    E +       + + +L  R+ K  R++
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVS 613



 Score =  193 bits (491), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 241/518 (46%), Gaps = 50/518 (9%)

Query: 138 NGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVD 197
           N N+         ++++  ++  +  A+E+   M  +  +P+  T   +M   C+   +D
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239

Query: 198 YAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLII 257
            A  L +EM + G  P    Y V++   CK G++    K +  M  +G + +  ++  +I
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299

Query: 258 SEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
              C KG   +A+    +       PN + + ++I GL K+     A  +L  M  +G+ 
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
            N + ++ LI GL K+G  E+A  L+ K+   +  KPN++ Y+ +++G CR+ K N A+ 
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAE-KGCKPNIVVYSVLVDGLCREGKPNEAKE 418

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
           +L RM   G +PN  TY++L+ G  K G  E A  +   M + G S N   Y+ ++DGLC
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478

Query: 438 KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIH 497
             GRV+EA  +       G++ D V Y+ +I   C    +  AL L+ +M          
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM---------- 528

Query: 498 SYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
                    C+E+  S+ ++               TY  ++ G C + +++ A+   + M
Sbjct: 529 --------LCQEEPKSQPDVV--------------TYNILLDGLCMQKDISRAVDLLNSM 566

Query: 558 SDHGCVPDSIAYGTLISGLCKQSK-LDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD 616
            D GC PD I   T ++ L ++S   D+ R   + ++ + L            +  ++  
Sbjct: 567 LDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLL------------KRQRVSG 614

Query: 617 CCSAMVILDRLEKKLWIRTAT--TLVRKLCSERKVGMA 652
            C+ + ++  L K L  +T+T   +VR++C  +K+  A
Sbjct: 615 ACTIVEVM--LGKYLAPKTSTWAMIVREICKPKKINAA 650



 Score =  171 bits (432), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 212/463 (45%), Gaps = 40/463 (8%)

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           M+ +Y   G+    +K LS +     ++   SF ++   + +     +A+  FH+  D  
Sbjct: 83  MIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD-- 140

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF 340
                       E  CKR                    +V +  ++++ +  +G   +  
Sbjct: 141 ------------EFRCKR--------------------SVKSFNSVLNVIINEGLYHRGL 168

Query: 341 RLFLKLVRSENN---KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
             +  +V S  N    PN L++  +I   C+   ++RA  +   M E+  +P+  TY TL
Sbjct: 169 EFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTL 228

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           +DG CK    + A  L++ M  EG SP+   YN ++DGLCKKG +    K++ + F  G 
Sbjct: 229 MDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGC 288

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
             ++VTYN LI   C +  + +A++L  +M  S   P+  +Y TLI    +++R +++  
Sbjct: 289 VPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVR 348

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
                   G+   +  Y+ +I G  +EG    A+  + +M++ GC P+ + Y  L+ GLC
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408

Query: 578 KQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTA- 636
           ++ K +EA+ + + MI  G +P   T  +L   + K   C  A+ +   ++K    R   
Sbjct: 409 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468

Query: 637 --TTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
             + L+  LC   +V  A + + K+L +    + V  ++ +  
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKG 511



 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 130/292 (44%), Gaps = 25/292 (8%)

Query: 145 HEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFE 204
             +   ++    + G+ +EA+ +  +M  +G  PN    ++++   C  G  + A+ +  
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421

Query: 205 EMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKG 264
            M A G  P++ +Y  ++  + K G   EA +    M   G   +   ++++I   C  G
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ---GWKPNVY 321
               A+  + K   +G+KP+ + ++S+I+GLC  GS+  A ++  EM+CQ     +P+V 
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN------GYCRDDKLNRA 375
           T+  L+DGLC +    +A  L   ++      P+V+T    +N        C   +    
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSML-DRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600

Query: 376 EMLLGRMKEQG---------------LIPNTNTYTTLIDGHCKAGNFERAFD 412
           E+++  +K Q                L P T+T+  ++   CK      A D
Sbjct: 601 ELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652


>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
           chr2:16381647-16384250 FORWARD LENGTH=867
          Length = 867

 Score =  206 bits (524), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 251/554 (45%), Gaps = 74/554 (13%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
           Q ++R+     + +EAV++   + ++G  P+    +L ++ AC+   +  A  L  EM  
Sbjct: 243 QLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRG 302

Query: 209 R-GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
           + GV     +Y  ++VA+ K GN+ EA + +  M+  G  +   + T +++ +C+     
Sbjct: 303 KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELG 362

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP-NVYTHTAL 326
           +AL  F++  + GL P+ + F+ M+E  CK   +++A E    M      P +V  HT +
Sbjct: 363 KALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHT-M 421

Query: 327 IDG----------------------------------LCKKGWTEKAFRLFLKLVRSENN 352
           I G                                   CK+G  + A   FLK++  +  
Sbjct: 422 IQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATS-FLKMMEQKGI 480

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           +PNV+ Y  M+  +CR   ++ A  +   M E+GL PN  TY+ LIDG  K  + + A+D
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWD 540

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK-------------------DGF 453
           ++N M+   F  N   YN I++GLCK G+  +A +ML+                   DGF
Sbjct: 541 VINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600

Query: 454 -----------------HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI 496
                             NG   + VT+  LI+  CK   +  AL +  +M    ++ D+
Sbjct: 601 VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL 660

Query: 497 HSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR 556
            +Y  LI  FC++  M  +   F E    G +P    Y S+I G+   G +  AI  + +
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720

Query: 557 MSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD 616
           M + G   D   Y T+I GL K   ++ A  LY  +++ G++P E+  + L     K   
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780

Query: 617 CCSAMVILDRLEKK 630
              A  +L+ ++KK
Sbjct: 781 FLKASKMLEEMKKK 794



 Score =  196 bits (497), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 203/394 (51%), Gaps = 4/394 (1%)

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
           N +  + C+ G VD A    + M  +G+ P+   Y  M++A+C+M N+  A    S ML+
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ 303
           +G   +N +++++I  F +      A    ++ +    + N + + ++I GLCK G   +
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572

Query: 304 AFEMLEEMVCQG-WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK-PNVLTYTA 361
           A EML+ ++ +  +  +  ++ ++IDG  K G T+ A   + ++  SEN K PNV+T+T+
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM--SENGKSPNVVTFTS 630

Query: 362 MINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
           +ING+C+ ++++ A  +   MK   L  +   Y  LIDG CK  + + A+ L + +   G
Sbjct: 631 LINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG 690

Query: 422 FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQAL 481
             PN+  YN+++ G    G++  A  + K   ++G+  D  TY  +I    K  +I  A 
Sbjct: 691 LMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLAS 750

Query: 482 ALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGY 541
            L+S++   GI PD   +  L+    ++ +  ++    EE  +    P    Y+++I G+
Sbjct: 751 DLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGH 810

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
            REGNL  A +    M + G V D   +  L+SG
Sbjct: 811 HREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844



 Score =  194 bits (492), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 242/498 (48%), Gaps = 36/498 (7%)

Query: 137 GNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLV 196
           G   +  + E    ++ +F + G ++EAV ++ EM   G+  +      ++   C+   +
Sbjct: 302 GKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNEL 361

Query: 197 DYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL-----------SVML--- 242
             A  LF  M   G+ PD   + VMV  +CK   + +A ++            SV++   
Sbjct: 362 GKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTM 421

Query: 243 ----------DRGFLVDNASFTLIISE----------FCEKGFATRALRYFHKFSDMGLK 282
                     +    + N SF   I+           FC++G    A  +       G++
Sbjct: 422 IQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIE 481

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           PN++ + +M+   C+  ++  A  +  EM+ +G +PN +T++ LIDG  K    + A+ +
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA-EMLLGRMKEQGLIPNTNTYTTLIDGH 401
            +  + + N + N + Y  +ING C+  + ++A EML   +KE+    +  +Y ++IDG 
Sbjct: 542 -INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
            K G+ + A +    MS  G SPN+ T+ ++++G CK  R+  A +M  +     L+ D 
Sbjct: 601 VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL 660

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
             Y  LI   CK+ D+K A  LFS++ + G+ P++  Y +LI+ F    +M  +   +++
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720

Query: 522 AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
            V  G      TYT+MI G  ++GN+ +A   +  + D G VPD I +  L++GL K+ +
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780

Query: 582 LDEARGLYDSMIEKGLIP 599
             +A  + + M +K + P
Sbjct: 781 FLKASKMLEEMKKKDVTP 798



 Score =  160 bits (405), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/579 (22%), Positives = 242/579 (41%), Gaps = 79/579 (13%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS------------ 207
           R+  AV+    M ++ +VP    +N V+       L+D A+ ++ +M             
Sbjct: 184 RMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQ 243

Query: 208 -----------------------ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDR 244
                                  +RG  PD   + + V A CK  +++ A   L  M  +
Sbjct: 244 LLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGK 303

Query: 245 -GFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ 303
            G      ++T +I  F ++G    A+R   +    G+  ++I  TS++ G CK   + +
Sbjct: 304 LGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGK 363

Query: 304 AFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMI 363
           A ++   M  +G  P+    + +++  CK    EKA   ++++        +VL +T MI
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHT-MI 422

Query: 364 NG----------------------------------YCRDDKLNRAEMLLGRMKEQGLIP 389
            G                                  +C+  K++ A   L  M+++G+ P
Sbjct: 423 QGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEP 482

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           N   Y  ++  HC+  N + A  + + M  +G  PN  TY+ ++DG  K    Q A+ ++
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG-IQPDIHSYTTLIAVFCR 508
                +  EA++V YN +I+  CK     +A  +   + K         SY ++I  F +
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVK 602

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
                 +   + E    G  P   T+TS+I G+C+   + +A++  H M       D  A
Sbjct: 603 VGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA 662

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAM-----VI 623
           YG LI G CK++ +  A  L+  + E GL+P      +L   +  +    +A+     ++
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722

Query: 624 LDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDM 662
            D +   L+  T TT++  L  +  + +A+  + +LLD+
Sbjct: 723 NDGISCDLF--TYTTMIDGLLKDGNINLASDLYSELLDL 759



 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 147/299 (49%), Gaps = 3/299 (1%)

Query: 143 KAHEVM-QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNT-QTLNLVMKIACEMGLVDYAQ 200
           +A+EV+   ++    ++G+  +A EM+  +  +     +  + N ++    ++G  D A 
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV 610

Query: 201 YLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEF 260
             + EMS  G  P+  ++  ++  +CK   +  A +    M      +D  ++  +I  F
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670

Query: 261 CEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNV 320
           C+K     A   F +  ++GL PN+  + S+I G    G +  A ++ ++MV  G   ++
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDL 730

Query: 321 YTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG 380
           +T+T +IDGL K G    A  L+ +L+      P+ + +  ++NG  +  +  +A  +L 
Sbjct: 731 FTYTTMIDGLLKDGNINLASDLYSELL-DLGIVPDEILHMVLVNGLSKKGQFLKASKMLE 789

Query: 381 RMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
            MK++ + PN   Y+T+I GH + GN   AF L + M  +G   +   +N +V G  +K
Sbjct: 790 EMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848



 Score =  106 bits (264), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 135/303 (44%), Gaps = 7/303 (2%)

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           +  ++N Y R+ +++ A    G M ++ ++P       ++    ++   + A ++ N M 
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
             G + +  T   ++    ++ + +EA K+ +     G E D + +++ +   CK  D+ 
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291

Query: 479 QALALFSKM-AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
            AL L  +M  K G+     +YT++I  F +E  M E+    +E V FG   +    TS+
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
           + GYC+   L  A+  F+RM + G  PD + +  ++   CK  ++++A   Y  M    +
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411

Query: 598 IPCEVTRITLAYEYCKIDDCCSAMVIL-DRLEKKLWIRTA---TTLVRKLCSERKVGMAA 653
            P  V   T+     K +   +A+ I  D  E   WI        +    C + KV  A 
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFES--WIAHGFMCNKIFLLFCKQGKVDAAT 469

Query: 654 LFF 656
            F 
Sbjct: 470 SFL 472



 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/224 (19%), Positives = 90/224 (40%), Gaps = 4/224 (1%)

Query: 456 GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES 515
           G E     +N L++ + +   +  A+  F  M    + P +     +++   R   + E+
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223

Query: 516 EMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
           +  + + V  G      T   ++    RE     A+K F R+   G  PD + +   +  
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283

Query: 576 LCKQSKLDEARGLYDSMIEKGLIPC-EVTRITLAYEYCKIDDCCSAMVILDRLEK---KL 631
            CK   L  A  L   M  K  +P  + T  ++   + K  +   A+ ++D +      +
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343

Query: 632 WIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
            +  AT+LV   C   ++G A   F+++ +     ++V  +  +
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387


>AT5G16640.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:5461031-5462545 FORWARD
           LENGTH=504
          Length = 504

 Score =  206 bits (523), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 222/451 (49%), Gaps = 1/451 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+R+     +L +++++ F M     +P+    + ++    +M   D   YL+E+M   G
Sbjct: 52  MLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +  +  +  +++  +C+   +  A  +L  M+  G      +F  +++ FC       AL
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F +   MG KPN++ + ++I+GLCK   +  A ++L  M   G  P+V T+ +LI GL
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C  G    A R+   + + E   P+V T+ A+I+   ++ +++ AE     M  + L P+
Sbjct: 232 CSSGRWSDATRMVSCMTKREI-YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY+ LI G C     + A ++   M  +G  P++ TY+ +++G CK  +V+   K+  
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    G+  + VTY ILI  +C+   +  A  +F +M   G+ P+I +Y  L+   C   
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           ++ ++ +   +  + G      TY  +I G C+ G +  A   +  ++  G +PD   Y 
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCE 601
           T++ GL K+    EA  L+  M E G++P E
Sbjct: 471 TMMLGLYKKGLRREADALFRKMKEDGILPNE 501



 Score =  205 bits (522), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 199/393 (50%), Gaps = 3/393 (0%)

Query: 141 LQKAHEVMQC--MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           L   H +  C  ++  F    +L  A+  + +M   G  P+  T   ++   C    V  
Sbjct: 110 LGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYD 169

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
           A Y+F++M   G  P+   Y  ++   CK   V  A   L+ M   G   D  ++  +IS
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
             C  G  + A R     +   + P++  F ++I+   K G + +A E  EEM+ +   P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
           ++ T++ LI GLC     ++A  +F  +V S+   P+V+TY+ +INGYC+  K+     L
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMV-SKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
              M ++G++ NT TYT LI G+C+AG    A ++   M   G  PNI TYN ++ GLC 
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
            G++++A  +L D   NG++AD VTYNI+I   CK  ++  A  ++  +   G+ PDI +
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTK 531
           YTT++    ++    E++  F +    G +P +
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501



 Score =  189 bits (481), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 187/373 (50%), Gaps = 4/373 (1%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P++ +F+ ++  + K         + E+M   G   N+ T   L++  C+      A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
             K+++   ++P+++T+ +++NG+CR D++  A  +  +M   G  PN   Y T+IDG C
Sbjct: 139 LGKMIKL-GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           K+   + A DL+N M ++G  P++ TYN+++ GLC  GR  +A +M+       +  D  
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           T+N LI    K+  + +A   + +M +  + PDI +Y+ LI   C   R+ E+E  F   
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
           V  G  P   TY+ +I GYC+   +   +K F  MS  G V +++ Y  LI G C+  KL
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW---IRTATTL 639
           + A  ++  M+  G+ P  +T   L +  C       A+VIL  ++K      I T   +
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437

Query: 640 VRKLCSERKVGMA 652
           +R +C   +V  A
Sbjct: 438 IRGMCKAGEVADA 450



 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 137/277 (49%), Gaps = 1/277 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++      GR  +A  MV  M  + + P+  T N ++    + G V  A+  +EEM  R 
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD  +Y +++   C    + EA++    M+ +G   D  +++++I+ +C+       +
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + F + S  G+  N + +T +I+G C+ G +  A E+   MV  G  PN+ T+  L+ GL
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C  G  EKA  + L  ++      +++TY  +I G C+  ++  A  +   +  QGL+P+
Sbjct: 407 CDNGKIEKAL-VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC 427
             TYTT++ G  K G    A  L   M  +G  PN C
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502



 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 147/363 (40%), Gaps = 38/363 (10%)

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y  M+    R  KL+ +  L   M +   +P+   ++ L+    K   ++    L   M 
Sbjct: 49  YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
             G   N+CT N +++  C+  ++  A   L      G E   VT+  L++  C+   + 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
            AL +F +M   G +P++  Y T+I   C+ K++  +        + G  P   TY S+I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228

Query: 539 CGYC-----------------------------------REGNLTMAIKFFHRMSDHGCV 563
            G C                                   +EG ++ A +F+  M      
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVI 623
           PD + Y  LI GLC  S+LDEA  ++  M+ KG  P  VT   L   YCK       M +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 624 LDRLEKKLWIR---TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYE 680
              + ++  +R   T T L++  C   K+ +A   F +++    H N +T    +    +
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408

Query: 681 SNK 683
           + K
Sbjct: 409 NGK 411


>AT2G19280.2 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:8362672-8364753 FORWARD
           LENGTH=693
          Length = 693

 Score =  205 bits (521), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 249/512 (48%), Gaps = 8/512 (1%)

Query: 107 VALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQ-KAHEVMQCMVRS-FAEIGRLKEA 164
           + L FF W+  +    H  R  I     ++ +GN+  +A +++ C+V+    E   L   
Sbjct: 128 IVLYFFRWSELWIGVEHSSR-SISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLV 186

Query: 165 VEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVA 224
           ++ +FE      V  T   ++++        V+ A  L  ++   G+ P       ++  
Sbjct: 187 MKDLFETRIDRRVLET-VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKE 245

Query: 225 YCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPN 284
             ++  +  A +++  ML RG  ++ A  +L I ++C  G+  +           G++P+
Sbjct: 246 ILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPD 305

Query: 285 LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 344
           ++ FT  I+ LCK G +K+A  +L ++   G   +  + +++IDG CK G  E+A    +
Sbjct: 306 IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA----I 361

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
           KL+ S   +PN+  Y++ ++  C    + RA  +   + E GL+P+   YTT+IDG+C  
Sbjct: 362 KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL 421

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G  ++AF     + + G  P++ T   ++    + G + +A  + ++    GL+ D VTY
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           N L+  + K   + +   L  +M  +GI PD+ +Y  LI        + E+     E +R
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
            GF+P+   +T +I G+ + G+   A   +  M+D    PD +    L+ G CK  ++++
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601

Query: 585 ARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD 616
           A  L++ +++ GL P  V   TL + YC + D
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633



 Score =  195 bits (496), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 211/426 (49%), Gaps = 4/426 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +++    +  L+ A E V  M ++G   N   L+L ++  C  G  D    L   M   G
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD  ++ V +   CK G + EA   L  +   G   D+ S + +I  FC+ G    A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           +  H F    L+PN+  ++S +  +C  G + +A  + +E+   G  P+   +T +IDG 
Sbjct: 362 KLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C  G T+KAF+ F  L++S  N P++ T T +I    R   ++ AE +   MK +GL  +
Sbjct: 419 CNLGRTDKAFQYFGALLKS-GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY  L+ G+ K     + F+L++ M   G SP++ TYN ++  +  +G + EA +++ 
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    G     + +  +I    K+ D ++A  L+  MA   ++PD+ + + L+  +C+ +
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           RM ++ + F + +  G  P    Y ++I GYC  G++  A +    M   G +P+   + 
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657

Query: 571 TLISGL 576
            L+ GL
Sbjct: 658 ALVLGL 663



 Score =  177 bits (449), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 215/444 (48%), Gaps = 4/444 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           ++  A+++ +++   G+ P+      ++K    +  ++ A+   E M +RG H ++A   
Sbjct: 216 KVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLS 275

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           + +  YC  G   +  + L  M   G   D  +FT+ I + C+ GF   A     K    
Sbjct: 276 LFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+  + ++ +S+I+G CK G  ++A +++        +PN++ +++ +  +C  G   +A
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRA 392

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             +F ++       P+ + YT MI+GYC   + ++A    G + + G  P+  T T LI 
Sbjct: 393 STIFQEIFEL-GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
              + G+   A  +   M  EG   ++ TYN ++ G  K  ++ + ++++ +    G+  
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D  TYNILI     +  I +A  + S++ + G  P   ++T +I  F +     E+ + +
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
                    P   T ++++ GYC+   +  AI  F+++ D G  PD + Y TLI G C  
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV 631

Query: 580 SKLDEARGLYDSMIEKGLIPCEVT 603
             +++A  L   M+++G++P E T
Sbjct: 632 GDIEKACELIGLMVQRGMLPNEST 655



 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 179/396 (45%), Gaps = 7/396 (1%)

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           AL+  +K    G+ P+     S+++ + +   ++ A E +E M+ +G   N    +  I 
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
             C  G+ +K + L + + +    +P+++ +T  I+  C+   L  A  +L ++K  G+ 
Sbjct: 280 KYCSDGYFDKGWELLMGM-KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGIS 338

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
            ++ + +++IDG CK G  E A  L++        PNI  Y++ +  +C  G +  A  +
Sbjct: 339 QDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTI 395

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
            ++ F  GL  D V Y  +I  +C      +A   F  + KSG  P + + T LI    R
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR 455

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
              +S++E  F      G      TY +++ GY +   L    +    M   G  PD   
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVAT 515

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVI---LD 625
           Y  LI  +  +  +DEA  +   +I +G +P  +    +   + K  D   A ++   + 
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575

Query: 626 RLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLD 661
            L  K  + T + L+   C  +++  A + F+KLLD
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD 611


>AT2G19280.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:8362672-8364753 FORWARD
           LENGTH=693
          Length = 693

 Score =  205 bits (521), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 249/512 (48%), Gaps = 8/512 (1%)

Query: 107 VALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQ-KAHEVMQCMVRS-FAEIGRLKEA 164
           + L FF W+  +    H  R  I     ++ +GN+  +A +++ C+V+    E   L   
Sbjct: 128 IVLYFFRWSELWIGVEHSSR-SISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLV 186

Query: 165 VEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVA 224
           ++ +FE      V  T   ++++        V+ A  L  ++   G+ P       ++  
Sbjct: 187 MKDLFETRIDRRVLET-VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKE 245

Query: 225 YCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPN 284
             ++  +  A +++  ML RG  ++ A  +L I ++C  G+  +           G++P+
Sbjct: 246 ILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPD 305

Query: 285 LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 344
           ++ FT  I+ LCK G +K+A  +L ++   G   +  + +++IDG CK G  E+A    +
Sbjct: 306 IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA----I 361

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
           KL+ S   +PN+  Y++ ++  C    + RA  +   + E GL+P+   YTT+IDG+C  
Sbjct: 362 KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL 421

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G  ++AF     + + G  P++ T   ++    + G + +A  + ++    GL+ D VTY
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           N L+  + K   + +   L  +M  +GI PD+ +Y  LI        + E+     E +R
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
            GF+P+   +T +I G+ + G+   A   +  M+D    PD +    L+ G CK  ++++
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601

Query: 585 ARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD 616
           A  L++ +++ GL P  V   TL + YC + D
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633



 Score =  195 bits (496), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 211/426 (49%), Gaps = 4/426 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +++    +  L+ A E V  M ++G   N   L+L ++  C  G  D    L   M   G
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD  ++ V +   CK G + EA   L  +   G   D+ S + +I  FC+ G    A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           +  H F    L+PN+  ++S +  +C  G + +A  + +E+   G  P+   +T +IDG 
Sbjct: 362 KLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C  G T+KAF+ F  L++S  N P++ T T +I    R   ++ AE +   MK +GL  +
Sbjct: 419 CNLGRTDKAFQYFGALLKS-GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY  L+ G+ K     + F+L++ M   G SP++ TYN ++  +  +G + EA +++ 
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    G     + +  +I    K+ D ++A  L+  MA   ++PD+ + + L+  +C+ +
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           RM ++ + F + +  G  P    Y ++I GYC  G++  A +    M   G +P+   + 
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657

Query: 571 TLISGL 576
            L+ GL
Sbjct: 658 ALVLGL 663



 Score =  177 bits (449), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 215/444 (48%), Gaps = 4/444 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           ++  A+++ +++   G+ P+      ++K    +  ++ A+   E M +RG H ++A   
Sbjct: 216 KVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLS 275

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           + +  YC  G   +  + L  M   G   D  +FT+ I + C+ GF   A     K    
Sbjct: 276 LFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+  + ++ +S+I+G CK G  ++A +++        +PN++ +++ +  +C  G   +A
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRA 392

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             +F ++       P+ + YT MI+GYC   + ++A    G + + G  P+  T T LI 
Sbjct: 393 STIFQEIFEL-GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
              + G+   A  +   M  EG   ++ TYN ++ G  K  ++ + ++++ +    G+  
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D  TYNILI     +  I +A  + S++ + G  P   ++T +I  F +     E+ + +
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
                    P   T ++++ GYC+   +  AI  F+++ D G  PD + Y TLI G C  
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV 631

Query: 580 SKLDEARGLYDSMIEKGLIPCEVT 603
             +++A  L   M+++G++P E T
Sbjct: 632 GDIEKACELIGLMVQRGMLPNEST 655



 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 179/396 (45%), Gaps = 7/396 (1%)

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           AL+  +K    G+ P+     S+++ + +   ++ A E +E M+ +G   N    +  I 
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
             C  G+ +K + L + + +    +P+++ +T  I+  C+   L  A  +L ++K  G+ 
Sbjct: 280 KYCSDGYFDKGWELLMGM-KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGIS 338

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
            ++ + +++IDG CK G  E A  L++        PNI  Y++ +  +C  G +  A  +
Sbjct: 339 QDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTI 395

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
            ++ F  GL  D V Y  +I  +C      +A   F  + KSG  P + + T LI    R
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR 455

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
              +S++E  F      G      TY +++ GY +   L    +    M   G  PD   
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVAT 515

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVI---LD 625
           Y  LI  +  +  +DEA  +   +I +G +P  +    +   + K  D   A ++   + 
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575

Query: 626 RLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLD 661
            L  K  + T + L+   C  +++  A + F+KLLD
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD 611


>AT1G62914.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr1:23301576-23303162 FORWARD LENGTH=528
          Length = 528

 Score =  204 bits (520), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 226/464 (48%), Gaps = 4/464 (0%)

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           +D A  LF  M+     P    +  ++ A  KM        +   M   G   +  ++ +
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           +I+ FC     + AL    K   +G +P+++   S++ G C    I  A  ++++MV  G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
           +KP+  T T LI GL       +A  L  ++V+    +P+++TY A++NG C+    + A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ-RGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
             LL +M+   +  N   Y+T+ID  CK  + + A +L   M  +G  PN+ TY++++  
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
           LC  GR  +A ++L D     +  + VT++ LI    K+  + +A  L+ +M K  I P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
           I +Y++LI  FC   R+ E++   E  +R   +P   TY ++I G+C+   +   ++ F 
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKID 615
            MS  G V +++ Y TLI G  +    D A+ ++  M+  G+ P  +T   L    CK  
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477

Query: 616 DCCSAMVILDRLEKKLW---IRTATTLVRKLCSERKVGMAALFF 656
               AMV+ + L++      I T   ++  +C   K  M  ++F
Sbjct: 478 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521



 Score =  202 bits (513), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 212/431 (49%), Gaps = 1/431 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ + A++ +    +    +M   G+  N  T N+++   C    +  A  L  +M   G
Sbjct: 84  LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD  +   ++  +C    + +A   +  M++ G+  D  +FT +I        A+ A+
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +    G +P+L+ + +++ GLCKRG    A  +L +M     + NV  ++ +ID L
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK    + A  LF ++  ++  +PNV+TY+++I+  C   + + A  LL  M E+ + PN
Sbjct: 264 CKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             T++ LID   K G   +A  L   M +    PNI TY+++++G C   R+ EA +ML+
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                    + VTYN LI+  CK   + + + LF +M++ G+  +  +YTTLI  F + +
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
               ++M F++ V  G  P   TY  ++ G C+ G L  A+  F  +      PD   Y 
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502

Query: 571 TLISGLCKQSK 581
            +I G+CK  K
Sbjct: 503 IMIEGMCKAGK 513



 Score =  194 bits (492), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 193/385 (50%), Gaps = 1/385 (0%)

Query: 170 EMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMG 229
           +M   G  P+  TLN ++   C    +  A  L ++M   G  PD+ ++  ++       
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197

Query: 230 NVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFT 289
              EA   +  M+ RG   D  ++  +++  C++G    AL   +K     ++ N++ ++
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257

Query: 290 SMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
           ++I+ LCK      A  +  EM  +G +PNV T+++LI  LC  G    A RL   ++  
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
           + N PN++T++A+I+ + +  KL +AE L   M ++ + PN  TY++LI+G C       
Sbjct: 318 KIN-PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376

Query: 410 AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILIS 469
           A  ++ LM R+   PN+ TYN +++G CK  RV +  ++ ++    GL  + VTY  LI 
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436

Query: 470 EHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
              +  D   A  +F +M   G+ P+I +Y  L+   C+  +++++ + FE   R    P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496

Query: 530 TKRTYTSMICGYCREGNLTMAIKFF 554
              TY  MI G C+ G   M   +F
Sbjct: 497 DIYTYNIMIEGMCKAGKWKMGGIYF 521



 Score =  181 bits (458), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 199/406 (49%), Gaps = 4/406 (0%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P++I F+ ++  + K           E+M   G   N+YT+  LI+  C+      A  L
Sbjct: 76  PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
             K+++    +P+++T  +++NG+C  ++++ A  L+ +M E G  P+T T+TTLI G  
Sbjct: 136 LGKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
                  A  L++ M + G  P++ TY A+V+GLCK+G    A  +L       +EA+ V
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
            Y+ +I   CK      AL LF++M   G++P++ +Y++LI+  C   R S++     + 
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
           +     P   T++++I  + ++G L  A K +  M      P+   Y +LI+G C   +L
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR---TATTL 639
            EA+ + + MI K  +P  VT  TL   +CK       M +   + ++  +    T TTL
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYA 685
           +      R    A + F +++ +  H N +T    +    ++ K A
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 480



 Score =  179 bits (455), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 204/410 (49%), Gaps = 4/410 (0%)

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           F+ ++S   +       + +  K   +G+  NL  +  +I   C+   +  A  +L +M+
Sbjct: 81  FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
             G++P++ T  +L++G C       A  L  ++V     KP+ +T+T +I+G    +K 
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM-GYKPDTVTFTTLIHGLFLHNKA 199

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
           + A  L+ RM ++G  P+  TY  +++G CK G+ + A +L+N M       N+  Y+ +
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
           +D LCK     +A  +  +  + G+  + +TY+ LIS  C       A  L S M +  I
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319

Query: 493 QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIK 552
            P++ +++ LI  F ++ ++ ++E  +EE ++    P   TY+S+I G+C    L  A +
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379

Query: 553 FFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYC 612
               M    C+P+ + Y TLI+G CK  ++D+   L+  M ++GL+   VT  TL + + 
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439

Query: 613 KIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKL 659
           +  DC +A ++  ++        I T   L+  LC   K+  A + F  L
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489



 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 141/316 (44%), Gaps = 11/316 (3%)

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
           D +L+ A  L G M +    P+   ++ L+    K   F+        M   G S N+ T
Sbjct: 56  DIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115

Query: 429 YNAIVDGLCK----KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALF 484
           YN +++  C+       +    KM+K G+    E D VT N L++  C    I  A+AL 
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGY----EPDIVTLNSLLNGFCHGNRISDAVALV 171

Query: 485 SKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCRE 544
            +M + G +PD  ++TTLI       + SE+    +  V+ G  P   TY +++ G C+ 
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231

Query: 545 GNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTR 604
           G+  +A+   ++M       + + Y T+I  LCK    D+A  L+  M  KG+ P  +T 
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291

Query: 605 ITLAYEYCKIDDCCSAMVIL-DRLEKKL--WIRTATTLVRKLCSERKVGMAALFFHKLLD 661
            +L    C       A  +L D +E+K+   + T + L+     + K+  A   + +++ 
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351

Query: 662 MDFHVNRVTLAAFMTA 677
                N  T ++ +  
Sbjct: 352 RSIDPNIFTYSSLING 367



 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 133/293 (45%), Gaps = 3/293 (1%)

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
            + A  L  +M++    P+I  ++ ++  + K  +        +     G+  +  TYNI
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           LI+  C+ + +  ALAL  KM K G +PDI +  +L+  FC   R+S++    ++ V  G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
           + P   T+T++I G       + A+    RM   GC PD + YG +++GLCK+   D A 
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 587 GLYDSMIEKGLIPCEVTRITLAYEYCKI---DDCCSAMVILDRLEKKLWIRTATTLVRKL 643
            L + M    +    V   T+    CK    DD  +    ++    +  + T ++L+  L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 644 CSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSARIYK 696
           C+  +   A+     +++   + N VT +A + A  +  K      L   + K
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351


>AT5G12100.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr5:3911388-3913838 FORWARD LENGTH=816
          Length = 816

 Score =  203 bits (517), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 239/483 (49%), Gaps = 5/483 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +++   + G +++A  ++ EM + G VP+  T +++          + A  ++E     G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V  ++ +  +++ A CK G + +A++ L   + +G + +   +  +I  +C KG    A 
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
                    G+KP+ + +  +I   C+ G ++ A + + +M  +G  P+V T+  LI G 
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            +K   +K F + LK +      PNV++Y  +IN  C+  KL  A+++   M+++G+ P 
Sbjct: 470 GRKYEFDKCFDI-LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
              Y  LIDG C  G  E AF     M ++G   N+ TYN ++DGL   G++ EA  +L 
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    GL+ D  TYN LIS +    ++++ +AL+ +M +SGI+P + +Y  LI++ C ++
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-CTKE 647

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
            +  +E  F E       P    Y  ++  Y   G++  A     +M +     D   Y 
Sbjct: 648 GIELTERLFGE---MSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           +LI G  K  KL E R L D M  + + P   T   +   +C++ D  SA V    +++K
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764

Query: 631 LWI 633
            ++
Sbjct: 765 GFL 767



 Score =  202 bits (515), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 245/537 (45%), Gaps = 40/537 (7%)

Query: 161 LKEAVEMVFEMHNQGMVPNTQTLNLVM--------------------------------- 187
           + EA ++ F + N+G+ P++ +L L++                                 
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 188 --KIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRG 245
             + A ++  V     LF  M    ++P    Y V++   CK   + +A++    ML R 
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 246 FLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAF 305
            L    ++  +I  +C+ G   ++ +   +     ++P+LI F ++++GL K G ++ A 
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 306 EMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMING 365
            +L+EM   G+ P+ +T + L DG       E A  ++   V S   K N  T + ++N 
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS-GVKMNAYTCSILLNA 363

Query: 366 YCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPN 425
            C++ K+ +AE +LGR   +GL+PN   Y T+IDG+C+ G+   A   +  M ++G  P+
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD 423

Query: 426 ICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFS 485
              YN ++   C+ G ++ A K +      G+     TYNILI  + ++ +  +   +  
Sbjct: 424 HLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK 483

Query: 486 KMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREG 545
           +M  +G  P++ SY TLI   C+  ++ E+++   +    G  P  R Y  +I G C +G
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543

Query: 546 NLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRI 605
            +  A +F   M   G   + + Y TLI GL    KL EA  L   +  KGL P   T  
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603

Query: 606 TLAYEY---CKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKL 659
           +L   Y     +  C +    + R   K  ++T   L+  LC++  + +    F ++
Sbjct: 604 SLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM 659



 Score =  201 bits (510), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 213/433 (49%), Gaps = 2/433 (0%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R+ +A ++  EM  + ++P+  T N ++   C+ G  + +  + E M A  + P   ++ 
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            ++    K G V +A+  L  M D GF+ D  +F+++   +     A  AL  +    D 
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+K N    + ++  LCK G I++A E+L   + +G  PN   +  +IDG C+KG    A
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            R+ ++ +  +  KP+ L Y  +I  +C   ++  AE  + +MK +G+ P+  TY  LI 
Sbjct: 409 -RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G+ +   F++ FD++  M   G  PN+ +Y  +++ LCK  ++ EA  + +D    G+  
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
               YN+LI   C +  I+ A     +M K GI+ ++ +Y TLI       ++SE+E   
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            E  R G  P   TY S+I GY   GN+   I  +  M   G  P    Y  LIS LC +
Sbjct: 588 LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTK 646

Query: 580 SKLDEARGLYDSM 592
             ++    L+  M
Sbjct: 647 EGIELTERLFGEM 659



 Score =  171 bits (432), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 215/442 (48%), Gaps = 5/442 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ +  + G++++A E++     +G+VPN    N ++   C  G +  A+   E M  +G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD  +Y  ++  +C++G +  A+K ++ M  +G      ++ ++I  +  K    +  
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +  D G  PN++++ ++I  LCK   + +A  +  +M  +G  P V  +  LIDG 
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C KG  E AFR F K +  +  + N++TY  +I+G     KL+ AE LL  +  +GL P+
Sbjct: 540 CSKGKIEDAFR-FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY +LI G+  AGN +R   L   M R G  P + TY+ ++  LC K  ++   ++  
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFG 657

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +     L+ D + YN ++  +    D+++A  L  +M +  I  D  +Y +LI    +  
Sbjct: 658 E---MSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           ++ E     +E       P   TY  ++ G+C   +   A  ++  M + G + D     
Sbjct: 715 KLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGN 774

Query: 571 TLISGLCKQSKLDEARGLYDSM 592
            L+SGL ++ +  EA  +   M
Sbjct: 775 ELVSGLKEEWRSKEAEIVISEM 796



 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 211/483 (43%), Gaps = 39/483 (8%)

Query: 252 SFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM 311
           S+ L+     E    + A   F    + G+ P+  + T +++ L K    +    +   +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170

Query: 312 VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK 371
           +   ++P+ + +   I    K     K   LF ++ + +   P+V  Y  +I+G C+  +
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM-KHDRIYPSVFIYNVLIDGLCKGKR 229

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
           +N AE L   M  + L+P+  TY TLIDG+CKAGN E++F +   M  +   P++ T+N 
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289

Query: 432 IVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           ++ GL K G V++A  +LK+    G   D  T++IL   +      + AL ++     SG
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
           ++ + ++ + L+   C+E ++ ++E      +  G +P +  Y +MI GYCR+G+L  A 
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409

Query: 552 KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP-CEVTRITLA-- 608
                M   G  PD +AY  LI   C+  +++ A    + M  KG+ P  E   I +   
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469

Query: 609 ---YEY-----------------------------CKIDDCCSAMVILDRLEKK---LWI 633
              YE+                             CK      A ++   +E +     +
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529

Query: 634 RTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSAR 693
           R    L+   CS+ K+  A  F  ++L     +N VT    +     + K +   DL   
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589

Query: 694 IYK 696
           I +
Sbjct: 590 ISR 592



 Score =  166 bits (419), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 199/444 (44%), Gaps = 42/444 (9%)

Query: 217 SYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKF 276
           SY ++ V   +   + EA      + + G    + S TL++    +       +  F   
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170

Query: 277 SDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWT 336
            +   +P+   +   I+   K   + +  E+   M      P+V+ +  LIDGLCK    
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT 396
             A +LF +++ +    P+++TY  +I+GYC+     ++  +  RMK   + P+  T+ T
Sbjct: 231 NDAEQLFDEML-ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG--------------------- 435
           L+ G  KAG  E A +++  M   GF P+  T++ + DG                     
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349

Query: 436 --------------LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQAL 481
                         LCK+G++++A ++L      GL  ++V YN +I  +C++ D+  A 
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409

Query: 482 ALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGY 541
                M K G++PD  +Y  LI  FC    M  +E    +    G  P+  TY  +I GY
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCE 601
            R+            M D+G +P+ ++YGTLI+ LCK SKL EA+ +   M ++G+ P  
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP-- 527

Query: 602 VTRITLAYEYCKIDDCCSAMVILD 625
             RI   Y    ID CCS   I D
Sbjct: 528 KVRI---YNML-IDGCCSKGKIED 547



 Score =  155 bits (393), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 187/383 (48%), Gaps = 9/383 (2%)

Query: 141 LQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQ 200
           ++  H    C++R F E+G ++ A + V +M  +G+ P+ +T N+++         D   
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479

Query: 201 YLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEF 260
            + +EM   G  P+  SY  ++   CK   +LEA      M DRG       + ++I   
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539

Query: 261 CEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNV 320
           C KG    A R+  +    G++ NL+ + ++I+GL   G + +A ++L E+  +G KP+V
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599

Query: 321 YTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG 380
           +T+ +LI G    G  ++   L+ ++ RS   KP + TY  +I+  C  + +   E L G
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRS-GIKPTLKTYHLLIS-LCTKEGIELTERLFG 657

Query: 381 RMKEQGLIPNTNTYTTLIDGHCKA--GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
            M    L P+   Y  ++  HC A  G+ E+AF+L   M  +    +  TYN+++ G  K
Sbjct: 658 EM---SLKPDLLVYNGVL--HCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 712

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
            G++ E   ++ +     +E +  TYNI++  HC+  D   A   + +M + G   D+  
Sbjct: 713 VGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCI 772

Query: 499 YTTLIAVFCREKRMSESEMFFEE 521
              L++    E R  E+E+   E
Sbjct: 773 GNELVSGLKEEWRSKEAEIVISE 795


>AT2G06000.2 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:2328000-2329610 REVERSE
           LENGTH=536
          Length = 536

 Score =  201 bits (512), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 216/437 (49%), Gaps = 11/437 (2%)

Query: 182 TLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVM 241
           T NL+ +  C+ GL D A  +FE M + GV P++     +V ++ + G +     + + +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL----HFATAL 160

Query: 242 LDRGFLVDNASFTL--IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRG 299
           L + F V+     +  +++   +      A++ F +        +   F  +I GLC  G
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220

Query: 300 SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
             ++A E+L  M   G +P++ T+  LI G CK     KA  +F  +       P+V+TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
           T+MI+GYC+  K+  A  LL  M   G+ P   T+  L+DG+ KAG    A ++   M  
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
            G  P++ T+ +++DG C+ G+V + +++ ++    G+  +  TY+ILI+  C +  + +
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400

Query: 480 ALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMIC 539
           A  L  ++A   I P    Y  +I  FC+  +++E+ +  EE  +    P K T+T +I 
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460

Query: 540 GYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG--- 596
           G+C +G +  A+  FH+M   GC PD I   +L+S L K     EA  L + +  KG   
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSN 519

Query: 597 -LIPCEVTRITLAYEYC 612
            ++P E          C
Sbjct: 520 NVVPLETKTANATLAAC 536



 Score =  166 bits (419), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 193/410 (47%), Gaps = 9/410 (2%)

Query: 273 FHKFS--DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           F +FS   + ++ +   +  +   LCK G    A +M E M   G  PN      L+   
Sbjct: 89  FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            +KG    A  L L+    E      +   +++N   + D++  A  L           +
Sbjct: 149 AEKGKLHFATALLLQSFEVEG---CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND 205

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
           T T+  LI G C  G  E+A +L+ +MS  G  P+I TYN ++ G CK   + +A +M K
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265

Query: 451 DGFHNGL-EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
           D     +   D VTY  +IS +CK   +++A +L   M + GI P   ++  L+  + + 
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
             M  +E    + + FG  P   T+TS+I GYCR G ++   + +  M+  G  P++  Y
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
             LI+ LC +++L +AR L   +  K +IP       +   +CK      A VI++ +EK
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445

Query: 630 KLWIR---TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMT 676
           K       T T L+   C + ++  A   FHK++ +    +++T+++ ++
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495



 Score =  155 bits (392), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 179/359 (49%), Gaps = 3/359 (0%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V+  ++ +  ++ R+++A+++  E        +T+T N++++  C +G  + A  L   M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLV-DNASFTLIISEFCEKGF 265
           S  G  PD  +Y  ++  +CK   + +A +    +        D  ++T +IS +C+ G 
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
              A         +G+ P  + F  +++G  K G +  A E+  +M+  G  P+V T T+
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LIDG C+ G   + FRL+ ++  +    PN  TY+ +IN  C +++L +A  LLG++  +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEM-NARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
            +IP    Y  +IDG CKAG    A  ++  M ++   P+  T+  ++ G C KGR+ EA
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
             +       G   DK+T + L+S   K    K+A  L +++A+ G   ++    T  A
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVVPLETKTA 529


>AT2G06000.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:2328000-2329610 REVERSE
           LENGTH=536
          Length = 536

 Score =  201 bits (512), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 216/437 (49%), Gaps = 11/437 (2%)

Query: 182 TLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVM 241
           T NL+ +  C+ GL D A  +FE M + GV P++     +V ++ + G +     + + +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL----HFATAL 160

Query: 242 LDRGFLVDNASFTL--IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRG 299
           L + F V+     +  +++   +      A++ F +        +   F  +I GLC  G
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220

Query: 300 SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
             ++A E+L  M   G +P++ T+  LI G CK     KA  +F  +       P+V+TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
           T+MI+GYC+  K+  A  LL  M   G+ P   T+  L+DG+ KAG    A ++   M  
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
            G  P++ T+ +++DG C+ G+V + +++ ++    G+  +  TY+ILI+  C +  + +
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400

Query: 480 ALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMIC 539
           A  L  ++A   I P    Y  +I  FC+  +++E+ +  EE  +    P K T+T +I 
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460

Query: 540 GYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG--- 596
           G+C +G +  A+  FH+M   GC PD I   +L+S L K     EA  L + +  KG   
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSN 519

Query: 597 -LIPCEVTRITLAYEYC 612
            ++P E          C
Sbjct: 520 NVVPLETKTANATLAAC 536



 Score =  166 bits (419), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 193/410 (47%), Gaps = 9/410 (2%)

Query: 273 FHKFS--DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           F +FS   + ++ +   +  +   LCK G    A +M E M   G  PN      L+   
Sbjct: 89  FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            +KG    A  L L+    E      +   +++N   + D++  A  L           +
Sbjct: 149 AEKGKLHFATALLLQSFEVEG---CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND 205

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
           T T+  LI G C  G  E+A +L+ +MS  G  P+I TYN ++ G CK   + +A +M K
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265

Query: 451 DGFHNGL-EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
           D     +   D VTY  +IS +CK   +++A +L   M + GI P   ++  L+  + + 
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
             M  +E    + + FG  P   T+TS+I GYCR G ++   + +  M+  G  P++  Y
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
             LI+ LC +++L +AR L   +  K +IP       +   +CK      A VI++ +EK
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445

Query: 630 KLWIR---TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMT 676
           K       T T L+   C + ++  A   FHK++ +    +++T+++ ++
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495



 Score =  155 bits (392), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 179/359 (49%), Gaps = 3/359 (0%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V+  ++ +  ++ R+++A+++  E        +T+T N++++  C +G  + A  L   M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLV-DNASFTLIISEFCEKGF 265
           S  G  PD  +Y  ++  +CK   + +A +    +        D  ++T +IS +C+ G 
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
              A         +G+ P  + F  +++G  K G +  A E+  +M+  G  P+V T T+
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LIDG C+ G   + FRL+ ++  +    PN  TY+ +IN  C +++L +A  LLG++  +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEM-NARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
            +IP    Y  +IDG CKAG    A  ++  M ++   P+  T+  ++ G C KGR+ EA
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
             +       G   DK+T + L+S   K    K+A  L +++A+ G   ++    T  A
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVVPLETKTA 529


>AT3G48810.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:18097048-18099027 FORWARD
           LENGTH=659
          Length = 659

 Score =  201 bits (511), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 227/469 (48%), Gaps = 9/469 (1%)

Query: 163 EAVEMVF-EMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVM 221
           + + MV+ +M   G  PN  T N+++K  C+   VD A+ L  EMS +G  PD+ SY  +
Sbjct: 163 QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTV 222

Query: 222 VVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGL 281
           + + C++G V E  +     L   F    + +  +I+  C++     A     +  + G+
Sbjct: 223 ISSMCEVGLVKEGRE-----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGI 277

Query: 282 KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFR 341
            PN+I+++++I  LC  G I+ AF  L +M+ +G  PN+YT ++L+ G   +G T  A  
Sbjct: 278 SPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALD 337

Query: 342 LFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGH 401
           L+ +++R    +PNV+ Y  ++ G+C    + +A  +   M+E G  PN  TY +LI+G 
Sbjct: 338 LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
            K G+ + A  + N M   G  PN+  Y  +V+ LC+  + +EA  +++           
Sbjct: 398 AKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSG-IQPDIHSYTTLIAVFCREKRMSESEMFFE 520
            T+N  I   C    +  A  +F +M +     P+I +Y  L+    +  R+ E+     
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTR 517

Query: 521 EAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQS 580
           E    G   +  TY +++ G C  G   +A++   +M   G  PD I    +I   CKQ 
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG 577

Query: 581 KLDEARGLYD--SMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
           K + A  + D  S   +   P  ++   + +  C+ +     +++L+R+
Sbjct: 578 KAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626



 Score =  192 bits (487), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 212/458 (46%), Gaps = 35/458 (7%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLV-------------- 196
           ++++  +  ++  A +++ EM N+G  P+  +   V+   CE+GLV              
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVV 246

Query: 197 --------------DY--AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSV 240
                         DY  A  L  EM  +G+ P+  SY  ++   C  G +  A  +L+ 
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306

Query: 241 MLDRGFLVDNASFTLIISEFCEKGFATRALRYFHK-FSDMGLKPNLINFTSMIEGLCKRG 299
           ML RG   +  + + ++     +G    AL  +++     GL+PN++ + ++++G C  G
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366

Query: 300 SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
           +I +A  +   M   G  PN+ T+ +LI+G  K+G  + A  ++ K++ S    PNV+ Y
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS-GCCPNVVVY 425

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
           T M+   CR  K   AE L+  M ++   P+  T+   I G C AG  + A  +   M +
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485

Query: 420 EG-FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
           +    PNI TYN ++DGL K  R++EAY + ++ F  G+E    TYN L+   C      
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFE--EAVRFGFIPTKRTYTS 536
            AL L  KM   G  PD  +   +I  +C++ +   +    +     R  + P   +YT+
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTN 605

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
           +I G CR       +    RM   G VP    +  LI+
Sbjct: 606 VIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643



 Score =  180 bits (457), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 192/387 (49%), Gaps = 13/387 (3%)

Query: 217 SYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKF 276
           ++ VM+      G V      L  M  +GF      F  +IS + + G A RA+  F++ 
Sbjct: 78  TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137

Query: 277 SDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWT 336
            + G  P++  +  +++ L     I+  + +  +M   G++PNV+T+  L+  LCK    
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197

Query: 337 EKAFRLFLKLVRSENNK---PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
           + A +L +++    +NK   P+ ++YT +I+  C    +     L  R +     P  + 
Sbjct: 198 DGAKKLLVEM----SNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSV 248

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           Y  LI+G CK  +++ AF+LM  M  +G SPN+ +Y+ +++ LC  G+++ A+  L    
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS-GIQPDIHSYTTLIAVFCREKRM 512
             G   +  T + L+     +     AL L+++M +  G+QP++ +Y TL+  FC    +
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
            ++   F      G  P  RTY S+I G+ + G+L  A+  +++M   GC P+ + Y  +
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLIP 599
           +  LC+ SK  EA  L + M ++   P
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAP 455



 Score =  152 bits (384), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 199/409 (48%), Gaps = 26/409 (6%)

Query: 120 RFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVR--------SFAEI-------GRLKEA 164
           RF   + +Y      L    + + A E+M+ MV         S++ +       G+++ A
Sbjct: 241 RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300

Query: 165 VEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM-SARGVHPDSASYRVMVV 223
              + +M  +G  PN  TL+ ++K     G    A  L+ +M    G+ P+  +Y  +V 
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ 360

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP 283
            +C  GN+++A    S M + G   +  ++  +I+ F ++G    A+  ++K    G  P
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG---WTEKAF 340
           N++ +T+M+E LC+    K+A  ++E M  +   P+V T  A I GLC  G   W EK F
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480

Query: 341 RLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDG 400
           R   ++ +     PN++TY  +++G  + +++  A  L   +  +G+  +++TY TL+ G
Sbjct: 481 R---QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537

Query: 401 HCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG---L 457
            C AG    A  L+  M  +G SP+  T N I+   CK+G+ + A +ML D    G    
Sbjct: 538 SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKW 596

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
             D ++Y  +I   C+    +  + L  +M  +GI P I +++ LI  F
Sbjct: 597 RPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645



 Score =  125 bits (314), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 160/374 (42%), Gaps = 31/374 (8%)

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A   F  +  S   K   LT+  MI     D +++  + LL +MK QG   + + + ++I
Sbjct: 59  ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
             + + G  ERA ++   +   G  P++  YN ++D L  + R+Q  Y + +D   +G E
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            +  TYN+L+   CK   +  A  L  +M+  G  PD  SYTT+I+  C    + E    
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
            E      F P    Y ++I G C+E +   A +    M + G  P+ I+Y TLI+ LC 
Sbjct: 239 AER-----FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293

Query: 579 QSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW------ 632
             +++ A      M+++G  P   T  +L      +  C       D L+  LW      
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSL------VKGCFLRGTTFDALD--LWNQMIRG 345

Query: 633 ------IRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYAL 686
                 +    TLV+  CS   +  A   F  + ++    N  T  + +      N +A 
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI------NGFAK 399

Query: 687 VSDLSARIYKDNRL 700
              L   +Y  N++
Sbjct: 400 RGSLDGAVYIWNKM 413


>AT1G64583.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:23987202-23988740 REVERSE
           LENGTH=512
          Length = 512

 Score =  201 bits (510), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 227/486 (46%), Gaps = 7/486 (1%)

Query: 115 AIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRS-FAEIGRLKEAVEMVFEMHN 173
            I  S  + F R   V   +L+G G   +A    +  +R+ F    R ++A  + FEM +
Sbjct: 8   GIATSTAKGFRR---VVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVH 64

Query: 174 QGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLE 233
              +P+      ++     +   +   Y  ++M   G+  D  S+ +++  +C+   +  
Sbjct: 65  SQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSF 124

Query: 234 ADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIE 293
           A   L  M+  G+     +F  ++  FC       A          G +PN++ + ++I+
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184

Query: 294 GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG-WTEKAFRLFLKLVRSENN 352
           GLCK G +  A E+L EM  +G   +V T+  L+ GLC  G W++ A  L   + RS N 
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN- 243

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
            P+V+T+TA+I+ + +   L+ A+ L   M +  + PN  TY ++I+G C  G    A  
Sbjct: 244 -PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
             +LM+ +G  PN+ TYN ++ G CK   V E  K+ +     G  AD  TYN LI  +C
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           +   ++ AL +F  M    + PDI ++  L+   C    +  + + F++           
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
            Y  MI G C+   +  A + F R+   G  PD+  Y  +I GLCK     EA  L   M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482

Query: 593 IEKGLI 598
            E+G+I
Sbjct: 483 KEEGII 488



 Score =  185 bits (470), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 180/365 (49%), Gaps = 1/365 (0%)

Query: 249 DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           D  SFT++I  FC     + AL    K   +G +P+++ F S++ G C    I  AF ++
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 309 EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR 368
             MV  G++PNV  +  LIDGLCK G    A  L L  +  +    +V+TY  ++ G C 
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL-LNEMEKKGLGADVVTYNTLLTGLCY 223

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
             + + A  +L  M ++ + P+  T+T LID   K GN + A +L   M +    PN  T
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           YN+I++GLC  GR+ +A K        G   + VTYN LIS  CK   + + + LF +M+
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
             G   DI +Y TLI  +C+  ++  +   F   V     P   T+  ++ G C  G + 
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
            A+  F  M +       +AY  +I GLCK  K+++A  L+  +  +G+ P   T   + 
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

Query: 609 YEYCK 613
              CK
Sbjct: 464 LGLCK 468



 Score =  173 bits (439), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 1/313 (0%)

Query: 302 KQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTA 361
           + AF +  EMV     P++   T L+         E     F + +       ++ ++T 
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI-YFSQKMELYGISHDLYSFTI 111

Query: 362 MINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
           +I+ +CR  +L+ A  +LG+M + G  P+  T+ +L+ G C       AF L+ LM + G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 422 FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQAL 481
           + PN+  YN ++DGLCK G +  A ++L +    GL AD VTYN L++  C       A 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 482 ALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGY 541
            +   M K  I PD+ ++T LI VF ++  + E++  ++E ++    P   TY S+I G 
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCE 601
           C  G L  A K F  M+  GC P+ + Y TLISG CK   +DE   L+  M  +G     
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 602 VTRITLAYEYCKI 614
            T  TL + YC++
Sbjct: 352 FTYNTLIHGYCQV 364



 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 115/298 (38%), Gaps = 3/298 (1%)

Query: 365 GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP 424
           G+    +   A  L   M     +P+   +T L+        +E        M   G S 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 425 NICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALF 484
           ++ ++  ++   C+  R+  A  +L      G E   VT+  L+   C    I  A +L 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 485 SKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCRE 544
             M KSG +P++  Y TLI   C+   ++ +     E  + G      TY +++ G C  
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 545 GNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTR 604
           G  + A +    M      PD + +  LI    KQ  LDEA+ LY  MI+  + P  VT 
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 605 ITLAYEYCKIDDCCSAMVILDRLEKK---LWIRTATTLVRKLCSERKVGMAALFFHKL 659
            ++    C       A    D +  K     + T  TL+   C  R V      F ++
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342


>AT5G57250.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:23195609-23198524 REVERSE
           LENGTH=971
          Length = 971

 Score =  200 bits (508), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 206/426 (48%), Gaps = 45/426 (10%)

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRG--FLVDNASFTLIISEFCEKGFAT 267
           G  P S ++  ++  + + G +  A + L +M ++   +  DN   + +IS FC+ G   
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188

Query: 268 RALRYFHKFSDMG-LKPNLINFTSMIEGLCKRGSIKQAFEML------------------ 308
            AL +F    D G L PNL+ +T+++  LC+ G + +  +++                  
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248

Query: 309 -----------------EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSEN 351
                             EMV +G   +V +++ LIDGL K+G  E+A  L  K+++ E 
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIK-EG 307

Query: 352 NKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAF 411
            +PN++TYTA+I G C+  KL  A +L  R+   G+  +   Y TLIDG C+ GN  RAF
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAF 367

Query: 412 DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEH 471
            ++  M + G  P+I TYN +++GLC  GRV EA     D    G+  D +TY+ L+  +
Sbjct: 368 SMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSY 422

Query: 472 CKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTK 531
            K  +I   L +  +  ++ I  D+     L+  F       E++  +         P  
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482

Query: 532 RTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
            TY +MI GYC+ G +  A++ F+ +     V  ++ Y  +I  LCK+  LD A  +   
Sbjct: 483 ATYATMIKGYCKTGQIEEALEMFNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIE 541

Query: 592 MIEKGL 597
           + EKGL
Sbjct: 542 LWEKGL 547



 Score =  155 bits (392), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 144/604 (23%), Positives = 252/604 (41%), Gaps = 116/604 (19%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQG-MVPNTQTLNLVMKIACEMGLVDYAQYLFEE 205
           V   ++  F +IG+ + A+       + G +VPN  T   ++   C++G VD  + L   
Sbjct: 173 VCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR 232

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           +   G   D   Y   +  Y K G +++A      M+++G   D  S++++I    ++G 
Sbjct: 233 LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 292

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
              AL    K    G++PNLI +T++I GLCK G +++AF +   ++  G + + + +  
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LIDG+C+KG   +AF + L  +     +P++LTY  +ING C   +++ A+ +      +
Sbjct: 353 LIDGICRKGNLNRAFSM-LGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SK 406

Query: 386 GLIPNTNTYTTLIDGHCKAGNFE-------------------------RAFDLMN----- 415
           G++ +  TY+TL+D + K  N +                         +AF LM      
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466

Query: 416 -----LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISE 470
                 M     +P+  TY  ++ G CK G+++EA +M  +   + + A  V YN +I  
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDA 525

Query: 471 HCKQADIKQALALFSKMAKSGIQPDIHSYTTLI--------------AVFCREKRMSESE 516
            CK+  +  A  +  ++ + G+  DIH+  TL+               V+  E+  S+  
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSD-- 583

Query: 517 MFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP------------ 564
                 V  G +         I   C+ G+   AI+ +  M   G               
Sbjct: 584 ------VCLGML------NDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVD 631

Query: 565 ----------------------DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEV 602
                                 D I Y  +I+GLCK+  L +A  L      +G+    +
Sbjct: 632 NLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTI 691

Query: 603 TRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKLCSERKVGMAALFF--H 657
           T  +L    C+      A+ + D LE    + +  T   L+  LC E       LF    
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKE------GLFLDAE 745

Query: 658 KLLD 661
           KLLD
Sbjct: 746 KLLD 749



 Score =  155 bits (391), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 199/453 (43%), Gaps = 47/453 (10%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++++F  +G   EA  +   M    + P+T T   ++K  C+ G ++ A  +F E+    
Sbjct: 453 LLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSS 512

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V   +  Y  ++ A CK G +  A + L  + ++G  +D  +   ++      G     L
Sbjct: 513 VSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGIL 571

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP------------ 318
              +    +     L      I  LCKRGS + A E+   M  +G               
Sbjct: 572 GLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVD 631

Query: 319 ----------------------NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNV 356
                                 +V  +T +I+GLCK+G+  KA  L     +S     N 
Sbjct: 632 NLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNL-CSFAKSRGVTLNT 690

Query: 357 LTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNL 416
           +TY ++ING C+   L  A  L   ++  GL+P+  TY  LID  CK G F  A  L++ 
Sbjct: 691 ITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDS 750

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           M  +G  PNI  YN+IVDG CK G+ ++A +++       +  D  T + +I  +CK+ D
Sbjct: 751 MVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGD 810

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES-----EMFFEEAV--RFGFIP 529
           +++AL++F++     I  D   +  LI  FC + RM E+     EM   E+V      + 
Sbjct: 811 MEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVD 870

Query: 530 TKRTYTSMICGY----CREGNLTMAIKFFHRMS 558
            +   +  I G+    C +G +  AIK    +S
Sbjct: 871 AELAESESIRGFLVELCEQGRVPQAIKILDEIS 903



 Score =  151 bits (381), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 210/510 (41%), Gaps = 88/510 (17%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G L  A  M+ +M  +G+ P+  T N V+   C  G V  A    +E+S +GV  D  +Y
Sbjct: 361 GNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA----DEVS-KGVVGDVITY 415

Query: 219 RVMVVAYCK-----------------------------------MGNVLEADKWLSVMLD 243
             ++ +Y K                                   MG   EAD     M +
Sbjct: 416 STLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPE 475

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ 303
                D A++  +I  +C+ G    AL  F++     +    + +  +I+ LCK+G +  
Sbjct: 476 MDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAA-VCYNRIIDALCKKGMLDT 534

Query: 304 AFEMLEEMVCQGWKPNVYTHTALIDG---------------------------------- 329
           A E+L E+  +G   +++T   L+                                    
Sbjct: 535 ATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAIL 594

Query: 330 -LCKKGWTEKAFRLFLKLVRS--ENNKPNVLTYTAMINGYCRDDKL---NRAEMLLGRMK 383
            LCK+G  E A  +++ + R       P+ +  T + N    D  L   N  E  L  M 
Sbjct: 595 LLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSM- 653

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
                 +   YT +I+G CK G   +A +L +     G + N  TYN++++GLC++G + 
Sbjct: 654 ------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLV 707

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
           EA ++     + GL   +VTY ILI   CK+     A  L   M   G+ P+I  Y +++
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
             +C+  +  ++       +     P   T +SMI GYC++G++  A+  F    D    
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
            D   +  LI G C + +++EARGL   M+
Sbjct: 828 ADFFGFLFLIKGFCTKGRMEEARGLLREML 857



 Score =  149 bits (375), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 176/370 (47%), Gaps = 16/370 (4%)

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP-NVLTYTAMINGYCRDDKL 372
            G  P+  T  +LI    +KG  + A  +   +     N P +    +A+I+G+C   K+
Sbjct: 128 HGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFC---KI 184

Query: 373 NRAEMLLGRMK---EQG-LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
            + E+ LG  +   + G L+PN  TYTTL+   C+ G  +   DL+  +  EGF  +   
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           Y+  + G  K G + +A    ++    G+  D V+Y+ILI    K+ ++++AL L  KM 
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
           K G++P++ +YT +I   C+  ++ E+ + F   +  G    +  Y ++I G CR+GNL 
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
            A      M   G  P  + Y T+I+GLC   ++ EA       + KG++   +T  TL 
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLL 419

Query: 609 YEYCKIDDCCSAMVILDR-LEKKLWIRTA--TTLVRKLCSERKVGMAALFFHKLLDMDFH 665
             Y K+ +  + + I  R LE K+ +       L++        G A   +  + +MD  
Sbjct: 420 DSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479

Query: 666 VNRVTLAAFM 675
            +  T A  +
Sbjct: 480 PDTATYATMI 489


>AT5G38730.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:15510901-15512691 FORWARD
           LENGTH=596
          Length = 596

 Score =  199 bits (507), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 255/548 (46%), Gaps = 65/548 (11%)

Query: 91  QAVTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQ- 149
           Q ++ ++  +G  G  ++ SFF W       +H ++        L  + + + AH+++  
Sbjct: 46  QVISELSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDK 105

Query: 150 ----------CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
                      ++RS   +G + E  E V           +   + +M    + G+++ +
Sbjct: 106 LAQRELLSSPLVLRSL--VGGVSEDPEDV-----------SHVFSWLMIYYAKAGMINDS 152

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
             +FE++ + G+ P         +  C                           T++++ 
Sbjct: 153 IVVFEQIRSCGLKPH--------LQAC---------------------------TVLLNS 177

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
             ++       + F K   +G+  N+  +  ++    K G  ++A ++L EM  +G  P+
Sbjct: 178 LVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPD 237

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
           ++T+  LI   CKK    +A  +  ++ RS    PN++TY + I+G+ R+ ++  A  L 
Sbjct: 238 IFTYNTLISVYCKKSMHFEALSVQDRMERS-GVAPNIVTYNSFIHGFSREGRMREATRLF 296

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
             +K+  +  N  TYTTLIDG+C+  + + A  L  +M   GFSP + TYN+I+  LC+ 
Sbjct: 297 REIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCED 355

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
           GR++EA ++L +     +E D +T N LI+ +CK  D+  A+ +  KM +SG++ D++SY
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSY 415

Query: 500 TTLIAVFCR--EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
             LI  FC+  E   ++ E+F    +  GF P   TY+ ++ G+  +       K     
Sbjct: 416 KALIHGFCKVLELENAKEELF--SMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEF 473

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDC 617
              G   D   Y  LI  +CK  ++D A+ L++SM +KGL+   V   T+AY Y +    
Sbjct: 474 EKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKV 533

Query: 618 CSAMVILD 625
             A  + D
Sbjct: 534 TEASALFD 541



 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 188/396 (47%), Gaps = 6/396 (1%)

Query: 160 RLKEAVEMVFE-MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           RL + V  +F+ M   G+V N    N+++    + G  + A+ L  EM  +GV PD  +Y
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTY 241

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             ++  YCK     EA      M   G   +  ++   I  F  +G    A R F +  D
Sbjct: 242 NTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD 301

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
             +  N + +T++I+G C+   I +A  + E M  +G+ P V T+ +++  LC+ G   +
Sbjct: 302 -DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIRE 360

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A RL  ++   +  +P+ +T   +IN YC+ + +  A  +  +M E GL  +  +Y  LI
Sbjct: 361 ANRLLTEM-SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
            G CK    E A + +  M  +GFSP   TY+ +VDG   + +  E  K+L++    GL 
Sbjct: 420 HGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC 479

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
           AD   Y  LI   CK   +  A  LF  M K G+  D   +TT+   + R  +++E+   
Sbjct: 480 ADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASAL 539

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFF 554
           F+       +   + Y S+   Y  + ++   ++FF
Sbjct: 540 FDVMYNRRLMVNLKLYKSISASYAGDNDV---LRFF 572



 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 222/482 (46%), Gaps = 31/482 (6%)

Query: 219 RVMVVAYCKMGNVLEADKWLSVM---LDRGFLVDNASFTLIISEFCE-KGFATRALRY-F 273
           R  ++A      VL+ + W +++   +D G L+ +A  T +ISE     G+   +L + F
Sbjct: 9   REALIAQSICATVLKGN-WKNILKHKVDSG-LLKSAITTQVISELSLFSGYGGPSLSWSF 66

Query: 274 HKFSDM--GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
             ++D     K +L +   MI  L K    K A ++L+++  +    +     +L+ G+ 
Sbjct: 67  FIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGV- 125

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
                            SE+ +     ++ ++  Y +   +N + ++  +++  GL P+ 
Sbjct: 126 -----------------SEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHL 168

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
              T L++   K    +  + +   M + G   NI  YN +V    K G  ++A K+L +
Sbjct: 169 QACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSE 228

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
               G+  D  TYN LIS +CK++   +AL++  +M +SG+ P+I +Y + I  F RE R
Sbjct: 229 MEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGR 288

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
           M E+   F E ++        TYT++I GYCR  ++  A++    M   G  P  + Y +
Sbjct: 289 MREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNS 347

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK-- 629
           ++  LC+  ++ EA  L   M  K + P  +T  TL   YCKI+D  SA+ +  ++ +  
Sbjct: 348 ILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG 407

Query: 630 -KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVS 688
            KL + +   L+   C   ++  A      +++  F     T +  +   Y  NK   ++
Sbjct: 408 LKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEIT 467

Query: 689 DL 690
            L
Sbjct: 468 KL 469



 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 1/116 (0%)

Query: 134 SLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM 193
           S+I  G     +     +V  F    +  E  +++ E   +G+  +      +++  C++
Sbjct: 437 SMIEKG-FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKL 495

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVD 249
             VDYA+ LFE M  +G+  DS  +  M  AY + G V EA     VM +R  +V+
Sbjct: 496 EQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVN 551


>AT1G19290.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:6666249-6668963 FORWARD
           LENGTH=904
          Length = 904

 Score =  197 bits (502), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/554 (25%), Positives = 261/554 (47%), Gaps = 22/554 (3%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   +++ +AE G +K A+ +   M N G +P+  + N ++      G    A +++++M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDR----GFLVDNASFTLIISEFCE 262
            +  V PD  +  ++V AYC+ GNV   DK +    +     G  ++  ++  +I+ +  
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNV---DKAMVFAKETESSLGLELNVVTYNSLINGYAM 273

Query: 263 KGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQA---FEMLEEMVCQGWKPN 319
            G      R     S+ G+  N++ +TS+I+G CK+G +++A   FE+L+E   +    +
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE---KKLVAD 330

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
            + +  L+DG C+ G    A R+   ++     + N     ++INGYC+  +L  AE + 
Sbjct: 331 QHMYGVLMDGYCRTGQIRDAVRVHDNMIEI-GVRTNTTICNSLINGYCKSGQLVEAEQIF 389

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
            RM +  L P+ +TY TL+DG+C+AG  + A  L + M ++   P + TYN ++ G  + 
Sbjct: 390 SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
           G   +   + K     G+ AD+++ + L+    K  D  +A+ L+  +   G+  D  + 
Sbjct: 450 GAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITL 509

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
             +I+  C+ ++++E++   +    F   P  +TY ++  GY + GNL  A      M  
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569

Query: 560 HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCS 619
            G  P    Y TLISG  K   L++   L   +  +GL P   T   L   +C I     
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629

Query: 620 AMVI-LDRLEK--KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMD-----FHVNRVTL 671
           A     + +EK   L +   + +   L    K+  A L   K++D D     +   +  L
Sbjct: 630 AYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFL 689

Query: 672 AAFMTACYESNKYA 685
            A  T C ++ K A
Sbjct: 690 EASATTCLKTQKIA 703



 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 228/497 (45%), Gaps = 23/497 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  + + G+L EA ++   M++  + P+  T N ++   C  G VD A  L ++M  + 
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V P   +Y +++  Y ++G   +      +ML RG   D  S + ++    + G    A+
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + +      GL  + I    MI GLCK   + +A E+L+ +     KP V T+ AL  G 
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K G  ++AF +   + R +   P +  Y  +I+G  +   LN+   L+  ++ +GL P 
Sbjct: 552 YKVGNLKEAFAVKEYMER-KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA----- 445
             TY  LI G C  G  ++A+     M  +G + N+   + I + L +  ++ EA     
Sbjct: 611 VATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQ 670

Query: 446 ----YKMLKDGFHN---GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
               + +L  G+ +    LEA   T        C +   K A ++ +   K  + P+   
Sbjct: 671 KIVDFDLLLPGYQSLKEFLEASATT--------CLKTQ-KIAESVENSTPKKLLVPNNIV 721

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVRFG-FIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
           Y   IA  C+  ++ ++   F + +    FIP + TYT +I G    G++  A      M
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDC 617
           +  G +P+ + Y  LI GLCK   +D A+ L   + +KG+ P  +T  TL     K  + 
Sbjct: 782 ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNV 841

Query: 618 CSAMVILDRLEKKLWIR 634
             AM + +++ +K  +R
Sbjct: 842 AEAMRLKEKMIEKGLVR 858



 Score =  165 bits (417), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/581 (22%), Positives = 246/581 (42%), Gaps = 51/581 (8%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  +A IG ++    ++  M  +G+  N  T   ++K  C+ GL++ A+++FE +  + 
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +  D   Y V++  YC+ G + +A +    M++ G   +      +I+ +C+ G    A 
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAE 386

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + F + +D  LKP+   + ++++G C+ G + +A ++ ++M  +   P V T+  L+ G 
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNV---------------------------------- 356
            + G       L+  +++   N   +                                  
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 506

Query: 357 LTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNL 416
           +T   MI+G C+ +K+N A+ +L  +      P   TY  L  G+ K GN + AF +   
Sbjct: 507 ITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEY 566

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           M R+G  P I  YN ++ G  K   + +   ++ +    GL     TY  LI+  C    
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFI-PTKRTYT 535
           I +A A   +M + GI  +++  + +     R  ++ E+ +  ++ V F  + P  ++  
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686

Query: 536 SMICGYCREGNLTMAIK-------FFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGL 588
             +     E + T  +K         +       VP++I Y   I+GLCK  KL++AR L
Sbjct: 687 EFL-----EASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKL 741

Query: 589 YDSMIEKG-LIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKLC 644
           +  ++     IP E T   L +      D   A  + D +  K  I    T   L++ LC
Sbjct: 742 FSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLC 801

Query: 645 SERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYA 685
               V  A    HKL       N +T    +    +S   A
Sbjct: 802 KLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVA 842



 Score =  161 bits (408), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 206/476 (43%), Gaps = 40/476 (8%)

Query: 134 SLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM 193
           S + + +L+  H     +V  +   G + EA+++  +M  + +VP   T N+++K    +
Sbjct: 390 SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF 253
           G       L++ M  RGV+ D  S   ++ A  K+G+  EA K    +L RG L D  + 
Sbjct: 450 GAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITL 509

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
            ++IS  C+      A       +    KP +  + ++  G  K G++K+AF + E M  
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
           +G  P +  +  LI G  K     K   L ++L R+    P V TY A+I G+C    ++
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL-RARGLTPTVATYGALITGWCNIGMID 628

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA---------FDLM---------- 414
           +A      M E+G+  N N  + + +   +    + A         FDL+          
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEF 688

Query: 415 -------------------NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN 455
                              N   ++   PN   YN  + GLCK G++++A K+  D   +
Sbjct: 689 LEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748

Query: 456 G-LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
                D+ TY ILI       DI +A  L  +MA  GI P+I +Y  LI   C+   +  
Sbjct: 749 DRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           ++    +  + G  P   TY ++I G  + GN+  A++   +M + G V  S   G
Sbjct: 809 AQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQG 864



 Score =  134 bits (337), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 157/334 (47%), Gaps = 10/334 (2%)

Query: 132 ATSLIGNGNL---QKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMK 188
           A  ++ N N+   + A +  Q +   + ++G LKEA  +   M  +G+ P  +  N ++ 
Sbjct: 525 AKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584

Query: 189 IACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLV 248
            A +   ++    L  E+ ARG+ P  A+Y  ++  +C +G + +A      M+++G  +
Sbjct: 585 GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644

Query: 249 DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           +    + I +          A     K  D  L   L  + S+ E L    +     + +
Sbjct: 645 NVNICSKIANSLFRLDKIDEACLLLQKIVDFDLL--LPGYQSLKEFLEASATTCLKTQKI 702

Query: 309 EEMVCQGWK-----PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMI 363
            E V          PN   +   I GLCK G  E A +LF  L+ S+   P+  TYT +I
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762

Query: 364 NGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS 423
           +G      +N+A  L   M  +G+IPN  TY  LI G CK GN +RA  L++ + ++G +
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822

Query: 424 PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           PN  TYN ++DGL K G V EA ++ +     GL
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856


>AT3G54980.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:20370293-20372848 FORWARD
           LENGTH=851
          Length = 851

 Score =  197 bits (501), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 223/449 (49%), Gaps = 1/449 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F + G +++A+E   +M   G+ P+   ++ +++   +    + A  LF+E    G
Sbjct: 380 LIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG 439

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +  +      ++   CK G   EA + LS M  RG   +  S+  ++   C +     A 
Sbjct: 440 L-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLAR 498

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F    + GLKPN   ++ +I+G  +    + A E++  M     + N   +  +I+GL
Sbjct: 499 IVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGL 558

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK G T KA  L   ++  +    + ++Y ++I+G+ ++ +++ A      M   G+ PN
Sbjct: 559 CKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPN 618

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TYT+L++G CK    ++A ++ + M  +G   +I  Y A++DG CK+  ++ A  +  
Sbjct: 619 VITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFS 678

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    GL   +  YN LIS      ++  AL L+ KM K G++ D+ +YTTLI    ++ 
Sbjct: 679 ELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDG 738

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
            +  +   + E    G +P +  YT ++ G  ++G     +K F  M  +   P+ + Y 
Sbjct: 739 NLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            +I+G  ++  LDEA  L+D M++KG++P
Sbjct: 799 AVIAGHYREGNLDEAFRLHDEMLDKGILP 827



 Score =  197 bits (500), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 230/479 (48%), Gaps = 39/479 (8%)

Query: 161 LKEAVEMVFEMHNQGM-VPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           L  A  ++ EM  + + VP+ +T   V+  + + G +D A  L +EM + G+  +  +  
Sbjct: 284 LAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAAT 343

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            ++  +CK  +++ A      M   G   ++ +F+++I  F + G   +AL ++ K   +
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           GL P++ +  ++I+G  K    ++A ++ +E    G   NV+    ++  LCK+G T++A
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEA 462

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             L  K+  S    PNV++Y  ++ G+CR   ++ A ++   + E+GL PN  TY+ LID
Sbjct: 463 TELLSKM-ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521

Query: 400 G-----------------------------------HCKAGNFERAFDLM-NLMSREGFS 423
           G                                    CK G   +A +L+ N++  +   
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581

Query: 424 PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALAL 483
            +  +YN+I+DG  K+G +  A    ++   NG+  + +TY  L++  CK   + QAL +
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641

Query: 484 FSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCR 543
             +M   G++ DI +Y  LI  FC+   M  +   F E +  G  P++  Y S+I G+  
Sbjct: 642 RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701

Query: 544 EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEV 602
            GN+  A+  + +M   G   D   Y TLI GL K   L  A  LY  M   GL+P E+
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI 760



 Score =  193 bits (490), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/555 (24%), Positives = 261/555 (47%), Gaps = 7/555 (1%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
           Q ++R+     +  EA+E++     +G  P++   +L ++  C+   +  A  L  EM  
Sbjct: 237 QLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKE 296

Query: 209 RGV-HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
           + +  P   +Y  +++A  K GN+ +A +    ML  G  ++  + T +I+  C+     
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLV 356

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
            AL  F K    G  PN + F+ +IE   K G +++A E  ++M   G  P+V+    +I
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
            G  K    E+A +LF +    E    NV     +++  C+  K + A  LL +M+ +G+
Sbjct: 417 QGWLKGQKHEEALKLFDESF--ETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            PN  +Y  ++ GHC+  N + A  + + +  +G  PN  TY+ ++DG  +    Q A +
Sbjct: 475 GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG-IQPDIHSYTTLIAVF 506
           ++     + +E + V Y  +I+  CK     +A  L + M +   +     SY ++I  F
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594

Query: 507 CREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS 566
            +E  M  +   +EE    G  P   TYTS++ G C+   +  A++    M + G   D 
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654

Query: 567 IAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDR 626
            AYG LI G CK+S ++ A  L+  ++E+GL P +    +L   +  + +  +A+ +  +
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714

Query: 627 LEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
           + K   +  + T TTL+  L  +  + +A+  + ++  +    + +     +    +  +
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774

Query: 684 YALVSDLSARIYKDN 698
           +  V  +   + K+N
Sbjct: 775 FVKVVKMFEEMKKNN 789



 Score =  191 bits (484), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 222/454 (48%), Gaps = 18/454 (3%)

Query: 138 NGNLQKAHEVMQCM---------------VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQT 182
           NG ++KA E  + M               ++ + +  + +EA+++  E    G+  N   
Sbjct: 387 NGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFV 445

Query: 183 LNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVML 242
            N ++   C+ G  D A  L  +M +RG+ P+  SY  +++ +C+  N+  A    S +L
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL 505

Query: 243 DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIK 302
           ++G   +N +++++I           AL   +  +   ++ N + + ++I GLCK G   
Sbjct: 506 EKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565

Query: 303 QAFEMLEEMVCQGWK-PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTA 361
           +A E+L  M+ +     +  ++ ++IDG  K+G  + A   + ++       PNV+TYT+
Sbjct: 566 KARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC-GNGISPNVITYTS 624

Query: 362 MINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
           ++NG C+++++++A  +   MK +G+  +   Y  LIDG CK  N E A  L + +  EG
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684

Query: 422 FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQAL 481
            +P+   YN+++ G    G +  A  + K    +GL  D  TY  LI    K  ++  A 
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744

Query: 482 ALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGY 541
            L+++M   G+ PD   YT ++    ++ +  +    FEE  +    P    Y ++I G+
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
            REGNL  A +    M D G +PD   +  L+SG
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838



 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/423 (20%), Positives = 168/423 (39%), Gaps = 49/423 (11%)

Query: 318 PNVYTHTA--LIDGLCKKGWTEKAFRLFLKLVRSENN---KPNVLTYTAMINGYCRDDKL 372
           P  Y   +  LI  +     T  A  L  KLV S  +   + N   +  ++N Y +D + 
Sbjct: 120 PETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQT 179

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
           + A  ++ +M E  +IP        +    +  +   A +L + M   G   +  T   +
Sbjct: 180 DHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLL 239

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
           +    ++ +  EA ++L      G E D + Y++ +   CK  D+  A +L  +M +  +
Sbjct: 240 MRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKL 299

Query: 493 -QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
             P   +YT++I    ++  M ++    +E +  G        TS+I G+C+  +L  A+
Sbjct: 300 CVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359

Query: 552 KFFHRMSDHGCVPDSIAYG-----------------------------------TLISGL 576
             F +M   G  P+S+ +                                    T+I G 
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW 419

Query: 577 CKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK---LWI 633
            K  K +EA  L+D   E GL    V    L++  CK      A  +L ++E +     +
Sbjct: 420 LKGQKHEEALKLFDESFETGLANVFVCNTILSW-LCKQGKTDEATELLSKMESRGIGPNV 478

Query: 634 RTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACY----ESNKYALVSD 689
            +   ++   C ++ + +A + F  +L+     N  T +  +  C+    E N   +V+ 
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538

Query: 690 LSA 692
           +++
Sbjct: 539 MTS 541


>AT1G13630.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:4670178-4672826 REVERSE
           LENGTH=798
          Length = 798

 Score =  197 bits (501), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/526 (26%), Positives = 247/526 (46%), Gaps = 21/526 (3%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +L++AV  +     + + P+  + N +M   C++G VD A+  F  +   G+ P   S+ 
Sbjct: 202 KLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHN 261

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++   C +G++ EA +  S M   G   D+ ++ ++   F   G  + A        D 
Sbjct: 262 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 321

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN-VYTHTALIDGLCKKGWTEK 338
           GL P++I +T ++ G C+ G+I     +L++M+ +G++ N +   + ++ GLCK G  ++
Sbjct: 322 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 381

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A  LF ++ +++   P+++ Y+ +I+G C+  K + A  L   M ++ ++PN+ T+  L+
Sbjct: 382 ALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
            G C+ G    A  L++ +   G + +I  YN ++DG  K G ++EA ++ K     G+ 
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
               T+N LI  +CK  +I +A  +   +   G+ P + SYTTL+  +         +  
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCR-----EGNLTMAIKFFHR-------MSDHGCVPDS 566
             E    G  PT  TY+ +  G CR       N  +  + F +       M   G  PD 
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620

Query: 567 IAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL-----AYEYCKIDDCCSAM 621
           I Y T+I  LC+   L  A    + M  + L     T   L      Y Y +  D  S +
Sbjct: 621 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD--SFI 678

Query: 622 VILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVN 667
             L      L     TTL++  C +    MA   FH+LL   F+V+
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724



 Score =  197 bits (500), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 221/477 (46%), Gaps = 49/477 (10%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++     +G + EA+E+  +M+  G+ P++ T N++ K    +G++  A  +  +M  +G
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDN-ASFTLIISEFCEKGFATRA 269
           + PD  +Y +++   C++GN+      L  ML RGF +++    ++++S  C+ G    A
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           L  F++    GL P+L+ ++ +I GLCK G    A  + +EM  +   PN  TH AL+ G
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442

Query: 330 LCKKGW-----------------------------------TEKAFRLFLKLVRSENNKP 354
           LC+KG                                     E+A  LF K+V      P
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF-KVVIETGITP 501

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           +V T+ ++I GYC+   +  A  +L  +K  GL P+  +YTTL+D +   GN +   +L 
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561

Query: 415 NLMSREGFSPNICTYNAIVDGLCK-----------KGRVQEAYKM-LKDGFHNGLEADKV 462
             M  EG  P   TY+ I  GLC+           + R+ E  K  L+D    G+  D++
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 621

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           TYN +I   C+   +  A      M    +     +Y  LI   C    + +++ F    
Sbjct: 622 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 681

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
                  +K  YT++I  +C +G+  MA+K FH++   G       Y  +I+ LC++
Sbjct: 682 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738



 Score =  194 bits (494), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 240/515 (46%), Gaps = 17/515 (3%)

Query: 179 NTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL 238
           N  T + V+   C    ++ A         + + P   S+  ++  YCK+G V  A  + 
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
             +L  G +    S  ++I+  C  G    AL      +  G++P+ + +  + +G    
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
           G I  A+E++ +M+ +G  P+V T+T L+ G C+ G  +    L   ++       +++ 
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
            + M++G C+  +++ A  L  +MK  GL P+   Y+ +I G CK G F+ A  L + M 
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
            +   PN  T+ A++ GLC+KG + EA  +L     +G   D V YNI+I  + K   I+
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
           +AL LF  + ++GI P + ++ +LI  +C+ + ++E+    +    +G  P+  +YT+++
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE-------------A 585
             Y   GN     +    M   G  P ++ Y  +  GLC+  K +               
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605

Query: 586 RGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRK 642
           +GL D M  +G+ P ++T  T+    C++     A V L+ ++ +    ++ T   L+  
Sbjct: 606 QGLRD-MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664

Query: 643 LCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
           LC    +  A  F + L + +  +++      + A
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699



 Score =  168 bits (426), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 180/375 (48%), Gaps = 13/375 (3%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+    + GR+ EA+ +  +M   G+ P+    ++V+   C++G  D A +L++EM  + 
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P+S ++  +++  C+ G +LEA   L  ++  G  +D   + ++I  + + G    AL
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F    + G+ P++  F S+I G CK  +I +A ++L+ +   G  P+V ++T L+D  
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK------------LNRAEML 378
              G T K+     + +++E   P  +TY+ +  G CR  K              + +  
Sbjct: 549 ANCGNT-KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
           L  M+ +G+ P+  TY T+I   C+  +   AF  + +M       +  TYN ++D LC 
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
            G +++A   +       +   K  Y  LI  HC + D + A+ LF ++   G    I  
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727

Query: 499 YTTLIAVFCREKRMS 513
           Y+ +I   CR   M+
Sbjct: 728 YSAVINRLCRRHLMN 742



 Score = 96.3 bits (238), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 135/308 (43%), Gaps = 46/308 (14%)

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
           +L +MK+Q L  +T +Y +++          R  D M  + +E    N  TY+ +VDGLC
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHF-------RETDKMWDVYKEIKDKNEHTYSTVVDGLC 198

Query: 438 KKGRVQEAYKML-----------------------KDGFHN------------GLEADKV 462
           ++ ++++A   L                       K GF +            GL     
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           ++NILI+  C    I +AL L S M K G++PD  +Y  L   F     +S +     + 
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS-IAYGTLISGLCKQSK 581
           +  G  P   TYT ++CG C+ GN+ M +     M   G   +S I    ++SGLCK  +
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 378

Query: 582 LDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWI---RTATT 638
           +DEA  L++ M   GL P  V    + +  CK+     A+ + D +  K  +   RT   
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438

Query: 639 LVRKLCSE 646
           L+  LC +
Sbjct: 439 LLLGLCQK 446


>AT1G13630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:4669784-4672826 REVERSE
           LENGTH=806
          Length = 806

 Score =  197 bits (501), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/548 (25%), Positives = 250/548 (45%), Gaps = 58/548 (10%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++     +G + EA+E+  +M+  G+ P++ T N++ K    +G++  A  +  +M  +G
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDN-ASFTLIISEFCEKGFATRA 269
           + PD  +Y +++   C++GN+      L  ML RGF +++    ++++S  C+ G    A
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           L  F++    GL P+L+ ++ +I GLCK G    A  + +EM  +   PN  TH AL+ G
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442

Query: 330 LCKKGW-----------------------------------TEKAFRLFLKLVRSENNKP 354
           LC+KG                                     E+A  LF K+V      P
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF-KVVIETGITP 501

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           +V T+ ++I GYC+   +  A  +L  +K  GL P+  +YTTL+D +   GN +   +L 
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561

Query: 415 NLMSREGFSPNICTYNAIVDGLCK-----------KGRVQEAYKM-LKDGFHNGLEADKV 462
             M  EG  P   TY+ I  GLC+           + R+ E  K  L+D    G+  D++
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 621

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           TYN +I   C+   +  A      M    +     +Y  LI   C    + +++ F    
Sbjct: 622 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 681

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
                  +K  YT++I  +C +G+  MA+K FH++   G       Y  +I+ LC++  +
Sbjct: 682 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLM 741

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKI--DDCCSAMVILDRLEKKLWIRTATTLV 640
           +   G  + +       C +     ++ YC I   +C    + +++L  ++ ++  + L 
Sbjct: 742 NCFPGQSNGV-------CCLISNERSFVYCPILSANCRRHTLSVEKLSHEVLLKMKSQLG 794

Query: 641 RKLCSERK 648
           +K   E K
Sbjct: 795 QKRTGESK 802



 Score =  197 bits (500), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/526 (26%), Positives = 247/526 (46%), Gaps = 21/526 (3%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +L++AV  +     + + P+  + N +M   C++G VD A+  F  +   G+ P   S+ 
Sbjct: 202 KLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHN 261

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++   C +G++ EA +  S M   G   D+ ++ ++   F   G  + A        D 
Sbjct: 262 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 321

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN-VYTHTALIDGLCKKGWTEK 338
           GL P++I +T ++ G C+ G+I     +L++M+ +G++ N +   + ++ GLCK G  ++
Sbjct: 322 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 381

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A  LF ++ +++   P+++ Y+ +I+G C+  K + A  L   M ++ ++PN+ T+  L+
Sbjct: 382 ALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
            G C+ G    A  L++ +   G + +I  YN ++DG  K G ++EA ++ K     G+ 
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
               T+N LI  +CK  +I +A  +   +   G+ P + SYTTL+  +         +  
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCR-----EGNLTMAIKFFHR-------MSDHGCVPDS 566
             E    G  PT  TY+ +  G CR       N  +  + F +       M   G  PD 
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620

Query: 567 IAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL-----AYEYCKIDDCCSAM 621
           I Y T+I  LC+   L  A    + M  + L     T   L      Y Y +  D  S +
Sbjct: 621 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD--SFI 678

Query: 622 VILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVN 667
             L      L     TTL++  C +    MA   FH+LL   F+V+
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724



 Score =  194 bits (493), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 240/515 (46%), Gaps = 17/515 (3%)

Query: 179 NTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL 238
           N  T + V+   C    ++ A         + + P   S+  ++  YCK+G V  A  + 
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
             +L  G +    S  ++I+  C  G    AL      +  G++P+ + +  + +G    
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
           G I  A+E++ +M+ +G  P+V T+T L+ G C+ G  +    L   ++       +++ 
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
            + M++G C+  +++ A  L  +MK  GL P+   Y+ +I G CK G F+ A  L + M 
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
            +   PN  T+ A++ GLC+KG + EA  +L     +G   D V YNI+I  + K   I+
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
           +AL LF  + ++GI P + ++ +LI  +C+ + ++E+    +    +G  P+  +YT+++
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE-------------A 585
             Y   GN     +    M   G  P ++ Y  +  GLC+  K +               
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605

Query: 586 RGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRK 642
           +GL D M  +G+ P ++T  T+    C++     A V L+ ++ +    ++ T   L+  
Sbjct: 606 QGLRD-MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664

Query: 643 LCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
           LC    +  A  F + L + +  +++      + A
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699



 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 135/308 (43%), Gaps = 46/308 (14%)

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
           +L +MK+Q L  +T +Y +++          R  D M  + +E    N  TY+ +VDGLC
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHF-------RETDKMWDVYKEIKDKNEHTYSTVVDGLC 198

Query: 438 KKGRVQEAYKML-----------------------KDGFHN------------GLEADKV 462
           ++ ++++A   L                       K GF +            GL     
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           ++NILI+  C    I +AL L S M K G++PD  +Y  L   F     +S +     + 
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS-IAYGTLISGLCKQSK 581
           +  G  P   TYT ++CG C+ GN+ M +     M   G   +S I    ++SGLCK  +
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 378

Query: 582 LDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWI---RTATT 638
           +DEA  L++ M   GL P  V    + +  CK+     A+ + D +  K  +   RT   
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438

Query: 639 LVRKLCSE 646
           L+  LC +
Sbjct: 439 LLLGLCQK 446


>AT1G03560.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr1:890428-892410 REVERSE
           LENGTH=660
          Length = 660

 Score =  195 bits (495), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 236/508 (46%), Gaps = 22/508 (4%)

Query: 107 VALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEV---------------MQCM 151
           +A SFF W+    ++ H +  Y+     L    ++ +   V                  +
Sbjct: 134 IAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANAL 193

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           ++SF ++G ++E + +  +M   G+ P   T N +M        VD A+ +FE M +  +
Sbjct: 194 IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI 253

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF-TLIISEFCEKGFATRAL 270
            PD  +Y  M+  YCK G   +A + L  M  RG   D  ++ T+I + + +  F +  +
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS-CV 312

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             + +  + G++     F+ +I GLCK G + + + + E M+ +G KPNV  +T LIDG 
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K G  E A RL  +++  E  KP+V+TY+ ++NG C++ ++  A       +  GL  N
Sbjct: 373 AKSGSVEDAIRLLHRMI-DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
           +  Y++LIDG  KAG  + A  L   MS +G + +   YNA++D   K  +V EA  + K
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491

Query: 451 D-GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
                 G +    TY IL+S   K+   ++AL L+  M   GI P    +  L    C  
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGC-VPDSIA 568
            +++ +    +E    G I        MI   C+ G +  A K    +++ G  VP  I 
Sbjct: 552 GKVARACKILDELAPMGVI-LDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIR 610

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKG 596
              +I+ L K  K D A  L  S I  G
Sbjct: 611 T-VMINALRKVGKADLAMKLMHSKIGIG 637



 Score =  170 bits (430), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 229/503 (45%), Gaps = 27/503 (5%)

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           VD  +++  E+         ++   ++ ++ K+G V E       M + G      ++  
Sbjct: 168 VDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 227

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           +++      F   A R F       +KP+++ + +MI+G CK G  ++A E L +M  +G
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK-----PNVLTYTAMINGYCRDD 370
            + +  T+  +I       + +  F   + L +  + K     P+   ++ +I G C++ 
Sbjct: 288 HEADKITYMTMIQAC----YADSDFGSCVALYQEMDEKGIQVPPH--AFSLVIGGLCKEG 341

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
           KLN    +   M  +G  PN   YT LIDG+ K+G+ E A  L++ M  EGF P++ TY+
Sbjct: 342 KLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 401

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            +V+GLCK GRV+EA         +GL  + + Y+ LI    K   + +A  LF +M++ 
Sbjct: 402 VVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEK 461

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEE-AVRFGFIPTKRTYTSMICGYCREGNLTM 549
           G   D + Y  LI  F + +++ E+   F+      G   T  TYT ++ G  +E     
Sbjct: 462 GCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEE 521

Query: 550 AIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI---PCEVTRIT 606
           A+K +  M D G  P +  +  L +GLC   K+  A  + D +   G+I    CE    T
Sbjct: 522 ALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINT 581

Query: 607 LAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAAL---FFHKLLDMD 663
           L  +  +I + C     +    +++  R  T ++  L   RKVG A L     H  + + 
Sbjct: 582 LC-KAGRIKEACKLADGITERGREVPGRIRTVMINAL---RKVGKADLAMKLMHSKIGIG 637

Query: 664 FH-----VNRVTLAAFMTACYES 681
           +        RV     +  C++S
Sbjct: 638 YERMGSVKRRVKFTTLLETCFDS 660



 Score =  154 bits (388), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 168/358 (46%), Gaps = 35/358 (9%)

Query: 237 WLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLC 296
           W+S +L+   L  +AS    +  FC K               + L PN ++F      + 
Sbjct: 85  WVSQILN--LLDGSASMESNLDGFCRKFL-------------IKLSPNFVSF------VL 123

Query: 297 KRGSIKQAFEMLEEMVCQGWKPNVYTHT-----ALIDGLCKKGWTEKAFRLFLKLVRSEN 351
           K   I++  ++     C   K   YTH      +L+D L      ++     ++ V SE 
Sbjct: 124 KSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDR-----IRFVSSEI 178

Query: 352 NKPNVLTYTAMINGYCRD-DKLNRAEMLLG---RMKEQGLIPNTNTYTTLIDGHCKAGNF 407
            K       +  N   +   KL   E LL    +MKE G+ P   TY  L++G   A   
Sbjct: 179 KKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFV 238

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           + A  +  +M      P+I TYN ++ G CK G+ Q+A + L+D    G EADK+TY  +
Sbjct: 239 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           I      +D    +AL+ +M + GIQ   H+++ +I   C+E +++E    FE  +R G 
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
            P    YT +I GY + G++  AI+  HRM D G  PD + Y  +++GLCK  +++EA
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 3/278 (1%)

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           K++    N   Y +L+D    A + +R   + + + +  F   +   NA++    K G V
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMV 203

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           +E   + +    NG+E    TYN L++       +  A  +F  M    I+PDI +Y T+
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGC 562
           I  +C+  +  ++     +    G    K TY +MI     + +    +  +  M + G 
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMV 622
                A+  +I GLCK+ KL+E   ++++MI KG  P       L   Y K      A+ 
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383

Query: 623 ILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFH 657
           +L R+     K  + T + +V  LC   +V  A  +FH
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFH 421


>AT5G14770.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:4772881-4775697 REVERSE
           LENGTH=938
          Length = 938

 Score =  194 bits (494), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 252/534 (47%), Gaps = 21/534 (3%)

Query: 148 MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS 207
           +  ++ SF ++GRL  A+ +   + N+ +  +T T N V+   CE GL D A     EM 
Sbjct: 132 LNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMV 188

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
             G+ PD+ SY  ++  +CK+GN + A      ++D    ++  + T+++S +       
Sbjct: 189 KMGILPDTVSYNTLIDGFCKVGNFVRA----KALVDEISELNLITHTILLSSYYNLHAIE 244

Query: 268 RALRYFHKFSDM---GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHT 324
            A R      DM   G  P+++ F+S+I  LCK G + +   +L EM      PN  T+T
Sbjct: 245 EAYR------DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYT 298

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKE 384
            L+D L K      A  L+ ++V       +++ YT +++G  +   L  AE     + E
Sbjct: 299 TLVDSLFKANIYRHALALYSQMV-VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357

Query: 385 QGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQE 444
              +PN  TYT L+DG CKAG+   A  ++  M  +   PN+ TY+++++G  KKG ++E
Sbjct: 358 DNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEE 417

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
           A  +L+      +  +  TY  +I    K    + A+ L  +M   G++ + +    L+ 
Sbjct: 418 AVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVN 477

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
              R  R+ E +   ++ V  G    +  YTS+I  + + G+   A+ +   M + G   
Sbjct: 478 HLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPW 537

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVIL 624
           D ++Y  LISG+ K  K+  A   Y  M EKG+ P   T   +     K  D    + + 
Sbjct: 538 DVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 596

Query: 625 DRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
           D+++    K  + +   +V  LC   K+  A    ++++ M+ H N  T   F+
Sbjct: 597 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650



 Score =  190 bits (483), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 236/471 (50%), Gaps = 12/471 (2%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLV-DYAQYLFEE 205
           +   + R +    RL  A   +  M   G+VP+++  N ++      GLV D    ++ +
Sbjct: 60  LFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSK 119

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           M A GV PD  +  V++ ++CK+G +  A   +S++ +R   +D  ++  +IS  CE G 
Sbjct: 120 MIACGVSPDVFALNVLIHSFCKVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGL 176

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
           A  A ++  +   MG+ P+ +++ ++I+G CK G+  +A  +++E+     + N+ THT 
Sbjct: 177 ADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELNLITHTI 232

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           L+         E+A+R    +V S  + P+V+T++++IN  C+  K+    +LL  M+E 
Sbjct: 233 LLSSYYNLHAIEEAYR---DMVMSGFD-PDVVTFSSIINRLCKGGKVLEGGLLLREMEEM 288

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
            + PN  TYTTL+D   KA  +  A  L + M   G   ++  Y  ++DGL K G ++EA
Sbjct: 289 SVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA 348

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            K  K    +    + VTY  L+   CK  D+  A  + ++M +  + P++ +Y+++I  
Sbjct: 349 EKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMING 408

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           + ++  + E+     +      +P   TY ++I G  + G   MAI+    M   G   +
Sbjct: 409 YVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEEN 468

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD 616
           +     L++ L +  ++ E +GL   M+ KG+   ++   +L   + K  D
Sbjct: 469 NYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519



 Score =  183 bits (465), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 228/480 (47%), Gaps = 29/480 (6%)

Query: 135 LIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMG 194
           LIG   +++ + ++  +V     IGR+KE   +V +M ++G+  +      ++ +  + G
Sbjct: 462 LIG---VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT 254
             + A    EEM  RG+  D  SY V++    K G V  AD     M ++G   D A+F 
Sbjct: 519 DEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFN 577

Query: 255 LIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ 314
           ++++   ++G +   L+ + K    G+KP+L++   ++  LC+ G +++A  +L +M+  
Sbjct: 578 IMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLM 637

Query: 315 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR 374
              PN+ T+   +D   K    +  F+    L+ S   K +   Y  +I   C+     +
Sbjct: 638 EIHPNLTTYRIFLDTSSKHKRADAIFKTHETLL-SYGIKLSRQVYNTLIATLCKLGMTKK 696

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVD 434
           A M++G M+ +G IP+T T+ +L+ G+    +  +A    ++M   G SPN+ TYN I+ 
Sbjct: 697 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756

Query: 435 GLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP 494
           GL   G ++E  K L +    G+  D  TYN LIS   K  ++K ++ ++ +M   G+ P
Sbjct: 757 GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816

Query: 495 DIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFF 554
              +Y  LI+ F    +M ++    +E  + G  P   TY +MI G C+           
Sbjct: 817 KTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL---------- 866

Query: 555 HRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI-EKGLIPCEVTRITLAYEYCK 613
                  C    + +        K   L EA+GL   M+ EKG IPC  T   ++  + K
Sbjct: 867 -------CTHPDVEWNK------KAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSK 913



 Score =  168 bits (425), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 241/499 (48%), Gaps = 10/499 (2%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+  + + G L+EAV ++ +M +Q +VPN  T   V+    + G  + A  L +EM   G
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V  ++     +V    ++G + E    +  M+ +G  +D  ++T +I  F + G    AL
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAAL 524

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSI--KQAFEMLEEMVCQGWKPNVYTHTALID 328
            +  +  + G+  +++++  +I G+ K G +    A++ + E   +G +P++ T   +++
Sbjct: 525 AWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMRE---KGIEPDIATFNIMMN 581

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
              K+G +E   +L+ K+ +S   KP++++   ++   C + K+  A  +L +M    + 
Sbjct: 582 SQRKQGDSEGILKLWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIH 640

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           PN  TY   +D   K    +  F     +   G   +   YN ++  LCK G  ++A  +
Sbjct: 641 PNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMV 700

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
           + D    G   D VT+N L+  +   + +++AL+ +S M ++GI P++ +Y T+I     
Sbjct: 701 MGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSD 760

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
              + E + +  E    G  P   TY ++I G  + GN+  ++  +  M   G VP +  
Sbjct: 761 AGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTST 820

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLE 628
           Y  LIS      K+ +AR L   M ++G+ P   T  T+    CK+  C    V  ++  
Sbjct: 821 YNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL--CTHPDVEWNK-- 876

Query: 629 KKLWIRTATTLVRKLCSER 647
           K +++  A  L++++  E+
Sbjct: 877 KAMYLAEAKGLLKEMVEEK 895



 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 222/516 (43%), Gaps = 41/516 (7%)

Query: 145 HEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFE 204
           H     +V S  +    + A+ +  +M  +G+  +     ++M    + G +  A+  F+
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353

Query: 205 EMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKG 264
            +      P+  +Y  +V   CK G++  A+  ++ ML++  + +  +++ +I+ + +KG
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKG 413

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHT 324
               A+    K  D  + PN   + ++I+GL K G  + A E+ +EM   G + N Y   
Sbjct: 414 MLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILD 473

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVR---------------------------------SEN 351
           AL++ L + G  ++   L   +V                                   E 
Sbjct: 474 ALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQER 533

Query: 352 NKP-NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA 410
             P +V++Y  +I+G  +  K+  A+     M+E+G+ P+  T+  +++   K G+ E  
Sbjct: 534 GMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGI 592

Query: 411 FDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISE 470
             L + M   G  P++ + N +V  LC+ G+++EA  +L       +  +  TY I +  
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652

Query: 471 HCKQADIKQALALF---SKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
             K    K+A A+F     +   GI+     Y TLIA  C+     ++ M   +    GF
Sbjct: 653 SSKH---KRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
           IP   T+ S++ GY    ++  A+  +  M + G  P+   Y T+I GL     + E   
Sbjct: 710 IPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDK 769

Query: 588 LYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVI 623
               M  +G+ P + T   L     KI +   +M I
Sbjct: 770 WLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805


>AT1G79540.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:29920334-29922676 REVERSE
           LENGTH=780
          Length = 780

 Score =  192 bits (489), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 221/465 (47%), Gaps = 41/465 (8%)

Query: 183 LNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVML 242
             LV+ +  E    D      EE+ + GV  DS  + V++ AY KMG   +A +    M 
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154

Query: 243 DRGFLVDNASFTLIISEFC-EKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSI 301
           +     D  ++ +I+     E+ F   A   +++       PNL  F  +++GL K+G  
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214

Query: 302 KQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTA 361
             A +M ++M  +G  PN  T+T LI GLC++G  + A +LF ++ ++  N P+ + + A
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM-QTSGNYPDSVAHNA 273

Query: 362 MINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
           +++G+C+  ++  A  LL   ++ G +     Y++LIDG  +A  + +AF+L   M ++ 
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN 333

Query: 422 FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQAL 481
             P+I  Y  ++ GL K G++++A K+L      G+  D   YN +I   C +  +++  
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGR 393

Query: 482 ALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGY 541
           +L  +M+++   PD  ++T LI   CR   + E+E  F E  + G  P+  T+ ++I G 
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453

Query: 542 CREGNLTMAIKFFHRM---------------------------------------SDHGC 562
           C+ G L  A    H+M                                       +D G 
Sbjct: 454 CKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGS 513

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
            PD ++Y  LI+G C+   +D A  L + +  KGL P  VT  TL
Sbjct: 514 SPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558



 Score =  190 bits (483), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 260/551 (47%), Gaps = 26/551 (4%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           GR  +A +M  +M  +G+ PN  T  +++   C+ G  D A+ LF EM   G +PDS ++
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             ++  +CK+G ++EA + L +    GF++    ++ +I         T+A   +     
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
             +KP++I +T +I+GL K G I+ A ++L  M  +G  P+ Y + A+I  LC +G  E+
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
              L L++  +E+  P+  T+T +I   CR+  +  AE +   +++ G  P+  T+  LI
Sbjct: 392 GRSLQLEMSETESF-PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNIC------TYNAIVDGLCKKGRVQEAYKMLKDG 452
           DG CK+G  + A  L++ M  E   P         + N   D + + G + +AY+ L   
Sbjct: 451 DGLCKSGELKEARLLLHKM--EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHF 508

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
              G   D V+YN+LI+  C+  DI  AL L + +   G+ PD  +Y TLI    R  R 
Sbjct: 509 ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR-MSDHGCVPDSIAYGT 571
            E+   F     F   P    Y S++   CR+  + +A   + + +    C+ D  A   
Sbjct: 569 EEAFKLFYAKDDFRHSPA--VYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETA--N 624

Query: 572 LISGLCKQSKLDEA-RGLYDSMIEKG---LIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
            I    K+ + + A R L +    K    L P  +  I L    C+      A+++   L
Sbjct: 625 EIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGL----CQSGRFHEALMVFSVL 680

Query: 628 -EKKLWIRTAT--TLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESN-K 683
            EKK+ +   +   L+  LC   ++  A   F   LD +F +        +++  ES  K
Sbjct: 681 REKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEK 740

Query: 684 YALVSDLSARI 694
             +VS L+ R+
Sbjct: 741 MEIVSQLTNRM 751



 Score =  179 bits (455), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 222/452 (49%), Gaps = 22/452 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIAC-EMGLVDYAQYLFEEMSAR 209
           ++ ++A++G  ++AVE    M      P+  T N+++++   E      A  ++ EM   
Sbjct: 133 LISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
              P+  ++ +++    K G   +A K    M  RG   +  ++T++IS  C++G A  A
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDA 252

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
            + F++    G  P+ +   ++++G CK G + +AFE+L      G+   +  +++LIDG
Sbjct: 253 RKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDG 312

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
           L +     +AF L+  +++ +N KP+++ YT +I G  +  K+  A  LL  M  +G+ P
Sbjct: 313 LFRARRYTQAFELYANMLK-KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISP 371

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           +T  Y  +I   C  G  E    L   MS     P+ CT+  ++  +C+ G V+EA ++ 
Sbjct: 372 DTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIF 431

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQA------------LALFSKMAKSGIQPDIH 497
            +   +G      T+N LI   CK  ++K+A             +LF +++ SG +    
Sbjct: 432 TEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNR---- 487

Query: 498 SYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
           S+ T++      K   +   F +     G  P   +Y  +I G+CR G++  A+K  + +
Sbjct: 488 SFDTMVESGSILKAYRDLAHFADT----GSSPDIVSYNVLINGFCRAGDIDGALKLLNVL 543

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLY 589
              G  PDS+ Y TLI+GL +  + +EA  L+
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575



 Score =  131 bits (330), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 160/376 (42%), Gaps = 5/376 (1%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           F  +I+ L +       ++ LEE+   G   + Y    LI    K G  EKA   F ++ 
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRM- 153

Query: 348 RSENNKPNVLTYTAMINGYCRDDKL-NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN 406
           +  + +P+V TY  ++    R++     A  +   M +    PN  T+  L+DG  K G 
Sbjct: 154 KEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
              A  + + M+  G SPN  TY  ++ GLC++G   +A K+  +   +G   D V +N 
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           L+   CK   + +A  L     K G    +  Y++LI    R +R +++   +   ++  
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN 333

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
             P    YT +I G  + G +  A+K    M   G  PD+  Y  +I  LC +  L+E R
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGR 393

Query: 587 GLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK---KLWIRTATTLVRKL 643
            L   M E    P   T   L    C+      A  I   +EK      + T   L+  L
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453

Query: 644 CSERKVGMAALFFHKL 659
           C   ++  A L  HK+
Sbjct: 454 CKSGELKEARLLLHKM 469


>AT1G06580.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:2014440-2015942 REVERSE
           LENGTH=500
          Length = 500

 Score =  191 bits (486), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 232/483 (48%), Gaps = 19/483 (3%)

Query: 135 LIGNGNLQKAHEVMQCMVRSFAEIGR---------------LKEAVEMVFEMHNQGMVPN 179
           L+  GNL  A  +  C  R+F+  GR                 +A+ +  +M     +P+
Sbjct: 21  LLEKGNLVTALSLRICNSRAFS--GRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPS 78

Query: 180 TQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLS 239
               + ++    ++   +    LF  +   G+  D  S+  ++  +C+   +  A   L 
Sbjct: 79  IVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLG 138

Query: 240 VMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRG 299
            M+  GF     +F  +++ FC       A+    +   +G +PN++ + ++I+ LC++G
Sbjct: 139 KMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG 198

Query: 300 SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
            +  A ++L+ M   G +P+V T+ +LI  L   G    + R+   ++R     P+V+T+
Sbjct: 199 QVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM-GISPDVITF 257

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
           +A+I+ Y ++ +L  A+     M ++ + PN  TY +LI+G C  G  + A  ++N++  
Sbjct: 258 SALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
           +GF PN  TYN +++G CK  RV +  K+L     +G++ D  TYN L   +C+      
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSA 377

Query: 480 ALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMIC 539
           A  +  +M   G+ PD++++  L+   C   ++ ++ +  E+  +   +    TY  +I 
Sbjct: 378 AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIK 437

Query: 540 GYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI-EKGLI 598
           G C+   +  A   F  ++  G  PD I Y T++ GL ++    EA  LY  M  E GL+
Sbjct: 438 GLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLM 497

Query: 599 PCE 601
           P +
Sbjct: 498 PIK 500



 Score =  160 bits (405), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 182/391 (46%), Gaps = 4/391 (1%)

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           AL  F   ++    P++++F+ ++  + K    +    +   +   G   ++Y+ T LID
Sbjct: 63  ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
             C+      A     K+++    +P+++T+ +++NG+C  ++   A  L+ ++   G  
Sbjct: 123 CFCRCARLSLALSCLGKMMKL-GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           PN   Y T+ID  C+ G    A D++  M + G  P++ TYN+++  L   G    + ++
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
           L D    G+  D +T++ LI  + K+  + +A   +++M +  + P+I +Y +LI   C 
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
              + E++      V  GF P   TY ++I GYC+   +   +K    MS  G   D+  
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLE 628
           Y TL  G C+  K   A  +   M+  G+ P   T   L    C       A+V L+ L+
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421

Query: 629 KK---LWIRTATTLVRKLCSERKVGMAALFF 656
           K    + I T   +++ LC   KV  A   F
Sbjct: 422 KSKTVVGIITYNIIIKGLCKADKVEDAWYLF 452



 Score =  142 bits (359), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 4/348 (1%)

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A  LF  +  S +  P+++ ++ ++    + +K      L   ++  G+  +  ++TTLI
Sbjct: 63  ALTLFCDMAES-HPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
           D  C+      A   +  M + GF P+I T+ ++V+G C   R  EA  ++      G E
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            + V YN +I   C++  +  AL +   M K GI+PD+ +Y +LI           S   
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
             + +R G  P   T++++I  Y +EG L  A K ++ M      P+ + Y +LI+GLC 
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301

Query: 579 QSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK---IDDCCSAMVILDRLEKKLWIRT 635
              LDEA+ + + ++ KG  P  VT  TL   YCK   +DD    + ++ R        T
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361

Query: 636 ATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
             TL +  C   K   A     +++    H +  T    +    +  K
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409


>AT1G13040.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr1:4447647-4449200 FORWARD
           LENGTH=517
          Length = 517

 Score =  191 bits (485), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 221/453 (48%), Gaps = 2/453 (0%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           + +  + G +  AV++  EM +      +   N  + +       + A+ ++ +M   G 
Sbjct: 16  IANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGF 75

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
                +Y   +   CK+      D  LS M   GF+ D  +F + +   C +     A++
Sbjct: 76  SLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQ 135

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
            F      G +P+++++T +I GL + G +  A E+   M+  G  P+     AL+ GLC
Sbjct: 136 TFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLC 195

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
                + A+ +  + ++S   K + + Y A+I+G+C+  ++ +AE L   M + G  P+ 
Sbjct: 196 HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL 255

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK-MLK 450
            TY  L++ +      +RA  +M  M R G   +  +YN ++   C+     + Y  M+K
Sbjct: 256 VTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK 315

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    G   D V+Y+ LI   C+ ++ ++A  LF +M + G+  ++ +YT+LI  F RE 
Sbjct: 316 EMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREG 374

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
             S ++   ++    G  P +  YT+++   C+ GN+  A   F+ M +H   PD+I+Y 
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
           +LISGLC+  ++ EA  L++ M  K   P E+T
Sbjct: 435 SLISGLCRSGRVTEAIKLFEDMKGKECCPDELT 467



 Score =  185 bits (469), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 233/500 (46%), Gaps = 20/500 (4%)

Query: 113 HWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAE-----IG------RL 161
           H  +G  R  +  R+  +  + +I N  +Q   E+     R F+      IG      R 
Sbjct: 2   HQTLGAVRLAYRSRIANLVKSGMIDNA-VQVFDEMRHSSYRVFSFDYNRFIGVLVRESRF 60

Query: 162 KEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVM 221
           + A  + ++M   G      T +  +   C++   D    L  +M   G  PD  ++ V 
Sbjct: 61  ELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVY 120

Query: 222 VVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGL 281
           +   C+   V  A +    M+ RG   D  S+T++I+     G  T A+  ++     G+
Sbjct: 121 LDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGV 180

Query: 282 KPNLINFTSMIEGLCKRGSIKQAFEML-EEMVCQGWKPNVYTHTALIDGLCKKGWTEKA- 339
            P+     +++ GLC    +  A+EM+ EE+     K +   + ALI G CK G  EKA 
Sbjct: 181 SPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAE 240

Query: 340 -FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
             + ++  +  E   P+++TY  ++N Y  ++ L RAE ++  M   G+  +  +Y  L+
Sbjct: 241 ALKSYMSKIGCE---PDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL 297

Query: 399 DGHCKAGNFERAFDLM-NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
             HC+  + ++ ++ M   M   GF  ++ +Y+ +++  C+    ++AY++ ++    G+
Sbjct: 298 KRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGM 356

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
             + VTY  LI    ++ +   A  L  +M + G+ PD   YTT++   C+   + ++  
Sbjct: 357 VMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYG 416

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
            F + +     P   +Y S+I G CR G +T AIK F  M    C PD + +  +I GL 
Sbjct: 417 VFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLI 476

Query: 578 KQSKLDEARGLYDSMIEKGL 597
           +  KL  A  ++D M++KG 
Sbjct: 477 RGKKLSAAYKVWDQMMDKGF 496



 Score =  181 bits (460), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 232/488 (47%), Gaps = 23/488 (4%)

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVL---------EADKWLSVMLDR 244
           G++D A  +F+EM         +SYRV    Y +   VL         EA  W   M   
Sbjct: 23  GMIDNAVQVFDEMR-------HSSYRVFSFDYNRFIGVLVRESRFELAEAIYW--DMKPM 73

Query: 245 GFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQA 304
           GF +   +++  IS  C+                +G  P++  F   ++ LC+   +  A
Sbjct: 74  GFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFA 133

Query: 305 FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN 364
            +    MV +G +P+V ++T LI+GL + G    A  ++  ++RS    P+     A++ 
Sbjct: 134 VQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKACAALVV 192

Query: 365 GYCRDDKLNRA-EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS 423
           G C   K++ A EM+   +K   +  +T  Y  LI G CKAG  E+A  L + MS+ G  
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCE 252

Query: 424 PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALAL 483
           P++ TYN +++       ++ A  ++ +   +G++ D  +YN L+  HC+ +   +    
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF 312

Query: 484 FSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCR 543
             K  +     D+ SY+TLI  FCR     ++   FEE  + G +    TYTS+I  + R
Sbjct: 313 MVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR 372

Query: 544 EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
           EGN ++A K   +M++ G  PD I Y T++  LCK   +D+A G+++ MIE  + P  ++
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAIS 432

Query: 604 RITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKLCSERKVGMAALFFHKLL 660
             +L    C+      A+ + + ++ K       T   ++  L   +K+  A   + +++
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM 492

Query: 661 DMDFHVNR 668
           D  F ++R
Sbjct: 493 DKGFTLDR 500



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 12/195 (6%)

Query: 428 TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM 487
            Y + +  L K G +  A ++  +  H+        YN  I    +++  + A A++  M
Sbjct: 11  AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70

Query: 488 AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNL 547
              G      +Y+  I+  C+ K+    +    +    GFIP    +   +   CRE  +
Sbjct: 71  KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130

Query: 548 TMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP-------- 599
             A++ F  M   G  PD ++Y  LI+GL +  K+ +A  ++++MI  G+ P        
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190

Query: 600 ----CEVTRITLAYE 610
               C   ++ LAYE
Sbjct: 191 VVGLCHARKVDLAYE 205



 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 19/210 (9%)

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
           H  L A ++ Y   I+   K   I  A+ +F +M  S  +     Y   I V  RE R  
Sbjct: 2   HQTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFE 61

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
            +E  + +    GF     TY+  I G C+     +       M   G +PD  A+   +
Sbjct: 62  LAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYL 121

Query: 574 SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW- 632
             LC+++K+  A   +  M+++G  P  V+   L      I+    A  + D +E  +W 
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGREPDVVSYTIL------INGLFRAGKVTDAVE--IWN 173

Query: 633 --IRTATT--------LVRKLCSERKVGMA 652
             IR+  +        LV  LC  RKV +A
Sbjct: 174 AMIRSGVSPDNKACAALVVGLCHARKVDLA 203


>AT1G22960.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:8128086-8130242 REVERSE
           LENGTH=718
          Length = 718

 Score =  191 bits (484), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 233/489 (47%), Gaps = 42/489 (8%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
           N++ +      ++  F++ G+++EA     +M   G      + N +++  C+ GL D A
Sbjct: 268 NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA 327

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
             + +EM   G++P +++Y + + A C  G + +A + LS M                  
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----------------- 370

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
                                  P+++++ +++ G  K G   +A  + +++      P+
Sbjct: 371 ----------------------APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS 408

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
           + T+  LIDGLC+ G  E A RL  ++  ++   P+V+TYT ++ G+ ++  L+ A  + 
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMT-TQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN-LMSREGFSPNICTYNAIVDGLCK 438
             M  +G+ P+   YTT   G  + G+ ++AF L   +++ +  +P++  YN  +DGLCK
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
            G + +A +  +  F  GL  D VTY  +I  + +    K A  L+ +M +  + P + +
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS 558
           Y  LI    +  R+ ++  +  E  + G  P   T+ +++ G C+ GN+  A ++  +M 
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647

Query: 559 DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCC 618
           + G  P+  +Y  LIS  C   K +E   LY  M++K + P   T   L +++ + D   
Sbjct: 648 EEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL-FKHLEKDHES 706

Query: 619 SAMVILDRL 627
             +  L+RL
Sbjct: 707 REVEFLERL 715



 Score =  188 bits (477), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 230/516 (44%), Gaps = 12/516 (2%)

Query: 161 LKEAVEMVFE-MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           + E   + FE M  +G +P+ +  N+V+K+  +  +++ A  ++E M   G+ P   ++ 
Sbjct: 183 MAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFN 242

Query: 220 VMVVAYCKMGNVLEADK-WLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
            M+ +  K G++   DK WL  M  R       ++ ++I+ F + G    A R+      
Sbjct: 243 TMLDSCFKAGDLERVDKIWLE-MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRR 301

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
            G      +F  +IEG CK+G    A+ + +EM+  G  P   T+   I  LC  G  + 
Sbjct: 302 SGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDD 361

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A  L      S    P+V++Y  +++GY +  K   A +L   ++   + P+  TY TLI
Sbjct: 362 ARELL-----SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
           DG C++GN E A  L   M+ +   P++ TY  +V G  K G +  A ++  +    G++
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKM-AKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
            D   Y        +  D  +A  L  +M A     PD+  Y   I   C+   + ++  
Sbjct: 477 PDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE 536

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
           F  +  R G +P   TYT++I GY   G   MA   +  M      P  I Y  LI G  
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHA 596

Query: 578 KQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR--- 634
           K  +L++A      M ++G+ P  +T   L Y  CK  +   A   L ++E++       
Sbjct: 597 KAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKY 656

Query: 635 TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVT 670
           + T L+ K C   K       + ++LD +   +  T
Sbjct: 657 SYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692



 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 195/481 (40%), Gaps = 66/481 (13%)

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
           A R   +  + SD  +K +   F +M+E L +   + +A+ + E  +  G          
Sbjct: 102 AFRFFNWIQRQSD--VKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHE---IDDL 156

Query: 326 LIDG-----------------LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR 368
           LIDG                   KK   EK    F K++R +   P+V     ++    R
Sbjct: 157 LIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIR-KGFLPSVRNCNIVLK-VLR 214

Query: 369 DDKL-NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC 427
           D ++ N+A  +   M E G++P   T+ T++D   KAG+ ER   +   M R     +  
Sbjct: 215 DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEV 274

Query: 428 TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM 487
           TYN +++G  K G+++EA +   D   +G      ++N LI  +CKQ     A  +  +M
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334

Query: 488 AKSGI-------------------------------QPDIHSYTTLIAVFCREKRMSESE 516
             +GI                                PD+ SY TL+  + +  +  E+ 
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEAS 394

Query: 517 MFFEEAVRFGFI-PTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
           + F++ +R G I P+  TY ++I G C  GNL  A +    M+     PD I Y TL+ G
Sbjct: 395 LLFDD-LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 453

Query: 576 LCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSA------MVILDRLEK 629
             K   L  A  +YD M+ KG+ P      T A    ++ D   A      MV  D    
Sbjct: 454 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP 513

Query: 630 KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSD 689
            L I      +  LC    +  A  F  K+  +    + VT    +    E+ ++ +  +
Sbjct: 514 DLTIYNVR--IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 571

Query: 690 L 690
           L
Sbjct: 572 L 572



 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/376 (21%), Positives = 145/376 (38%), Gaps = 56/376 (14%)

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR--------------- 381
           E AFR F  + R  + K +   + AM+     +D ++ A ++  R               
Sbjct: 100 EIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLID 159

Query: 382 ----------------------------------MKEQGLIPNTNTYTTLIDGHCKAGNF 407
                                             M  +G +P+      ++     +   
Sbjct: 160 GSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMM 219

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
            +A  +   M   G  P + T+N ++D   K G ++   K+  +     +E  +VTYNIL
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           I+   K   +++A      M +SG     +S+  LI  +C++    ++    +E +  G 
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
            PT  TY   IC  C  G +  A +    M+     PD ++Y TL+ G  K  K  EA  
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASL 395

Query: 588 LYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW---IRTATTLVRKLC 644
           L+D +    + P  VT  TL    C+  +   A  + + +  +L    + T TTLV+   
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455

Query: 645 SERKVGMAALFFHKLL 660
               + MA   + ++L
Sbjct: 456 KNGNLSMATEVYDEML 471



 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 82/168 (48%), Gaps = 1/168 (0%)

Query: 145 HEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFE 204
           H     ++R + E G+ K A  +  EM  + + P+  T  +++    + G ++ A     
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYST 609

Query: 205 EMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKG 264
           EM  RGV P+  ++  ++   CK GN+ EA ++L  M + G   +  S+T++IS+ C+  
Sbjct: 610 EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFE 669

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
                ++ + +  D  ++P+     ++ + L K    ++  E LE ++
Sbjct: 670 KWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV-EFLERLL 716


>AT1G63230.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:23451144-23452201 FORWARD
           LENGTH=323
          Length = 323

 Score =  191 bits (484), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 175/315 (55%), Gaps = 5/315 (1%)

Query: 278 DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTE 337
           + G +P+++ FT+++ GLC  G + QA  +++ MV +G +P    +  +I+GLCK G TE
Sbjct: 3   ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTE 58

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
            A  L  K+  + + K +V+ Y A+I+  C+D     A+ L   M ++G+ P+  TY+ +
Sbjct: 59  SALNLLSKMEET-HIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           ID  C++G +  A  L+  M     +P++ T++A+++ L K+G+V EA ++  D    G+
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
               +TYN +I   CKQ  +  A  +   MA     PD+ +++TLI  +C+ KR+     
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
            F E  R G +    TYT++I G+C+ G+L  A    + M   G  P+ I + ++++ LC
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 578 KQSKLDEARGLYDSM 592
            + +L +A  + + +
Sbjct: 298 SKKELRKAFAILEDL 312



 Score =  171 bits (432), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 165/316 (52%), Gaps = 7/316 (2%)

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           +P+V+T+T ++NG C + ++ +A  L+ RM E+G  P    Y T+I+G CK G+ E A +
Sbjct: 7   RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           L++ M       ++  YNAI+D LCK G    A  +  +    G+  D +TY+ +I   C
Sbjct: 63  LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           +      A  L   M +  I PD+ +++ LI    +E ++SE+E  + + +R G  PT  
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           TY SMI G+C++  L  A +    M+   C PD + + TLI+G CK  ++D    ++  M
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242

Query: 593 IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR---TATTLVRKLCSERKV 649
             +G++   VT  TL + +C++ D  +A  +L+ +          T  +++  LCS++++
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302

Query: 650 GMAALFFHKLLDMDFH 665
             A      L   + H
Sbjct: 303 RKAFAILEDLQKSEGH 318



 Score =  168 bits (426), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 166/319 (52%), Gaps = 5/319 (1%)

Query: 311 MVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDD 370
           MV  G +P+V T T L++GLC +G   +A  L  ++V  E ++P    Y  +ING C+  
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVE-EGHQP----YGTIINGLCKMG 55

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
               A  LL +M+E  +  +   Y  +ID  CK G+   A +L   M  +G  P++ TY+
Sbjct: 56  DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            ++D  C+ GR  +A ++L+D     +  D VT++ LI+   K+  + +A  ++  M + 
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           GI P   +Y ++I  FC++ R+++++   +        P   T++++I GYC+   +   
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
           ++ F  M   G V +++ Y TLI G C+   LD A+ L + MI  G+ P  +T  ++   
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295

Query: 611 YCKIDDCCSAMVILDRLEK 629
            C   +   A  IL+ L+K
Sbjct: 296 LCSKKELRKAFAILEDLQK 314



 Score =  165 bits (417), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 159/293 (54%), Gaps = 5/293 (1%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           GR+ +A+ +V  M  +G  P    +N +    C+MG  + A  L  +M    +      Y
Sbjct: 24  GRVLQALALVDRMVEEGHQPYGTIINGL----CKMGDTESALNLLSKMEETHIKAHVVIY 79

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             ++   CK G+ + A    + M D+G   D  +++ +I  FC  G  T A +      +
Sbjct: 80  NAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
             + P+++ F+++I  L K G + +A E+  +M+ +G  P   T+ ++IDG CK+     
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLND 199

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A R+ L  + S++  P+V+T++ +INGYC+  +++    +   M  +G++ NT TYTTLI
Sbjct: 200 AKRM-LDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
            G C+ G+ + A DL+N+M   G +PN  T+ +++  LC K  +++A+ +L+D
Sbjct: 259 HGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILED 311



 Score =  146 bits (368), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 151/316 (47%), Gaps = 11/316 (3%)

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
           M E G  P+  T+TTL++G C  G   +A  L++ M  EG  P    Y  I++GLCK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 442 VQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTT 501
            + A  +L       ++A  V YN +I   CK      A  LF++M   GI PD+ +Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 502 LIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
           +I  FCR  R +++E    + +     P   T++++I    +EG ++ A + +  M   G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 562 CVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAM 621
             P +I Y ++I G CKQ +L++A+ + DSM  K   P  VT  TL   YCK     + M
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 622 VILDRLEKKLWIR---TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTAC 678
            I   + ++  +    T TTL+   C    +  A    + ++      N +T  + + + 
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 679 YESNK----YALVSDL 690
               +    +A++ DL
Sbjct: 297 CSKKELRKAFAILEDL 312



 Score =  135 bits (340), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 143/282 (50%), Gaps = 2/282 (0%)

Query: 141 LQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQ 200
           +++ H+    ++    ++G  + A+ ++ +M    +  +    N ++   C+ G   +AQ
Sbjct: 37  VEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQ 96

Query: 201 YLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEF 260
            LF EM  +G+ PD  +Y  M+ ++C+ G   +A++ L  M++R    D  +F+ +I+  
Sbjct: 97  NLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156

Query: 261 CEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNV 320
            ++G  + A   +      G+ P  I + SMI+G CK+  +  A  ML+ M  +   P+V
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDV 216

Query: 321 YTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG 380
            T + LI+G CK    +    +F ++ R      N +TYT +I+G+C+   L+ A+ LL 
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHR-RGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 275

Query: 381 RMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM-NLMSREG 421
            M   G+ PN  T+ +++   C      +AF ++ +L   EG
Sbjct: 276 VMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEG 317



 Score = 99.4 bits (246), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 101/202 (50%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+ SF   GR  +A +++ +M  + + P+  T + ++    + G V  A+ ++ +M  RG
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P + +Y  M+  +CK   + +A + L  M  +    D  +F+ +I+ +C+       +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F +    G+  N + +T++I G C+ G +  A ++L  M+  G  PN  T  +++  L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 331 CKKGWTEKAFRLFLKLVRSENN 352
           C K    KAF +   L +SE +
Sbjct: 297 CSKKELRKAFAILEDLQKSEGH 318


>AT5G08310.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:2672756-2675254 REVERSE
           LENGTH=832
          Length = 832

 Score =  189 bits (479), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 166/680 (24%), Positives = 288/680 (42%), Gaps = 75/680 (11%)

Query: 69  THMRVSPPRLHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLY 128
           T    SP    L I    L + + V TV  L G     +A  FF+WA     +R+ M  Y
Sbjct: 53  TRQPFSPDDPELLILSPEL-NTKVVETV--LNGFKRWGLAYLFFNWASKQEGYRNDMYAY 109

Query: 129 IVCATSL---------------IGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHN 173
              A+ L               + N     +       +R     G + EA  +   +  
Sbjct: 110 NAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVRE 169

Query: 174 QGM-VPNTQTLNLVMKIACEMGL--VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGN 230
            G+ VPN  T N +++   +     V+  +   +EM   G H D  +   ++  YC  G 
Sbjct: 170 MGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGK 229

Query: 231 VLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTS 290
              A    + +L RG+L ++ S  L++S FC+ G   +A        +  ++ N   +  
Sbjct: 230 SERALSVFNEILSRGWLDEHISTILVVS-FCKWGQVDKAFELIEMLEERDIRLNYKTYCV 288

Query: 291 MIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 350
           +I G  K   I +AF++ E+M   G   ++  +  LI GLCK    E A  L+L++ RS 
Sbjct: 289 LIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSG 348

Query: 351 --------------------------------NNKPNVLTYTAMINGYCRDDKLNRA--- 375
                                           + K  +L Y ++  G+ R+D ++ A   
Sbjct: 349 IPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSF 408

Query: 376 -EMLLGRMKEQG--------------LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE 420
            + L+G  +  G              ++P++++ + +I+   KA   + A  L++ + + 
Sbjct: 409 IQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQN 468

Query: 421 GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
           G  P    YN I++G+CK+GR +E+ K+L +    G+E  + T N +     ++ D   A
Sbjct: 469 GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGA 528

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
           L L  KM   G +P I   T L+   C   R  ++  + ++    GF+      T+ I G
Sbjct: 529 LDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDG 588

Query: 541 YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC 600
             +   +   ++ F  +  +G  PD IAY  LI  LCK  +  EA  L++ M+ KGL P 
Sbjct: 589 LIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPT 648

Query: 601 EVTRITLAYEYCK---IDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFH 657
             T  ++   +CK   ID   S +V +   EK   + T T+L+  LC+  +   A   ++
Sbjct: 649 VATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWN 708

Query: 658 KLLDMDFHVNRVTLAAFMTA 677
           ++   D + NR+T  A +  
Sbjct: 709 EMKGKDCYPNRITFMALIQG 728



 Score =  163 bits (413), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/546 (24%), Positives = 224/546 (41%), Gaps = 86/546 (15%)

Query: 170 EMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMG 229
           EM + G   +  TL  V+++ C  G  + A  +F E+ +RG   +  S  ++VV++CK G
Sbjct: 204 EMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWG 262

Query: 230 NVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFT 289
            V +A + + ++ +R   ++  ++ ++I  F ++    +A + F K   MG+  ++  + 
Sbjct: 263 QVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYD 322

Query: 290 SMIEGLC---------------KRGSIKQAFEMLEEMVCQ------------------GW 316
            +I GLC               KR  I     +L +++C                     
Sbjct: 323 VLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDK 382

Query: 317 KPNVYTHTALIDGLCKKGWTEKAFRLF---------------LKLVRSENNK--PNVLTY 359
           K  +  + +L +G  +     +A+                  +KL++  N    P+  + 
Sbjct: 383 KSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSL 442

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
           + +IN   + +K++ A  LL  + + GLIP    Y  +I+G CK G  E +  L+  M  
Sbjct: 443 SIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKD 502

Query: 420 EGFSPNICTYNAI-----------------------------------VDGLCKKGRVQE 444
            G  P+  T N I                                   V  LC+ GR  +
Sbjct: 503 AGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVD 562

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
           A K L D    G     V     I    K   + + L LF  +  +G  PD+ +Y  LI 
Sbjct: 563 ACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIK 622

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
             C+  R  E+++ F E V  G  PT  TY SMI G+C+EG +   +    RM +    P
Sbjct: 623 ALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNP 682

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVIL 624
           D I Y +LI GLC   +  EA   ++ M  K   P  +T + L    CK      A+V  
Sbjct: 683 DVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYF 742

Query: 625 DRLEKK 630
             +E+K
Sbjct: 743 REMEEK 748


>AT1G79080.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:29747102-29748832 REVERSE
           LENGTH=576
          Length = 576

 Score =  186 bits (473), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 215/456 (47%), Gaps = 4/456 (0%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           G  PN      ++   C+   +  A  + E M + G+ PD+++Y  +V   CK GNV  A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
            + +  M D G+  +  ++  ++   C  G   ++L++  +    GL PN   ++ ++E 
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
             K     +A ++L+E++ +G +PN+ ++  L+ G CK+G T+ A  LF +L  ++  K 
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL-PAKGFKA 279

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           NV++Y  ++   C D +   A  LL  M      P+  TY  LI+     G  E+A  ++
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVL 339

Query: 415 NLMSR--EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
             MS+    F     +YN ++  LCK+G+V    K L +  +   + ++ TYN + S   
Sbjct: 340 KEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCE 399

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
             + +++A  +   ++          Y ++I   CR+     +     E  R GF P   
Sbjct: 400 HNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAH 459

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSD-HGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
           TY+++I G C EG  T A++    M +   C P    +  +I GLCK  + D A  +++ 
Sbjct: 460 TYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEM 519

Query: 592 MIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
           M+EK  +P E T   L       D+   A  +LD L
Sbjct: 520 MVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555



 Score =  159 bits (402), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 224/483 (46%), Gaps = 12/483 (2%)

Query: 134 SLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM 193
           SL+  G+        Q ++    +  RLK+A+ ++  M + G++P+      ++   C+ 
Sbjct: 96  SLVTGGHKPNVAHSTQ-LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKR 154

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF 253
           G V YA  L E+M   G   ++ +Y  +V   C +G++ ++ +++  ++ +G   +  ++
Sbjct: 155 GNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTY 214

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
           + ++    ++     A++   +    G +PNL+++  ++ G CK G    A  +  E+  
Sbjct: 215 SFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPA 274

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
           +G+K NV ++  L+  LC  G  E+A  L  ++    +  P+V+TY  +IN      +  
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEM-DGGDRAPSVVTYNILINSLAFHGRTE 333

Query: 374 RAEMLLGRMKE--QGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
           +A  +L  M +          +Y  +I   CK G  +     ++ M      PN  TYNA
Sbjct: 334 QALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA 393

Query: 432 IVDGLCK-KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
           I   LC+   +VQEA+ +++   +         Y  +I+  C++ +   A  L  +M + 
Sbjct: 394 I-GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRC 452

Query: 491 GIQPDIHSYTTLIAVFCREKRMS---ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNL 547
           G  PD H+Y+ LI   C E   +   E     EE+      PT   + +MI G C+    
Sbjct: 453 GFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCK--PTVDNFNAMILGLCKIRRT 510

Query: 548 TMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM-IEKGLIPCEVTRIT 606
            +A++ F  M +   +P+   Y  L+ G+  + +L+ A+ + D + + K +    V RI 
Sbjct: 511 DLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIV 570

Query: 607 LAY 609
           + +
Sbjct: 571 MQF 573



 Score =  144 bits (362), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 157/324 (48%), Gaps = 3/324 (0%)

Query: 282 KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFR 341
           KP+L + +   +      ++  +F  LE +V  G KPNV   T L+  LCK    +KA R
Sbjct: 68  KPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIR 127

Query: 342 LFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGH 401
           + ++L+ S    P+   YT ++N  C+   +  A  L+ +M++ G   NT TY  L+ G 
Sbjct: 128 V-IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGL 186

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
           C  G+  ++   +  + ++G +PN  TY+ +++   K+    EA K+L +    G E + 
Sbjct: 187 CMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNL 246

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
           V+YN+L++  CK+     A+ALF ++   G + ++ SY  L+   C + R  E+     E
Sbjct: 247 VSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAE 306

Query: 522 AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS--DHGCVPDSIAYGTLISGLCKQ 579
                  P+  TY  +I      G    A++    MS  +H     + +Y  +I+ LCK+
Sbjct: 307 MDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKE 366

Query: 580 SKLDEARGLYDSMIEKGLIPCEVT 603
            K+D      D MI +   P E T
Sbjct: 367 GKVDLVVKCLDEMIYRRCKPNEGT 390



 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 1/270 (0%)

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
           WKP++ + +   D    +     +F     LV +  +KPNV   T ++   C+ ++L +A
Sbjct: 67  WKPDLDSGSFSDDPRSDEPNLSDSFSHLESLV-TGGHKPNVAHSTQLLYDLCKANRLKKA 125

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
             ++  M   G+IP+ + YT L++  CK GN   A  L+  M   G+  N  TYNA+V G
Sbjct: 126 IRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRG 185

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
           LC  G + ++ + ++     GL  +  TY+ L+    K+    +A+ L  ++   G +P+
Sbjct: 186 LCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPN 245

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
           + SY  L+  FC+E R  ++   F E    GF     +Y  ++   C +G    A     
Sbjct: 246 LVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLA 305

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
            M      P  + Y  LI+ L    + ++A
Sbjct: 306 EMDGGDRAPSVVTYNILINSLAFHGRTEQA 335



 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 3/181 (1%)

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           L+ + CK   +K+A+ +   M  SGI PD  +YT L+   C+   +  +    E+    G
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
           +     TY +++ G C  G+L  +++F  R+   G  P++  Y  L+    K+   DEA 
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231

Query: 587 GLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW---IRTATTLVRKL 643
            L D +I KG  P  V+   L   +CK      AM +   L  K +   + +   L+R L
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291

Query: 644 C 644
           C
Sbjct: 292 C 292


>AT5G04810.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr5:1390049-1393760 FORWARD LENGTH=952
          Length = 952

 Score =  185 bits (469), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 220/466 (47%), Gaps = 17/466 (3%)

Query: 161 LKEAVEMVFEMHNQGM-----VPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDS 215
           ++ A  +V EM  +G+     + +T      M    + GLV     +F+ +   G  P  
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV-----VFKRLKECGFTPTV 484

Query: 216 ASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHK 275
            +Y  ++  Y K+G + +A +   VM + G   +  +++++I+ F +      A   F  
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544

Query: 276 FSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGW 335
               G+KP++I + ++I   C  G++ +A + ++EM     +P   T   +I G  K G 
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604

Query: 336 TEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYT 395
             ++  +F  ++R     P V T+  +ING     ++ +A  +L  M   G+  N +TYT
Sbjct: 605 MRRSLEVF-DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663

Query: 396 TLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN 455
            ++ G+   G+  +AF+    +  EG   +I TY A++   CK GR+Q A  + K+    
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723

Query: 456 GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES 515
            +  +   YNILI    ++ D+ +A  L  +M K G++PDIH+YT+ I+   +   M+ +
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783

Query: 516 EMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
               EE    G  P  +TYT++I G+ R      A+  +  M   G  PD   Y  L++ 
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843

Query: 576 LCKQSKLDEA------RGLYDSMIEKGLIPCEVTRITLAYEYCKID 615
           L  ++ + EA        +   M+E GLI    T +  +   CKI+
Sbjct: 844 LLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIE 889



 Score =  170 bits (431), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 230/470 (48%), Gaps = 19/470 (4%)

Query: 147 VMQCMVRSFAEIGR-LKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEE 205
           +   ++ ++A +GR + EA+  V +M  +G+  +  T ++++    + G  + A Y F+E
Sbjct: 346 IYTSLIHAYA-VGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE 404

Query: 206 MSARGVHP--DSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEK 263
             A+ +H   +++ Y  ++ A+C+  N+  A+  +  M + G     A +  ++  +   
Sbjct: 405 --AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMV 462

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
               + L  F +  + G  P ++ +  +I    K G I +A E+   M  +G K N+ T+
Sbjct: 463 ADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTY 522

Query: 324 TALIDGLCK-KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
           + +I+G  K K W   AF +F  +V+ E  KP+V+ Y  +I+ +C    ++RA   +  M
Sbjct: 523 SMMINGFVKLKDWA-NAFAVFEDMVK-EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           ++    P T T+  +I G+ K+G+  R+ ++ ++M R G  P + T+N +++GL +K ++
Sbjct: 581 QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 640

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           ++A ++L +    G+ A++ TY  ++  +    D  +A   F+++   G+  DI +Y  L
Sbjct: 641 EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEAL 700

Query: 503 IAVFCREKRMSES-----EMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
           +   C+  RM  +     EM      R  F+     Y  +I G+ R G++  A     +M
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFV-----YNILIDGWARRGDVWEAADLIQQM 755

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
              G  PD   Y + IS   K   ++ A    + M   G+ P   T  TL
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805



 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/453 (23%), Positives = 209/453 (46%), Gaps = 1/453 (0%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
           P+     L++K     G +  A+  FE M ARG+ P S  Y  ++ AY    ++ EA   
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366

Query: 238 LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCK 297
           +  M + G  +   ++++I+  F + G A  A  +F +   +    N   +  +I   C+
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426

Query: 298 RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
             ++++A  ++ EM  +G    +  +  ++DG       +K   +F +L +     P V+
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL-KECGFTPTVV 485

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           TY  +IN Y +  K+++A  +   MKE+G+  N  TY+ +I+G  K  ++  AF +   M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
            +EG  P++  YN I+   C  G +  A + +K+           T+  +I  + K  D+
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
           +++L +F  M + G  P +H++  LI     +++M ++    +E    G    + TYT +
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
           + GY   G+   A ++F R+ + G   D   Y  L+   CK  ++  A  +   M  + +
Sbjct: 666 MQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI 725

Query: 598 IPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
                    L   + +  D   A  ++ +++K+
Sbjct: 726 PRNSFVYNILIDGWARRGDVWEAADLIQQMKKE 758



 Score =  155 bits (391), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 188/399 (47%), Gaps = 3/399 (0%)

Query: 234 ADKWLSVM--LDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSM 291
            D W +V+   ++        F L++  +  +G   RA   F +    G+ P    +TS+
Sbjct: 291 GDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 350

Query: 292 IEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSEN 351
           I        + +A   + +M  +G + ++ T++ ++ G  K G  E A   F +  R  +
Sbjct: 351 IHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI-H 409

Query: 352 NKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAF 411
              N   Y  +I  +C+   + RAE L+  M+E+G+      Y T++DG+    + ++  
Sbjct: 410 KTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGL 469

Query: 412 DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEH 471
            +   +   GF+P + TY  +++   K G++ +A ++ +     G++ +  TY+++I+  
Sbjct: 470 VVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529

Query: 472 CKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTK 531
            K  D   A A+F  M K G++PD+  Y  +I+ FC    M  +    +E  +    PT 
Sbjct: 530 VKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTT 589

Query: 532 RTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
           RT+  +I GY + G++  +++ F  M   GCVP    +  LI+GL ++ ++++A  + D 
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 649

Query: 592 MIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           M   G+   E T   +   Y  + D   A     RL+ +
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688



 Score =  145 bits (365), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 172/388 (44%), Gaps = 1/388 (0%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           +   M+  +  +   K+ + +   +   G  P   T   ++ +  ++G +  A  +   M
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
              GV  +  +Y +M+  + K+ +   A      M+  G   D   +  IIS FC  G  
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
            RA++   +   +  +P    F  +I G  K G ++++ E+ + M   G  P V+T   L
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           I+GL +K   EKA  +  ++  +     N  TYT ++ GY       +A     R++ +G
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLA-GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           L  +  TY  L+   CK+G  + A  +   MS      N   YN ++DG  ++G V EA 
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
            +++     G++ D  TY   IS   K  D+ +A     +M   G++P+I +YTTLI  +
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809

Query: 507 CREKRMSESEMFFEEAVRFGFIPTKRTY 534
            R     ++   +EE    G  P K  Y
Sbjct: 810 ARASLPEKALSCYEEMKAMGIKPDKAVY 837



 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 150/328 (45%), Gaps = 24/328 (7%)

Query: 114 WAIGYSRFRHFMR--------LYIVCATSLIGNGNLQKAHEVMQCM-------------- 151
           WA  ++ F   ++        LY    ++  G GN+ +A + ++ M              
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594

Query: 152 -VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
            +  +A+ G ++ ++E+   M   G VP   T N ++    E   ++ A  + +EM+  G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V  +  +Y  ++  Y  +G+  +A ++ + + + G  VD  ++  ++   C+ G    AL
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               + S   +  N   +  +I+G  +RG + +A +++++M  +G KP+++T+T+ I   
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K G   +A +  ++ + +   KPN+ TYT +I G+ R     +A      MK  G+ P+
Sbjct: 775 SKAGDMNRATQT-IEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMS 418
              Y  L+       +   A+    +M+
Sbjct: 834 KAVYHCLLTSLLSRASIAEAYIYSGVMT 861



 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 22/295 (7%)

Query: 120 RFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVR---------------SFAEIGRLKEA 164
           R R   R ++        +G+++++ EV   M R                  E  ++++A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643

Query: 165 VEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVA 224
           VE++ EM   G+  N  T   +M+    +G    A   F  +   G+  D  +Y  ++ A
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703

Query: 225 YCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPN 284
            CK G +  A      M  R    ++  + ++I  +  +G    A     +    G+KP+
Sbjct: 704 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763

Query: 285 LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 344
           +  +TS I    K G + +A + +EEM   G KPN+ T+T LI G  +    EKA   + 
Sbjct: 764 IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYE 823

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG------RMKEQGLIPNTNT 393
           ++ ++   KP+   Y  ++        +  A +  G       M E GLI +  T
Sbjct: 824 EM-KAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT 877


>AT2G26790.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:11425270-11427669 REVERSE
           LENGTH=799
          Length = 799

 Score =  182 bits (463), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 231/504 (45%), Gaps = 21/504 (4%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V+  +VR F    ++K A  ++ EM   G   +      V+   C+   +  A    ++M
Sbjct: 285 VLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKM 344

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
             +G+  +     +++  YCKM   LEA +      D    +D   + +      + G  
Sbjct: 345 LGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRV 404

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             A     +  D G+ P++IN+T++I+G C +G +  A ++++EM+  G  P++ T+  L
Sbjct: 405 EEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVL 464

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           + GL + G  E+   ++ ++ ++E  KPN +T + +I G C   K+  AE     + EQ 
Sbjct: 465 VSGLARNGHEEEVLEIYERM-KAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL-EQK 522

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
              N  ++   + G+C+AG  ++A+       R  +      Y  +   LC +G +++A+
Sbjct: 523 CPENKASF---VKGYCEAGLSKKAY---KAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAH 576

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
            +LK      +E  +     +I   CK  ++++A  LF  M + G+ PD+ +YT +I  +
Sbjct: 577 DVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTY 636

Query: 507 CREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCR-------------EGNLTMAIKF 553
           CR   + ++E  FE+  + G  P   TYT ++  Y +             E     A + 
Sbjct: 637 CRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEV 696

Query: 554 FHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
               S  G   D + Y  LI   CK + L++A  L+D MI+ GL P  V   TL   Y +
Sbjct: 697 LREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFR 756

Query: 614 IDDCCSAMVILDRLEKKLWIRTAT 637
                 A+ ++  L KK  I + +
Sbjct: 757 KGYIDMAVTLVTELSKKYNIPSES 780



 Score =  166 bits (421), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 238/516 (46%), Gaps = 40/516 (7%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   +V+++  +G   EA +++F+      V + +  N +M    E G +     LF+++
Sbjct: 148 VSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQL 207

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEA--------------------------DKWLSV 240
              G+  +  +Y ++V A C+ GN+ EA                          +K +++
Sbjct: 208 KQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKAVAL 267

Query: 241 ML---DRGFLVDN---ASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
           +L   DR +L  +   A   +++  FC +     A     +  ++G   ++    ++I+ 
Sbjct: 268 ILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDR 327

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
            CK  ++ +A   L++M+ +G K N    + ++   CK     +A   F K  R  N   
Sbjct: 328 YCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKF-KEFRDMNIFL 386

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           + + Y    +   +  ++  A  LL  MK++G++P+   YTTLIDG+C  G    A DL+
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
           + M   G SP++ TYN +V GL + G  +E  ++ +     G + + VT +++I   C  
Sbjct: 447 DEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFA 506

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
             +K+A   FS +     Q    +  + +  +C E  +S+    ++  VR  +   K  Y
Sbjct: 507 RKVKEAEDFFSSLE----QKCPENKASFVKGYC-EAGLSKKA--YKAFVRLEYPLRKSVY 559

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
             +    C EG L  A     +MS +   P     G +I   CK + + EA+ L+D+M+E
Sbjct: 560 IKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVE 619

Query: 595 KGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           +GLIP   T   + + YC++++   A  + + ++++
Sbjct: 620 RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655



 Score =  148 bits (373), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 190/428 (44%), Gaps = 12/428 (2%)

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           +V AY  +G   EA   L        +VD  +   +++   E G     +  F +   +G
Sbjct: 152 LVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLG 211

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF 340
           L  N   +  +++ LC++G++++A  +L E        +V+ +   I+GLC  G TEKA 
Sbjct: 212 LCANEYTYAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLCVTGETEKAV 265

Query: 341 RLFLKLVRSENNKPNVL--TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
            L L+L+  +    + L      ++ G+C + K+  AE ++  M+E G   +      +I
Sbjct: 266 ALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVI 325

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
           D +CK  N   A   ++ M  +G   N    + I+   CK     EA +  K+     + 
Sbjct: 326 DRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIF 385

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            D+V YN+      K   +++A  L  +M   GI PD+ +YTTLI  +C + ++ ++   
Sbjct: 386 LDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDL 445

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
            +E +  G  P   TY  ++ G  R G+    ++ + RM   G  P+++    +I GLC 
Sbjct: 446 IDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCF 505

Query: 579 QSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT 638
             K+ EA   + S+ +K    C   + +    YC+      A     RLE  L       
Sbjct: 506 ARKVKEAEDFFSSLEQK----CPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIK 561

Query: 639 LVRKLCSE 646
           L   LC E
Sbjct: 562 LFFSLCIE 569



 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 39/252 (15%)

Query: 117 GYSRFRHFMR--LYIVCATSLIGNGNLQKAHEVMQ-------------C--MVRSFAEIG 159
            + R  + +R  +YI    SL   G L+KAH+V++             C  M+ +F ++ 
Sbjct: 546 AFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLN 605

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
            ++EA  +   M  +G++P+  T  +++   C +  +  A+ LFE+M  RG+ PD  +Y 
Sbjct: 606 NVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYT 665

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           V++  Y K+    E  +  SV  + G                 K  A+  LR   +FS  
Sbjct: 666 VLLDRYLKLDP--EHHETCSVQGEVG-----------------KRKASEVLR---EFSAA 703

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+  +++ +T +I+  CK  +++QA E+ + M+  G +P++  +T LI    +KG+ + A
Sbjct: 704 GIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMA 763

Query: 340 FRLFLKLVRSEN 351
             L  +L +  N
Sbjct: 764 VTLVTELSKKYN 775



 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 131/319 (41%), Gaps = 60/319 (18%)

Query: 142 QKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIA-CEMGLVDYAQ 200
           QK  E     V+ + E G  K+A +    +      P  +++ + +  + C  G ++ A 
Sbjct: 521 QKCPENKASFVKGYCEAGLSKKAYKAFVRLE----YPLRKSVYIKLFFSLCIEGYLEKAH 576

Query: 201 YLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEF 260
            + ++MSA  V P  +    M+ A+CK+ NV EA      M++R                
Sbjct: 577 DVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER---------------- 620

Query: 261 CEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNV 320
                              GL P+L  +T MI   C+   +++A  + E+M  +G KP+V
Sbjct: 621 -------------------GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDV 661

Query: 321 YTHTALID----------------GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN 364
            T+T L+D                G   K    +  R F     +     +V+ YT +I+
Sbjct: 662 VTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREF----SAAGIGLDVVCYTVLID 717

Query: 365 GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP 424
             C+ + L +A  L  RM + GL P+   YTTLI  + + G  + A  L+  +S++   P
Sbjct: 718 RQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIP 777

Query: 425 NICTYNAIVDGLCKKGRVQ 443
           +     A+     K  R Q
Sbjct: 778 SESFEAAVKSAALKAKRFQ 796



 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 122/332 (36%), Gaps = 63/332 (18%)

Query: 368 RDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAG--------------NFERAFDL 413
           RDD  N A   L ++KE G+ PN N Y TL+      G              N ER F +
Sbjct: 67  RDDP-NLALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTV 125

Query: 414 MNLMSREGFSPN--------ICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYN 465
           M+L+   G            I    A+V      G   EA  +L          D    N
Sbjct: 126 MDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACN 185

Query: 466 ILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF------ 519
            L++   +   I   + LF ++ + G+  + ++Y  ++   CR+  + E+ M        
Sbjct: 186 FLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESV 245

Query: 520 ----------------EEAVRFGFIPTKRTYTS----------MICGYCREGNLTMAIKF 553
                           E+AV        R Y +          ++ G+C E  +  A   
Sbjct: 246 FGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESV 305

Query: 554 FHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL-IPCEVTRITLAYEYC 612
              M + G   D  A   +I   CK   L EA G  D M+ KGL + C +  + L   YC
Sbjct: 306 IIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQC-YC 364

Query: 613 KIDDCCSAMVILDRLEKKLWIRTATTLVRKLC 644
           K+D C      L+ LEK    R     + ++C
Sbjct: 365 KMDMC------LEALEKFKEFRDMNIFLDRVC 390


>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
           protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
          Length = 659

 Score =  182 bits (463), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/576 (22%), Positives = 252/576 (43%), Gaps = 90/576 (15%)

Query: 80  LSIDPDSLTHEQAVTT---VASLAGNAGSMVALSFFHWA----------------IGYSR 120
           L ++ +  TH   + T   ++ L      + +L F+ W                 +G + 
Sbjct: 61  LILNQEFTTHRIGLNTRFVISVLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNAL 120

Query: 121 FRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNT 180
           FR    L  +     I +   + + E+M  ++ S+  +G  K   ++  ++   GM P+T
Sbjct: 121 FRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPST 180

Query: 181 QTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSV 240
           +  N V+    +   +D A   F++M + G  PD  +Y +++   CK G V EA + +  
Sbjct: 181 RLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQ 240

Query: 241 MLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL----- 295
           M   G   +  ++T++I  F   G    AL+         L PN     + + G+     
Sbjct: 241 MEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLP 300

Query: 296 -CKRGSI-----------------------------KQAFEMLEEMVCQGWKPNVYTHTA 325
            CK   +                             K+  + L ++  +G+ P+  T  A
Sbjct: 301 PCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNA 360

Query: 326 ----------------LIDGLCKKGWTEKAFRLFLKLVR--------SENNK-------- 353
                           + DG   +G  +  F  +L LV+        SE ++        
Sbjct: 361 AMSCLLKGHDLVETCRIFDGFVSRG-VKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVD 419

Query: 354 ---PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA 410
               +V +Y A+I+  C+  ++  A M L  M+++G+ PN  T+ T + G+   G+ ++ 
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479

Query: 411 FDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISE 470
             ++  +   GF P++ T++ I++ LC+   +++A+   K+    G+E +++TYNILI  
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRS 539

Query: 471 HCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPT 530
            C   D  +++ LF+KM ++G+ PD+++Y   I  FC+ +++ ++E   +  +R G  P 
Sbjct: 540 CCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPD 599

Query: 531 KRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS 566
             TY+++I      G  + A + F  +  HGCVPDS
Sbjct: 600 NFTYSTLIKALSESGRESEAREMFSSIERHGCVPDS 635



 Score =  164 bits (414), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 234/522 (44%), Gaps = 45/522 (8%)

Query: 214 DSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYF 273
           D +   V+  A  + G +L + + L  + D G+ + +    ++I  +   G A      F
Sbjct: 109 DQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVF 168

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
            + S +G+KP+   + ++I+ L K  S+  A+   ++M   G KP+ +T+  LI G+CKK
Sbjct: 169 AQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKK 228

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
           G  ++A RL +K +  E N+PNV TYT +I+G+    +++ A   L  M+ + L PN  T
Sbjct: 229 GVVDEAIRL-VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEAT 287

Query: 394 YTTLIDG------HCKA-----------GNFER-AFDLM------NLMSRE--------- 420
             T + G       CKA            N +R  +D +      N M++E         
Sbjct: 288 IRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIG 347

Query: 421 --GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF-HNGLEADKVTYNILISEHCKQADI 477
             G+ P+  T+NA +  L K   + E  ++  DGF   G++     Y +L+         
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLVETCRIF-DGFVSRGVKPGFNGYLVLVQALLNAQRF 406

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
            +      +M   G+   ++SY  +I   C+ +R+  + MF  E    G  P   T+ + 
Sbjct: 407 SEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTF 466

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
           + GY   G++        ++  HG  PD I +  +I+ LC+  ++ +A   +  M+E G+
Sbjct: 467 LSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI 526

Query: 598 IPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK-----LWIRTATTLVRKLCSERKVGMA 652
            P E+T   L    C   D   ++ +  ++++      L+   AT  ++  C  RKV  A
Sbjct: 527 EPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNAT--IQSFCKMRKVKKA 584

Query: 653 ALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSARI 694
                 +L +    +  T +  + A  ES + +   ++ + I
Sbjct: 585 EELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSI 626



 Score =  141 bits (355), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 146/304 (48%), Gaps = 5/304 (1%)

Query: 162 KEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQY--LFEEMSARGVHPDSASYR 219
           KE  + + ++  +G +P++ T N  M  +C +   D  +   +F+   +RGV P    Y 
Sbjct: 337 KETGQFLRKIGERGYIPDSSTFNAAM--SCLLKGHDLVETCRIFDGFVSRGVKPGFNGYL 394

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           V+V A        E D++L  M   G L    S+  +I   C+      A  +  +  D 
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+ PNL+ F + + G   RG +K+   +LE+++  G+KP+V T + +I+ LC+    + A
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           F  F +++     +PN +TY  +I   C     +R+  L  +MKE GL P+   Y   I 
Sbjct: 515 FDCFKEML-EWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQ 573

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
             CK    ++A +L+  M R G  P+  TY+ ++  L + GR  EA +M      +G   
Sbjct: 574 SFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633

Query: 460 DKVT 463
           D  T
Sbjct: 634 DSYT 637


>AT5G02860.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:654102-656561 FORWARD
           LENGTH=819
          Length = 819

 Score =  182 bits (462), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/594 (22%), Positives = 263/594 (44%), Gaps = 79/594 (13%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLV-DYAQYLFEEMSAR 209
           ++ +FA  GR +EAV +  +M   G  P   T N+++ +  +MG   +    L E+M + 
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273

Query: 210 GVHPDSASYRVMVVAYCKMGNV-LEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
           G+ PD+ +Y  ++   CK G++  EA +    M   GF  D  ++  ++  + +      
Sbjct: 274 GIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A++  ++    G  P+++ + S+I    + G + +A E+  +M  +G KP+V+T+T L+ 
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL---------------- 372
           G  + G  E A  +F ++ R+   KPN+ T+ A I  Y    K                 
Sbjct: 393 GFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451

Query: 373 -------------------NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
                              +    +   MK  G +P   T+ TLI  + + G+FE+A  +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML---KDG---------------FHN 455
              M   G +P++ TYN ++  L + G  +++ K+L   +DG               + N
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571

Query: 456 GLE-------ADKVTYNILISEH----------CKQADI-KQALALFSKMAKSGIQPDIH 497
           G E       A++V Y+ +I             C + D+  +A   FS++ + G  PDI 
Sbjct: 572 GKEIGLMHSLAEEV-YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630

Query: 498 SYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
           +  ++++++ R + ++++    +     GF P+  TY S++  + R  +   + +    +
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDC 617
              G  PD I+Y T+I   C+ +++ +A  ++  M   G++P  +T  T    Y      
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750

Query: 618 CSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNR 668
             A+ ++  + K   +    T  ++V   C   +   A LF   L ++D H  +
Sbjct: 751 EEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPK 804



 Score =  177 bits (450), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 196/400 (49%), Gaps = 2/400 (0%)

Query: 214 DSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYF 273
           D++   +++    K G V  A    + + + GF +D  S+T +IS F   G    A+  F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSI-KQAFEMLEEMVCQGWKPNVYTHTALIDGLCK 332
            K  + G KP LI +  ++    K G+   +   ++E+M   G  P+ YT+  LI   CK
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCK 290

Query: 333 KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
           +G   +      + +++     + +TY A+++ Y +  +   A  +L  M   G  P+  
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG 452
           TY +LI  + + G  + A +L N M+ +G  P++ TY  ++ G  + G+V+ A  + ++ 
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
            + G + +  T+N  I  +  +    + + +F ++   G+ PDI ++ TL+AVF +    
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
           SE    F+E  R GF+P + T+ ++I  Y R G+   A+  + RM D G  PD   Y T+
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYC 612
           ++ L +    +++  +   M +    P E+T  +L + Y 
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570



 Score =  159 bits (401), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 4/365 (1%)

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHT 324
            A RA  +F K  D     +      +I  L K G +  A  M   +   G+  +VY++T
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR-DDKLNRAEMLLGRMK 383
           +LI      G   +A  +F K+   +  KP ++TY  ++N + +     N+   L+ +MK
Sbjct: 213 SLISAFANSGRYREAVNVFKKM-EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNF-ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
             G+ P+  TY TLI   CK G+  + A  +   M   GFS +  TYNA++D   K  R 
Sbjct: 272 SDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           +EA K+L +   NG     VTYN LIS + +   + +A+ L ++MA+ G +PD+ +YTTL
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGC 562
           ++ F R  ++  +   FEE    G  P   T+ + I  Y   G  T  +K F  ++  G 
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMV 622
            PD + + TL++   +     E  G++  M   G +P   T  TL   Y +      AM 
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510

Query: 623 ILDRL 627
           +  R+
Sbjct: 511 VYRRM 515


>AT2G17525.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:7624178-7626058 FORWARD
           LENGTH=626
          Length = 626

 Score =  182 bits (461), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 225/528 (42%), Gaps = 50/528 (9%)

Query: 110 SFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVF 169
           + FH    + RF    +L      S+     L     +   ++R F     +K  + +V 
Sbjct: 81  ALFHKLCVFRRFDTVYQLLDEMPDSI----GLPPDDAIFVTIIRGFGRARLIKRVISVVD 136

Query: 170 EMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMG 229
            +   G+ P+ +  N ++ +  +  +    ++   +M A G+H D  +Y +++       
Sbjct: 137 LVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTN 196

Query: 230 NVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFT 289
            + +  K L +M   G   +   +  ++   C+ G   RA     +  +    PN + F 
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFN 252

Query: 290 SMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
            +I   C    + Q+  +LE+    G+ P+V T T +++ LC +G   +A  + L+ V S
Sbjct: 253 ILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV-LERVES 311

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
           +  K +V+    ++ GYC   K+  A+     M+ +G +PN  TY  LI G+C  G  + 
Sbjct: 312 KGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDS 371

Query: 410 AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK-----DGFHNGLEADKVTY 464
           A D  N M  +    N  T+N ++ GL   GR  +  K+L+     D  H G   D   Y
Sbjct: 372 ALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVH-GARIDP--Y 428

Query: 465 NILISEHCKQADIKQALALFSKMAK---------------------------------SG 491
           N +I    K+   + AL    KM K                                  G
Sbjct: 429 NCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEG 488

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
             P I     LI  + +  ++ ES     + V  G++P   T+ ++I G+C++  +   I
Sbjct: 489 GVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGI 548

Query: 552 KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           KF   M++ GCVPD+ +Y  L+  LC +  + +A  L+  M+EK ++P
Sbjct: 549 KFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVP 596



 Score =  144 bits (364), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 184/395 (46%), Gaps = 22/395 (5%)

Query: 134 SLIGNGNLQKAHEVMQCM-----------VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQT 182
           +L  NG + +A  +M  M           + ++    +L +++ ++ +  + G VP+  T
Sbjct: 226 ALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVT 285

Query: 183 LNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVML 242
           +  VM++ C  G V  A  + E + ++G   D  +   +V  YC +G +  A ++   M 
Sbjct: 286 VTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEME 345

Query: 243 DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIK 302
            +G+L +  ++ L+I+ +C+ G    AL  F+      ++ N   F ++I GL   G   
Sbjct: 346 RKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTD 405

Query: 303 QAFEMLEEM----VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
              ++LE M       G + + Y    +I G  K+   E A    LK+   E   P  + 
Sbjct: 406 DGLKILEMMQDSDTVHGARIDPYN--CVIYGFYKENRWEDALEFLLKM---EKLFPRAVD 460

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
            +  +   C    ++  +    +M  +G +P+      LI  + + G  E + +L+N M 
Sbjct: 461 RSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
             G+ P   T+NA++ G CK+ +V    K ++D    G   D  +YN L+ E C + DI+
Sbjct: 521 TRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQ 580

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
           +A  LFS+M +  I PD   +++L+  FC  ++ +
Sbjct: 581 KAWLLFSRMVEKSIVPDPSMWSSLM--FCLSQKTA 613



 Score =  130 bits (328), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 165/362 (45%), Gaps = 8/362 (2%)

Query: 232 LEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD-MGLKPNLINFTS 290
           LE  +W S     GF+   +++  +  + C         +   +  D +GL P+   F +
Sbjct: 60  LETFRWASTF--PGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVT 117

Query: 291 MIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 350
           +I G  +   IK+   +++ +   G KP++    +++D L K+   + A   F + + + 
Sbjct: 118 IIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED-IDIAREFFTRKMMAS 176

Query: 351 NNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA 410
               +V TY  ++ G    +++     LL  MK  G+ PN   Y TL+   CK G   RA
Sbjct: 177 GIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRA 236

Query: 411 FDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISE 470
             LM+ M      PN  T+N ++   C + ++ ++  +L+  F  G   D VT   ++  
Sbjct: 237 RSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEV 292

Query: 471 HCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPT 530
            C +  + +AL +  ++   G + D+ +  TL+  +C   +M  ++ FF E  R G++P 
Sbjct: 293 LCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPN 352

Query: 531 KRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD 590
             TY  +I GYC  G L  A+  F+ M       +   + TLI GL    + D+   + +
Sbjct: 353 VETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILE 412

Query: 591 SM 592
            M
Sbjct: 413 MM 414



 Score =  130 bits (326), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/425 (21%), Positives = 179/425 (42%), Gaps = 44/425 (10%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +++  +   R+ +  +++  M   G+ PN    N ++   C+ G V  A+ L  EM    
Sbjct: 188 LMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK--- 244

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P+  ++ +++ AYC    ++++   L      GF+ D  + T ++   C +G  + AL
Sbjct: 245 -EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEAL 303

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +    G K +++   ++++G C  G ++ A     EM  +G+ PNV T+  LI G 
Sbjct: 304 EVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGY 363

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYC----RDDKLNRAEMLLGRMKEQG 386
           C  G  + A   F  + +++  + N  T+  +I G       DD L   EM+       G
Sbjct: 364 CDVGMLDSALDTFNDM-KTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHG 422

Query: 387 LIPNTNTYTTLIDGHCKAGNFE------------------RAFDLMNL------------ 416
                + Y  +I G  K   +E                  R+F L++L            
Sbjct: 423 --ARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTA 480

Query: 417 ---MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
              M  EG  P+I   + ++    + G+++E+ +++ D    G      T+N +I   CK
Sbjct: 481 YDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCK 540

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
           Q  +   +     MA+ G  PD  SY  L+   C +  + ++ + F   V    +P    
Sbjct: 541 QDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSM 600

Query: 534 YTSMI 538
           ++S++
Sbjct: 601 WSSLM 605



 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 153/326 (46%), Gaps = 9/326 (2%)

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
           T+ AL   LC     +  ++L  ++  S    P+   +  +I G+ R   + R   ++  
Sbjct: 78  TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAG-NFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
           + + G+ P+   + +++D   K   +  R F    +M+  G   ++ TY  ++ GL    
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMA-SGIHGDVYTYGILMKGLSLTN 196

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
           R+ + +K+L+    +G+  + V YN L+   CK   + +A +L S+M     +P+  ++ 
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFN 252

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
            LI+ +C E+++ +S +  E+    GF+P   T T ++   C EG ++ A++   R+   
Sbjct: 253 ILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESK 312

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSA 620
           G   D +A  TL+ G C   K+  A+  +  M  KG +P   T   L   YC +    SA
Sbjct: 313 GGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSA 372

Query: 621 MVILDRLEKKL--W-IRTATTLVRKL 643
           +   + ++     W   T  TL+R L
Sbjct: 373 LDTFNDMKTDAIRWNFATFNTLIRGL 398



 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 73/148 (49%)

Query: 154 SFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHP 213
           S  E G + +      +M  +G VP+    + ++    + G ++ +  L  +M  RG  P
Sbjct: 467 SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLP 526

Query: 214 DSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYF 273
            S+++  +++ +CK   V+   K++  M +RG + D  S+  ++ E C KG   +A   F
Sbjct: 527 RSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLF 586

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSI 301
            +  +  + P+   ++S++  L ++ +I
Sbjct: 587 SRMVEKSIVPDPSMWSSLMFCLSQKTAI 614


>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
           (TPR)-like superfamily protein | chr2:17403744-17407127
           REVERSE LENGTH=822
          Length = 822

 Score =  181 bits (459), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 238/523 (45%), Gaps = 38/523 (7%)

Query: 145 HEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFE 204
           +++   M+R  A    + +A  + FEM      P+ +T + ++      G   +A  L +
Sbjct: 143 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202

Query: 205 EMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKG 264
           +M    + P  ++Y  ++ A    GN  EA +    M D G   D  +  +++S +    
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW--KPNVYT 322
             ++AL YF       ++P+   F  +I  L K G   QA ++   M  +    +P+V T
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
            T+++     KG  E    +F  +V +E  KPN+++Y A++  Y        A  +LG +
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMV-AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 381

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           K+ G+IP+  +YT L++ + ++    +A ++  +M +E   PN+ TYNA++D     G +
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441

Query: 443 QEAYKMLKDGFHNGLEADKVT-----------------------------------YNIL 467
            EA ++ +    +G++ + V+                                   YN  
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           I  +   A++++A+AL+  M K  ++ D  ++T LI+  CR  +  E+  + +E      
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
             TK  Y+S++C Y ++G +T A   F++M   GC PD IAY +++       K  +A  
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 621

Query: 588 LYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           L+  M   G+ P  +    L   + K     +  V++D + +K
Sbjct: 622 LFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664



 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 156/363 (42%), Gaps = 5/363 (1%)

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LI  L ++G  E    +F  +   +N       Y  MI  + R + +++A  L   M++ 
Sbjct: 113 LIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKW 172

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
              P+  TY  LI+ H +AG +  A +LM+ M R   +P+  TYN +++     G  +EA
Sbjct: 173 SCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREA 232

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            ++ K    NG+  D VT+NI++S +       +AL+ F  M  + ++PD  ++  +I  
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 292

Query: 506 FCREKRMSESEMFFE--EAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
             +  + S++   F      R    P   T+TS++  Y  +G +      F  M   G  
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSA--- 620
           P+ ++Y  L+           A  +   + + G+IP  V+   L   Y +      A   
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412

Query: 621 MVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYE 680
            +++ +  +K  + T   L+    S   +  A   F ++       N V++   + AC  
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472

Query: 681 SNK 683
           S K
Sbjct: 473 SKK 475



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/400 (20%), Positives = 173/400 (43%), Gaps = 8/400 (2%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
             ++ ++   G L EAVE+  +M   G+ PN  ++  ++              +     +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
           RG++ ++A+Y   + +Y     + +A      M  +    D+ +FT++IS  C       
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A+ Y  +  D+ +      ++S++    K+G + +A  +  +M   G +P+V  +T+++ 
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 608

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
                    KA  LFL++  +   +P+ +  +A++  + +  + +   +L+  M+E+  I
Sbjct: 609 AYNASEKWGKACELFLEM-EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE-I 666

Query: 389 PNTNTYTTLIDGHCKA-GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
           P T      I   C     ++RA DL+ +M     S +I   N ++    K G+V+   K
Sbjct: 667 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 726

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           +      +G+  +  TY IL+       + ++ + +   M+ +GIQP    Y  +I+   
Sbjct: 727 LFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGE 786

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNL 547
           R   +      FE  +R      +     +I  +  EG L
Sbjct: 787 RSAGIE-----FEPLIRQKLESLRNKGEGLIPTFRHEGTL 821



 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/375 (20%), Positives = 148/375 (39%), Gaps = 38/375 (10%)

Query: 155 FAEIGRLKEAVEMVFEMHNQGMV--PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVH 212
            +++G+  +A+++   M  +     P+  T   +M +    G ++  + +FE M A G+ 
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352

Query: 213 PDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRY 272
           P+  SY  ++ AY   G    A   L  +   G + D  S+T +++ +       +A   
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412

Query: 273 FHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYT---------- 322
           F        KPN++ + ++I+     G + +A E+  +M   G KPNV +          
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472

Query: 323 -------------------------HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
                                    + + I         EKA  L+  + R +  K + +
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM-RKKKVKADSV 531

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           T+T +I+G CR  K   A   L  M++  +      Y++++  + K G    A  + N M
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
              G  P++  Y +++       +  +A ++  +   NG+E D +  + L+    K    
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 651

Query: 478 KQALALFSKMAKSGI 492
                L   M +  I
Sbjct: 652 SNVFVLMDLMREKEI 666


>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
           (TPR)-like superfamily protein | chr2:17403861-17406648
           REVERSE LENGTH=683
          Length = 683

 Score =  181 bits (458), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 238/523 (45%), Gaps = 38/523 (7%)

Query: 145 HEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFE 204
           +++   M+R  A    + +A  + FEM      P+ +T + ++      G   +A  L +
Sbjct: 11  NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70

Query: 205 EMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKG 264
           +M    + P  ++Y  ++ A    GN  EA +    M D G   D  +  +++S +    
Sbjct: 71  DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW--KPNVYT 322
             ++AL YF       ++P+   F  +I  L K G   QA ++   M  +    +P+V T
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
            T+++     KG  E    +F  +V +E  KPN+++Y A++  Y        A  +LG +
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMV-AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           K+ G+IP+  +YT L++ + ++    +A ++  +M +E   PN+ TYNA++D     G +
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 309

Query: 443 QEAYKMLKDGFHNGLEADKVT-----------------------------------YNIL 467
            EA ++ +    +G++ + V+                                   YN  
Sbjct: 310 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 369

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           I  +   A++++A+AL+  M K  ++ D  ++T LI+  CR  +  E+  + +E      
Sbjct: 370 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 429

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
             TK  Y+S++C Y ++G +T A   F++M   GC PD IAY +++       K  +A  
Sbjct: 430 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 489

Query: 588 LYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           L+  M   G+ P  +    L   + K     +  V++D + +K
Sbjct: 490 LFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532



 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 144/330 (43%), Gaps = 5/330 (1%)

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y  MI  + R + +++A  L   M++    P+  TY  LI+ H +AG +  A +LM+ M 
Sbjct: 14  YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
           R   +P+  TYN +++     G  +EA ++ K    NG+  D VT+NI++S +       
Sbjct: 74  RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE--AVRFGFIPTKRTYTS 536
           +AL+ F  M  + ++PD  ++  +I    +  + S++   F      R    P   T+TS
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           ++  Y  +G +      F  M   G  P+ ++Y  L+           A  +   + + G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253

Query: 597 LIPCEVTRITLAYEYCKIDDCCSA---MVILDRLEKKLWIRTATTLVRKLCSERKVGMAA 653
           +IP  V+   L   Y +      A    +++ +  +K  + T   L+    S   +  A 
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313

Query: 654 LFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
             F ++       N V++   + AC  S K
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343



 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/356 (20%), Positives = 160/356 (44%), Gaps = 3/356 (0%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
            ++ ++   G L EAVE+  +M   G+ PN  ++  ++              +     +R
Sbjct: 298 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR 357

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           G++ ++A+Y   + +Y     + +A      M  +    D+ +FT++IS  C       A
Sbjct: 358 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 417

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           + Y  +  D+ +      ++S++    K+G + +A  +  +M   G +P+V  +T+++  
Sbjct: 418 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 477

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
                   KA  LFL++  +   +P+ +  +A++  + +  + +   +L+  M+E+  IP
Sbjct: 478 YNASEKWGKACELFLEM-EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE-IP 535

Query: 390 NTNTYTTLIDGHCKA-GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
            T      I   C     ++RA DL+ +M     S +I   N ++    K G+V+   K+
Sbjct: 536 FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKL 595

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
                 +G+  +  TY IL+       + ++ + +   M+ +GIQP    Y  +I+
Sbjct: 596 FYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 651



 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/375 (20%), Positives = 148/375 (39%), Gaps = 38/375 (10%)

Query: 155 FAEIGRLKEAVEMVFEMHNQGMV--PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVH 212
            +++G+  +A+++   M  +     P+  T   +M +    G ++  + +FE M A G+ 
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220

Query: 213 PDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRY 272
           P+  SY  ++ AY   G    A   L  +   G + D  S+T +++ +       +A   
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280

Query: 273 FHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYT---------- 322
           F        KPN++ + ++I+     G + +A E+  +M   G KPNV +          
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340

Query: 323 -------------------------HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
                                    + + I         EKA  L+  + R +  K + +
Sbjct: 341 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM-RKKKVKADSV 399

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           T+T +I+G CR  K   A   L  M++  +      Y++++  + K G    A  + N M
Sbjct: 400 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
              G  P++  Y +++       +  +A ++  +   NG+E D +  + L+    K    
Sbjct: 460 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 519

Query: 478 KQALALFSKMAKSGI 492
                L   M +  I
Sbjct: 520 SNVFVLMDLMREKEI 534


>AT5G16420.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr5:5368034-5369641 FORWARD
           LENGTH=535
          Length = 535

 Score =  179 bits (455), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 195/405 (48%), Gaps = 24/405 (5%)

Query: 264 GFATR---ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ-----G 315
           G A R   ++R F +  D G+K ++ +  +++  L +     Q F+++  M        G
Sbjct: 131 GLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQ----NQRFDLVHAMFKNSKESFG 186

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
             PN++T   L+  LCKK   E A+++ L  + S    PN++TYT ++ GY     +  A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKV-LDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
           + +L  M ++G  P+  TYT L+DG+CK G F  A  +M+ M +    PN  TY  ++  
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
           LCK+ +  EA  M  +        D      +I   C+   + +A  L+ KM K+   PD
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
               +TLI   C+E R++E+   F+E  + G IP+  TY ++I G C +G LT A + + 
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKID 615
            M +  C P++  Y  LI GL K   + E   + + M+E G  P + T + L     K+ 
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLG 484

Query: 616 DCCSAMVILD------RLEKKLWIRTATTLVRKLCSERKVGMAAL 654
               AM I+       +++K+ W       ++K   E   G+  L
Sbjct: 485 KEEDAMKIVSMAVMNGKVDKESW----ELFLKKFAGELDKGVLPL 525



 Score =  147 bits (370), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 167/335 (49%), Gaps = 3/335 (0%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           G+ PN  T NL++K  C+   ++ A  + +E+ + G+ P+  +Y  ++  Y   G++  A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
            + L  MLDRG+  D  ++T+++  +C+ G  + A           ++PN + +  MI  
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
           LCK     +A  M +EM+ + + P+      +ID LC+    ++A  L+ K++++ N  P
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN-NCMP 364

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           +    + +I+  C++ ++  A  L     E+G IP+  TY TLI G C+ G    A  L 
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
           + M      PN  TYN +++GL K G V+E  ++L++    G   +K T+ IL     K 
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKL 483

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
              + A+ + S    +G + D  S+   +  F  E
Sbjct: 484 GKEEDAMKIVSMAVMNG-KVDKESWELFLKKFAGE 517



 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 159/342 (46%), Gaps = 6/342 (1%)

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ-GLIPNTN 392
           G  E + R+FL+ +     K +V +   ++N   ++ + +    +    KE  G+ PN  
Sbjct: 134 GRYESSMRIFLR-IPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIF 192

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG 452
           T   L+   CK  + E A+ +++ +   G  PN+ TY  I+ G   +G ++ A ++L++ 
Sbjct: 193 TCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
              G   D  TY +L+  +CK     +A  +   M K+ I+P+  +Y  +I   C+EK+ 
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
            E+   F+E +   F+P       +I   C +  +  A   + +M  + C+PD+    TL
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW 632
           I  LCK+ ++ EAR L+D   EKG IP  +T  TL    C+  +   A  + D + ++  
Sbjct: 373 IHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKC 431

Query: 633 IRTATT---LVRKLCSERKVGMAALFFHKLLDMDFHVNRVTL 671
              A T   L+  L     V        ++L++    N+ T 
Sbjct: 432 KPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473



 Score =  129 bits (324), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 160/326 (49%), Gaps = 3/326 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V++  +   ++ A +++ E+ + G+VPN  T   ++      G ++ A+ + EEM  RG
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
            +PD+ +Y V++  YCK+G   EA   +  M       +  ++ ++I   C++  +  A 
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F +  +    P+      +I+ LC+   + +A  +  +M+     P+    + LI  L
Sbjct: 317 NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWL 376

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK+G   +A +LF +    + + P++LTY  +I G C   +L  A  L   M E+   PN
Sbjct: 377 CKEGRVTEARKLFDEF--EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPN 434

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY  LI+G  K GN +    ++  M   G  PN  T+  + +GL K G+ ++A K++ 
Sbjct: 435 AFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS 494

Query: 451 DGFHNGLEADKVTYNILISEHCKQAD 476
               NG + DK ++ + + +   + D
Sbjct: 495 MAVMNG-KVDKESWELFLKKFAGELD 519



 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 125/288 (43%), Gaps = 8/288 (2%)

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI---LISEHCKQ 474
           S  GF+ N  TY++I+  L  + R  +  + L     N     K   N+   L+  +   
Sbjct: 75  SHPGFTHNYDTYHSILFKL-SRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLA 133

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR-FGFIPTKRT 533
              + ++ +F ++   G++  + S  TL+ V  + +R       F+ +   FG  P   T
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193

Query: 534 YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
              ++   C++ ++  A K    +   G VP+ + Y T++ G   +  ++ A+ + + M+
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253

Query: 594 EKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKLCSERKVG 650
           ++G  P   T   L   YCK+     A  ++D +EK        T   ++R LC E+K G
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313

Query: 651 MAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSARIYKDN 698
            A   F ++L+  F  +       + A  E +K      L  ++ K+N
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNN 361


>AT1G08610.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:2733788-2735467 REVERSE
           LENGTH=559
          Length = 559

 Score =  179 bits (455), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 227/468 (48%), Gaps = 7/468 (1%)

Query: 111 FFHWAIGYS-RFR-HFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMV 168
           F H+ +G + R R   M+ + + +   I   + +  +E++  +  +    G+L +A ++V
Sbjct: 72  FHHYGVGTNLRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSN----GKLTDACKLV 127

Query: 169 FEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKM 228
             M     VP+  + + +++    +  +D A  +   M   G  PD+ +Y +++   CK 
Sbjct: 128 EVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKK 187

Query: 229 GNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINF 288
           G++  A   L  M   G   D  ++  +I    + G A +A+R++      G  P +I +
Sbjct: 188 GHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITY 247

Query: 289 TSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVR 348
           T ++E +C+     +A E+LE+M  +G  P++ T+ +L++  C++G  E+   + ++ + 
Sbjct: 248 TVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASV-IQHIL 306

Query: 349 SENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFE 408
           S   + N +TY  +++  C  +  +  E +L  M +    P   TY  LI+G CKA    
Sbjct: 307 SHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLS 366

Query: 409 RAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILI 468
           RA D    M  +   P+I TYN ++  + K+G V +A ++L    +       +TYN +I
Sbjct: 367 RAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVI 426

Query: 469 SEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFI 528
               K+  +K+AL L+ +M  +GI PD  +  +LI  FCR   + E+    +E    G  
Sbjct: 427 DGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNG 486

Query: 529 PTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
               TY  +I G C++  + MAI+    M   GC PD   Y  ++ G+
Sbjct: 487 IRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534



 Score =  164 bits (416), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 202/410 (49%), Gaps = 10/410 (2%)

Query: 249 DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           D  +   I+   C  G  T A +     +     P+  + ++++ GL +   + +A  +L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162

Query: 309 EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR 368
             MV  G  P+  T+  +I  LCKKG    A  L   +  S  + P+V+TY  +I   C 
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLS-GSPPDVITYNTVIR--CM 219

Query: 369 DDKLNRAEMLLGRMKEQ---GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPN 425
            D  N AE  +   K+Q   G  P   TYT L++  C+     RA +++  M+ EG  P+
Sbjct: 220 FDYGN-AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPD 278

Query: 426 ICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFS 485
           I TYN++V+  C++G ++E   +++    +GLE + VTYN L+   C      +   + +
Sbjct: 279 IVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILN 338

Query: 486 KMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREG 545
            M ++   P + +Y  LI   C+ + +S +  FF + +    +P   TY +++    +EG
Sbjct: 339 IMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEG 398

Query: 546 NLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRI 605
            +  AI+    + +  C P  I Y ++I GL K+  + +A  LY  M++ G+ P ++TR 
Sbjct: 399 MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRR 458

Query: 606 TLAYEYCKIDDCCSAMVILDRLEKK-LWIRTAT--TLVRKLCSERKVGMA 652
           +L Y +C+ +    A  +L     +   IR +T   +++ LC ++++ MA
Sbjct: 459 SLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMA 508



 Score =  155 bits (392), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 195/423 (46%), Gaps = 1/423 (0%)

Query: 179 NTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL 238
           + +T N ++   C  G +  A  L E M+     P   S   +V    ++  + +A   L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
            VM+  G + D  ++ +II   C+KG    AL      S  G  P++I + ++I  +   
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
           G+ +QA    ++ +  G  P + T+T L++ +C+   + +A  + L+ +  E   P+++T
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEV-LEDMAVEGCYPDIVT 281

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y +++N  CR   L     ++  +   GL  NT TY TL+   C    ++   +++N+M 
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMY 341

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
           +  + P + TYN +++GLCK   +  A              D VTYN ++    K+  + 
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVD 401

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
            A+ L   +  +   P + +Y ++I    ++  M ++   + + +  G  P   T  S+I
Sbjct: 402 DAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
            G+CR   +  A +     S+ G       Y  +I GLCK+ +++ A  + + M+  G  
Sbjct: 462 YGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCK 521

Query: 599 PCE 601
           P E
Sbjct: 522 PDE 524



 Score =  115 bits (289), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 143/282 (50%), Gaps = 1/282 (0%)

Query: 164 AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
           A+E++ +M  +G  P+  T N ++   C  G ++    + + + + G+  ++ +Y  ++ 
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP 283
           + C      E ++ L++M    +     ++ ++I+  C+    +RA+ +F++  +    P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF 343
           +++ + +++  + K G +  A E+L  +      P + T+ ++IDGL KKG  +KA  L+
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELY 442

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK 403
            +++ +    P+ +T  ++I G+CR + +  A  +L     +G     +TY  +I G CK
Sbjct: 443 HQMLDA-GIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCK 501

Query: 404 AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
               E A +++ +M   G  P+   Y AIV G+ + G   EA
Sbjct: 502 KKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543



 Score =  108 bits (271), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 3/288 (1%)

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG 452
           T   ++   C  G    A  L+ +M+R    P+  + + +V GL +  ++ +A  +L+  
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
             +G   D +TYN++I   CK+  I+ AL L   M+ SG  PD+ +Y T+I         
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
            ++  F+++ ++ G  P   TYT ++   CR      AI+    M+  GC PD + Y +L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW 632
           ++  C++  L+E   +   ++  GL    VT  TL +  C  +       IL+ + +  +
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345

Query: 633 IRTATT---LVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
             T  T   L+  LC  R +  A  FF+++L+     + VT    + A
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393



 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 84/179 (46%)

Query: 161 LKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRV 220
           L  A++  ++M  Q  +P+  T N V+    + G+VD A  L   +      P   +Y  
Sbjct: 365 LSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNS 424

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           ++    K G + +A +    MLD G   D+ +   +I  FC       A +   + S+ G
Sbjct: 425 VIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
                  +  +I+GLCK+  I+ A E++E M+  G KP+   +TA++ G+ + G   +A
Sbjct: 485 NGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543



 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 3/221 (1%)

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
           E D+ T N ++   C    +  A  L   MA+    P   S + L+    R  ++ ++  
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
                V  G +P   TY  +I   C++G++  A+     MS  G  PD I Y T+I  + 
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220

Query: 578 KQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW---IR 634
                ++A   +   ++ G  P  +T   L    C+      A+ +L+ +  +     I 
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280

Query: 635 TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
           T  +LV   C    +   A     +L     +N VT    +
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321



 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 60/120 (50%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++   A+ G +K+A+E+  +M + G+ P+  T   ++   C   LV+ A  + +E S RG
Sbjct: 425 VIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
                ++YR+++   CK   +  A + + +ML  G   D   +T I+    E G  + A+
Sbjct: 485 NGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544


>AT5G28370.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:10332375-10334558 REVERSE
           LENGTH=727
          Length = 727

 Score =  178 bits (452), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/532 (25%), Positives = 224/532 (42%), Gaps = 83/532 (15%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM-- 206
           + ++R F  +G + ++V +V+E  +  M  N+Q  N+V+ +    GLVD A  + +EM  
Sbjct: 156 KLLIRWFGRMGMVNQSV-LVYERLDSNM-KNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQ 213

Query: 207 -------------------------------------SARGVHPDSASYRVMVVAYCKMG 229
                                                S+ GV P+S      + + CK  
Sbjct: 214 KESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273

Query: 230 NVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFT 289
               A   LS ++     ++   F  ++S        +R      K  ++ ++P+++   
Sbjct: 274 RANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333

Query: 290 SMIEGLCKRGSIKQAFEMLEEMVCQG------WKPNVYTHTALIDGLCKKGWTEKAFRLF 343
            +I  LCK   + +A E+ E+M  +        K +      LIDGLCK G  ++A  L 
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK 403
           +++   E   PN +TY  +I+GYCR  KL  A+ ++ RMKE  + PN  T  T++ G C+
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453

Query: 404 -----------------------------------AGNFERAFDLMNLMSREGFSPNICT 428
                                                N E+A      M   G SP+   
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           Y A++ GLC+  R  +A ++++     G   D + YN+LI   C + + ++   + + M 
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
           K G +PD  +Y TLI+ F + K     E   E+    G  PT  TY ++I  YC  G L 
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633

Query: 549 MAIKFFHRMSDHGCV-PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            A+K F  M  H  V P+++ Y  LI+   K     +A  L + M  K + P
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685



 Score =  148 bits (374), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 186/399 (46%), Gaps = 48/399 (12%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           ++ C+ R+  +I R+ +   +V +M    + P+  TL +++   C+   VD A  +FE+M
Sbjct: 300 LLSCLGRNM-DISRMND---LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM 355

Query: 207 SARG------VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNA-SFTLIISE 259
             +       +  DS  +  ++   CK+G + EA++ L  M      V NA ++  +I  
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDG 415

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
           +C  G    A     +  +  +KPN++   +++ G+C+   +  A     +M  +G K N
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYC---RD------- 369
           V T+  LI   C     EKA   + K++ +    P+   Y A+I+G C   RD       
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEA-GCSPDAKIYYALISGLCQVRRDHDAIRVV 534

Query: 370 DKL----------------------NRAEM---LLGRMKEQGLIPNTNTYTTLIDGHCKA 404
           +KL                      N AE    +L  M+++G  P++ TY TLI    K 
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD-GFHNGLEADKVT 463
            +FE    +M  M  +G  P + TY A++D  C  G + EA K+ KD G H+ +  + V 
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           YNILI+   K  +  QAL+L  +M    ++P++ +Y  L
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693



 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 2/304 (0%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
            C++  +   G+L+ A E+V  M    + PN  T+N ++   C    ++ A   F +M  
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            GV  +  +Y  ++ A C + NV +A  W   ML+ G   D   +  +IS  C+      
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A+R   K  + G   +L+ +  +I   C + + ++ +EML +M  +G KP+  T+  LI 
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
              K    E   R+ ++ +R +   P V TY A+I+ YC   +L+ A  L   M     +
Sbjct: 590 FFGKHKDFESVERM-MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648

Query: 389 -PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            PNT  Y  LI+   K GNF +A  L   M  +   PN+ TYNA+   L +K + +   K
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708

Query: 448 MLKD 451
           ++ +
Sbjct: 709 LMDE 712



 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 149/333 (44%), Gaps = 4/333 (1%)

Query: 138 NGNLQKAHEV-MQCMVRSFAEIGRLKEAVEMVFEMH-NQGMVPNTQTLNLVMKIACEMGL 195
           +GN+ KA  +    ++    ++GRLKEA E++  M   +  VPN  T N ++   C  G 
Sbjct: 362 DGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGK 421

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           ++ A+ +   M    + P+  +   +V   C+   +  A  +   M   G   +  ++  
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           +I   C      +A+ ++ K  + G  P+   + ++I GLC+      A  ++E++   G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
           +  ++  +  LI   C K   EK + +   +   E  KP+ +TY  +I+ + +       
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM-EKEGKKPDSITYNTLISFFGKHKDFESV 600

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS-REGFSPNICTYNAIVD 434
           E ++ +M+E GL P   TY  +ID +C  G  + A  L   M      +PN   YN +++
Sbjct: 601 ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILIN 660

Query: 435 GLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
              K G   +A  + ++     +  +  TYN L
Sbjct: 661 AFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 142/339 (41%), Gaps = 37/339 (10%)

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM--KEQGLIPNTNTYTTLIDGHCKAG 405
           R ++N  N      +++   R+  ++ A  +L  M  KE    PN  T   ++    K  
Sbjct: 177 RLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKER 236

Query: 406 NF--ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
               E+   L++  S  G SPN       +  LCK  R   A+ +L D   N    +   
Sbjct: 237 LLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPP 296

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
           +N L+S   +  DI +   L  KM +  I+PD+ +   LI   C+ +R+ E+   FE+  
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ-- 354

Query: 524 RFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
               +  KRT          +GN+  A              DSI + TLI GLCK  +L 
Sbjct: 355 ----MRGKRT---------DDGNVIKA--------------DSIHFNTLIDGLCKVGRLK 387

Query: 584 EARGLYDSM-IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL---EKKLWIRTATTL 639
           EA  L   M +E+  +P  VT   L   YC+     +A  ++ R+   E K  + T  T+
Sbjct: 388 EAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTI 447

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTAC 678
           V  +C    + MA +FF  +       N VT    + AC
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486



 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 7/202 (3%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
            ++    ++ R  +A+ +V ++   G   +    N+++ + C+    +    +  +M   
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           G  PDS +Y  ++  + K  +    ++ +  M + G      ++  +I  +C  G    A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635

Query: 270 LRYFHKFSDMGL----KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
           L+ F    DMGL     PN + +  +I    K G+  QA  + EEM  +  +PNV T+ A
Sbjct: 636 LKLF---KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692

Query: 326 LIDGLCKKGWTEKAFRLFLKLV 347
           L   L +K   E   +L  ++V
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMV 714


>AT5G28460.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:10374927-10377227 FORWARD
           LENGTH=766
          Length = 766

 Score =  178 bits (451), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/532 (25%), Positives = 224/532 (42%), Gaps = 83/532 (15%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM-- 206
           + ++R F  +G + ++V +V+E  +  M  N+Q  N+V+ +    GLVD A  + +EM  
Sbjct: 156 KLLIRWFGRMGMVNQSV-LVYERLDSNM-KNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQ 213

Query: 207 -------------------------------------SARGVHPDSASYRVMVVAYCKMG 229
                                                S+ GV P+S      + + CK  
Sbjct: 214 KESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273

Query: 230 NVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFT 289
               A   LS ++     ++   F  ++S        +R      K  ++ ++P+++   
Sbjct: 274 RANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333

Query: 290 SMIEGLCKRGSIKQAFEMLEEMVCQG------WKPNVYTHTALIDGLCKKGWTEKAFRLF 343
            +I  LCK   + +A E+ E+M  +        K +      LIDGLCK G  ++A  L 
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK 403
           +++   E   PN +TY  +I+GYCR  KL  A+ ++ RMKE  + PN  T  T++ G C+
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453

Query: 404 -----------------------------------AGNFERAFDLMNLMSREGFSPNICT 428
                                                N E+A      M   G SP+   
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           Y A++ GLC+  R  +A ++++     G   D + YN+LI   C + + ++   + + M 
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
           K G +PD  +Y TLI+ F + K     E   E+    G  PT  TY ++I  YC  G L 
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633

Query: 549 MAIKFFHRMSDHGCV-PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            A+K F  M  H  V P+++ Y  LI+   K     +A  L + M  K + P
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685



 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 142/339 (41%), Gaps = 37/339 (10%)

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM--KEQGLIPNTNTYTTLIDGHCKAG 405
           R ++N  N      +++   R+  ++ A  +L  M  KE    PN  T   ++    K  
Sbjct: 177 RLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKER 236

Query: 406 NF--ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
               E+   L++  S  G SPN       +  LCK  R   A+ +L D   N    +   
Sbjct: 237 LLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPP 296

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
           +N L+S   +  DI +   L  KM +  I+PD+ +   LI   C+ +R+ E+   FE+  
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ-- 354

Query: 524 RFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
               +  KRT          +GN+  A              DSI + TLI GLCK  +L 
Sbjct: 355 ----MRGKRT---------DDGNVIKA--------------DSIHFNTLIDGLCKVGRLK 387

Query: 584 EARGLYDSM-IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL---EKKLWIRTATTL 639
           EA  L   M +E+  +P  VT   L   YC+     +A  ++ R+   E K  + T  T+
Sbjct: 388 EAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTI 447

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTAC 678
           V  +C    + MA +FF  +       N VT    + AC
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486



 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 85/177 (48%), Gaps = 1/177 (0%)

Query: 155 FAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
           F +    ++  EM+ +M  +G  P++ T N ++    +    +  + + E+M   G+ P 
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT 615

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVM-LDRGFLVDNASFTLIISEFCEKGFATRALRYF 273
             +Y  ++ AYC +G + EA K    M L      +   + ++I+ F + G   +AL   
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
            +     ++PN+  + ++ + L ++   +   ++++EMV Q  +PN  T   L++ L
Sbjct: 676 EEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732


>AT3G61520.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:22768974-22771274 REVERSE
           LENGTH=766
          Length = 766

 Score =  177 bits (450), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/530 (25%), Positives = 223/530 (42%), Gaps = 83/530 (15%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM---- 206
           ++R F  +G + ++V +V+E  +  M  N+Q  N+V+ +    GLVD A  + +EM    
Sbjct: 158 LIRWFGRMGMVNQSV-LVYERLDSNM-KNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKE 215

Query: 207 -----------------------------------SARGVHPDSASYRVMVVAYCKMGNV 231
                                              S+ GV P+S      + + CK    
Sbjct: 216 SVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARA 275

Query: 232 LEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSM 291
             A   LS ++     ++   F  ++S        +R      K  ++ ++P+++    +
Sbjct: 276 NAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGIL 335

Query: 292 IEGLCKRGSIKQAFEMLEEMVCQG------WKPNVYTHTALIDGLCKKGWTEKAFRLFLK 345
           I  LCK   + +A E+ E+M  +        K +      LIDGLCK G  ++A  L ++
Sbjct: 336 INTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVR 395

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK-- 403
           +   E   PN +TY  +I+GYCR  KL  A+ ++ RMKE  + PN  T  T++ G C+  
Sbjct: 396 MKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455

Query: 404 ---------------------------------AGNFERAFDLMNLMSREGFSPNICTYN 430
                                              N E+A      M   G SP+   Y 
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
           A++ GLC+  R  +A ++++     G   D + YN+LI   C + + ++   + + M K 
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKE 575

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           G +PD  +Y TLI+ F + K     E   E+    G  PT  TY ++I  YC  G L  A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635

Query: 551 IKFFHRMSDHGCV-PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           +K F  M  H  V P+++ Y  LI+   K     +A  L + M  K + P
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685



 Score = 92.4 bits (228), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 141/339 (41%), Gaps = 37/339 (10%)

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM--KEQGLIPNTNTYTTLIDGHCKAG 405
           R ++N  N      +++   R+  ++ A  +L  M  KE    PN  T   ++    K  
Sbjct: 177 RLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGR 236

Query: 406 NF--ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
               E+   L++  S  G SPN       +  LCK  R   A+ +L D   N    +   
Sbjct: 237 LLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPP 296

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
           +N L+S   +  DI +   L  KM +  I+PD+ +   LI   C+ +R+ E+   FE+  
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEK-- 354

Query: 524 RFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
               +  KRT          +GN+  A              DSI + TLI GLCK  +L 
Sbjct: 355 ----MRGKRT---------DDGNVIKA--------------DSIHFNTLIDGLCKVGRLK 387

Query: 584 EARGLYDSM-IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL---EKKLWIRTATTL 639
           EA  L   M +E+   P  VT   L   YC+     +A  ++ R+   E K  + T  T+
Sbjct: 388 EAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTI 447

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTAC 678
           V  +C    + MA +FF  +       N VT    + AC
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486



 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 85/177 (48%), Gaps = 1/177 (0%)

Query: 155 FAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
           F +    ++  EM+ +M  +G  P++ T N ++    +    +  + + E+M   G+ P 
Sbjct: 556 FCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT 615

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVM-LDRGFLVDNASFTLIISEFCEKGFATRALRYF 273
             +Y  ++ AYC +G + EA K    M L      +   + ++I+ F + G   +AL   
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
            +     ++PN+  + ++ + L ++   +   ++++EMV Q  +PN  T   L++ L
Sbjct: 676 EEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732


>AT5G24830.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:8531226-8533266 FORWARD
           LENGTH=593
          Length = 593

 Score =  175 bits (444), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 208/434 (47%), Gaps = 7/434 (1%)

Query: 186 VMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRG 245
           +M+  C  G +D A +L ++M   GV P   ++  ++   CK G + +AD  +  M + G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186

Query: 246 FLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSI-KQA 304
              +  S+  +I   C      +AL  F+  +  G++PN +    ++  LC++G I    
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246

Query: 305 FEMLEEMV--CQGWKP-NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP-NVLTYT 360
            ++LEE++   Q   P ++   T L+D   K G   +A  ++ ++  S+ N P + + Y 
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM--SQKNVPADSVVYN 304

Query: 361 AMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE 420
            +I G C    +  A   +  M ++G+ P+  TY TLI   CK G F+ A DL   M   
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364

Query: 421 GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
           G +P+  +Y  I+ GLC  G V  A + L     + L  + + +N++I  + +  D   A
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSA 424

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
           L++ + M   G++P++++   LI  + +  R+ ++     E       P   TY  ++  
Sbjct: 425 LSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGA 484

Query: 541 YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC 600
            C  G+L +A + +  M   GC PD I Y  L+ GLC + +L +A  L   +   G+   
Sbjct: 485 ACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITID 544

Query: 601 EVTRITLAYEYCKI 614
            V  + LA +Y ++
Sbjct: 545 HVPFLILAKKYTRL 558



 Score =  160 bits (405), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 196/443 (44%), Gaps = 5/443 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++R     G+L  A+ +  +M   G++P   T N ++   C+ G ++ A  L  EM   G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA---- 266
             P+  SY  ++   C + NV +A    + M   G   +  +  +I+   C+KG      
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
            + L      S      +++  T +++   K G++ QA E+ +EM  +    +   +  +
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           I GLC  G    A+     +V+   N P+V TY  +I+  C++ K + A  L G M+  G
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVN-PDVFTYNTLISALCKEGKFDEACDLHGTMQNGG 365

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           + P+  +Y  +I G C  G+  RA + +  M +    P +  +N ++DG  + G    A 
Sbjct: 366 VAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSAL 425

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
            +L      G++ +  T N LI  + K   +  A  + ++M  + I PD  +Y  L+   
Sbjct: 426 SVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAA 485

Query: 507 CREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS 566
           C    +  +   ++E +R G  P   TYT ++ G C +G L  A     R+   G   D 
Sbjct: 486 CTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDH 545

Query: 567 IAYGTLISGLCKQSKLDEARGLY 589
           + +  L     +  +  EA  +Y
Sbjct: 546 VPFLILAKKYTRLQRPGEAYLVY 568



 Score =  146 bits (369), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 172/375 (45%), Gaps = 40/375 (10%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLV------------DY 198
           +++    +  + +A+ +   M+  G+ PN  T N+++   C+ G++            D 
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS 256

Query: 199 AQY---------------------------LFEEMSARGVHPDSASYRVMVVAYCKMGNV 231
           +Q                            +++EMS + V  DS  Y V++   C  GN+
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNM 316

Query: 232 LEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSM 291
           + A  ++  M+ RG   D  ++  +IS  C++G    A        + G+ P+ I++  +
Sbjct: 317 VAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVI 376

Query: 292 IEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSEN 351
           I+GLC  G + +A E L  M+     P V     +IDG  + G T  A  + L L+ S  
Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV-LNLMLSYG 435

Query: 352 NKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAF 411
            KPNV T  A+I+GY +  +L  A  +   M+   + P+T TY  L+   C  G+   AF
Sbjct: 436 VKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAF 495

Query: 412 DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEH 471
            L + M R G  P+I TY  +V GLC KGR+++A  +L      G+  D V + IL  ++
Sbjct: 496 QLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKY 555

Query: 472 CKQADIKQALALFSK 486
            +     +A  ++ K
Sbjct: 556 TRLQRPGEAYLVYKK 570



 Score =  146 bits (369), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 177/410 (43%), Gaps = 40/410 (9%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++    + G +++A  +V EM   G  PN  + N ++K  C +  VD A YLF  M+  G
Sbjct: 162 LLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYG 221

Query: 211 VHPDSASYRVMVVAYC---------------------------------------KMGNV 231
           + P+  +  ++V A C                                       K GNV
Sbjct: 222 IRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNV 281

Query: 232 LEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSM 291
           ++A +    M  +    D+  + +II   C  G    A  +       G+ P++  + ++
Sbjct: 282 VQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTL 341

Query: 292 IEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSEN 351
           I  LCK G   +A ++   M   G  P+  ++  +I GLC  G   +A   FL  +   +
Sbjct: 342 ISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANE-FLLSMLKSS 400

Query: 352 NKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAF 411
             P VL +  +I+GY R    + A  +L  M   G+ PN  T   LI G+ K G    A+
Sbjct: 401 LLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAW 460

Query: 412 DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEH 471
            + N M      P+  TYN ++   C  G ++ A+++  +    G + D +TY  L+   
Sbjct: 461 WVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGL 520

Query: 472 CKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
           C +  +K+A +L S++  +GI  D   +  L   + R +R  E+ + +++
Sbjct: 521 CWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKK 570



 Score =  143 bits (361), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 183/421 (43%), Gaps = 8/421 (1%)

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           I+ + C +G    AL    K    G+ P LI    ++ GLCK G I++A  ++ EM   G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL-NR 374
             PN  ++  LI GLC     +KA  LF   +     +PN +T   +++  C+   + N 
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLF-NTMNKYGIRPNRVTCNIIVHALCQKGVIGNN 245

Query: 375 AEMLLGRM--KEQGLIP-NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
            + LL  +    Q   P +    T L+D   K GN  +A ++   MS++    +   YN 
Sbjct: 246 NKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNV 305

Query: 432 IVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           I+ GLC  G +  AY  + D    G+  D  TYN LIS  CK+    +A  L   M   G
Sbjct: 306 IIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGG 365

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
           + PD  SY  +I   C    ++ +  F    ++   +P    +  +I GY R G+ + A+
Sbjct: 366 VAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSAL 425

Query: 552 KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEY 611
              + M  +G  P+      LI G  K  +L +A  + + M    + P   T   L    
Sbjct: 426 SVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAA 485

Query: 612 CKIDDCCSAMVILDRLEKKLW---IRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNR 668
           C +     A  + D + ++     I T T LVR LC + ++  A     ++      ++ 
Sbjct: 486 CTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDH 545

Query: 669 V 669
           V
Sbjct: 546 V 546



 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 2/118 (1%)

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
           IHS  +++   C + ++  +    ++ +  G IP   T+  ++ G C+ G +  A     
Sbjct: 123 IHS--SIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
            M + G  P+ ++Y TLI GLC  + +D+A  L+++M + G+ P  VT   + +  C+
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238


>AT3G49730.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:18445730-18447646 REVERSE
           LENGTH=638
          Length = 638

 Score =  174 bits (441), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 216/461 (46%), Gaps = 28/461 (6%)

Query: 252 SFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM 311
           S  +I+S+  + G     +    K +   ++P L  F  ++        +K+A E+L+EM
Sbjct: 136 SMVMILSKMRQFGAVWGLIEEMRKTNPELIEPEL--FVVLMRRFASANMVKKAVEVLDEM 193

Query: 312 VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK 371
              G +P+ Y    L+D LCK G  ++A ++F  +   E   PN+  +T+++ G+CR+ K
Sbjct: 194 PKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM--REKFPPNLRYFTSLLYGWCREGK 251

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
           L  A+ +L +MKE GL P+   +T L+ G+  AG    A+DLMN M + GF PN+  Y  
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311

Query: 432 IVDGLCK-KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
           ++  LC+ + R+ EA ++  +    G EAD VTY  LIS  CK   I +  ++   M K 
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           G+ P   +Y  ++    ++++  E     E+  R G  P    Y  +I   C+ G +  A
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEA 431

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
           ++ ++ M  +G  P    +  +I+G   Q  L EA   +  M+ +G+          A +
Sbjct: 432 VRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFS--------APQ 483

Query: 611 YCKIDDCCSAMVILDRLE--KKLW-------------IRTATTLVRKLCSERKVGMAALF 655
           Y  +    + +V  D+LE  K +W             +   T  +  L ++  V  A  +
Sbjct: 484 YGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSY 543

Query: 656 FHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSARIYK 696
              +++MD      T A  M    +     + ++++ ++ K
Sbjct: 544 CLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVK 584



 Score =  162 bits (410), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 249/529 (47%), Gaps = 52/529 (9%)

Query: 67  QHTHMRVSPPRLHLSIDPDSLTHEQA-VTTVASLAGNAGSMVALSFFHWAIGYSRFRHFM 125
           ++ H RV  P+L L+++   +      +  V S  G+AG++    FF WA     + H  
Sbjct: 75  RNHHSRV--PKLELALNESGIDLRPGLIIRVLSRCGDAGNL-GYRFFLWATKQPGYFH-- 129

Query: 126 RLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMH--NQGMVPNTQTL 183
                             ++EV + MV   +++ +      ++ EM   N  ++   +  
Sbjct: 130 ------------------SYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELI-EPELF 170

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
            ++M+      +V  A  + +EM   G+ PD   +  ++ A CK G+V EA K    M +
Sbjct: 171 VVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE 230

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ 303
           + F  +   FT ++  +C +G    A     +  + GL+P+++ FT+++ G    G +  
Sbjct: 231 K-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD 289

Query: 304 AFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK----AFRLFLKLVRSENNKPNVLTY 359
           A++++ +M  +G++PNV  +T LI  LC+   TEK    A R+F+++ R    + +++TY
Sbjct: 290 AYDLMNDMRKRGFEPNVNCYTVLIQALCR---TEKRMDEAMRVFVEMERY-GCEADIVTY 345

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
           TA+I+G+C+   +++   +L  M+++G++P+  TY  ++  H K   FE   +L+  M R
Sbjct: 346 TALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKR 405

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
            G  P++  YN ++   CK G V+EA ++  +   NGL     T+ I+I+    Q  + +
Sbjct: 406 RGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIE 465

Query: 480 ALALFSKMAKSGI--QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT---- 533
           A   F +M   GI   P   +  +L+    R+ ++  ++        +  I  K +    
Sbjct: 466 ACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV------WSCISNKTSSCEL 519

Query: 534 ----YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
               +T  I     +G++  A  +   M +   +P    Y  L+ GL K
Sbjct: 520 NVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568


>AT4G26800.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr4:13490251-13491458 FORWARD
           LENGTH=369
          Length = 369

 Score =  173 bits (439), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 186/360 (51%), Gaps = 4/360 (1%)

Query: 168 VFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCK 227
           + +M   G+ P+  T + ++   C    +  A Y+  +M   G+  D     +++   CK
Sbjct: 1   MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60

Query: 228 MGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLIN 287
              V+ A + L  M DRG   +  +++ +I+  C+ G    A R  H+     + PN+I 
Sbjct: 61  NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           F+++I+   KRG + +   + + M+     PNV+T+++LI GLC     ++A ++ L L+
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM-LDLM 179

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
            S+   PNV+TY+ + NG+ +  +++    LL  M ++G+  NT +  TLI G+ +AG  
Sbjct: 180 ISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI 239

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           + A  +   M+  G  PNI +YN ++ GL   G V++A    +       + D +TY I+
Sbjct: 240 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIM 299

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM---FFEEAVR 524
           I   CK   +K+A  LF K+    ++PD  +YT +IA   R    +E++    F+++ VR
Sbjct: 300 IHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVR 359



 Score =  159 bits (401), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 152/315 (48%), Gaps = 1/315 (0%)

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           K   +G++P+++  +S++ G C   SIK A  +  +M   G K +V   T LID LCK  
Sbjct: 3   KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
               A  + LK ++     PNV+TY+++I G C+  +L  AE  L  M  + + PN  T+
Sbjct: 63  LVVPALEV-LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
           + LID + K G   +   +  +M +    PN+ TY++++ GLC   RV EA KML     
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
            G   + VTY+ L +   K + +   + L   M + G+  +  S  TLI  + +  ++  
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
           +   F      G IP  R+Y  ++ G    G +  A+  F  M       D I Y  +I 
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 301

Query: 575 GLCKQSKLDEARGLY 589
           G+CK   + EA  L+
Sbjct: 302 GMCKACMVKEAYDLF 316



 Score =  140 bits (352), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 166/341 (48%), Gaps = 7/341 (2%)

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           +P+++T ++++NG+C  + +  A  + G+M++ G+  +    T LID  CK      A +
Sbjct: 10  EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           ++  M   G SPN+ TY++++ GLCK GR+ +A + L +     +  + +T++ LI  + 
Sbjct: 70  VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           K+  + +  +++  M +  I P++ +Y++LI   C   R+ E+    +  +  G  P   
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           TY+++  G+ +   +   IK    M   G   ++++  TLI G  +  K+D A G++  M
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249

Query: 593 IEKGLIP-CEVTRITLA--YEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKV 649
              GLIP      I LA  +   +++   S    + +    L I T T ++  +C    V
Sbjct: 250 TSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 309

Query: 650 GMAALFFHKL----LDMDFHVNRVTLAAFMTACYESNKYAL 686
             A   F+KL    ++ DF    + +A    A   +   AL
Sbjct: 310 KEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350



 Score =  139 bits (349), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 153/320 (47%), Gaps = 1/320 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V  F     +K+AV +  +M   G+  +     +++   C+  LV  A  + + M  RG
Sbjct: 19  LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 78

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P+  +Y  ++   CK G + +A++ L  M  +    +  +F+ +I  + ++G  ++  
Sbjct: 79  ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             +     M + PN+  ++S+I GLC    + +A +ML+ M+ +G  PNV T++ L +G 
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K    +   +L L  +       N ++   +I GY +  K++ A  + G M   GLIPN
Sbjct: 199 FKSSRVDDGIKL-LDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPN 257

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             +Y  ++ G    G  E+A      M +     +I TY  ++ G+CK   V+EAY +  
Sbjct: 258 IRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFY 317

Query: 451 DGFHNGLEADKVTYNILISE 470
                 +E D   Y I+I+E
Sbjct: 318 KLKFKRVEPDFKAYTIMIAE 337



 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 115/231 (49%)

Query: 381 RMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
           +M + G+ P+  T ++L++G C + + + A  +   M + G   ++     ++D LCK  
Sbjct: 3   KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
            V  A ++LK     G+  + VTY+ LI+  CK   +  A     +M    I P++ +++
Sbjct: 63  LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
            LI  + +  ++S+ +  ++  ++    P   TY+S+I G C    +  AIK    M   
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEY 611
           GC P+ + Y TL +G  K S++D+   L D M ++G+    V+  TL   Y
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233



 Score =  107 bits (266), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 105/214 (49%)

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           M + G  P+I T +++V+G C    +++A  +       G++ D V   ILI   CK   
Sbjct: 4   MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
           +  AL +  +M   GI P++ +Y++LI   C+  R++++E    E       P   T+++
Sbjct: 64  VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           +I  Y + G L+     +  M      P+   Y +LI GLC  +++DEA  + D MI KG
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183

Query: 597 LIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
             P  VT  TLA  + K       + +LD + ++
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 217



 Score = 70.1 bits (170), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 3/198 (1%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R+ EA++M+  M ++G  PN  T + +     +   VD    L ++M  RGV  ++ S  
Sbjct: 168 RVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCN 227

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            ++  Y + G +  A      M   G + +  S+ ++++     G   +AL  F      
Sbjct: 228 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKT 287

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
               ++I +T MI G+CK   +K+A+++  ++  +  +P+   +T +I  L + G   +A
Sbjct: 288 RNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347

Query: 340 ---FRLFLKLVRSENNKP 354
               R + K VR   + P
Sbjct: 348 DALNRFYQKHVRQNESAP 365


>AT5G42310.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr5:16915860-16918238 FORWARD
           LENGTH=709
          Length = 709

 Score =  172 bits (437), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 188/383 (49%), Gaps = 1/383 (0%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
            ++ + A+ GR  EA  +  E+   G+ P T+  N ++K   + G +  A+ +  EM  R
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           GV PD  +Y +++ AY   G    A   L  M       ++  F+ +++ F ++G   + 
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
            +   +   +G+KP+   +  +I+   K   +  A    + M+ +G +P+  T   LID 
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
            CK G    A  +F  + R     P   TY  MIN Y   ++ +  + LLG+MK QG++P
Sbjct: 489 HCKHGRHIVAEEMFEAMER-RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 547

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           N  T+TTL+D + K+G F  A + +  M   G  P+   YNA+++   ++G  ++A    
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
           +    +GL+   +  N LI+   +     +A A+   M ++G++PD+ +YTTL+    R 
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV 667

Query: 510 KRMSESEMFFEEAVRFGFIPTKR 532
            +  +  + +EE +  G  P ++
Sbjct: 668 DKFQKVPVVYEEMIMSGCKPDRK 690



 Score =  171 bits (433), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 211/469 (44%), Gaps = 3/469 (0%)

Query: 161 LKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYL--FEEMSARGVHPDSASY 218
           +++A+ ++ +M   G   +    +LV++       +D    L  ++E+    +  D    
Sbjct: 213 IEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLV 272

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             +++ + K G+  +A + L +    G     A+   IIS   + G    A   F +   
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
            G+KP    + ++++G  K G +K A  M+ EM  +G  P+ +T++ LID     G  E 
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A R+ LK + + + +PN   ++ ++ G+    +  +   +L  MK  G+ P+   Y  +I
Sbjct: 393 A-RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
           D   K    + A    + M  EG  P+  T+N ++D  CK GR   A +M +     G  
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
               TYNI+I+ +  Q        L  KM   GI P++ ++TTL+ V+ +  R +++   
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
            EE    G  P+   Y ++I  Y + G    A+  F  M+  G  P  +A  +LI+   +
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631

Query: 579 QSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
             +  EA  +   M E G+ P  VT  TL     ++D      V+ + +
Sbjct: 632 DRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680



 Score =  169 bits (429), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 204/431 (47%), Gaps = 1/431 (0%)

Query: 146 EVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEE 205
           +++  ++  FA+ G   +A++++      G+   T TL  ++    + G    A+ LFEE
Sbjct: 270 QLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEE 329

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           +   G+ P + +Y  ++  Y K G + +A+  +S M  RG   D  +++L+I  +   G 
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
              A     +     ++PN   F+ ++ G   RG  ++ F++L+EM   G KP+   +  
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 449

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           +ID   K    + A   F +++ SE  +P+ +T+  +I+ +C+  +   AE +   M+ +
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRML-SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           G +P   TY  +I+ +     ++    L+  M  +G  PN+ T+  +VD   K GR  +A
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 568

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            + L++    GL+     YN LI+ + ++   +QA+  F  M   G++P + +  +LI  
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           F  ++R +E+    +     G  P   TYT+++    R          +  M   GC PD
Sbjct: 629 FGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688

Query: 566 SIAYGTLISGL 576
             A   L S L
Sbjct: 689 RKARSMLRSAL 699



 Score =  138 bits (348), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 191/431 (44%), Gaps = 39/431 (9%)

Query: 217 SYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCE--KGFATRALRYFH 274
           +Y  ++ A  +  ++ +A   ++ M   G+  D  +++L+I       K  +   LR + 
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           +     L+ ++     +I G  K G   +A ++L      G      T  ++I  L   G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
            T +A  LF +L R    KP    Y A++ GY +   L  AE ++  M+++G+ P+ +TY
Sbjct: 319 RTLEAEALFEEL-RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
           + LID +  AG +E A  ++  M      PN   ++ ++ G   +G  Q+ +++LK+   
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
            G++ D+  YN++I    K   +  A+  F +M   GI+PD                   
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD------------------- 478

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
                           + T+ ++I  +C+ G   +A + F  M   GC+P +  Y  +I+
Sbjct: 479 ----------------RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522

Query: 575 GLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR 634
               Q + D+ + L   M  +G++P  VT  TL   Y K      A+  L+ + K + ++
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM-KSVGLK 581

Query: 635 TATTLVRKLCS 645
            ++T+   L +
Sbjct: 582 PSSTMYNALIN 592



 Score =  129 bits (325), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 145/287 (50%), Gaps = 1/287 (0%)

Query: 139 GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           G++Q    V   ++  F + G  ++  +++ EM + G+ P+ Q  N+V+    +   +D+
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
           A   F+ M + G+ PD  ++  ++  +CK G  + A++    M  RG L    ++ ++I+
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
            + ++       R   K    G+ PN++  T++++   K G    A E LEEM   G KP
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
           +   + ALI+   ++G +E+A   F +++ S+  KP++L   ++IN +  D +   A  +
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAF-RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAV 641

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPN 425
           L  MKE G+ P+  TYTTL+    +   F++   +   M   G  P+
Sbjct: 642 LQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688



 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 7/204 (3%)

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           Y+ ++  L +  ++ EA+ + +      L     TYN LI    +  DI++AL L +KM 
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQTLTPL-----TYNALIGACARNNDIEKALNLIAKMR 224

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEM--FFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           + G Q D  +Y+ +I    R  ++    +   ++E  R       +    +I G+ + G+
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284

Query: 547 LTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRIT 606
            + A++        G    +    ++IS L    +  EA  L++ + + G+ P       
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344

Query: 607 LAYEYCKIDDCCSAMVILDRLEKK 630
           L   Y K      A  ++  +EK+
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKR 368


>AT5G46680.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr5:18941118-18942524 FORWARD
           LENGTH=468
          Length = 468

 Score =  172 bits (435), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 207/433 (47%), Gaps = 9/433 (2%)

Query: 179 NTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL 238
           +T+ LN+ +   C+   ++ A+ L  +    GV PD  +Y  ++  Y +   + EA    
Sbjct: 12  STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVT 71

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
             M + G   D  ++  +IS   +     R L+ F +    GL P++ ++ +++    K 
Sbjct: 72  RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131

Query: 299 GSIKQAFEML-EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
           G   +AF++L E++   G  P + T+  L+D LCK G T+ A  LF  L      KP ++
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL--KSRVKPELM 189

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           TY  +ING C+  ++   + ++  +K+ G  PN  TYTT++  + K    E+   L   M
Sbjct: 190 TYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA-DKVTYNILISEHCKQAD 476
            +EG++ +     A+V  L K GR +EAY+ + +   +G  + D V+YN L++ + K  +
Sbjct: 250 KKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN 309

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
           +     L  ++   G++PD +++T ++           +E         G  P+  T   
Sbjct: 310 LDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNC 369

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           +I G C+ G++  A++ F  M     V D   Y +++  LCK  +L  A  L  S   KG
Sbjct: 370 LIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKG 425

Query: 597 L-IPCEVTRITLA 608
           + IP    R  L+
Sbjct: 426 MKIPSSARRAVLS 438



 Score =  129 bits (325), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 165/379 (43%), Gaps = 41/379 (10%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +++ +     + EA  +   M   G+ P+  T N ++  A +  +++    LF+EM   G
Sbjct: 54  LIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSG 113

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNA-SFTLIISEFCEKGFATRA 269
           + PD  SY  ++  Y K+G   EA K L   +    LV    ++ +++   C+ G    A
Sbjct: 114 LSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNA 173

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHT----- 324
           +  F       +KP L+ +  +I GLCK   +     M+ E+   G+ PN  T+T     
Sbjct: 174 IELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKM 232

Query: 325 ------------------------------ALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
                                         A++  L K G  E+A+    +LVRS     
Sbjct: 233 YFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQ 292

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           ++++Y  ++N Y +D  L+  + LL  ++ +GL P+  T+T +++G    GN   A   +
Sbjct: 293 DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
             +   G  P++ T N ++DGLCK G V  A ++    F +    D+ TY  ++   CK 
Sbjct: 353 ACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL----FASMEVRDEFTYTSVVHNLCKD 408

Query: 475 ADIKQALALFSKMAKSGIQ 493
             +  A  L       G++
Sbjct: 409 GRLVCASKLLLSCYNKGMK 427



 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 114/238 (47%), Gaps = 4/238 (1%)

Query: 377 MLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGL 436
           M+ G MK  G+  +T      ++  CK  N ERA  L+    R G  P++ TYN ++ G 
Sbjct: 1   MVRGLMKFPGI--STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGY 58

Query: 437 CKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI 496
            +   + EAY + +     G+E D  TYN LIS   K   + + L LF +M  SG+ PD+
Sbjct: 59  TRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDM 118

Query: 497 HSYTTLIAVFCREKRMSESEMFFEEAVRF-GFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
            SY TL++ + +  R  E+     E +   G +P   TY  ++   C+ G+   AI+ F 
Sbjct: 119 WSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK 178

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
            +      P+ + Y  LI+GLCK  ++     +   + + G  P  VT  T+   Y K
Sbjct: 179 HLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFK 235



 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 146/330 (44%), Gaps = 43/330 (13%)

Query: 155 FAEIGRLKEAVEMVFE-MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHP 213
           + ++GR  EA +++ E +H  G+VP   T N+++   C+ G  D A  LF+ + +R V P
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKP 186

Query: 214 DSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL------------------ 255
           +  +Y +++   CK   V   D  +  +   G+  +  ++T                   
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 246

Query: 256 -----------------IISEFCEKGFATRALRYFHKFSDMGLKP-NLINFTSMIEGLCK 297
                            ++S   + G A  A    H+    G +  +++++ +++    K
Sbjct: 247 LKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFK 306

Query: 298 RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
            G++    ++LEE+  +G KP+ YTHT +++GL   G T  A +  L  +     +P+V+
Sbjct: 307 DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEK-HLACIGEMGMQPSVV 365

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           T   +I+G C+   ++RA  L   M+    + +  TYT+++   CK G    A  L+   
Sbjct: 366 TCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSC 421

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
             +G         A++ G+ +    Q A K
Sbjct: 422 YNKGMKIPSSARRAVLSGIRETVSYQAARK 451



 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 3/222 (1%)

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           NI ++  CK  ++++A  L     + G+ PD+ +Y TLI  + R   + E+         
Sbjct: 17  NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
            G  P   TY S+I G  +   L   ++ F  M   G  PD  +Y TL+S   K  +  E
Sbjct: 77  AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136

Query: 585 A-RGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKL--WIRTATTLVR 641
           A + L++ +   GL+P   T   L    CK     +A+ +   L+ ++   + T   L+ 
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILIN 196

Query: 642 KLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNK 683
            LC  R+VG       +L    +  N VT    +   +++ +
Sbjct: 197 GLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKR 238


>AT1G13800.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:4731056-4733707 REVERSE
           LENGTH=883
          Length = 883

 Score =  171 bits (434), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 233/555 (41%), Gaps = 75/555 (13%)

Query: 161 LKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRV 220
           + +AV++  +M  +    N   ++ +++  C+MG    A  LF+E     +  D   Y V
Sbjct: 342 IPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNV 401

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
              A  K+G V EA +    M  +G   D  ++T +I   C +G  + A     +    G
Sbjct: 402 AFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF 340
             P+++ +  +  GL   G  ++AFE L+ M  +G KP   TH  +I+GL   G  +KA 
Sbjct: 462 KTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAE 521

Query: 341 RL----------------------------FLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
                                         F + +R E   P  + +T   +     D +
Sbjct: 522 AFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYI 581

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
           ++A+ LL RM + G+ P  + Y  LI   C+  N  +A +   ++  +   P++ TY  +
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIM 641

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL------------------------- 467
           ++  C+    ++AY + +D     ++ D VTY++L                         
Sbjct: 642 INTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYY 701

Query: 468 ---ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
              I+ +C   D+K+  ALF  M +  I PD+ +YT L+      K   E  +   E   
Sbjct: 702 TIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL------KNKPERNL-SREMKA 754

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
           F   P    YT +I   C+ G+L  A + F +M + G  PD+  Y  LI+  CK   L E
Sbjct: 755 FDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKE 814

Query: 585 ARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLC 644
           A+ ++D MIE G+ P  V    L      I  CC    +L        ++    ++ K  
Sbjct: 815 AKMIFDRMIESGVKPDVVPYTAL------IAGCCRNGFVLKA------VKLVKEMLEKGI 862

Query: 645 SERKVGMAALFFHKL 659
              K  ++A+ + KL
Sbjct: 863 KPTKASLSAVHYAKL 877



 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 115/499 (23%), Positives = 207/499 (41%), Gaps = 35/499 (7%)

Query: 177 VPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVM--------------- 221
           +P+ Q    V++I C  GL         E+  RG   +   + VM               
Sbjct: 87  LPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRG--DEGRGFSVMDLLKAIGEMEQSLVL 144

Query: 222 --------VVAYCKMGNVLEA-DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRY 272
                   V AY  +    EA D +       G   D  +   +IS     G +   + +
Sbjct: 145 LIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGF 204

Query: 273 FHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCK 332
           F +   +GL  +   +  +++ L +    ++  ++L  ++    +     +   I+GLC 
Sbjct: 205 FWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCL 264

Query: 333 KGWTEKAFRLFLKLVRSEN---NKPNV-LTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
              T+ A+ L L+ +R  N   +K ++ + Y  ++ G C + ++  AE ++  M++ G+ 
Sbjct: 265 NQMTDIAYFL-LQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGID 323

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           P+   Y+ +I+GH K  N  +A D+ N M ++    N    ++I+   C+ G   EAY +
Sbjct: 324 PDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDL 383

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
            K+     +  D+V YN+      K   +++A+ LF +M   GI PD+ +YTTLI   C 
Sbjct: 384 FKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCL 443

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
           + + S++     E    G  P    Y  +  G    G    A +    M + G  P  + 
Sbjct: 444 QGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVT 503

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLE 628
           +  +I GL    +LD+A   Y+S+  K          ++   +C       A     RLE
Sbjct: 504 HNMVIEGLIDAGELDKAEAFYESLEHKS----RENDASMVKGFCAAGCLDHAFERFIRLE 559

Query: 629 KKLWIRTATTLVRKLCSER 647
             L      TL   LC+E+
Sbjct: 560 FPLPKSVYFTLFTSLCAEK 578



 Score = 87.0 bits (214), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 7/176 (3%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+  +  +  LK+   +  +M  + +VP+  T  +++K   E  L         EM A  
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLS-------REMKAFD 756

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V PD   Y V++   CK+G++ EA +    M++ G   D A +T +I+  C+ G+   A 
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             F +  + G+KP+++ +T++I G C+ G + +A ++++EM+ +G KP   + +A+
Sbjct: 817 MIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872


>AT4G26680.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:13454853-13456418 FORWARD
           LENGTH=521
          Length = 521

 Score =  167 bits (424), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 181/391 (46%), Gaps = 34/391 (8%)

Query: 106 MVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQ---------------- 149
           +++L FF+WA   +   H +  + +   +L  N   + A  +++                
Sbjct: 96  LLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFD 155

Query: 150 -----------------CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACE 192
                             + ++FA + + + A +   +M + G +P  ++ N  M     
Sbjct: 156 ALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG 215

Query: 193 MGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNAS 252
            G VD A   + EM    + P+  +  +++  YC+ G + +  + L  M   GF   + S
Sbjct: 216 QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS 275

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           +  +I+  CEKG  + AL+  +     GL+PN++ F ++I G C+   +++A ++  EM 
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
                PN  T+  LI+G  ++G  E AFR +  +V     + ++LTY A+I G C+  K 
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV-CNGIQRDILTYNALIFGLCKQAKT 394

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
            +A   +  + ++ L+PN++T++ LI G C   N +R F+L   M R G  PN  T+N +
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
           V   C+      A ++L++     +  D  T
Sbjct: 455 VSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485



 Score =  163 bits (412), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 2/314 (0%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           F S+ +        + A +   +M   G+ P V +  A +  L  +G  + A R + ++ 
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
           R + + PN  T   +++GYCR  KL++   LL  M+  G      +Y TLI GHC+ G  
Sbjct: 231 RCKIS-PNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
             A  L N+M + G  PN+ T+N ++ G C+  ++QEA K+  +     +  + VTYN L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           I+ + +Q D + A   +  M  +GIQ DI +Y  LI   C++ +  ++  F +E  +   
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
           +P   T++++I G C   N     + +  M   GC P+   +  L+S  C+    D A  
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469

Query: 588 LYDSMIEKGLIPCE 601
           +   M+ +  IP +
Sbjct: 470 VLREMVRRS-IPLD 482



 Score =  160 bits (404), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 1/317 (0%)

Query: 241 MLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGS 300
           M D GFL    S    +S    +G    ALR++ +     + PN      ++ G C+ G 
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253

Query: 301 IKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYT 360
           + +  E+L++M   G++    ++  LI G C+KG    A +L   ++     +PNV+T+ 
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL-KNMMGKSGLQPNVVTFN 312

Query: 361 AMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE 420
            +I+G+CR  KL  A  + G MK   + PNT TY TLI+G+ + G+ E AF     M   
Sbjct: 313 TLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN 372

Query: 421 GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
           G   +I TYNA++ GLCK+ + ++A + +K+     L  +  T++ LI   C + +  + 
Sbjct: 373 GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
             L+  M +SG  P+  ++  L++ FCR +    +     E VR       RT   +  G
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492

Query: 541 YCREGNLTMAIKFFHRM 557
              +G   +  K    M
Sbjct: 493 LKHQGKDQLVKKLLQEM 509



 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 2/275 (0%)

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
           K F   L   R  ++ P V  + ++   +    K   A     +MK+ G +P   +    
Sbjct: 152 KVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAY 209

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           +      G  + A      M R   SPN  T N ++ G C+ G++ +  ++L+D    G 
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
            A  V+YN LI+ HC++  +  AL L + M KSG+QP++ ++ TLI  FCR  ++ E+  
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
            F E       P   TY ++I GY ++G+  MA +F+  M  +G   D + Y  LI GLC
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389

Query: 578 KQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYC 612
           KQ+K  +A      + ++ L+P   T   L    C
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424



 Score =  135 bits (340), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 145/326 (44%), Gaps = 1/326 (0%)

Query: 273 FHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCK 332
           F +  D G  P + +  + +  L  +G +  A     EM      PN YT   ++ G C+
Sbjct: 191 FMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCR 250

Query: 333 KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
            G  +K   L   + R      +V +Y  +I G+C    L+ A  L   M + GL PN  
Sbjct: 251 SGKLDKGIELLQDMERLGFRATDV-SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVV 309

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG 452
           T+ TLI G C+A   + A  +   M     +PN  TYN +++G  ++G  + A++  +D 
Sbjct: 310 TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
             NG++ D +TYN LI   CKQA  ++A     ++ K  + P+  +++ LI   C  K  
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
                 ++  +R G  P ++T+  ++  +CR  +   A +    M       DS     +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLI 598
            +GL  Q K    + L   M  K  +
Sbjct: 490 CNGLKHQGKDQLVKKLLQEMEGKKFL 515



 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 138/292 (47%), Gaps = 1/292 (0%)

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           P V +  A ++      +++ A      M+   + PN  T   ++ G+C++G  ++  +L
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
           +  M R GF     +YN ++ G C+KG +  A K+      +GL+ + VT+N LI   C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
              +++A  +F +M    + P+  +Y TLI  + ++     +  F+E+ V  G      T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380

Query: 534 YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
           Y ++I G C++     A +F   +     VP+S  +  LI G C +   D    LY SMI
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440

Query: 594 EKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCS 645
             G  P E T   L   +C+ +D   A  +L  + ++  I   +  V ++C+
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR-SIPLDSRTVHQVCN 491



 Score = 93.2 bits (230), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 3/274 (1%)

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
           F  A D    M   GF P + + NA +  L  +GRV  A +  ++     +  +  T N+
Sbjct: 184 FRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNM 243

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           ++S +C+   + + + L   M + G +    SY TLIA  C +  +S +        + G
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSG 303

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
             P   T+ ++I G+CR   L  A K F  M      P+++ Y TLI+G  +Q   + A 
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAF 363

Query: 587 GLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKL 643
             Y+ M+  G+    +T   L +  CK      A   +  L+K+  +  ++T   L+   
Sbjct: 364 RFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423

Query: 644 CSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
           C  +        +  ++    H N  T    ++A
Sbjct: 424 CVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457



 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 2/202 (0%)

Query: 134 SLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM 193
           +++G   LQ        ++  F    +L+EA ++  EM    + PNT T N ++    + 
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNAS- 252
           G  + A   +E+M   G+  D  +Y  ++   CK     +A +++   LD+  LV N+S 
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK-ELDKENLVPNSST 415

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           F+ +I   C +  A R    +      G  PN   F  ++   C+      A ++L EMV
Sbjct: 416 FSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475

Query: 313 CQGWKPNVYTHTALIDGLCKKG 334
            +    +  T   + +GL  +G
Sbjct: 476 RRSIPLDSRTVHQVCNGLKHQG 497



 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 87/202 (43%), Gaps = 7/202 (3%)

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS 558
           + +L   F   K+   +   F +   +GF+PT  +  + +     +G + +A++F+  M 
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230

Query: 559 DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCC 618
                P+      ++SG C+  KLD+   L   M   G    +V+  TL   +C+     
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290

Query: 619 SAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
           SA+ + + + K   +  + T  TL+   C   K+  A+  F ++  ++   N VT    +
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350

Query: 676 TACYESNKYALVSDLSARIYKD 697
               +   +    +++ R Y+D
Sbjct: 351 NGYSQQGDH----EMAFRFYED 368


>AT4G26680.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:13454853-13456418 FORWARD
           LENGTH=521
          Length = 521

 Score =  167 bits (424), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 181/391 (46%), Gaps = 34/391 (8%)

Query: 106 MVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQ---------------- 149
           +++L FF+WA   +   H +  + +   +L  N   + A  +++                
Sbjct: 96  LLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFD 155

Query: 150 -----------------CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACE 192
                             + ++FA + + + A +   +M + G +P  ++ N  M     
Sbjct: 156 ALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG 215

Query: 193 MGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNAS 252
            G VD A   + EM    + P+  +  +++  YC+ G + +  + L  M   GF   + S
Sbjct: 216 QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS 275

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           +  +I+  CEKG  + AL+  +     GL+PN++ F ++I G C+   +++A ++  EM 
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
                PN  T+  LI+G  ++G  E AFR +  +V     + ++LTY A+I G C+  K 
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV-CNGIQRDILTYNALIFGLCKQAKT 394

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
            +A   +  + ++ L+PN++T++ LI G C   N +R F+L   M R G  PN  T+N +
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
           V   C+      A ++L++     +  D  T
Sbjct: 455 VSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485



 Score =  163 bits (412), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 2/314 (0%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           F S+ +        + A +   +M   G+ P V +  A +  L  +G  + A R + ++ 
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
           R + + PN  T   +++GYCR  KL++   LL  M+  G      +Y TLI GHC+ G  
Sbjct: 231 RCKIS-PNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
             A  L N+M + G  PN+ T+N ++ G C+  ++QEA K+  +     +  + VTYN L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           I+ + +Q D + A   +  M  +GIQ DI +Y  LI   C++ +  ++  F +E  +   
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
           +P   T++++I G C   N     + +  M   GC P+   +  L+S  C+    D A  
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469

Query: 588 LYDSMIEKGLIPCE 601
           +   M+ +  IP +
Sbjct: 470 VLREMVRRS-IPLD 482



 Score =  160 bits (404), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 1/317 (0%)

Query: 241 MLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGS 300
           M D GFL    S    +S    +G    ALR++ +     + PN      ++ G C+ G 
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253

Query: 301 IKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYT 360
           + +  E+L++M   G++    ++  LI G C+KG    A +L   ++     +PNV+T+ 
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL-KNMMGKSGLQPNVVTFN 312

Query: 361 AMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE 420
            +I+G+CR  KL  A  + G MK   + PNT TY TLI+G+ + G+ E AF     M   
Sbjct: 313 TLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN 372

Query: 421 GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
           G   +I TYNA++ GLCK+ + ++A + +K+     L  +  T++ LI   C + +  + 
Sbjct: 373 GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
             L+  M +SG  P+  ++  L++ FCR +    +     E VR       RT   +  G
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492

Query: 541 YCREGNLTMAIKFFHRM 557
              +G   +  K    M
Sbjct: 493 LKHQGKDQLVKKLLQEM 509



 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 2/275 (0%)

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
           K F   L   R  ++ P V  + ++   +    K   A     +MK+ G +P   +    
Sbjct: 152 KVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAY 209

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           +      G  + A      M R   SPN  T N ++ G C+ G++ +  ++L+D    G 
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
            A  V+YN LI+ HC++  +  AL L + M KSG+QP++ ++ TLI  FCR  ++ E+  
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
            F E       P   TY ++I GY ++G+  MA +F+  M  +G   D + Y  LI GLC
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389

Query: 578 KQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYC 612
           KQ+K  +A      + ++ L+P   T   L    C
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424



 Score =  135 bits (340), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 145/326 (44%), Gaps = 1/326 (0%)

Query: 273 FHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCK 332
           F +  D G  P + +  + +  L  +G +  A     EM      PN YT   ++ G C+
Sbjct: 191 FMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCR 250

Query: 333 KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
            G  +K   L   + R      +V +Y  +I G+C    L+ A  L   M + GL PN  
Sbjct: 251 SGKLDKGIELLQDMERLGFRATDV-SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVV 309

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG 452
           T+ TLI G C+A   + A  +   M     +PN  TYN +++G  ++G  + A++  +D 
Sbjct: 310 TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
             NG++ D +TYN LI   CKQA  ++A     ++ K  + P+  +++ LI   C  K  
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
                 ++  +R G  P ++T+  ++  +CR  +   A +    M       DS     +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLI 598
            +GL  Q K    + L   M  K  +
Sbjct: 490 CNGLKHQGKDQLVKKLLQEMEGKKFL 515



 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 138/292 (47%), Gaps = 1/292 (0%)

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           P V +  A ++      +++ A      M+   + PN  T   ++ G+C++G  ++  +L
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
           +  M R GF     +YN ++ G C+KG +  A K+      +GL+ + VT+N LI   C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
              +++A  +F +M    + P+  +Y TLI  + ++     +  F+E+ V  G      T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380

Query: 534 YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
           Y ++I G C++     A +F   +     VP+S  +  LI G C +   D    LY SMI
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440

Query: 594 EKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCS 645
             G  P E T   L   +C+ +D   A  +L  + ++  I   +  V ++C+
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR-SIPLDSRTVHQVCN 491



 Score = 93.2 bits (230), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 3/274 (1%)

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
           F  A D    M   GF P + + NA +  L  +GRV  A +  ++     +  +  T N+
Sbjct: 184 FRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNM 243

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           ++S +C+   + + + L   M + G +    SY TLIA  C +  +S +        + G
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSG 303

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
             P   T+ ++I G+CR   L  A K F  M      P+++ Y TLI+G  +Q   + A 
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAF 363

Query: 587 GLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKL 643
             Y+ M+  G+    +T   L +  CK      A   +  L+K+  +  ++T   L+   
Sbjct: 364 RFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423

Query: 644 CSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
           C  +        +  ++    H N  T    ++A
Sbjct: 424 CVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457



 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 2/202 (0%)

Query: 134 SLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM 193
           +++G   LQ        ++  F    +L+EA ++  EM    + PNT T N ++    + 
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNAS- 252
           G  + A   +E+M   G+  D  +Y  ++   CK     +A +++   LD+  LV N+S 
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK-ELDKENLVPNSST 415

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           F+ +I   C +  A R    +      G  PN   F  ++   C+      A ++L EMV
Sbjct: 416 FSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475

Query: 313 CQGWKPNVYTHTALIDGLCKKG 334
            +    +  T   + +GL  +G
Sbjct: 476 RRSIPLDSRTVHQVCNGLKHQG 497



 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 87/202 (43%), Gaps = 7/202 (3%)

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS 558
           + +L   F   K+   +   F +   +GF+PT  +  + +     +G + +A++F+  M 
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230

Query: 559 DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCC 618
                P+      ++SG C+  KLD+   L   M   G    +V+  TL   +C+     
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290

Query: 619 SAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
           SA+ + + + K   +  + T  TL+   C   K+  A+  F ++  ++   N VT    +
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350

Query: 676 TACYESNKYALVSDLSARIYKD 697
               +   +    +++ R Y+D
Sbjct: 351 NGYSQQGDH----EMAFRFYED 368


>AT5G46100.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:18694316-18695734 REVERSE
           LENGTH=472
          Length = 472

 Score =  166 bits (421), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 168/343 (48%), Gaps = 10/343 (2%)

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           +LR FHK  D    P+   + +++  L +   +  AF+  + M   G  P V +   LI 
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164

Query: 329 GLCKK-GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
            LC+  G  +   ++FL++ +     P+  TY  +I+G CR  +++ A+ L   M E+  
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPK-RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            P   TYT+LI+G C + N + A   +  M  +G  PN+ TY++++DGLCK GR  +A +
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           + +     G   + VTY  LI+  CK+  I++A+ L  +M   G++PD   Y  +I+ FC
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343

Query: 508 REKRMSESEMFFEEAVRFGFIPTK-------RTYTSMICGYCREGNLTMAIKFFHRMSDH 560
              +  E+  F +E +  G  P +       +T   ++ G C     + A   +  M   
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSR 402

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
           G   +     +L+  LCK+ +  +A  L D ++  G IP + T
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGT 445



 Score =  163 bits (413), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 171/342 (50%), Gaps = 10/342 (2%)

Query: 252 SFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR-GSIKQAFEMLEE 310
           ++  +++   E+     A +++    ++GL P + +   +I+ LC+  G++    ++  E
Sbjct: 123 AYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLE 182

Query: 311 MVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDD 370
           M  +G  P+ YT+  LI GLC+ G  ++A +LF ++V  ++  P V+TYT++ING C   
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVE-KDCAPTVVTYTSLINGLCGSK 241

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
            ++ A   L  MK +G+ PN  TY++L+DG CK G   +A +L  +M   G  PN+ TY 
Sbjct: 242 NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            ++ GLCK+ ++QEA ++L      GL+ D   Y  +IS  C  +  ++A     +M   
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG 361

Query: 491 GIQPD-----IHSYTT--LIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCR 543
           GI P+     IH  T+  ++   C         ++     R G      T  S++   C+
Sbjct: 362 GITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSR-GISVEVETLESLVKCLCK 420

Query: 544 EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
           +G    A++    +   GC+P    +  LI     ++ + EA
Sbjct: 421 KGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEA 462



 Score =  163 bits (413), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 164/334 (49%), Gaps = 10/334 (2%)

Query: 155 FAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM-GLVDYAQYLFEEMSARGVHP 213
             E  +L  A +    M   G+ P   +LN+++K  C   G VD    +F EM  RG  P
Sbjct: 131 LVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDP 190

Query: 214 DSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYF 273
           DS +Y  ++   C+ G + EA K  + M+++       ++T +I+  C       A+RY 
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYL 250

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
            +    G++PN+  ++S+++GLCK G   QA E+ E M+ +G +PN+ T+T LI GLCK+
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN--- 390
              ++A  L L  +  +  KP+   Y  +I+G+C   K   A   L  M   G+ PN   
Sbjct: 311 QKIQEAVEL-LDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT 369

Query: 391 ----TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
                 T   ++ G C A    RAF L   M   G S  + T  ++V  LCKKG  Q+A 
Sbjct: 370 WNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAV 428

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
           +++ +   +G    K T+ +LI     +  + +A
Sbjct: 429 QLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEA 462



 Score =  158 bits (399), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 190/405 (46%), Gaps = 49/405 (12%)

Query: 144 AHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLF 203
           + +++  + R +  + R  +++ +  +M +    P+ +    V+ I  E   ++ A   +
Sbjct: 85  SEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFY 144

Query: 204 EEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEK 263
           + M   G+ P  AS  V++ A C+    ++A                             
Sbjct: 145 KNMREIGLPPTVASLNVLIKALCRNDGTVDA----------------------------- 175

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
                 L+ F +    G  P+   + ++I GLC+ G I +A ++  EMV +   P V T+
Sbjct: 176 -----GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
           T+LI+GLC     ++A R +L+ ++S+  +PNV TY+++++G C+D +  +A  L   M 
Sbjct: 231 TSLINGLCGSKNVDEAMR-YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
            +G  PN  TYTTLI G CK    + A +L++ M+ +G  P+   Y  ++ G C   + +
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFR 349

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQAD----------IKQALALFSKMAKSGIQ 493
           EA   L +    G+  +++T+NI    H K ++            +A  L+  M   GI 
Sbjct: 350 EAANFLDEMILGGITPNRLTWNI----HVKTSNEVVRGLCANYPSRAFTLYLSMRSRGIS 405

Query: 494 PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
            ++ +  +L+   C++    ++    +E V  G IP+K T+  +I
Sbjct: 406 VEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450



 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 144/308 (46%), Gaps = 10/308 (3%)

Query: 370 DKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNL---MSREGFSPNI 426
           +K   AE L+ RMK +  + + +   ++  G+   G   R FD + +   M      P+ 
Sbjct: 65  NKFKAAEDLIVRMKIENCVVSEDILLSICRGY---GRVHRPFDSLRVFHKMKDFDCDPSQ 121

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ-ADIKQALALFS 485
             Y  ++  L ++ ++  A+K  K+    GL     + N+LI   C+    +   L +F 
Sbjct: 122 KAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFL 181

Query: 486 KMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREG 545
           +M K G  PD ++Y TLI+  CR  R+ E++  F E V     PT  TYTS+I G C   
Sbjct: 182 EMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSK 241

Query: 546 NLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRI 605
           N+  A+++   M   G  P+   Y +L+ GLCK  +  +A  L++ M+ +G  P  VT  
Sbjct: 242 NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301

Query: 606 TLAYEYCKIDDCCSAMVILDRLEKKLWIRTA---TTLVRKLCSERKVGMAALFFHKLLDM 662
           TL    CK      A+ +LDR+  +     A     ++   C+  K   AA F  +++  
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG 361

Query: 663 DFHVNRVT 670
               NR+T
Sbjct: 362 GITPNRLT 369


>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
           chr2:13387201-13390550 REVERSE LENGTH=918
          Length = 918

 Score =  165 bits (418), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 202/455 (44%), Gaps = 24/455 (5%)

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
           + +IS     G  T A R F      G    +  F+++I    + G  ++A  +   M  
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
            G +PN+ T+ A+ID   K G   K    F   ++    +P+ +T+ +++    R     
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
            A  L   M  + +  +  +Y TL+D  CK G  + AF+++  M  +   PN+ +Y+ ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416

Query: 434 DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ 493
           DG  K GR  EA  +  +  + G+  D+V+YN L+S + K    ++AL +  +MA  GI+
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476

Query: 494 PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKF 553
            D+ +Y  L+  + ++ +  E +  F E  R   +P   TY+++I GY + G    A++ 
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536

Query: 554 FHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT--RITLAYEY 611
           F      G   D + Y  LI  LCK   +  A  L D M ++G+ P  VT   I  A+  
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596

Query: 612 CKIDD-------------CCSAMVILDRLEK----KLWIRTATTLVRKLCSERKVGMAAL 654
               D               SA+  L   E     +L+ +  T    +   + + GM  L
Sbjct: 597 SATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQEL 656

Query: 655 -----FFHKLLDMDFHVNRVTLAAFMTACYESNKY 684
                 F K+  ++   N VT +A + AC   N +
Sbjct: 657 SCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSF 691



 Score =  149 bits (376), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 187/382 (48%), Gaps = 22/382 (5%)

Query: 161 LKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRV 220
            K+  +   EM   G+ P+  T N ++ +    GL + A+ LF+EM+ R +  D  SY  
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           ++ A CK G +  A + L+ M  +  + +  S++ +I  F + G    AL  F +   +G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF 340
           +  + +++ +++    K G  ++A ++L EM   G K +V T+ AL+ G  K+G  ++  
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499

Query: 341 RLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDG 400
           ++F ++ R E+  PN+LTY+ +I+GY +      A  +    K  GL  +   Y+ LID 
Sbjct: 500 KVFTEMKR-EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558

Query: 401 HCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG---FHNG- 456
            CK G    A  L++ M++EG SPN+ TYN+I+D   +   +  +      G   F +  
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSA 618

Query: 457 ------LEADKVTY---------NILISEHCKQA--DIKQALALFSKMAKSGIQPDIHSY 499
                  E ++V           N   ++ C++   ++   L +F KM +  I+P++ ++
Sbjct: 619 LSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTF 678

Query: 500 TTLIAVFCREKRMSESEMFFEE 521
           + ++    R     ++ M  EE
Sbjct: 679 SAILNACSRCNSFEDASMLLEE 700



 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 167/334 (50%), Gaps = 6/334 (1%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQY--LFEEMS 207
            ++ ++   G  +EA+ +   M   G+ PN  T N V+  AC  G +++ Q    F+EM 
Sbjct: 273 ALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID-ACGKGGMEFKQVAKFFDEMQ 331

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWL-SVMLDRGFLVDNASFTLIISEFCEKGFA 266
             GV PD  ++  + +A C  G + EA + L   M +R    D  S+  ++   C+ G  
Sbjct: 332 RNGVQPDRITFNSL-LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             A     +     + PN+++++++I+G  K G   +A  +  EM   G   +  ++  L
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           +    K G +E+A  + L+ + S   K +V+TY A++ GY +  K +  + +   MK + 
Sbjct: 451 LSIYTKVGRSEEALDI-LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           ++PN  TY+TLIDG+ K G ++ A ++       G   ++  Y+A++D LCK G V  A 
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
            ++ +    G+  + VTYN +I    + A + ++
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603



 Score =  102 bits (255), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 146/317 (46%), Gaps = 28/317 (8%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G++  A E++ +M  + ++PN  + + V+    + G  D A  LF EM   G+  D  SY
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             ++  Y K+G   EA   L  M   G   D  ++  ++  + ++G      + F +   
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
             + PNL+ ++++I+G  K G  K+A E+  E    G + +V  ++ALID LCK G    
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR-------------AEMLLGRMKEQ 385
           A  L  ++ + E   PNV+TY ++I+ + R   ++R             +  L    + +
Sbjct: 568 AVSLIDEMTK-EGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETE 626

Query: 386 G---------LIPNTNTYTTLIDGHCKAGNFERA--FDLMNLMSREGFSPNICTYNAIVD 434
           G         L   +N  TT     C+ G  E +   ++   M +    PN+ T++AI++
Sbjct: 627 GNRVIQLFGQLTTESNNRTT---KDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 683

Query: 435 GLCKKGRVQEAYKMLKD 451
              +    ++A  +L++
Sbjct: 684 ACSRCNSFEDASMLLEE 700



 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 21/183 (11%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
            ++  +++ G  KEA+E+  E  + G+  +    + ++   C+ GLV  A  L +EM+  
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578

Query: 210 GVHPDSASYRVMVVA------------YCKMGNVLEADKWLSVMLDRGFLVDNASFTLII 257
           G+ P+  +Y  ++ A            Y   G++  +   LS + +         F  + 
Sbjct: 579 GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLT 638

Query: 258 SEF-------CEKGFATRA--LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           +E        CE+G    +  L  F K   + +KPN++ F++++    +  S + A  +L
Sbjct: 639 TESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLL 698

Query: 309 EEM 311
           EE+
Sbjct: 699 EEL 701


>AT1G77340.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:29068620-29069828 REVERSE
           LENGTH=402
          Length = 402

 Score =  164 bits (415), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 185/382 (48%), Gaps = 21/382 (5%)

Query: 93  VTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMV 152
           V+++ SL  N     ALSF  W      F+H +  Y    T L      +  +EV +  +
Sbjct: 30  VSSLFSL--NLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQ---EIPYEVPKITI 84

Query: 153 RSFAEIGRLKEAVEMV-----------FEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQY 201
                   +++A+ +V           FE+  + + P     NL+  +A   GLV+  + 
Sbjct: 85  LMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYK-LTPKCYN-NLLSSLA-RFGLVEEMKR 141

Query: 202 LFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFC 261
           L+ EM    V PD  ++  +V  YCK+G V+EA ++++ ++  G   D  ++T  I+  C
Sbjct: 142 LYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201

Query: 262 EKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVY 321
            +     A + F + +  G   N +++T +I GL +   I +A  +L +M      PNV 
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR 261

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
           T+T LID LC  G   +A  LF ++  S   KP+   YT +I  +C  D L+ A  LL  
Sbjct: 262 TYTVLIDALCGSGQKSEAMNLFKQMSES-GIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
           M E GL+PN  TY  LI G CK  N  +A  L++ M  +   P++ TYN ++ G C  G 
Sbjct: 321 MLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGN 379

Query: 442 VQEAYKMLKDGFHNGLEADKVT 463
           +  AY++L     +GL  ++ T
Sbjct: 380 LDSAYRLLSLMEESGLVPNQRT 401



 Score =  152 bits (385), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 146/286 (51%), Gaps = 4/286 (1%)

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
           P  Y +  L+  L + G  E+  RL+ +++  +   P++ T+  ++NGYC+   +  A+ 
Sbjct: 120 PKCYNN--LLSSLARFGLVEEMKRLYTEMLE-DLVSPDIYTFNTLVNGYCKLGYVVEAKQ 176

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
            +  + + G  P+  TYT+ I GHC+    + AF +   M++ G   N  +Y  ++ GL 
Sbjct: 177 YVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF 236

Query: 438 KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIH 497
           +  ++ EA  +L     +    +  TY +LI   C      +A+ LF +M++SGI+PD  
Sbjct: 237 EAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC 296

Query: 498 SYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
            YT LI  FC    + E+    E  +  G +P   TY ++I G+C++ N+  A+    +M
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKM 355

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
            +   VPD I Y TLI+G C    LD A  L   M E GL+P + T
Sbjct: 356 LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401


>AT5G21222.1 | Symbols:  | protein kinase family protein |
           chr5:7209422-7213700 FORWARD LENGTH=831
          Length = 831

 Score =  163 bits (412), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 194/420 (46%), Gaps = 4/420 (0%)

Query: 192 EMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNA 251
           E G    A  +F  +   G  P   +Y  +V A  +  +       +S +   G   D  
Sbjct: 331 ERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTI 390

Query: 252 SFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM 311
            F  II+   E G   +A++ F K  + G KP    F ++I+G  K G ++++  +L+ M
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450

Query: 312 V-CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDD 370
           +  +  +PN  T   L+   C +   E+A+ +  K+ +S   KP+V+T+  +   Y R  
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM-QSYGVKPDVVTFNTLAKAYARIG 509

Query: 371 KLNRAE-MLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTY 429
               AE M++ RM    + PN  T  T+++G+C+ G  E A      M   G  PN+  +
Sbjct: 510 STCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVF 569

Query: 430 NAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAK 489
           N+++ G      +    +++      G++ D VT++ L++      D+K+   +++ M +
Sbjct: 570 NSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE 629

Query: 490 SGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTM 549
            GI PDIH+++ L   + R     ++E    +  +FG  P    YT +I G+C  G +  
Sbjct: 630 GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKK 689

Query: 550 AIKFFHRMSD-HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
           A++ + +M    G  P+   Y TLI G  +  +  +A  L   M  K ++P   T   +A
Sbjct: 690 AMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIA 749



 Score =  160 bits (405), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/427 (22%), Positives = 208/427 (48%), Gaps = 19/427 (4%)

Query: 133 TSLIGNGNLQKAHEVMQCMVRS------------FAEIGRLK---EAVEMVFEMHNQGMV 177
             LI  G  Q+AH +   ++                 + R K     + ++ ++   G+ 
Sbjct: 327 NGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLK 386

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
           P+T   N ++  + E G +D A  +FE+M   G  P ++++  ++  Y K+G + E+ + 
Sbjct: 387 PDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRL 446

Query: 238 LSVML-DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLC 296
           L +ML D     ++ +  +++  +C +     A    +K    G+KP+++ F ++ +   
Sbjct: 447 LDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 506

Query: 297 KRGSIKQAFEML-EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPN 355
           + GS   A +M+   M+    KPNV T   +++G C++G  E+A R F ++ +     PN
Sbjct: 507 RIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM-KELGVHPN 565

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
           +  + ++I G+   + ++    ++  M+E G+ P+  T++TL++     G+ +R  ++  
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625

Query: 416 LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQA 475
            M   G  P+I  ++ +  G  + G  ++A ++L      G+  + V Y  +IS  C   
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685

Query: 476 DIKQALALFSKM-AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
           ++K+A+ ++ KM    G+ P++ +Y TLI  F   K+  ++E   ++      +PT++T 
Sbjct: 686 EMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTM 745

Query: 535 TSMICGY 541
             +  G+
Sbjct: 746 QLIADGW 752



 Score =  112 bits (280), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 132/302 (43%), Gaps = 43/302 (14%)

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL----------------- 397
           +V + T ++NG     +   A  +   + E+G  P+  TYTTL                 
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377

Query: 398 ------------------IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
                             I+   ++GN ++A  +   M   G  P   T+N ++ G  K 
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437

Query: 440 GRVQEAYK----MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
           G+++E+ +    ML+D     L+ +  T NIL+   C Q  I++A  +  KM   G++PD
Sbjct: 438 GKLEESSRLLDMMLRDEM---LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494

Query: 496 IHSYTTLIAVFCREKRMSESE-MFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFF 554
           + ++ TL   + R      +E M     +     P  RT  +++ GYC EG +  A++FF
Sbjct: 495 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554

Query: 555 HRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKI 614
           +RM + G  P+   + +LI G    + +D    + D M E G+ P  VT  TL   +  +
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614

Query: 615 DD 616
            D
Sbjct: 615 GD 616



 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 116/241 (48%), Gaps = 5/241 (2%)

Query: 432 IVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           +++GL ++GR QEA+ +       G +   +TY  L++   +Q      L+L SK+ K+G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
           ++PD   +  +I        + ++   FE+    G  PT  T+ ++I GY + G L  + 
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444

Query: 552 KFFHRM-SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
           +    M  D    P+      L+   C Q K++EA  +   M   G+ P  VT  TLA  
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504

Query: 611 YCKIDDCCSA--MVILDRLEKKLW--IRTATTLVRKLCSERKVGMAALFFHKLLDMDFHV 666
           Y +I   C+A  M+I   L  K+   +RT  T+V   C E K+  A  FF+++ ++  H 
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564

Query: 667 N 667
           N
Sbjct: 565 N 565


>AT5G62370.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:25041901-25044849 REVERSE
           LENGTH=982
          Length = 982

 Score =  163 bits (412), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 215/457 (47%), Gaps = 16/457 (3%)

Query: 145 HEVMQCMVRSFAE--IGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYL 202
           + V++C+   F E  I  L   V ++ E+     VP+  T  +V+   C+    D A  +
Sbjct: 516 NSVIKCL---FQENIIEDLASLVNIIQELD---FVPDVDTYLIVVNELCKKNDRDAAFAI 569

Query: 203 FEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCE 262
            + M   G+ P  A Y  ++ +  K G V+EA++  + ML+ G   D  ++ ++I+ +  
Sbjct: 570 IDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYAR 629

Query: 263 KGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYT 322
            G    A     +     L+P+   +T +I G  K G +++  + L++M+  G  PNV  
Sbjct: 630 NGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL 689

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
           +TALI    KKG  + +F LF  L+   + K + + Y  +++G  R     +   ++   
Sbjct: 690 YTALIGHFLKKGDFKFSFTLF-GLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEP 748

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR--EGFSPNICTYNAIVDGLCKKG 440
            ++ L+        L+      GN+      M ++ +  +   PN+  +N I+ G C  G
Sbjct: 749 GKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAG 808

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
           R+ EAY  L+     G+  + VTY IL+  H +  DI+ A+ LF     +  +PD   Y+
Sbjct: 809 RLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVMYS 865

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTM-AIKFFHRMSD 559
           TL+   C  KR  ++     E  + G  P K +Y  ++   C    LTM A+K    M+ 
Sbjct: 866 TLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYS-RLTMEAVKVVKDMAA 924

Query: 560 HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
               P SI +  LI  LC++ KL EAR L+  M++ G
Sbjct: 925 LDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961



 Score =  147 bits (372), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/576 (22%), Positives = 247/576 (42%), Gaps = 75/576 (13%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM--SA 208
           ++  F + G + +AV+++  M + G+VP+  T  +++K+  +   + YA  + + +  + 
Sbjct: 384 LIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443

Query: 209 RGVHPD---------------------------SASYRVMVVAYCKMGNVLEADKWLSVM 241
            G++P                            +    V+  A C   N + A   +  M
Sbjct: 444 CGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKM 503

Query: 242 LDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSI 301
           ++ G      S+  +I    ++          +   ++   P++  +  ++  LCK+   
Sbjct: 504 VNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR 563

Query: 302 KQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTA 361
             AF +++ M   G +P V  ++++I  L K+G   +A   F K++ S   +P+ + Y  
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLES-GIQPDEIAYMI 622

Query: 362 MINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
           MIN Y R+ +++ A  L+  + +  L P++ TYT LI G  K G  E+    ++ M  +G
Sbjct: 623 MINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG 682

Query: 422 FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILIS------------ 469
            SPN+  Y A++    KKG  + ++ +      N ++ D + Y  L+S            
Sbjct: 683 LSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKR 742

Query: 470 ----EHCKQADIKQ----------------------ALALFSKMAKSGIQPDIHSYTTLI 503
               E  K+  +++                      A+ +  K+ KS I P+++ + T+I
Sbjct: 743 QVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKS-IIPNLYLHNTII 801

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
             +C   R+ E+    E   + G +P   TYT ++  +   G++  AI  F   +   C 
Sbjct: 802 TGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTN---CE 858

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAM-V 622
           PD + Y TL+ GLC   +  +A  L   M + G+ P + +   L    C       A+ V
Sbjct: 859 PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKV 918

Query: 623 ILDRLEKKLWIRTA--TTLVRKLCSERKVGMAALFF 656
           + D     +W R+   T L+  LC E+K+  A   F
Sbjct: 919 VKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954



 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/582 (22%), Positives = 229/582 (39%), Gaps = 101/582 (17%)

Query: 135 LIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMG 194
           +IGNG +  +  V+  MV    ++ R  EA   +  +   G  P+  + +LV+   C   
Sbjct: 122 VIGNGIVPDS-SVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQD 180

Query: 195 LVDYAQYLFEEMSARGV------------------HPDSAS------------------Y 218
               A + FE++  RG                   H + A                   Y
Sbjct: 181 RFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLY 240

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
           + +   +CK G   EA+     M   G+ VD   +T ++ E+C+    T A+R + +  +
Sbjct: 241 KSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVE 300

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
              + +   F ++I G  K G + +   M  +M+ +G + NV+T+  +I   CK+G  + 
Sbjct: 301 RSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDY 360

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY---- 394
           A RLF+    SE+   NV  YT +I G+ +   +++A  LL RM + G++P+  TY    
Sbjct: 361 ALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLL 420

Query: 395 ----------------TTLIDGHC--------KAGNFE-RAFDLMNLMSREGFSPNICTY 429
                            +++D  C          GN E +   L+  ++R+  +      
Sbjct: 421 KMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGL 480

Query: 430 NAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILI--------------------- 468
             +   LC +     A   ++   + G      +YN +I                     
Sbjct: 481 AVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQE 540

Query: 469 --------------SEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
                         +E CK+ D   A A+   M + G++P +  Y+++I    ++ R+ E
Sbjct: 541 LDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVE 600

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
           +E  F + +  G  P +  Y  MI  Y R G +  A +    +  H   P S  Y  LIS
Sbjct: 601 AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLIS 660

Query: 575 GLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD 616
           G  K   +++     D M+E GL P  V    L   + K  D
Sbjct: 661 GFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGD 702



 Score =  141 bits (356), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 209/517 (40%), Gaps = 71/517 (13%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIA---CEMGLVDYAQYLFEEMSARGVHPDS 215
           G L EA+ M+  +   GM      +NL   +    C+ G    A+ LF+ M   G + D 
Sbjct: 215 GHLNEAIGMLDTLC--GMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDK 272

Query: 216 ASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHK 275
             Y  ++  YCK  N+  A +    M++R F +D   F  +I  F + G   +    F +
Sbjct: 273 VMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQ 332

Query: 276 FSDMGLKPNLINFTSMIEGLCKRGSIKQAFEM-LEEMVCQGWKPNVYTHTALIDGLCKKG 334
               G++ N+  +  MI   CK G++  A  + +     +    NV+ +T LI G  KKG
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAM--------------------------INGYCR 368
             +KA  L ++++      P+ +TY  +                          IN    
Sbjct: 393 GMDKAVDLLMRML-DNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVI 451

Query: 369 DDKLN---RAEMLLG-----------------------------------RMKEQGLIPN 390
           DD  N   + E LLG                                   +M   G  P 
Sbjct: 452 DDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPL 511

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             +Y ++I    +    E    L+N++    F P++ TY  +V+ LCKK     A+ ++ 
Sbjct: 512 PFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIID 571

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                GL      Y+ +I    KQ  + +A   F+KM +SGIQPD  +Y  +I  + R  
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           R+ E+    EE V+    P+  TYT +I G+ + G +    ++  +M + G  P+ + Y 
Sbjct: 632 RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
            LI    K+     +  L+  M E  +    +  ITL
Sbjct: 692 ALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITL 728



 Score =  129 bits (323), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 121/533 (22%), Positives = 229/533 (42%), Gaps = 27/533 (5%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQ-----GMVPNTQTLNLVMKIACEMGLVDYAQYLFEE 205
           ++R   E+G  +  V   F  +NQ     G+VP++  L+ ++    ++   D A+   + 
Sbjct: 101 LIRKLTEMG--QPGVAETF--YNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDR 156

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           + A G  P   S  ++V   C     LEA      + +RG  +       +    C  G 
Sbjct: 157 IIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGH 216

Query: 266 ATRALRYFHKFSDMGLKPNLIN-FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHT 324
              A+        M   P  +N + S+    CKRG   +A  + + M   G+  +   +T
Sbjct: 217 LNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYT 276

Query: 325 ALIDGLCKKGWTEKAFRLFLKLV-RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
            L+   CK      A RL+L++V RS    P +  +  +I+G+ +   L++  ++  +M 
Sbjct: 277 CLMKEYCKDNNMTMAMRLYLRMVERSFELDPCI--FNTLIHGFMKLGMLDKGRVMFSQMI 334

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDL-MNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           ++G+  N  TY  +I  +CK GN + A  L +N    E  S N+  Y  ++ G  KKG +
Sbjct: 335 KKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGM 394

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS--GIQPDIHSYT 500
            +A  +L     NG+  D +TY +L+    K  ++K A+ +   +  +  GI P +    
Sbjct: 395 DKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL 454

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
             I V        + E    E  R            +    C + N   A+    +M + 
Sbjct: 455 GNIEV--------KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNL 506

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSA 620
           GC P   +Y ++I  L +++ +++   L + + E   +P   T + +  E CK +D  +A
Sbjct: 507 GCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAA 566

Query: 621 MVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVT 670
             I+D +E+   +  +   ++++  L  + +V  A   F K+L+     + + 
Sbjct: 567 FAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIA 619



 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/460 (23%), Positives = 180/460 (39%), Gaps = 75/460 (16%)

Query: 139 GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           G L  A EV++ ++   + I   + A+   F + N G+  ++     +++   EMG    
Sbjct: 57  GLLDSAREVIRRVIDGSSSIS--EAALVADFAVDN-GIELDSSCYGALIRKLTEMGQPGV 113

Query: 199 AQYLFEE-MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLII 257
           A+  + + +   G+ PDS+    MV    K+    EA   L  ++  G+     S +L++
Sbjct: 114 AETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVV 173

Query: 258 SEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
            E C +     A   F +  + G    L     + +GLC  G + +A  ML         
Sbjct: 174 DELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGML--------- 224

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
                     D LC  G T     + L              Y ++   +C+      AE 
Sbjct: 225 ----------DTLC--GMTRMPLPVNL--------------YKSLFYCFCKRGCAAEAEA 258

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
           L   M+  G   +   YT L+  +CK  N   A  L   M    F  + C +N ++ G  
Sbjct: 259 LFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFM 318

Query: 438 KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALF-SKMAKSGIQPDI 496
           K G + +   M       G++++  TY+I+I  +CK+ ++  AL LF +      I  ++
Sbjct: 319 KLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNV 378

Query: 497 HSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR 556
           H YT LI                     FGF               ++G +  A+    R
Sbjct: 379 HCYTNLI---------------------FGFY--------------KKGGMDKAVDLLMR 403

Query: 557 MSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           M D+G VPD I Y  L+  L K  +L  A  +  S+++ G
Sbjct: 404 MLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443



 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/385 (20%), Positives = 153/385 (39%), Gaps = 64/385 (16%)

Query: 128 YIVCATSLIGNGNLQKAHEVMQ---------------CMVRSFAEIGRLKEAVEMVFEMH 172
           Y++   +   NG + +A+E+++                ++  F ++G +++  + + +M 
Sbjct: 620 YMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKML 679

Query: 173 NQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVL 232
             G+ PN      ++    + G   ++  LF  M    +  D  +Y  ++     +   +
Sbjct: 680 EDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSG---LWRAM 736

Query: 233 EADKWLSVMLDRG------FLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLI 286
              K   V+++ G       L+       I S     G  + A+    K     + PNL 
Sbjct: 737 ARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKK-SIIPNLY 795

Query: 287 NFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 346
              ++I G C  G + +A+  LE M  +G  PN+ T+T L+    + G  E A  LF   
Sbjct: 796 LHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF--- 852

Query: 347 VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN 406
               N +P+ + Y+ ++ G C   +   A  L+  M++ G+ PN ++Y  L+   C    
Sbjct: 853 -EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL--QC---- 905

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
                                        LC      EA K++KD     +    + +  
Sbjct: 906 -----------------------------LCYSRLTMEAVKVVKDMAALDIWPRSINHTW 936

Query: 467 LISEHCKQADIKQALALFSKMAKSG 491
           LI   C++  +++A ALF+ M +SG
Sbjct: 937 LIYILCEEKKLREARALFAIMVQSG 961


>AT3G18020.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:6165449-6167515 FORWARD
           LENGTH=688
          Length = 688

 Score =  163 bits (412), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 226/499 (45%), Gaps = 51/499 (10%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++     I R+ +A ++VF+M N+G +P+  T   ++   CE+  ++ A  +F+EM   G
Sbjct: 168 LMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCG 227

Query: 211 VHPDSASYRVMVVAYCKM-----GNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           + P+S +  V++  + KM     G  L  + W  +  +    +  A+F  ++   C +G+
Sbjct: 228 IRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGY 287

Query: 266 ATR-----------------------------------ALRYFHKFSDMGLKPNLINFTS 290
                                                 A R  +     GLKP   ++ +
Sbjct: 288 FNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNA 347

Query: 291 MIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 350
           +I GLCK G   +A+++LEE     + P+ YT+  L++ LCK+  T KA R  L+L+  +
Sbjct: 348 IIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA-RNVLELMLRK 406

Query: 351 NNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA 410
                   Y   + G C  D       +L  M +    P+  T  T+I+G CK G  + A
Sbjct: 407 EGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDA 466

Query: 411 FDLMNLMSREGF-SPNICTYNAIVDGLCKKGRVQEAYKMLKDGF-HNGLEADKVTYNILI 468
             +++ M    F +P+  T N ++ GL  +GR +EA  +L      N ++   V YN +I
Sbjct: 467 MKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVI 526

Query: 469 SEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFI 528
               K     +A+++F ++ K+ +  D  +Y  +I   C   ++  ++ F+++ +     
Sbjct: 527 RGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI----W 582

Query: 529 PTKR----TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
           P+ R     Y + + G C+ G L+ A  F + ++D G +P+ + Y T+I+   +     E
Sbjct: 583 PSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKRE 642

Query: 585 ARGLYDSMIEKGLIPCEVT 603
           A  + + M + G  P  VT
Sbjct: 643 AYQILEEMRKNGQAPDAVT 661



 Score =  135 bits (339), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 220/507 (43%), Gaps = 44/507 (8%)

Query: 148 MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVM-------KIACEMGLVDYAQ 200
           +  ++ S  + GR  EA          G +P+ +T N+++            +G++    
Sbjct: 93  LSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLI 152

Query: 201 YLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEF 260
              +E       P   +Y  ++   C +  V++A K +  M +RG L D  +FT +I  +
Sbjct: 153 GFKKEFV-----PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGY 207

Query: 261 CEKGFATRALRYFHK-FSDM---GLKPNLINFTSMIEGLCK-------RGSIKQAFEMLE 309
           CE     R L   HK F +M   G++PN +  + +I G  K       R  +K+ +E ++
Sbjct: 208 CE----IRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMK 263

Query: 310 EMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF--LKLVRSENNKPNVLTYTAMINGYC 367
                  K   + +  L+D +C++G+    F +   + L  S N +     Y  MI+  C
Sbjct: 264 NETDTSMKAAAFAN--LVDSMCREGYFNDIFEIAENMSLCESVNVE---FAYGHMIDSLC 318

Query: 368 RDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC 427
           R  + + A  ++  MK +GL P   +Y  +I G CK G   RA+ L+   S   F P+  
Sbjct: 319 RYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEY 378

Query: 428 TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM 487
           TY  +++ LCK+    +A  +L+             YNI +   C   +  + L +   M
Sbjct: 379 TYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSM 438

Query: 488 AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF-IPTKRTYTSMICGYCREGN 546
            +   +PD ++  T+I   C+  R+ ++    ++ +   F  P   T  +++CG   +G 
Sbjct: 439 LQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGR 498

Query: 547 LTMAIKFFHR-MSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRI 605
              A+   +R M ++   P  +AY  +I GL K  K DEA  ++   +EK  +  + T  
Sbjct: 499 AEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVF-GQLEKASVTADSTTY 557

Query: 606 TLAYEYCKIDDCCSAMVILDRLEKKLW 632
            +      ID  C    +   + KK W
Sbjct: 558 AII-----IDGLCVTNKV--DMAKKFW 577



 Score =  129 bits (325), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 176/406 (43%), Gaps = 12/406 (2%)

Query: 197 DYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLI 256
           D A  + + +  RG  PDS +   ++ + C  G   EA +   + L  GF+ D  +  +I
Sbjct: 72  DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131

Query: 257 ISEFCEKGFATRALRYFHKFSDMGLK----PNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           I+           L   H+   +G K    P+L N+  ++  LC    +  A +++ +M 
Sbjct: 132 IARLLYSRSPVSTLGVIHRL--IGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMR 189

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYC--RDD 370
            +G  P+V T T LI G C+    E A ++F ++ R    +PN LT + +I G+   RD 
Sbjct: 190 NRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEM-RVCGIRPNSLTLSVLIGGFLKMRDV 248

Query: 371 KLNRAEM--LLGRMK-EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC 427
           +  R  M  L   MK E         +  L+D  C+ G F   F++   MS         
Sbjct: 249 ETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEF 308

Query: 428 TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM 487
            Y  ++D LC+  R   A +++      GL+  + +YN +I   CK     +A  L  + 
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368

Query: 488 AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNL 547
           ++    P  ++Y  L+   C+E    ++    E  +R       R Y   + G C   N 
Sbjct: 369 SEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNP 428

Query: 548 TMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
           T  +     M    C PD     T+I+GLCK  ++D+A  + D M+
Sbjct: 429 TEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMM 474



 Score =  109 bits (273), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 158/377 (41%), Gaps = 37/377 (9%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+ S     R   A  +V+ M ++G+ P   + N ++   C+ G    A  L EE S   
Sbjct: 313 MIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFE 372

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P   +Y++++ + CK  +  +A   L +ML +        + + +   C     T  L
Sbjct: 373 FFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEIL 432

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW-KPNVYTHTALIDG 329
                      +P+     ++I GLCK G +  A ++L++M+   +  P+  T   ++ G
Sbjct: 433 NVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCG 492

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
           L  +G  E+A  +  +++     KP V+ Y A+I G  +  K + A  + G++++  +  
Sbjct: 493 LLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTA 552

Query: 390 NTNTYTTLIDGHC-----------------------------------KAGNFERAFDLM 414
           ++ TY  +IDG C                                   ++G    A   +
Sbjct: 553 DSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFL 612

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
             ++  G  PN+  YN ++    + G  +EAY++L++   NG   D VT+ IL   H   
Sbjct: 613 YDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLH-DS 671

Query: 475 ADIKQALALFSKMAKSG 491
            D+     L S  A SG
Sbjct: 672 MDLTVERELISNPATSG 688



 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 2/191 (1%)

Query: 406 NFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYN 465
           N + A  +++ +   G+ P+    ++++  LC  GR  EA++       +G   D+ T N
Sbjct: 70  NPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCN 129

Query: 466 ILISEHCKQADIKQALALFSKMA--KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
           ++I+           L +  ++   K    P + +Y  L+   C   R+ ++     +  
Sbjct: 130 VIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMR 189

Query: 524 RFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
             G +P   T+T++I GYC    L +A K F  M   G  P+S+    LI G  K   ++
Sbjct: 190 NRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVE 249

Query: 584 EARGLYDSMIE 594
             R L   + E
Sbjct: 250 TGRKLMKELWE 260


>AT2G18940.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:8203873-8206341 REVERSE
           LENGTH=822
          Length = 822

 Score =  162 bits (410), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 128/552 (23%), Positives = 240/552 (43%), Gaps = 48/552 (8%)

Query: 155 FAEIGR-LKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHP 213
           F ++GR  ++ + ++ EM ++G+  +  T + V+      GL+  A+  F E+ + G  P
Sbjct: 255 FGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEP 314

Query: 214 DSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYF 273
            + +Y  ++  + K G   EA   L  M +     D+ ++  +++ +   GF+  A    
Sbjct: 315 GTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVI 374

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
              +  G+ PN I +T++I+   K G   +A ++   M   G  PN  T+ A++  L KK
Sbjct: 375 EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK 434

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR-AEMLLGRMKEQGLIPNTN 392
             + +  ++   + +S    PN  T+  M+   C +  +++    +   MK  G  P+ +
Sbjct: 435 SRSNEMIKMLCDM-KSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRD 492

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG 452
           T+ TLI  + + G+   A  +   M+R GF+  + TYNA+++ L +KG  +    ++ D 
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552

Query: 453 FHNGLEADKVTYNILISEHCKQAD----------IKQ---------------------AL 481
              G +  + +Y++++  + K  +          IK+                     AL
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612

Query: 482 A----LFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
           A     F+   K G +PD+  + +++++F R     ++E   E     G  P   TY S+
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
           +  Y R G    A +    +      PD ++Y T+I G C++  + EA  +   M E+G+
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732

Query: 598 IPCEVTRITLAYEY------CKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGM 651
            PC  T  T    Y       +I+D    M   D    +L   T   +V   C   K   
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNEL---TFKMVVDGYCRAGKYSE 789

Query: 652 AALFFHKLLDMD 663
           A  F  K+   D
Sbjct: 790 AMDFVSKIKTFD 801



 Score =  159 bits (402), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 124/551 (22%), Positives = 235/551 (42%), Gaps = 50/551 (9%)

Query: 138 NGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVD 197
           +G L+  H+V++  VR      +   A +++ ++  Q  + + +    ++      G  +
Sbjct: 168 SGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYE 227

Query: 198 YAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW------LSVMLDRGFLVDNA 251
            A  LFE M   G  P   +Y V++  + KMG       W      L  M  +G   D  
Sbjct: 228 KAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR-----SWRKILGVLDEMRSKGLKFDEF 282

Query: 252 SFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM 311
           + + ++S    +G    A  +F +    G +P  + + ++++   K G   +A  +L+EM
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 342

Query: 312 VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK 371
                  +  T+  L+    + G++++A  + ++++  +   PN +TYT +I+ Y +  K
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFSKEAAGV-IEMMTKKGVMPNAITYTTVIDAYGKAGK 401

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
            + A  L   MKE G +PNT TY  ++    K         ++  M   G SPN  T+N 
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461

Query: 432 IVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           ++     KG  +   ++ ++    G E D+ T+N LIS + +      A  ++ +M ++G
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN----- 546
               + +Y  L+    R+      E    +    GF PT+ +Y+ M+  Y + GN     
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581

Query: 547 ------------------------------LTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
                                         L  + + F     HG  PD + + +++S  
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641

Query: 577 CKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK---KLWI 633
            + +  D+A G+ +S+ E GL P  VT  +L   Y +  +C  A  IL  LEK   K  +
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701

Query: 634 RTATTLVRKLC 644
            +  T+++  C
Sbjct: 702 VSYNTVIKGFC 712



 Score =  157 bits (397), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/518 (22%), Positives = 207/518 (39%), Gaps = 79/518 (15%)

Query: 156 AEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDS 215
           A  G L+EA E   E+ + G  P T T N ++++  + G+   A  + +EM       DS
Sbjct: 292 AREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADS 351

Query: 216 ASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHK 275
            +Y  +V AY + G   EA   + +M  +G + +  ++T +I  + + G    AL+ F+ 
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411

Query: 276 FSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGW 335
             + G  PN   + +++  L K+    +  +ML +M   G  PN  T   ++  LC    
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKG 470

Query: 336 TEKAFRLFLKLVRSENNKPN-----------------------------------VLTYT 360
            +K      + ++S   +P+                                   V TY 
Sbjct: 471 MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYN 530

Query: 361 AMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF------------- 407
           A++N   R       E ++  MK +G  P   +Y+ ++  + K GN+             
Sbjct: 531 ALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEG 590

Query: 408 -------------------------ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
                                    ERAF    L  + G+ P++  +N+++    +    
Sbjct: 591 QIFPSWMLLRTLLLANFKCRALAGSERAF---TLFKKHGYKPDMVIFNSMLSIFTRNNMY 647

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
            +A  +L+    +GL  D VTYN L+  + ++ +  +A  +   + KS ++PD+ SY T+
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGC 562
           I  FCR   M E+     E    G  P   TY + + GY   G           M+ + C
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC 767

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC 600
            P+ + +  ++ G C+  K  EA      +  K   PC
Sbjct: 768 RPNELTFKMVVDGYCRAGKYSEAMDFVSKI--KTFDPC 803



 Score =  124 bits (310), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 140/319 (43%), Gaps = 29/319 (9%)

Query: 141 LQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQ 200
            +   +    ++ ++   G   +A +M  EM   G      T N ++      G     +
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546

Query: 201 YLFEEMSARGVHPDSASYRVMVVAYCKMGNVL----------EADKWLSVMLDRGFLVDN 250
            +  +M ++G  P   SY +M+  Y K GN L          E   + S ML R  L+ N
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLAN 606

Query: 251 ASFTLIISEFCEKGFATRAL----RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
                         F  RAL    R F  F   G KP+++ F SM+    +     QA  
Sbjct: 607 --------------FKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEG 652

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           +LE +   G  P++ T+ +L+D   ++G   KA  + LK +     KP++++Y  +I G+
Sbjct: 653 ILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI-LKTLEKSQLKPDLVSYNTVIKGF 711

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
           CR   +  A  +L  M E+G+ P   TY T + G+   G F    D++  M++    PN 
Sbjct: 712 CRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNE 771

Query: 427 CTYNAIVDGLCKKGRVQEA 445
            T+  +VDG C+ G+  EA
Sbjct: 772 LTFKMVVDGYCRAGKYSEA 790



 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 160/359 (44%), Gaps = 35/359 (9%)

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM---INGYCRDDKLNRAEMLLGR 381
           +L+ GL   G  E+A  LF  LV S N+    L +  +   +    R+ + + A  LL +
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
           +  Q  + +   YTT++  + + G +E+A DL   M   G SP + TYN I+D   K GR
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260

Query: 442 V-QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
             ++   +L +    GL+ D+ T + ++S   ++  +++A   F+++   G +P   +Y 
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
            L+ VF +    +E+    +E           TY  ++  Y R G    A      M+  
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSA 620
           G +P++I Y T+I    K  K DEA  L+ SM E G +P                + C+ 
Sbjct: 381 GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP----------------NTCTY 424

Query: 621 MVILDRLEKKLWIRTATTLVRKLCSERKVG----------MAALFFHKLLDMDFHVNRV 669
             +L  L KK     +  +++ LC  +  G          M AL  +K   MD  VNRV
Sbjct: 425 NAVLSLLGKK---SRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK--GMDKFVNRV 478



 Score = 52.8 bits (125), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/165 (19%), Positives = 70/165 (42%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           +   M+  F       +A  ++  +   G+ P+  T N +M +    G    A+ + + +
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
               + PD  SY  ++  +C+ G + EA + LS M +RG      ++   +S +   G  
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 752

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM 311
                     +    +PN + F  +++G C+ G   +A + + ++
Sbjct: 753 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797


>AT3G16010.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr3:5434142-5436244 FORWARD
           LENGTH=642
          Length = 642

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/512 (22%), Positives = 222/512 (43%), Gaps = 25/512 (4%)

Query: 107 VALSFFHWAIGYSRFRHFMRLYIV----------------CATSLIGNGNLQKAHEVMQC 150
           V + FF WA     F+H    Y+                     ++ N  +  +  V+  
Sbjct: 108 VKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSE 167

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V++      + +A+ + ++   +   P + T N V+ +  + G  +    ++ EM   G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227

Query: 211 -VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
              PD+ +Y  ++ +Y K+G    A +    M D         +T ++  + + G   +A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           L  F +    G  P +  +T +I+GL K G + +A+   ++M+  G  P+V     L++ 
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMING-YCRDDKLNRAEMLLGRMKEQGLI 388
           L K G  E+   +F ++       P V++Y  +I   +     ++       +MK   + 
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCT-PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ---EA 445
           P+  TY+ LIDG+CK    E+A  L+  M  +GF P    Y ++++ L K  R +   E 
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
           +K LK+ F N        Y ++I    K   + +A+ LF++M   G  PD+++Y  L++ 
Sbjct: 467 FKELKENFGN---VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
             +   ++E+     +    G      ++  ++ G+ R G    AI+ F  +   G  PD
Sbjct: 524 MVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
            + Y TL+         +EA  +   M +KG 
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615



 Score = 99.4 bits (246), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 145/311 (46%), Gaps = 2/311 (0%)

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
           T+  LI  L +     + +R   ++VR+     +    + ++    R   +++A  +  +
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS-PNICTYNAIVDGLCKKG 440
            K +   P ++TY ++I    + G  E+  ++   M  EG   P+  TY+A++    K G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
           R   A ++  +   N ++  +  Y  L+  + K   +++AL LF +M ++G  P +++YT
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
            LI    +  R+ E+  F+++ +R G  P      +++    + G +      F  M   
Sbjct: 308 ELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMW 367

Query: 561 GCVPDSIAYGTLISGLCK-QSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCS 619
            C P  ++Y T+I  L + ++ + E    +D M    + P E T   L   YCK +    
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427

Query: 620 AMVILDRLEKK 630
           A+++L+ +++K
Sbjct: 428 ALLLLEEMDEK 438



 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 87/180 (48%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ +  +  R + A E+  E+       +++   +++K   + G +  A  LF EM  +G
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD  +Y  ++    K G + EA+  L  M + G   D  S  +I++ F   G   RA+
Sbjct: 510 SGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAI 569

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F      G+KP+ + + +++      G  ++A  M+ EM  +G++ +  T+++++D +
Sbjct: 570 EMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629



 Score = 67.0 bits (162), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 2/157 (1%)

Query: 139 GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           GN+  +  V   M++ F + G+L EAV++  EM NQG  P+    N +M    + G+++ 
Sbjct: 475 GNV--SSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINE 532

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
           A  L  +M   G   D  S+ +++  + + G    A +    +   G   D  ++  ++ 
Sbjct: 533 ANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLG 592

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
            F   G    A R   +  D G + + I ++S+++ +
Sbjct: 593 CFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629



 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
           + L+    R K +S++   F +A      PT  TY S+I    +EG      + +  M +
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225

Query: 560 HG-CVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCC 618
            G C PD+I Y  LIS   K  + D A  L+D M +  + P E    TL   Y K+    
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285

Query: 619 SAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLL 660
            A+ + + +++      + T T L++ L    +V  A  F+  +L
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML 330


>AT1G02060.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:360918-363050 REVERSE
           LENGTH=710
          Length = 710

 Score =  160 bits (404), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 202/474 (42%), Gaps = 55/474 (11%)

Query: 137 GNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLV 196
            NG ++        ++RS+   G  +E+V++   M   G+ P+  T N ++ I  + G  
Sbjct: 130 SNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRT 189

Query: 197 DYAQYLFEEM-SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
             A  LF+EM    GV PDS ++  ++  +CK   V EA                     
Sbjct: 190 GMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEA--------------------- 228

Query: 256 IISEFCEKGFATRALRYFHKFSDMGL---KPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
                            F  F DM L    P+++ + ++I+GLC+ G +K A  +L  M+
Sbjct: 229 -----------------FRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271

Query: 313 CQGWK--PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDD 370
            +     PNV ++T L+ G C K   ++A  +F  ++ S   KPN +TY  +I G     
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDML-SRGLKPNAVTYNTLIKGLSEAH 330

Query: 371 KLNRAEMLL--GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
           + +  + +L  G        P+  T+  LI  HC AG+ + A  +   M      P+  +
Sbjct: 331 RYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSAS 390

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK-------VTYNILISEHCKQADIKQAL 481
           Y+ ++  LC +     A  +  + F   +   K         YN +    C     KQA 
Sbjct: 391 YSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAE 450

Query: 482 ALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGY 541
            +F ++ K G+Q D  SY TLI   CRE +   +       +R  F+P   TY  +I G 
Sbjct: 451 KVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGL 509

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
            + G   +A     RM     +P +  + ++++ L K+   +E+  L   M+EK
Sbjct: 510 LKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563



 Score =  150 bits (379), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 198/482 (41%), Gaps = 59/482 (12%)

Query: 212 HPDSASYRVMVVAYCKMGNV----LEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
           HP     R  V+   ++  V    L    W+S   ++GF     SF L++ EF  +    
Sbjct: 61  HPSQTISRTTVLQTLRLIKVPADGLRFFDWVS---NKGFSHKEQSFFLML-EFLGRARNL 116

Query: 268 RALRYF----HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
              R F     + S+  +K     F S+I      G  +++ ++ + M   G  P+V T 
Sbjct: 117 NVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTF 176

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
            +L+  L K+G T  A  LF ++ R+    P+  T+  +ING+C++  ++ A  +   M+
Sbjct: 177 NSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME 236

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG--FSPNICTYNAIVDGLCKKGR 441
                P+  TY T+IDG C+AG  + A ++++ M ++     PN+ +Y  +V G C K  
Sbjct: 237 LYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQE 296

Query: 442 VQEAYKMLKDGFHNGLEADKVTY------------------------------------- 464
           + EA  +  D    GL+ + VTY                                     
Sbjct: 297 IDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTF 356

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           NILI  HC    +  A+ +F +M    + PD  SY+ LI   C       +E  F E   
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 416

Query: 525 FGFI-------PTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
              +       P    Y  M    C  G    A K F ++   G V D  +Y TLI+G C
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHC 475

Query: 578 KQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTAT 637
           ++ K   A  L   M+ +  +P   T   L     KI +   A   L R+ +  ++  AT
Sbjct: 476 REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 535

Query: 638 TL 639
           T 
Sbjct: 536 TF 537



 Score =  149 bits (375), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 211/485 (43%), Gaps = 52/485 (10%)

Query: 159 GRLKEAVEMVFEMHNQ-GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSAS 217
           GR   A ++  EM    G+ P++ T N ++   C+  +VD A  +F++M     +PD  +
Sbjct: 187 GRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVT 246

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLV--DNASFTLIISEFCEKGFATRALRYFHK 275
           Y  ++   C+ G V  A   LS ML +   V  +  S+T ++  +C K     A+  FH 
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306

Query: 276 FSDMGLKPNLINFTSMIEGL-------------------------------------CKR 298
               GLKPN + + ++I+GL                                     C  
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE------NN 352
           G +  A ++ +EM+     P+  +++ LI  LC +   ++A  LF +L   E        
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           KP    Y  M    C + K  +AE +  ++ ++G + +  +Y TLI GHC+ G F+ A++
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYE 485

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           L+ LM R  F P++ TY  ++DGL K G    A+  L+    +       T++ +++E  
Sbjct: 486 LLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELA 545

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           K+    ++  L + M +  I+ +I   T ++ +     +  ++ +        G++    
Sbjct: 546 KRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYL---- 601

Query: 533 TYTSMICGY-CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
                + GY C    L  A        +   + D     T+I GLCK  +  EA  LY+ 
Sbjct: 602 VKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNE 661

Query: 592 MIEKG 596
           ++E G
Sbjct: 662 LVELG 666


>AT5G65820.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:26339876-26341789 REVERSE
           LENGTH=637
          Length = 637

 Score =  159 bits (401), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 5/318 (1%)

Query: 283 PNLIN---FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           P LI    F  +++       +K+A E+L+EM   G++P+ Y    L+D LCK G  + A
Sbjct: 178 PQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDA 237

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            +LF  +        N+  +T+++ G+CR  K+  A+ +L +M E G  P+   YT L+ 
Sbjct: 238 AKLFEDM--RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLS 295

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           G+  AG    A+DL+  M R GF PN   Y  ++  LCK  R++EA K+  +      EA
Sbjct: 296 GYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEA 355

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
           D VTY  L+S  CK   I +   +   M K G+ P   +Y  ++    +++   E     
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM 415

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
           E+  +  + P    Y  +I   C+ G +  A++ ++ M ++G  P    +  +I+GL  Q
Sbjct: 416 EKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQ 475

Query: 580 SKLDEARGLYDSMIEKGL 597
             L EA   +  M+ +GL
Sbjct: 476 GCLLEASDHFKEMVTRGL 493



 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 217/452 (48%), Gaps = 62/452 (13%)

Query: 70  HMRVSPPRLHLSIDPDSLTHEQA-VTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLY 128
           H RV  P+L L+++   +      +  V +  G+AG++    FF WA    R+ H + +Y
Sbjct: 94  HSRV--PKLELALNESGVELRPGLIERVLNRCGDAGNL-GYRFFVWAAKQPRYCHSIEVY 150

Query: 129 -----IVCATSLIG------------NGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEM 171
                I+      G            N  L +  E+   +V+ FA    +K+A+E++ EM
Sbjct: 151 KSMVKILSKMRQFGAVWGLIEEMRKENPQLIEP-ELFVVLVQRFASADMVKKAIEVLDEM 209

Query: 172 HNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY-RVMVVAYCKMGN 230
              G  P+      ++   C+ G V  A  LFE+M  R   P +  Y   ++  +C++G 
Sbjct: 210 PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR--FPVNLRYFTSLLYGWCRVGK 267

Query: 231 VLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTS 290
           ++EA   L  M + GF                                   +P+++++T+
Sbjct: 268 MMEAKYVLVQMNEAGF-----------------------------------EPDIVDYTN 292

Query: 291 MIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 350
           ++ G    G +  A+++L +M  +G++PN   +T LI  LCK    E+A ++F+++ R E
Sbjct: 293 LLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYE 352

Query: 351 NNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA 410
             + +V+TYTA+++G+C+  K+++  ++L  M ++GL+P+  TY  ++  H K  +FE  
Sbjct: 353 -CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEEC 411

Query: 411 FDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISE 470
            +LM  M +  + P+I  YN ++   CK G V+EA ++  +   NGL     T+ I+I+ 
Sbjct: 412 LELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 471

Query: 471 HCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
              Q  + +A   F +M   G+   +  Y TL
Sbjct: 472 LASQGCLLEASDHFKEMVTRGLF-SVSQYGTL 502



 Score =  156 bits (395), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 175/363 (48%), Gaps = 8/363 (2%)

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
           L++   F +++  F       +A+    +    G +P+   F  +++ LCK GS+K A +
Sbjct: 180 LIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAK 239

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           + E+M  + +  N+   T+L+ G C+ G   +A  + +++  +   +P+++ YT +++GY
Sbjct: 240 LFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEA-GFEPDIVDYTNLLSGY 297

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
               K+  A  LL  M+ +G  PN N YT LI   CK    E A  +   M R     ++
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK 486
            TY A+V G CK G++ + Y +L D    GL   ++TY  ++  H K+   ++ L L  K
Sbjct: 358 VTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEK 417

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           M +    PDI  Y  +I + C+   + E+   + E    G  P   T+  MI G   +G 
Sbjct: 418 MRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGC 477

Query: 547 LTMAIKFFHRMSDHGCVPDSIAYGT---LISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
           L  A   F  M   G    S  YGT   L++ + K  KL+ A+ ++  +  KG   CE+ 
Sbjct: 478 LLEASDHFKEMVTRGLFSVS-QYGTLKLLLNTVLKDKKLEMAKDVWSCITSKG--ACELN 534

Query: 604 RIT 606
            ++
Sbjct: 535 VLS 537



 Score =  119 bits (299), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 153/325 (47%), Gaps = 5/325 (1%)

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM-KEQGLIPNTNTYTTL 397
            +R F+   +      ++  Y +M+    +  +      L+  M KE   +     +  L
Sbjct: 130 GYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVL 189

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           +     A   ++A ++++ M + GF P+   +  ++D LCK G V++A K+ +D      
Sbjct: 190 VQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFED-MRMRF 248

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
             +   +  L+   C+   + +A  +  +M ++G +PDI  YT L++ +    +M+++  
Sbjct: 249 PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYD 308

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
              +  R GF P    YT +I   C+   +  A+K F  M  + C  D + Y  L+SG C
Sbjct: 309 LLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368

Query: 578 KQSKLDEARGLYDSMIEKGLIPCEVT--RITLAYEYCK-IDDCCSAMVILDRLEKKLWIR 634
           K  K+D+   + D MI+KGL+P E+T   I +A+E  +  ++C   M  + ++E    I 
Sbjct: 369 KWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIG 428

Query: 635 TATTLVRKLCSERKVGMAALFFHKL 659
               ++R  C   +V  A   ++++
Sbjct: 429 IYNVVIRLACKLGEVKEAVRLWNEM 453



 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 125/290 (43%), Gaps = 2/290 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  +A  G++ +A +++ +M  +G  PN     ++++  C++  ++ A  +F EM    
Sbjct: 293 LLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYE 352

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
              D  +Y  +V  +CK G + +    L  M+ +G +    ++  I+    +K      L
Sbjct: 353 CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECL 412

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               K   +   P++  +  +I   CK G +K+A  +  EM   G  P V T   +I+GL
Sbjct: 413 ELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472

Query: 331 CKKGWTEKAFRLFLKLV-RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
             +G   +A   F ++V R   +     T   ++N   +D KL  A+ +   +  +G   
Sbjct: 473 ASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACE 532

Query: 390 -NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
            N  ++T  I      G  + A      M    F P   T+  ++ GL K
Sbjct: 533 LNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKK 582


>AT1G52640.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:19608857-19610428 REVERSE
           LENGTH=523
          Length = 523

 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 160/339 (47%), Gaps = 2/339 (0%)

Query: 246 FLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAF 305
           F + +  F ++   +      + A R F++  + G+KP + +   ++  LC +  +  A 
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193

Query: 306 EMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMING 365
           E   +    G  P+  T++ L+ G  +      A ++F +++   N   ++L Y A+++ 
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEML-ERNCVVDLLAYNALLDA 252

Query: 366 YCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPN 425
            C+   ++    +   M   GL P+  ++   I  +C AG+   A+ +++ M R    PN
Sbjct: 253 LCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPN 312

Query: 426 ICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFS 485
           + T+N I+  LCK  +V +AY +L +    G   D  TYN +++ HC   ++ +A  L S
Sbjct: 313 VYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLS 372

Query: 486 KMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCRE- 544
           +M ++   PD H+Y  ++ +  R  R   +   +E      F PT  TYT MI G  R+ 
Sbjct: 373 RMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKK 432

Query: 545 GNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
           G L  A ++F  M D G  P S     L + L    ++D
Sbjct: 433 GKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471



 Score =  147 bits (372), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 180/402 (44%), Gaps = 20/402 (4%)

Query: 108 ALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGN-----------------LQKAHEVMQC 150
           A  FF WA     F H +  Y +    ++G+                    + + +V   
Sbjct: 85  AHRFFLWARRIPDFAHSLESYHIL-VEILGSSKQFALLWDFLIEAREYNYFEISSKVFWI 143

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           + R+++      EA      M   G+ P    L+ ++   C+   V++AQ  F +    G
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFG 203

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P + +Y ++V  + ++ +   A K    ML+R  +VD  ++  ++   C+ G      
Sbjct: 204 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 263

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + F +  ++GLKP+  +F   I   C  G +  A+++L+ M      PNVYT   +I  L
Sbjct: 264 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTL 323

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           CK    + A+ L  ++++   N P+  TY +++  +C   ++NRA  LL RM     +P+
Sbjct: 324 CKNEKVDDAYLLLDEMIQKGAN-PDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC-KKGRVQEAYKML 449
            +TY  ++    + G F+RA ++   MS   F P + TY  ++ GL  KKG+++EA +  
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYF 442

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           +     G+     T  +L +       +     L  KM +S 
Sbjct: 443 EMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484



 Score =  130 bits (326), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 149/310 (48%), Gaps = 7/310 (2%)

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTE-----KAFRLFLKLVRSENNK 353
           GS KQ F +L + + +  + N +  ++ +  +  + ++      +A R F ++V     K
Sbjct: 113 GSSKQ-FALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEF-GIK 170

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           P V     +++  C    +N A+   G+ K  G++P+  TY+ L+ G  +  +   A  +
Sbjct: 171 PCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKV 230

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
            + M       ++  YNA++D LCK G V   YKM ++  + GL+ D  ++ I I  +C 
Sbjct: 231 FDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCD 290

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
             D+  A  +  +M +  + P+++++  +I   C+ +++ ++ +  +E ++ G  P   T
Sbjct: 291 AGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT 350

Query: 534 YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
           Y S++  +C    +  A K   RM    C+PD   Y  ++  L +  + D A  +++ M 
Sbjct: 351 YNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMS 410

Query: 594 EKGLIPCEVT 603
           E+   P   T
Sbjct: 411 ERKFYPTVAT 420



 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 116/243 (47%), Gaps = 4/243 (1%)

Query: 422 FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF-HNGLEADKVTYNILISEHCKQADIKQA 480
           F+ ++ +Y+ +V+ L    +    +  L +   +N  E     + I+   + +     +A
Sbjct: 98  FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEA 157

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
              F++M + GI+P +     L+   C +K ++ ++ FF +A  FG +P+ +TY+ ++ G
Sbjct: 158 CRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRG 217

Query: 541 YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC 600
           + R  + + A K F  M +  CV D +AY  L+  LCK   +D    ++  M   GL P 
Sbjct: 218 WARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPD 277

Query: 601 EVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKLCSERKVGMAALFFH 657
             +     + YC   D  SA  +LDR+++   +    T   +++ LC   KV  A L   
Sbjct: 278 AYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLD 337

Query: 658 KLL 660
           +++
Sbjct: 338 EMI 340



 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 3/221 (1%)

Query: 409 RAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILI 468
           RAF   N M   G  P +   + ++  LC K  V  A +        G+     TY+IL+
Sbjct: 159 RAF---NRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215

Query: 469 SEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFI 528
               +  D   A  +F +M +     D+ +Y  L+   C+   +      F+E    G  
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275

Query: 529 PTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGL 588
           P   ++   I  YC  G++  A K   RM  +  VP+   +  +I  LCK  K+D+A  L
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335

Query: 589 YDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
            D MI+KG  P   T  ++   +C   +   A  +L R+++
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDR 376



 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 68/164 (41%)

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           L+   C +  +  A   F K    GI P   +Y+ L+  + R +  S +   F+E +   
Sbjct: 179 LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN 238

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
            +     Y +++   C+ G++    K F  M + G  PD+ ++   I   C    +  A 
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAY 298

Query: 587 GLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
            + D M    L+P   T   +    CK +    A ++LD + +K
Sbjct: 299 KVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQK 342


>AT1G20300.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:7029701-7031314 FORWARD
           LENGTH=537
          Length = 537

 Score =  156 bits (394), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 183/374 (48%), Gaps = 6/374 (1%)

Query: 229 GNVLEAD-KW--LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNL 285
           G V + D  W  + +M  R   +   +FT++I  +   G A+ A+  F++  D G  P+ 
Sbjct: 162 GKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDK 221

Query: 286 INFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK 345
           I F+ +I  L ++    +A    + +    ++P+V  +T L+ G C+ G   +A ++F K
Sbjct: 222 IAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEISEAEKVF-K 279

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAG 405
            ++    +PNV TY+ +I+  CR  +++RA  +   M + G  PN  T+  L+  H KAG
Sbjct: 280 EMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339

Query: 406 NFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYN 465
             E+   + N M + G  P+  TYN +++  C+   ++ A K+L        E +  T+N
Sbjct: 340 RTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFN 399

Query: 466 ILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRF 525
            +     K+ D+  A  ++SKM ++  +P+  +Y  L+ +F   K         +E    
Sbjct: 400 TIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDK 459

Query: 526 GFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA-YGTLISGLCKQSKLDE 584
              P   TY  ++  +C  G+   A K F  M +  C+  S++ Y  +++ L +  +L +
Sbjct: 460 EVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKK 519

Query: 585 ARGLYDSMIEKGLI 598
              L + MI+KGL+
Sbjct: 520 HEELVEKMIQKGLV 533



 Score =  116 bits (290), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/402 (22%), Positives = 169/402 (42%), Gaps = 19/402 (4%)

Query: 108 ALSFFHWAIGYSRFRHF--------------MRLYIVC--ATSLIGNGNLQKAHEVMQCM 151
           +L+FF+WA     + H               +R + +      L+ + N++ + E    +
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           +R +   G   EAV     M + G VP+    ++V+           AQ  F+ +  R  
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-F 251

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            PD   Y  +V  +C+ G + EA+K    M   G   +  +++++I   C  G  +RA  
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
            F    D G  PN I F +++    K G  ++  ++  +M   G +P+  T+  LI+  C
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
           +    E A ++   +++ +  + N  T+  +     +   +N A  +  +M E    PNT
Sbjct: 372 RDENLENAVKVLNTMIK-KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
            TY  L+     + + +    +   M  +   PN+ TY  +V   C  G    AYK+ K+
Sbjct: 431 VTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKE 490

Query: 452 GFHNG-LEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
                 L      Y +++++  +   +K+   L  KM + G+
Sbjct: 491 MVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532



 Score =  109 bits (272), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 16/316 (5%)

Query: 299 GSIKQAFEMLEEMVCQGWKP--NVYTHTA------LIDGLCKKGWTEKAFRLFLKLVRSE 350
           GS++    + + +    W    + Y H +      +ID   K    + A+ L + L++S 
Sbjct: 122 GSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHL-IDLMKSR 180

Query: 351 NNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK---AGNF 407
           N + ++ T+T +I  Y R    + A     RM++ G +P+   ++ +I    +   A   
Sbjct: 181 NVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEA 240

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           +  FD +    ++ F P++  Y  +V G C+ G + EA K+ K+    G+E +  TY+I+
Sbjct: 241 QSFFDSL----KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIV 296

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           I   C+   I +A  +F+ M  SG  P+  ++  L+ V  +  R  +    + +  + G 
Sbjct: 297 IDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGC 356

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
            P   TY  +I  +CR+ NL  A+K  + M    C  ++  + T+   + K+  ++ A  
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHR 416

Query: 588 LYDSMIEKGLIPCEVT 603
           +Y  M+E    P  VT
Sbjct: 417 MYSKMMEAKCEPNTVT 432



 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 133/285 (46%), Gaps = 4/285 (1%)

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           Y  +ID   K   F+ A+ L++LM       +I T+  ++    + G   EA        
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
             G   DK+ ++I+IS   ++    +A + F  + K   +PD+  YT L+  +CR   +S
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           E+E  F+E    G  P   TY+ +I   CR G ++ A   F  M D GC P++I +  L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332

Query: 574 SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK--- 630
               K  + ++   +Y+ M + G  P  +T   L   +C+ ++  +A+ +L+ + KK   
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392

Query: 631 LWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
           +   T  T+ R +  +R V  A   + K+++     N VT    M
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437



 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 112/230 (48%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G++  A ++  +M + G  PN  T N +M++  + G  +    ++ +M   G  PD+ +Y
Sbjct: 304 GQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITY 363

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             ++ A+C+  N+  A K L+ M+ +   V+ ++F  I     +K     A R + K  +
Sbjct: 364 NFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME 423

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
              +PN + +  ++       S     +M +EM  +  +PNV T+  L+   C  G    
Sbjct: 424 AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNN 483

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
           A++LF ++V  +   P++  Y  ++    R  +L + E L+ +M ++GL+
Sbjct: 484 AYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLV 533


>AT5G18475.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:6129255-6130775 REVERSE
           LENGTH=506
          Length = 506

 Score =  156 bits (394), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 159/328 (48%), Gaps = 2/328 (0%)

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK-PNVYTHTA 325
           +R L  + K  ++GL+PN   F  +++  CK G I  AF ++EEM   G   PN  T++ 
Sbjct: 179 SRKLLLYAK-HNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYST 237

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           L+D L     +++A  LF  ++  E   P+ +T+  MING+CR  ++ RA+ +L  MK+ 
Sbjct: 238 LMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKN 297

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           G  PN   Y+ L++G CK G  + A    + + + G   +   Y  +++  C+ G   EA
Sbjct: 298 GCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEA 357

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            K+L +   +   AD +TYN+++     +   ++AL +  +    G+  +  SY  ++  
Sbjct: 358 MKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNA 417

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
            C    + ++  F       G  P   T+  ++   C  G   + ++        G +P 
Sbjct: 418 LCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPG 477

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMI 593
             ++G ++  +CK+ KL     L DS++
Sbjct: 478 PKSWGAVVESICKERKLVHVFELLDSLV 505



 Score =  142 bits (358), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 188/422 (44%), Gaps = 3/422 (0%)

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
           +G + ++A+Y V++    +    L  D  L  M         + F  ++  F       +
Sbjct: 83  KGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDK 142

Query: 269 ALRYFHKFSDMG-LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ-GWKPNVYTHTAL 326
            +  F+    +  +KP+L   ++ +  L   G +  + ++L       G +PN      L
Sbjct: 143 VMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNIL 202

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA-EMLLGRMKEQ 385
           +   CK G    AF +  ++ RS  + PN +TY+ +++      +   A E+    + ++
Sbjct: 203 VKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKE 262

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           G+ P+  T+  +I+G C+AG  ERA  +++ M + G +PN+  Y+A+++G CK G++QEA
Sbjct: 263 GISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA 322

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            +   +    GL+ D V Y  L++  C+  +  +A+ L  +M  S  + D  +Y  ++  
Sbjct: 323 KQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRG 382

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
              E R  E+    ++    G    K +Y  ++   C  G L  A+KF   MS+ G  P 
Sbjct: 383 LSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPH 442

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD 625
              +  L+  LC+    +    +    +  GLIP   +   +    CK         +LD
Sbjct: 443 HATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLD 502

Query: 626 RL 627
            L
Sbjct: 503 SL 504



 Score =  139 bits (349), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 160/324 (49%), Gaps = 3/324 (0%)

Query: 167 MVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV-HPDSASYRVMVVAY 225
           +++  HN G+ PNT   N+++K  C+ G +++A  + EEM   G+ +P+S +Y  ++   
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242

Query: 226 CKMGNVLEADKWLSVMLDR-GFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPN 284
                  EA +    M+ + G   D  +F ++I+ FC  G   RA +        G  PN
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302

Query: 285 LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 344
           + N+++++ G CK G I++A +  +E+   G K +   +T L++  C+ G T++A +L L
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL-L 361

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
             +++   + + LTY  ++ G   + +   A  +L +   +G+  N  +Y  +++  C  
Sbjct: 362 GEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN 421

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G  E+A   +++MS  G  P+  T+N +V  LC+ G  +   ++L      GL     ++
Sbjct: 422 GELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSW 481

Query: 465 NILISEHCKQADIKQALALFSKMA 488
             ++   CK+  +     L   + 
Sbjct: 482 GAVVESICKERKLVHVFELLDSLV 505



 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 168/373 (45%), Gaps = 17/373 (4%)

Query: 317 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAE 376
           K    +H + +  + ++   +    +F K  + +    N  TY+ +++   R  K    +
Sbjct: 50  KTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVD 109

Query: 377 MLLGRMK------EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
            +L +MK      ++ L  N   + +  D H K       F+L+ +++R    P++   +
Sbjct: 110 AILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEM---FNLIQVIAR--VKPSLNAIS 164

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHN-GLEADKVTYNILISEHCKQADIKQALALFSKMAK 489
             ++ L   G V  + K+L    HN GL+ +   +NIL+  HCK  DI  A  +  +M +
Sbjct: 165 TCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKR 224

Query: 490 SGIQ-PDIHSYTTLIAVFCREKRMSESEMFFEEAV-RFGFIPTKRTYTSMICGYCREGNL 547
           SGI  P+  +Y+TL+       R  E+   FE+ + + G  P   T+  MI G+CR G +
Sbjct: 225 SGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEV 284

Query: 548 TMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
             A K    M  +GC P+   Y  L++G CK  K+ EA+  +D + + GL    V   TL
Sbjct: 285 ERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTL 344

Query: 608 AYEYCKIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDF 664
              +C+  +   AM +L  ++    +    T   ++R L SE +   A     +      
Sbjct: 345 MNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGV 404

Query: 665 HVNRVTLAAFMTA 677
           H+N+ +    + A
Sbjct: 405 HLNKGSYRIILNA 417



 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 128/270 (47%), Gaps = 6/270 (2%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEM-HNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEE 205
           +M C+   FA   R KEAVE+  +M   +G+ P+  T N+++   C  G V+ A+ + + 
Sbjct: 238 LMDCL---FAH-SRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDF 293

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           M   G +P+  +Y  ++  +CK+G + EA +    +   G  +D   +T +++ FC  G 
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
              A++   +      + + + +  ++ GL   G  ++A +ML++   +G   N  ++  
Sbjct: 354 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 413

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           +++ LC  G  EKA + FL ++      P+  T+  ++   C          +L      
Sbjct: 414 ILNALCCNGELEKAVK-FLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRI 472

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
           GLIP   ++  +++  CK       F+L++
Sbjct: 473 GLIPGPKSWGAVVESICKERKLVHVFELLD 502



 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 88/166 (53%), Gaps = 4/166 (2%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           +M C  R+    G   EA++++ EM       +T T N++++     G  + A  + ++ 
Sbjct: 344 LMNCFCRN----GETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQW 399

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
            + GVH +  SYR+++ A C  G + +A K+LSVM +RG    +A++  ++   CE G+ 
Sbjct: 400 GSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYT 459

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
              +R    F  +GL P   ++ +++E +CK   +   FE+L+ +V
Sbjct: 460 EIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505


>AT1G11710.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:3948886-3950859 FORWARD
           LENGTH=657
          Length = 657

 Score =  155 bits (391), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 203/426 (47%), Gaps = 41/426 (9%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM---S 207
           ++ SF +  +L EA+ + + M   G+ PN  + N+++  AC+ G + +A  L  +M   S
Sbjct: 224 VIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMS 283

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
              V P++ +Y  ++  +CK G +  A++    M+  G   +  ++  ++  +   G + 
Sbjct: 284 GNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSD 343

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
            ALR   + +  GL  N + + S++  L   G I+ A  +L +M  +  + + +T   ++
Sbjct: 344 EALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVV 403

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
            GLC+ G+ ++A   F + +  +    +++ +  +++ + RD KL  A+ +LG M  QGL
Sbjct: 404 RGLCRNGYVKEAVE-FQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGL 462

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
             +  ++ TLIDG+ K G  ERA ++ + M +   + N+  YN+IV+GL K+G    A  
Sbjct: 463 SLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEA 522

Query: 448 M-------------------LKDGFHNGLEADK----------------VTYNILISEHC 472
           +                   LK G  N  EAD                 VT+NI+I+  C
Sbjct: 523 VVNAMEIKDIVTYNTLLNESLKTG--NVEEADDILSKMQKQDGEKSVSLVTFNIMINHLC 580

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           K    ++A  +   M + G+ PD  +Y TLI  F + +   +     +  +  G  P + 
Sbjct: 581 KFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEH 640

Query: 533 TYTSMI 538
            Y S++
Sbjct: 641 IYLSIV 646



 Score =  154 bits (389), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 188/384 (48%), Gaps = 11/384 (2%)

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
           R  + + +   +G   N+  F  +I   CK   + +A  +   M+  G  PNV +   +I
Sbjct: 201 RFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMI 260

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENN--KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           DG CK G    A +L  K+     N   PN +TY ++ING+C+  +L+ AE + G M + 
Sbjct: 261 DGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKS 320

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           G+  N  TY  L+D + +AG+ + A  L + M+ +G   N   YN+IV  L  +G ++ A
Sbjct: 321 GVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGA 380

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
             +L+D     ++ D+ T  I++   C+   +K+A+    ++++  +  DI  + TL+  
Sbjct: 381 MSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHH 440

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           F R+K+++ ++      +  G      ++ ++I GY +EG L  A++ +  M       +
Sbjct: 441 FVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSN 500

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD 625
            + Y ++++GL K+     A  + ++M  K +    VT  TL  E  K  +   A  IL 
Sbjct: 501 LVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI----VTYNTLLNESLKTGNVEEADDILS 556

Query: 626 RL-----EKKLWIRTATTLVRKLC 644
           ++     EK + + T   ++  LC
Sbjct: 557 KMQKQDGEKSVSLVTFNIMINHLC 580



 Score =  154 bits (389), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 226/551 (41%), Gaps = 121/551 (21%)

Query: 124 FMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTL 183
            +R Y  C +S           +V   +VR+  + G  + A E++ +   +G   +   L
Sbjct: 137 LIRSYQACGSS----------PDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHAL 186

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
           N  M     +  +D    +++EM + G   +  ++ +++ ++CK   + EA      ML 
Sbjct: 187 NNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLK 246

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG---LKPNLINFTSMIEGLCKRGS 300
            G   +  SF ++I   C+ G    AL+   K   M    + PN + + S+I G CK G 
Sbjct: 247 CGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGR 306

Query: 301 IKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL------------------ 342
           +  A  +  +MV  G   N  T+ AL+D   + G +++A RL                  
Sbjct: 307 LDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNS 366

Query: 343 ----------------FLKLVRSENNKPNVLTYTAMINGYC------------------- 367
                            L+ + S+N + +  T   ++ G C                   
Sbjct: 367 IVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKK 426

Query: 368 ----------------RDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAF 411
                           RD KL  A+ +LG M  QGL  +  ++ TLIDG+ K G  ERA 
Sbjct: 427 LVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERAL 486

Query: 412 DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE-ADKVTYNILISE 470
           ++ + M +   + N+  YN+IV+GL K+G    A  ++     N +E  D VTYN L++E
Sbjct: 487 EIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVV-----NAMEIKDIVTYNTLLNE 541

Query: 471 HCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPT 530
             K  ++++A  + SKM K     D     +L+                           
Sbjct: 542 SLKTGNVEEADDILSKMQKQ----DGEKSVSLV--------------------------- 570

Query: 531 KRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD 590
             T+  MI   C+ G+   A +    M + G VPDSI YGTLI+   K    ++   L+D
Sbjct: 571 --TFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHD 628

Query: 591 SMIEKGLIPCE 601
            +I +G+ P E
Sbjct: 629 YLILQGVTPHE 639



 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 130/308 (42%), Gaps = 54/308 (17%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVM-------KIACE 192
           N+Q        +VR     G +KEAVE   ++  + +V +    N +M       K+AC 
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLAC- 449

Query: 193 MGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNAS 252
                 A  +   M  +G+  D+ S+  ++  Y K G +                     
Sbjct: 450 ------ADQILGSMLVQGLSLDAISFGTLIDGYLKEGKL--------------------- 482

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
                          RAL  +     M    NL+ + S++ GL KRG    A  ++  M 
Sbjct: 483 --------------ERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME 528

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP-NVLTYTAMINGYCRDDK 371
            +    ++ T+  L++   K G  E+A  +  K+ + +  K  +++T+  MIN  C+   
Sbjct: 529 IK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGS 584

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
             +A+ +L  M E+G++P++ TY TLI    K  + E+  +L + +  +G +P+   Y +
Sbjct: 585 YEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLS 644

Query: 432 IVDGLCKK 439
           IV  L  +
Sbjct: 645 IVRPLLDR 652


>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:20459238-20461504 FORWARD
           LENGTH=723
          Length = 723

 Score =  149 bits (377), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 189/389 (48%), Gaps = 7/389 (1%)

Query: 197 DYAQYLFEEMSARGVHPDSASYRVMVVAYCKMG-NVLEADKWLSVMLDRGFLVDNASFTL 255
           D A  ++E M    V+PD+ +  +++    K G +  E  +    M ++G       F  
Sbjct: 290 DDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGG 349

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           ++  FC++G    AL    +    G++ N I + ++++   K   I++   +  EM  +G
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG 409

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR- 374
            KP+  T+  L+D   ++   +      L+ +     +PNV +YT +I+ Y R  K++  
Sbjct: 410 LKPSAATYNILMDAYARRMQPD-IVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM 468

Query: 375 -AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
            A+  L RMK+ GL P++++YT LI  +  +G  E+A+     M +EG  P++ TY +++
Sbjct: 469 AADAFL-RMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVL 527

Query: 434 DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ 493
           D   + G   +  ++ K      ++  ++TYN L+    KQ    +A  + S+ +K G+Q
Sbjct: 528 DAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQ 587

Query: 494 PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKF 553
           P + +Y  L+  + R  + ++     +E       P   TY++MI  + R  +   A  F
Sbjct: 588 PSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF-F 646

Query: 554 FHR-MSDHGCVPDSIAYGTLISGLCKQSK 581
           +H+ M   G VPD  +Y  L + L  ++K
Sbjct: 647 YHKMMVKSGQVPDPRSYEKLRAILEDKAK 675



 Score =  146 bits (369), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 189/400 (47%), Gaps = 20/400 (5%)

Query: 125 MRLYIVCATSLIGNGNLQKAHEVMQCM---------------VRSFAEIGRLKEAVEMVF 169
           +RLY    + L  +     A EV + M               + +  + GR  + V  +F
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIF 332

Query: 170 E-MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKM 228
           E M  +G+  +      ++K  C+ GL + A  +  EM  +G+  ++  Y  ++ AY K 
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392

Query: 229 GNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINF 288
            ++ E +   + M D+G     A++ +++  +  +           +  D+GL+PN+ ++
Sbjct: 393 NHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSY 452

Query: 289 TSMIE--GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 346
           T +I   G  K+ S   A   L  M   G KP+ +++TALI      GW EKA+  F ++
Sbjct: 453 TCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511

Query: 347 VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN 406
            + E  KP+V TYT++++ + R     +   +   M  + +     TY TL+DG  K G 
Sbjct: 512 CK-EGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
           +  A D+++  S+ G  P++ TYN +++   + G+  +  ++LK+     L+ D +TY+ 
Sbjct: 571 YIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYST 630

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
           +I    +  D K+A      M KSG  PD  SY  L A+ 
Sbjct: 631 MIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAIL 670



 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 193/476 (40%), Gaps = 45/476 (9%)

Query: 192 EMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNA 251
           E G V    Y +E MS +   P  AS R   V +  +G    AD  L             
Sbjct: 214 ESGFVKSCLYFYEWMSLQ--EPSLASPRACSVLFTLLGRERMADYIL------------- 258

Query: 252 SFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM 311
              L++S   +K           +F D+ L      + + I GL        A+E+ E M
Sbjct: 259 ---LLLSNLPDK----------EEFRDVRL------YNAAISGLSASQRYDDAWEVYEAM 299

Query: 312 VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK 371
                 P+  T   LI  L K G + K      + +  +  K +   +  ++  +C +  
Sbjct: 300 DKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGL 359

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
              A ++   M+++G+  NT  Y TL+D + K+ + E    L   M  +G  P+  TYN 
Sbjct: 360 KEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNI 419

Query: 432 IVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALA-LFSKMAKS 490
           ++D   ++ +      +L++    GLE +  +Y  LIS + +   +    A  F +M K 
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV 479

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           G++P  HSYT LI  +       ++   FEE  + G  P+  TYTS++  + R G+    
Sbjct: 480 GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKL 539

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
           ++ +  M         I Y TL+ G  KQ    EAR +     + GL P  +T   L   
Sbjct: 540 MEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNA 599

Query: 611 Y------CKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLL 660
           Y       K+      M  L+     +   T +T++      R     A F+HK++
Sbjct: 600 YARGGQDAKLPQLLKEMAALNLKPDSI---TYSTMIYAFVRVRDFKR-AFFYHKMM 651


>AT5G11310.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:3606490-3608409 FORWARD
           LENGTH=602
          Length = 602

 Score =  146 bits (369), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 19/381 (4%)

Query: 236 KWLSVMLDRGFLVDNASFTLIISEFCE-KGFATRALRYFHKF-SDMGLKPNLIN---FTS 290
           KW    +  GF +  + F  +++  C+ + F       F +  SD G   NL++   F  
Sbjct: 123 KWAE--MKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEG--SNLVSADTFIV 178

Query: 291 MIEGLCKRGSIKQAFEMLE-----EMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK 345
           +I    + G ++QA    E     E VC+     +     L+D LCK+G   +A  ++L+
Sbjct: 179 LIRRYARAGMVQQAIRAFEFARSYEPVCKS-ATELRLLEVLLDALCKEGHVREA-SMYLE 236

Query: 346 LV---RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
            +      N  P+V  +  ++NG+ R  KL +AE L   MK   + P   TY TLI+G+C
Sbjct: 237 RIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYC 296

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           +    + A +++  M       N   +N I+DGL + GR+ EA  M++  F        V
Sbjct: 297 RMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIV 356

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           TYN L+   CK  D+  A  +   M   G+ P   +Y      F +  +  E    + + 
Sbjct: 357 TYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKL 416

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
           +  G  P + TY  ++   C +G L++A++    M + G  PD +    LI  LC+   L
Sbjct: 417 IEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEML 476

Query: 583 DEARGLYDSMIEKGLIPCEVT 603
           +EA   +D+ + +G+IP  +T
Sbjct: 477 EEAFEEFDNAVRRGIIPQYIT 497



 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 12/355 (3%)

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP------NLINFTSMIEGLCKRGS 300
           LV   +F ++I  +   G   +A+R F +F+    +P       L     +++ LCK G 
Sbjct: 170 LVSADTFIVLIRRYARAGMVQQAIRAF-EFA-RSYEPVCKSATELRLLEVLLDALCKEGH 227

Query: 301 IKQAFEMLEEM---VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
           +++A   LE +   +   W P+V     L++G  +    ++A +L+ ++ ++ N KP V+
Sbjct: 228 VREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM-KAMNVKPTVV 286

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           TY  +I GYCR  ++  A  +L  MK   +  N   +  +IDG  +AG    A  +M   
Sbjct: 287 TYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERF 346

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
                 P I TYN++V   CK G +  A K+LK     G++    TYN       K    
Sbjct: 347 FVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKT 406

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
           ++ + L+ K+ ++G  PD  +Y  ++ + C + ++S +    +E    G  P   T T +
Sbjct: 407 EEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTML 466

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           I   CR   L  A + F      G +P  I +  + +GL  +   D A+ L   M
Sbjct: 467 IHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521



 Score =  119 bits (297), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 143/312 (45%), Gaps = 14/312 (4%)

Query: 255 LIISEFCEKGFATRALRYFHKFS---DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM 311
           +++   C++G    A  Y  +     D    P++  F  ++ G  +   +KQA ++ EEM
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276

Query: 312 VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK 371
                KP V T+  LI+G C+    + A  +  ++  +E  + N + +  +I+G     +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEM-EINFMVFNPIIDGLGEAGR 335

Query: 372 LNRAEMLLGRMK-----EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
           L+ A   LG M+     E G  P   TY +L+   CKAG+   A  ++ +M   G  P  
Sbjct: 336 LSEA---LGMMERFFVCESG--PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTT 390

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK 486
            TYN       K  + +E   +       G   D++TY++++   C+   +  A+ +  +
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKE 450

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           M   GI PD+ + T LI + CR + + E+   F+ AVR G IP   T+  +  G   +G 
Sbjct: 451 MKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGM 510

Query: 547 LTMAIKFFHRMS 558
             MA +    MS
Sbjct: 511 SDMAKRLSSLMS 522



 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 141/305 (46%), Gaps = 4/305 (1%)

Query: 147 VMQCMVRSFAEIGRLKEA---VEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLF 203
           +++ ++ +  + G ++EA   +E +    +   VP+ +  N+++        +  A+ L+
Sbjct: 214 LLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLW 273

Query: 204 EEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEK 263
           EEM A  V P   +Y  ++  YC+M  V  A + L  M      ++   F  II    E 
Sbjct: 274 EEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEA 333

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
           G  + AL    +F      P ++ + S+++  CK G +  A ++L+ M+ +G  P   T+
Sbjct: 334 GRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTY 393

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
                   K   TE+   L+ KL+ +  + P+ LTY  ++   C D KL+ A  +   MK
Sbjct: 394 NHFFKYFSKHNKTEEGMNLYFKLIEA-GHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMK 452

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
            +G+ P+  T T LI   C+    E AF+  +   R G  P   T+  I +GL  KG   
Sbjct: 453 NRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSD 512

Query: 444 EAYKM 448
            A ++
Sbjct: 513 MAKRL 517



 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 141/332 (42%), Gaps = 12/332 (3%)

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVRSE--NNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
           ++++ LCK    E A+ L    VRS+  +N  +  T+  +I  Y R   + +A       
Sbjct: 140 SVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFA 199

Query: 383 KEQGLIPNTNT----YTTLIDGHCKAGNFERA---FDLMNLMSREGFSPNICTYNAIVDG 435
           +    +  + T       L+D  CK G+   A    + +       + P++  +N +++G
Sbjct: 200 RSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNG 259

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
             +  ++++A K+ ++     ++   VTY  LI  +C+   ++ A+ +  +M  + ++ +
Sbjct: 260 WFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEIN 319

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
              +  +I       R+SE+    E        PT  TY S++  +C+ G+L  A K   
Sbjct: 320 FMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILK 379

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKID 615
            M   G  P +  Y        K +K +E   LY  +IE G  P  +T   +    C+  
Sbjct: 380 MMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDG 439

Query: 616 DCCSAMVILDRLEKK---LWIRTATTLVRKLC 644
               AM +   ++ +     + T T L+  LC
Sbjct: 440 KLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLC 471



 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 4/236 (1%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   ++    E GRL EA+ M+         P   T N ++K  C+ G +  A  + + M
Sbjct: 322 VFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMM 381

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
             RGV P + +Y      + K     E       +++ G   D  ++ LI+   CE G  
Sbjct: 382 MTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKL 441

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
           + A++   +  + G+ P+L+  T +I  LC+   +++AFE  +  V +G  P   T   +
Sbjct: 442 SLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMI 501

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK----LNRAEML 378
            +GL  KG ++ A RL   +    ++K    TY   ++     D+    L+RAE +
Sbjct: 502 DNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNTYREAVDAPPDKDRRKSILHRAEAM 557



 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 6/253 (2%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  +  + R++ A+E++ EM    M  N    N ++    E G +  A  + E      
Sbjct: 291 LIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCE 350

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P   +Y  +V  +CK G++  A K L +M+ RG      ++      F +       +
Sbjct: 351 SGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGM 410

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             + K  + G  P+ + +  +++ LC+ G +  A ++ +EM  +G  P++ T T LI  L
Sbjct: 411 NLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLL 470

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY---CRDDKLNRAEMLLGRMKEQGL 387
           C+    E+AF  F   VR     P  +T+  + NG       D   R   L+  +     
Sbjct: 471 CRLEMLEEAFEEFDNAVR-RGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKK 529

Query: 388 IPNTNTYTTLIDG 400
           +P  NTY   +D 
Sbjct: 530 LP--NTYREAVDA 540



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 141/340 (41%), Gaps = 28/340 (8%)

Query: 370 DKLNRAEMLL------GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS 423
           D+L+ + MLL        MK  G   + + + ++++  CKA  FE A+ L+    R    
Sbjct: 109 DRLSSSPMLLHSVFKWAEMK-PGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEG 167

Query: 424 PNIC---TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA------DKVTYNILISEHCKQ 474
            N+    T+  ++    + G VQ+A +  +  F    E       +     +L+   CK+
Sbjct: 168 SNLVSADTFIVLIRRYARAGMVQQAIRAFE--FARSYEPVCKSATELRLLEVLLDALCKE 225

Query: 475 ADIKQALALFSKMA---KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTK 531
             +++A     ++     S   P +  +  L+  + R +++ ++E  +EE       PT 
Sbjct: 226 GHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTV 285

Query: 532 RTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
            TY ++I GYCR   + +A++    M       + + +  +I GL +  +L EA G+ + 
Sbjct: 286 VTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMER 345

Query: 592 MI--EKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKLCSE 646
               E G  P  VT  +L   +CK  D   A  IL  +  +    T TT     +     
Sbjct: 346 FFVCESG--PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKH 403

Query: 647 RKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYAL 686
            K       + KL++     +R+T    +    E  K +L
Sbjct: 404 NKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSL 443


>AT1G74750.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:28086800-28089367 FORWARD
           LENGTH=855
          Length = 855

 Score =  146 bits (369), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 155/305 (50%), Gaps = 8/305 (2%)

Query: 315 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR 374
           G+K + +T+T ++  L +     +  +L  ++VR +  KPN +TY  +I+ Y R + L  
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVR-DGCKPNTVTYNRLIHSYGRANYLKE 412

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVD 434
           A  +  +M+E G  P+  TY TLID H KAG  + A D+   M   G SP+  TY+ I++
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472

Query: 435 GLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP 494
            L K G +  A+++  +    G   + VT+NI+I+ H K  + + AL L+  M  +G QP
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532

Query: 495 DIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFF 554
           D  +Y+ ++ V      + E+E  F E  R  ++P +  Y  ++  + + GN+  A +++
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592

Query: 555 HRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKI 614
             M   G  P+     +L+S   +  ++ EA  L  SM+  GL P   T       Y  +
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQT-------YTLL 645

Query: 615 DDCCS 619
             CC+
Sbjct: 646 LSCCT 650



 Score =  107 bits (266), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 104/219 (47%)

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           ++ G   + +TYTT++    +A  F     L++ M R+G  PN  TYN ++    +   +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           +EA  +       G E D+VTY  LI  H K   +  A+ ++ +M ++G+ PD  +Y+ +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGC 562
           I    +   +  +   F E V  G  P   T+  MI  + +  N   A+K +  M + G 
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCE 601
            PD + Y  ++  L     L+EA G++  M  K  +P E
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 569



 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 155/324 (47%), Gaps = 25/324 (7%)

Query: 108 ALSFFHWAIGYSRFRHFMRLYIVCATSLIGN-GNLQKAHEV---MQCMVR---------- 153
           AL FF+W      F+H    Y    T+++GN G  ++  E+   +  MVR          
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTY----TTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTY 397

Query: 154 -----SFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
                S+     LKEA+ +  +M   G  P+  T   ++ I  + G +D A  +++ M  
Sbjct: 398 NRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQE 457

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G+ PD+ +Y V++    K G++  A +    M+ +G   +  +F ++I+   +      
Sbjct: 458 AGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYET 517

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           AL+ +    + G +P+ + ++ ++E L   G +++A  +  EM  + W P+   +  L+D
Sbjct: 518 ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 577

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
              K G  +KA++ +  ++++   +PNV T  ++++ + R  +++ A  LL  M   GL 
Sbjct: 578 LWGKAGNVDKAWQWYQAMLQA-GLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLH 636

Query: 389 PNTNTYTTLIDGHCKA-GNFERAF 411
           P+  TYT L+     A  NF+  F
Sbjct: 637 PSLQTYTLLLSCCTDARSNFDMGF 660


>AT2G35130.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:14807589-14810072 REVERSE
           LENGTH=613
          Length = 613

 Score =  145 bits (366), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 194/431 (45%), Gaps = 44/431 (10%)

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            PD   + +++ AY +     EA+     +L+  ++    ++ L+I  +C  G   RA  
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233

Query: 272 YFHKFSDMGLKPNLINFT---SMIEGLCKR-GSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
              +  +  + P  I  T   + IEGL KR G+ ++A ++ + M     KP   T+  +I
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           +   K   +  +++L+ ++ RS   KPN+ TYTA++N + R+    +AE +  +++E GL
Sbjct: 294 NLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            P+   Y  L++ + +AG    A ++ +LM   G  P+  +YN +VD   + G   +A  
Sbjct: 353 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 412

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD------------ 495
           + ++    G+     ++ +L+S + K  D+ +  A+  +M+++G++PD            
Sbjct: 413 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 472

Query: 496 -----------------------IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
                                  I +Y  LI ++ +   +   E  F E     F P   
Sbjct: 473 RLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVV 532

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA----RGL 588
           T+TS I  Y R+      ++ F  M D GC PD      L+S    + ++++     R +
Sbjct: 533 TWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592

Query: 589 YDSMIEKGLIP 599
           +  +    L+P
Sbjct: 593 HKGVTVSSLVP 603



 Score =  133 bits (334), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 168/379 (44%), Gaps = 12/379 (3%)

Query: 236 KWLSVML-------DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINF 288
           KW S++L          F  D   F L+I  + +K     A   + +  +    P    +
Sbjct: 156 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTY 215

Query: 289 TSMIEGLCKRGSIKQAFEMLEEMVCQGWKP---NVYTHTALIDGLCK-KGWTEKAFRLFL 344
             +I+  C  G I++A  +L EM      P    V  + A I+GL K KG TE+A  +F 
Sbjct: 216 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQ 275

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
           ++ R +  KP   TY  MIN Y +  K   +  L   M+     PN  TYT L++   + 
Sbjct: 276 RMKR-DRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 334

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G  E+A ++   +  +G  P++  YNA+++   + G    A ++     H G E D+ +Y
Sbjct: 335 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 394

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           NI++  + +      A A+F +M + GI P + S+  L++ + + + +++ E   +E   
Sbjct: 395 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 454

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
            G  P      SM+  Y R G  T   K    M +  C  D   Y  LI+   K   L+ 
Sbjct: 455 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 514

Query: 585 ARGLYDSMIEKGLIPCEVT 603
              L+  + EK   P  VT
Sbjct: 515 IEELFVELKEKNFRPDVVT 533



 Score =  127 bits (319), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 181/387 (46%), Gaps = 5/387 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ ++ +  + KEA  +  ++     VP   T  L++K  C  GL++ A+ +  EM    
Sbjct: 183 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHH 242

Query: 211 VHPDSAS---YRVMVVAYCK-MGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
           V P +     Y   +    K  GN  EA      M          ++ L+I+ + +   +
Sbjct: 243 VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 302

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             + + + +      KPN+  +T+++    + G  ++A E+ E++   G +P+VY + AL
Sbjct: 303 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 362

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           ++   + G+   A  +F  L++    +P+  +Y  M++ Y R    + AE +   MK  G
Sbjct: 363 MESYSRAGYPYGAAEIF-SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 421

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           + P   ++  L+  + KA +  +   ++  MS  G  P+    N++++   + G+  +  
Sbjct: 422 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKME 481

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
           K+L +  +    AD  TYNILI+ + K   +++   LF ++ +   +PD+ ++T+ I  +
Sbjct: 482 KILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 541

Query: 507 CREKRMSESEMFFEEAVRFGFIPTKRT 533
            R+K   +    FEE +  G  P   T
Sbjct: 542 SRKKLYVKCLEVFEEMIDSGCAPDGGT 568



 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 6/283 (2%)

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAG 405
           ++R  + +P+V+ +  +I+ Y +  +   AE L  ++ E   +P  +TY  LI  +C AG
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 226

Query: 406 NFERAFDLMNLMSREGFSP---NICTYNAIVDGLCK-KGRVQEAYKMLKDGFHNGLEADK 461
             ERA  ++  M     SP    +  YNA ++GL K KG  +EA  + +    +  +   
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
            TYN++I+ + K +    +  L+ +M     +P+I +YT L+  F RE    ++E  FE+
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346

Query: 522 AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
               G  P    Y +++  Y R G    A + F  M   GC PD  +Y  ++    +   
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406

Query: 582 LDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDC--CSAMV 622
             +A  +++ M   G+ P   + + L   Y K  D   C A+V
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 449



 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 146/332 (43%), Gaps = 3/332 (0%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G  +EA+++   M      P T+T NL++ +  +      +  L+ EM +    P+  +Y
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             +V A+ + G   +A++    + + G   D   +  ++  +   G+   A   F     
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
           MG +P+  ++  M++   + G    A  + EEM   G  P + +H  L+    K     K
Sbjct: 385 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 444

Query: 339 AFRLFLKLVRSENN-KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
              +  ++  SEN  +P+     +M+N Y R  +  + E +L  M+      + +TY  L
Sbjct: 445 CEAIVKEM--SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 502

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           I+ + KAG  ER  +L   +  + F P++ T+ + +    +K    +  ++ ++   +G 
Sbjct: 503 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 562

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAK 489
             D  T  +L+S    +  ++Q  ++   M K
Sbjct: 563 APDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594



 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/315 (20%), Positives = 139/315 (44%), Gaps = 8/315 (2%)

Query: 146 EVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEE 205
           E    M+  + +  +   + ++  EM +    PN  T   ++      GL + A+ +FE+
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           +   G+ PD   Y  ++ +Y + G    A +  S+M   G   D AS+ +++  +   G 
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
            + A   F +   +G+ P + +   ++    K   + +   +++EM   G +P+ +   +
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 466

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKP---NVLTYTAMINGYCRDDKLNRAEMLLGRM 382
           +++   + G     F    K++    N P   ++ TY  +IN Y +   L R E L   +
Sbjct: 467 MLNLYGRLG----QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           KE+   P+  T+T+ I  + +   + +  ++   M   G +P+  T   ++     + +V
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 582

Query: 443 QEAYKMLKDGFHNGL 457
           ++   +L+   H G+
Sbjct: 583 EQVTSVLRT-MHKGV 596



 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 4/179 (2%)

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
           +  + D + +N+LI  + ++   K+A +L+ ++ +S   P   +Y  LI  +C    +  
Sbjct: 171 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 230

Query: 515 SEMFFEEAVRFGFIPTK---RTYTSMICGYC-REGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           +E+   E       P       Y + I G   R+GN   AI  F RM    C P +  Y 
Sbjct: 231 AEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN 290

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
            +I+   K SK   +  LY  M      P   T   L   + +   C  A  I ++L++
Sbjct: 291 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349


>AT1G18900.2 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:6529778-6532360 FORWARD
           LENGTH=860
          Length = 860

 Score =  145 bits (366), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 184/377 (48%), Gaps = 18/377 (4%)

Query: 243 DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIK 302
           + G +V+N S   ++  F     A  AL+      ++GL+ +      +++ +   G+  
Sbjct: 297 NSGHIVENVSS--VLRRFRWGPAAEEALQ------NLGLRIDAYQANQVLKQMNDYGNAL 348

Query: 303 QAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM 362
             F  L+     G+K + +T+T ++  L +        +L  ++VR +  +PN +TY  +
Sbjct: 349 GFFYWLKRQ--PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR-DGCQPNTVTYNRL 405

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGF 422
           I+ Y R + LN A  +  +M+E G  P+  TY TLID H KAG  + A D+   M   G 
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465

Query: 423 SPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALA 482
           SP+  TY+ I++ L K G +  A+K+  +    G   + VTYNI++  H K  + + AL 
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525

Query: 483 LFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYC 542
           L+  M  +G +PD  +Y+ ++ V      + E+E  F E  +  +IP +  Y  ++  + 
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585

Query: 543 REGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEV 602
           + GN+  A +++  M   G  P+     +L+S   + +K+ EA  L  +M+  GL P   
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645

Query: 603 TRITLAYEYCKIDDCCS 619
           T       Y  +  CC+
Sbjct: 646 T-------YTLLLSCCT 655



 Score =  113 bits (282), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 205/474 (43%), Gaps = 72/474 (15%)

Query: 108 ALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKA----HEVMQCMVR---------- 153
           AL FF+W      F+H    Y    T+++GN    K     ++++  MVR          
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTY----TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402

Query: 154 -----SFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
                S+     L EA+ +  +M   G  P+  T   ++ I  + G +D A  +++ M A
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G+ PD+ +Y V++    K G++  A K    M+D+G   +  ++ +++    +      
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           AL+ +    + G +P+ + ++ ++E L   G +++A  +  EM  + W P+   +  L+D
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
              K G  EKA++ +  ++ +   +PNV T  ++++ + R +K+  A  LL  M   GL 
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHA-GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641

Query: 389 PNTNTYTTLI----DGHCK--------------------------AGN-----FERAFDL 413
           P+  TYT L+    DG  K                          AG         A + 
Sbjct: 642 PSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNF 701

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML-----KDGFHNGLEADKVTYNIL- 467
           ++LM  E         +A+VD L K G+ +EA  +      K+ F + L     +Y ++ 
Sbjct: 702 LDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLIN 761

Query: 468 ---ISEHCKQADIKQALALFSK-MAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
              +SE      + + LA F K M  SG  P   S   ++  + R  R++ + M
Sbjct: 762 LHVMSEGTAVTALSRTLAWFRKQMLASGTCP---SRIDIVTGWGRRSRVTGTSM 812


>AT1G18900.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:6529778-6532360 FORWARD
           LENGTH=860
          Length = 860

 Score =  145 bits (366), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 184/377 (48%), Gaps = 18/377 (4%)

Query: 243 DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIK 302
           + G +V+N S   ++  F     A  AL+      ++GL+ +      +++ +   G+  
Sbjct: 297 NSGHIVENVSS--VLRRFRWGPAAEEALQ------NLGLRIDAYQANQVLKQMNDYGNAL 348

Query: 303 QAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM 362
             F  L+     G+K + +T+T ++  L +        +L  ++VR +  +PN +TY  +
Sbjct: 349 GFFYWLKRQ--PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR-DGCQPNTVTYNRL 405

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGF 422
           I+ Y R + LN A  +  +M+E G  P+  TY TLID H KAG  + A D+   M   G 
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465

Query: 423 SPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALA 482
           SP+  TY+ I++ L K G +  A+K+  +    G   + VTYNI++  H K  + + AL 
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525

Query: 483 LFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYC 542
           L+  M  +G +PD  +Y+ ++ V      + E+E  F E  +  +IP +  Y  ++  + 
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585

Query: 543 REGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEV 602
           + GN+  A +++  M   G  P+     +L+S   + +K+ EA  L  +M+  GL P   
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645

Query: 603 TRITLAYEYCKIDDCCS 619
           T       Y  +  CC+
Sbjct: 646 T-------YTLLLSCCT 655



 Score =  113 bits (282), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 205/474 (43%), Gaps = 72/474 (15%)

Query: 108 ALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKA----HEVMQCMVR---------- 153
           AL FF+W      F+H    Y    T+++GN    K     ++++  MVR          
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTY----TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402

Query: 154 -----SFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
                S+     L EA+ +  +M   G  P+  T   ++ I  + G +D A  +++ M A
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G+ PD+ +Y V++    K G++  A K    M+D+G   +  ++ +++    +      
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           AL+ +    + G +P+ + ++ ++E L   G +++A  +  EM  + W P+   +  L+D
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
              K G  EKA++ +  ++ +   +PNV T  ++++ + R +K+  A  LL  M   GL 
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHA-GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641

Query: 389 PNTNTYTTLI----DGHCK--------------------------AGN-----FERAFDL 413
           P+  TYT L+    DG  K                          AG         A + 
Sbjct: 642 PSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNF 701

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML-----KDGFHNGLEADKVTYNIL- 467
           ++LM  E         +A+VD L K G+ +EA  +      K+ F + L     +Y ++ 
Sbjct: 702 LDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLIN 761

Query: 468 ---ISEHCKQADIKQALALFSK-MAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
              +SE      + + LA F K M  SG  P   S   ++  + R  R++ + M
Sbjct: 762 LHVMSEGTAVTALSRTLAWFRKQMLASGTCP---SRIDIVTGWGRRSRVTGTSM 812


>AT1G18900.3 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:6529778-6532541 FORWARD
           LENGTH=886
          Length = 886

 Score =  145 bits (366), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 184/377 (48%), Gaps = 18/377 (4%)

Query: 243 DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIK 302
           + G +V+N S   ++  F     A  AL+      ++GL+ +      +++ +   G+  
Sbjct: 297 NSGHIVENVSS--VLRRFRWGPAAEEALQ------NLGLRIDAYQANQVLKQMNDYGNAL 348

Query: 303 QAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM 362
             F  L+     G+K + +T+T ++  L +        +L  ++VR +  +PN +TY  +
Sbjct: 349 GFFYWLKRQ--PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR-DGCQPNTVTYNRL 405

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGF 422
           I+ Y R + LN A  +  +M+E G  P+  TY TLID H KAG  + A D+   M   G 
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465

Query: 423 SPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALA 482
           SP+  TY+ I++ L K G +  A+K+  +    G   + VTYNI++  H K  + + AL 
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525

Query: 483 LFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYC 542
           L+  M  +G +PD  +Y+ ++ V      + E+E  F E  +  +IP +  Y  ++  + 
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585

Query: 543 REGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEV 602
           + GN+  A +++  M   G  P+     +L+S   + +K+ EA  L  +M+  GL P   
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645

Query: 603 TRITLAYEYCKIDDCCS 619
           T       Y  +  CC+
Sbjct: 646 T-------YTLLLSCCT 655



 Score =  113 bits (282), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 205/474 (43%), Gaps = 72/474 (15%)

Query: 108 ALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKA----HEVMQCMVR---------- 153
           AL FF+W      F+H    Y    T+++GN    K     ++++  MVR          
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTY----TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402

Query: 154 -----SFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
                S+     L EA+ +  +M   G  P+  T   ++ I  + G +D A  +++ M A
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G+ PD+ +Y V++    K G++  A K    M+D+G   +  ++ +++    +      
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           AL+ +    + G +P+ + ++ ++E L   G +++A  +  EM  + W P+   +  L+D
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
              K G  EKA++ +  ++ +   +PNV T  ++++ + R +K+  A  LL  M   GL 
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHA-GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641

Query: 389 PNTNTYTTLI----DGHCK--------------------------AGN-----FERAFDL 413
           P+  TYT L+    DG  K                          AG         A + 
Sbjct: 642 PSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNF 701

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML-----KDGFHNGLEADKVTYNIL- 467
           ++LM  E         +A+VD L K G+ +EA  +      K+ F + L     +Y ++ 
Sbjct: 702 LDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLIN 761

Query: 468 ---ISEHCKQADIKQALALFSK-MAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
              +SE      + + LA F K M  SG  P   S   ++  + R  R++ + M
Sbjct: 762 LHVMSEGTAVTALSRTLAWFRKQMLASGTCP---SRIDIVTGWGRRSRVTGTSM 812


>AT2G35130.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:14807589-14810164 REVERSE
           LENGTH=591
          Length = 591

 Score =  145 bits (366), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 194/431 (45%), Gaps = 44/431 (10%)

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            PD   + +++ AY +     EA+     +L+  ++    ++ L+I  +C  G   RA  
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211

Query: 272 YFHKFSDMGLKPNLINFT---SMIEGLCKR-GSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
              +  +  + P  I  T   + IEGL KR G+ ++A ++ + M     KP   T+  +I
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           +   K   +  +++L+ ++ RS   KPN+ TYTA++N + R+    +AE +  +++E GL
Sbjct: 272 NLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            P+   Y  L++ + +AG    A ++ +LM   G  P+  +YN +VD   + G   +A  
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 390

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD------------ 495
           + ++    G+     ++ +L+S + K  D+ +  A+  +M+++G++PD            
Sbjct: 391 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 450

Query: 496 -----------------------IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
                                  I +Y  LI ++ +   +   E  F E     F P   
Sbjct: 451 RLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVV 510

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA----RGL 588
           T+TS I  Y R+      ++ F  M D GC PD      L+S    + ++++     R +
Sbjct: 511 TWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570

Query: 589 YDSMIEKGLIP 599
           +  +    L+P
Sbjct: 571 HKGVTVSSLVP 581



 Score =  133 bits (334), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 168/379 (44%), Gaps = 12/379 (3%)

Query: 236 KWLSVML-------DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINF 288
           KW S++L          F  D   F L+I  + +K     A   + +  +    P    +
Sbjct: 134 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTY 193

Query: 289 TSMIEGLCKRGSIKQAFEMLEEMVCQGWKP---NVYTHTALIDGLCK-KGWTEKAFRLFL 344
             +I+  C  G I++A  +L EM      P    V  + A I+GL K KG TE+A  +F 
Sbjct: 194 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQ 253

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
           ++ R +  KP   TY  MIN Y +  K   +  L   M+     PN  TYT L++   + 
Sbjct: 254 RMKR-DRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 312

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G  E+A ++   +  +G  P++  YNA+++   + G    A ++     H G E D+ +Y
Sbjct: 313 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 372

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           NI++  + +      A A+F +M + GI P + S+  L++ + + + +++ E   +E   
Sbjct: 373 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 432

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
            G  P      SM+  Y R G  T   K    M +  C  D   Y  LI+   K   L+ 
Sbjct: 433 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 492

Query: 585 ARGLYDSMIEKGLIPCEVT 603
              L+  + EK   P  VT
Sbjct: 493 IEELFVELKEKNFRPDVVT 511



 Score =  127 bits (318), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 181/387 (46%), Gaps = 5/387 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ ++ +  + KEA  +  ++     VP   T  L++K  C  GL++ A+ +  EM    
Sbjct: 161 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHH 220

Query: 211 VHPDSAS---YRVMVVAYCK-MGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
           V P +     Y   +    K  GN  EA      M          ++ L+I+ + +   +
Sbjct: 221 VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 280

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             + + + +      KPN+  +T+++    + G  ++A E+ E++   G +P+VY + AL
Sbjct: 281 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 340

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           ++   + G+   A  +F  L++    +P+  +Y  M++ Y R    + AE +   MK  G
Sbjct: 341 MESYSRAGYPYGAAEIF-SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 399

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           + P   ++  L+  + KA +  +   ++  MS  G  P+    N++++   + G+  +  
Sbjct: 400 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKME 459

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
           K+L +  +    AD  TYNILI+ + K   +++   LF ++ +   +PD+ ++T+ I  +
Sbjct: 460 KILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 519

Query: 507 CREKRMSESEMFFEEAVRFGFIPTKRT 533
            R+K   +    FEE +  G  P   T
Sbjct: 520 SRKKLYVKCLEVFEEMIDSGCAPDGGT 546



 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 6/283 (2%)

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAG 405
           ++R  + +P+V+ +  +I+ Y +  +   AE L  ++ E   +P  +TY  LI  +C AG
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204

Query: 406 NFERAFDLMNLMSREGFSP---NICTYNAIVDGLCK-KGRVQEAYKMLKDGFHNGLEADK 461
             ERA  ++  M     SP    +  YNA ++GL K KG  +EA  + +    +  +   
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
            TYN++I+ + K +    +  L+ +M     +P+I +YT L+  F RE    ++E  FE+
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324

Query: 522 AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
               G  P    Y +++  Y R G    A + F  M   GC PD  +Y  ++    +   
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384

Query: 582 LDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDC--CSAMV 622
             +A  +++ M   G+ P   + + L   Y K  D   C A+V
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 427



 Score = 97.1 bits (240), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 146/332 (43%), Gaps = 3/332 (0%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G  +EA+++   M      P T+T NL++ +  +      +  L+ EM +    P+  +Y
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             +V A+ + G   +A++    + + G   D   +  ++  +   G+   A   F     
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
           MG +P+  ++  M++   + G    A  + EEM   G  P + +H  L+    K     K
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422

Query: 339 AFRLFLKLVRSENN-KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
              +  ++  SEN  +P+     +M+N Y R  +  + E +L  M+      + +TY  L
Sbjct: 423 CEAIVKEM--SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           I+ + KAG  ER  +L   +  + F P++ T+ + +    +K    +  ++ ++   +G 
Sbjct: 481 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 540

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAK 489
             D  T  +L+S    +  ++Q  ++   M K
Sbjct: 541 APDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572



 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/315 (20%), Positives = 139/315 (44%), Gaps = 8/315 (2%)

Query: 146 EVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEE 205
           E    M+  + +  +   + ++  EM +    PN  T   ++      GL + A+ +FE+
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           +   G+ PD   Y  ++ +Y + G    A +  S+M   G   D AS+ +++  +   G 
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
            + A   F +   +G+ P + +   ++    K   + +   +++EM   G +P+ +   +
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 444

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKP---NVLTYTAMINGYCRDDKLNRAEMLLGRM 382
           +++   + G     F    K++    N P   ++ TY  +IN Y +   L R E L   +
Sbjct: 445 MLNLYGRLG----QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           KE+   P+  T+T+ I  + +   + +  ++   M   G +P+  T   ++     + +V
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 560

Query: 443 QEAYKMLKDGFHNGL 457
           ++   +L+   H G+
Sbjct: 561 EQVTSVLRT-MHKGV 574



 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 4/179 (2%)

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
           +  + D + +N+LI  + ++   K+A +L+ ++ +S   P   +Y  LI  +C    +  
Sbjct: 149 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 208

Query: 515 SEMFFEEAVRFGFIPTK---RTYTSMICGYC-REGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           +E+   E       P       Y + I G   R+GN   AI  F RM    C P +  Y 
Sbjct: 209 AEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN 268

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
            +I+   K SK   +  LY  M      P   T   L   + +   C  A  I ++L++
Sbjct: 269 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327


>AT1G77360.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:29071983-29073536 REVERSE
           LENGTH=517
          Length = 517

 Score =  145 bits (366), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/448 (22%), Positives = 209/448 (46%), Gaps = 12/448 (2%)

Query: 152 VRSFAEIGR-----LKEAVEMVFE--MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFE 204
           VR  A++ +     L  + ++V +  +   G+  + + +  V+      GL+ Y  + + 
Sbjct: 65  VRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWS 124

Query: 205 EMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKG 264
           E      H   A Y +M+ +  K+         ++ M  +  L +  +F +++ ++    
Sbjct: 125 EKQRHYEHSVRA-YHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQ 182

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHT 324
               A+  F+      L PNL+ F  ++  LCK  ++++A E+ E M    + P+  T++
Sbjct: 183 KVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYS 241

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKE 384
            L++G  K+    KA  +F +++ +    P+++TY+ M++  C+  +++ A  ++  M  
Sbjct: 242 ILLEGWGKEPNLPKAREVFREMIDA-GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDP 300

Query: 385 QGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQE 444
               P T  Y+ L+  +      E A D    M R G   ++  +N+++   CK  R++ 
Sbjct: 301 SICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKN 360

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
            Y++LK+    G+  +  + NI++    ++ +  +A  +F KM K   +PD  +YT +I 
Sbjct: 361 VYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIK 419

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
           +FC +K M  ++  ++   + G  P+  T++ +I G C E     A      M + G  P
Sbjct: 420 MFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSM 592
             + +G L   L K+ + D  + L + M
Sbjct: 480 SGVTFGRLRQLLIKEEREDVLKFLNEKM 507



 Score =  119 bits (297), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/446 (22%), Positives = 200/446 (44%), Gaps = 57/446 (12%)

Query: 61  VCDSFHQHTHMRVSPPRLHL--SIDPDSL-THEQAVTTVASLAGNAGSMVALSFFHWAIG 117
           V D     + + +S P+L L  ++D   L   ++ V  V +   NAG ++   FF W+  
Sbjct: 68  VADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAG-LLTYRFFQWSEK 126

Query: 118 YSRFRHFMRLY--IVCATSLIGNG-------NLQKAHEVMQ----CMV-RSFAEIGRLKE 163
              + H +R Y  ++ +T+ I          N  +  +++     C+V R +A   ++ E
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDE 186

Query: 164 AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
           A+     M    + PN    N ++   C+   V  AQ +FE M  R   PDS +Y +++ 
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLE 245

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL------------- 270
            + K  N+ +A +    M+D G   D  ++++++   C+ G    AL             
Sbjct: 246 GWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKP 305

Query: 271 ----------------------RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
                                   F +    G+K ++  F S+I   CK   +K  + +L
Sbjct: 306 TTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVL 365

Query: 309 EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR 368
           +EM  +G  PN  +   ++  L ++G  ++AF +F K+++    +P+  TYT +I  +C 
Sbjct: 366 KEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV--CEPDADTYTMVIKMFCE 423

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
             ++  A+ +   M+++G+ P+ +T++ LI+G C+    ++A  L+  M   G  P+  T
Sbjct: 424 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 483

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFH 454
           +  +   L K+ R ++  K L +  +
Sbjct: 484 FGRLRQLLIKEER-EDVLKFLNEKMN 508



 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 155/340 (45%), Gaps = 7/340 (2%)

Query: 338 KAFRLFLKLVRSENNKP--NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYT 395
           + ++L   L+ +   K   NV T+  ++  Y R  K++ A      M++  L PN   + 
Sbjct: 148 RQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFN 207

Query: 396 TLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN 455
            L+   CK+ N  +A ++   M R+ F+P+  TY+ +++G  K+  + +A ++ ++    
Sbjct: 208 GLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDA 266

Query: 456 GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES 515
           G   D VTY+I++   CK   + +AL +   M  S  +P    Y+ L+  +  E R+ E+
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326

Query: 516 EMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
              F E  R G       + S+I  +C+   +    +    M   G  P+S +   ++  
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386

Query: 576 LCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK---LW 632
           L ++ + DEA  ++  MI K   P   T   +   +C+  +  +A  +   + KK     
Sbjct: 387 LIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 445

Query: 633 IRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLA 672
           + T + L+  LC ER    A +   ++++M    + VT  
Sbjct: 446 MHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFG 485


>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
           chr1:28119237-28122314 REVERSE LENGTH=862
          Length = 862

 Score =  145 bits (366), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/574 (22%), Positives = 235/574 (40%), Gaps = 68/574 (11%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYL--FEEMS 207
            ++ ++   GR + ++E++  M N+ + P+  T N V+  AC  G +D+   L  F EM 
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVIN-ACARGGLDWEGLLGLFAEMR 239

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
             G+ PD  +Y  ++ A C +                                  +G   
Sbjct: 240 HEGIQPDIVTYNTLLSA-CAI----------------------------------RGLGD 264

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
            A   F   +D G+ P+L  ++ ++E   K   +++  ++L EM   G  P++ ++  L+
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           +   K G  ++A  +F ++ ++    PN  TY+ ++N + +  + +    L   MK    
Sbjct: 325 EAYAKSGSIKEAMGVFHQM-QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            P+  TY  LI+   + G F+    L + M  E   P++ TY  I+    K G  ++A K
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           +L+    N +      Y  +I    + A  ++AL  F+ M + G  P I ++ +L+  F 
Sbjct: 444 ILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 503

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
           R   + ESE      V  G    + T+ + I  Y + G    A+K +  M    C PD  
Sbjct: 504 RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDER 563

Query: 568 AYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC---------------------EVTRIT 606
               ++S       +DE R  ++ M    ++P                      E+    
Sbjct: 564 TLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623

Query: 607 LAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHV 666
           L+     I      M+  D  +   W +    ++ KL SE   G+   F++ LLD  + +
Sbjct: 624 LSNRVSNIHQVIGQMIKGDYDDDSNW-QIVEYVLDKLNSE-GCGLGIRFYNALLDALWWL 681

Query: 667 NRVTLAAFMTACYESNKYALVSDLSARIYKDNRL 700
            +   AA      E+ K  L  +L    ++ N+L
Sbjct: 682 GQKERAA--RVLNEATKRGLFPEL----FRKNKL 709



 Score =  139 bits (350), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 168/375 (44%)

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           +T++IS    +G   + L  F +    G+  ++ ++T++I    + G  + + E+L+ M 
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
            +   P++ T+  +I+   + G   +        +R E  +P+++TY  +++        
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLG 263

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
           + AEM+   M + G++P+  TY+ L++   K    E+  DL+  M+  G  P+I +YN +
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
           ++   K G ++EA  +       G   +  TY++L++   +         LF +M  S  
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383

Query: 493 QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIK 552
            PD  +Y  LI VF       E    F + V     P   TY  +I    + G    A K
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443

Query: 553 FFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYC 612
               M+ +  VP S AY  +I    + +  +EA   +++M E G  P   T  +L Y + 
Sbjct: 444 ILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 503

Query: 613 KIDDCCSAMVILDRL 627
           +      +  IL RL
Sbjct: 504 RGGLVKESEAILSRL 518



 Score =  123 bits (309), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/470 (21%), Positives = 196/470 (41%), Gaps = 5/470 (1%)

Query: 153 RSFAEIGRLKEAVEMVFEMHNQGMV-PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           + FA  G  + ++ +   M  Q    PN     +++ +    GL+D    +F+EM ++GV
Sbjct: 113 KEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGV 172

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL- 270
                SY  ++ AY + G    + + L  M +        ++  +I+     G     L 
Sbjct: 173 SRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLL 232

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F +    G++P+++ + +++     RG   +A  +   M   G  P++ T++ L++  
Sbjct: 233 GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF 292

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K    EK   L  ++  S  + P++ +Y  ++  Y +   +  A  +  +M+  G  PN
Sbjct: 293 GKLRRLEKVCDLLGEMA-SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPN 351

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
            NTY+ L++   ++G ++    L   M      P+  TYN +++   + G  +E   +  
Sbjct: 352 ANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFH 411

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           D     +E D  TY  +I    K    + A  +   M  + I P   +YT +I  F +  
Sbjct: 412 DMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAA 471

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
              E+ + F      G  P+  T+ S++  + R G +  +     R+ D G   +   + 
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFN 531

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT--RITLAYEYCKIDDCC 618
             I    +  K +EA   Y  M +    P E T   +   Y + ++ D C
Sbjct: 532 AQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDEC 581



 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 36/241 (14%)

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           PN + YT +I    + G  ++  ++ + M  +G S ++ +Y A+++   + GR + + ++
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQA-DIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           L    +  +    +TYN +I+   +   D +  L LF++M   GIQPDI +Y TL++   
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
                 E+EM F            RT                       M+D G VPD  
Sbjct: 259 IRGLGDEAEMVF------------RT-----------------------MNDGGIVPDLT 283

Query: 568 AYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
            Y  L+    K  +L++   L   M   G +P   +   L   Y K      AM +  ++
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343

Query: 628 E 628
           +
Sbjct: 344 Q 344



 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/319 (20%), Positives = 125/319 (39%), Gaps = 37/319 (11%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F E G  KE V +  +M  + + P+ +T   ++    + GL + A+ + + M+A  
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P S +Y  ++ A+ +     EA    + M + G      +F  ++  F   G    + 
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESE 512

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN---------VY 321
               +  D G+  N   F + IE   + G  ++A +   +M      P+         VY
Sbjct: 513 AILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVY 572

Query: 322 THTALIDGLCKKGWTE-KAFRLFLKLV----------RSE--------------NNKPNV 356
           +   L+D  C++ + E KA  +   ++          ++E              N   N+
Sbjct: 573 SFARLVDE-CREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNI 631

Query: 357 LTYTA-MING-YCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
                 MI G Y  D      E +L ++  +G       Y  L+D     G  ERA  ++
Sbjct: 632 HQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVL 691

Query: 415 NLMSREGFSPNICTYNAIV 433
           N  ++ G  P +   N +V
Sbjct: 692 NEATKRGLFPELFRKNKLV 710


>AT1G63630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:23587298-23588220 FORWARD
           LENGTH=257
          Length = 257

 Score =  145 bits (365), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 128/240 (53%)

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           K +V+  TA+++  C+D     A+ L   M E+G+ PN  TY  +ID  C +G +  A  
Sbjct: 7   KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           L+  M  +  +P+I T++A+++   K+ +V EA ++ K+     +    +TYN +I   C
Sbjct: 67  LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           KQ  +  A  +   MA  G  PD+ +++TLI  +C+ KR+      F E  R G +    
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           TYT++I G+C+ G+L  A    + M   G  PD I +  +++GLC + +L +A  + + +
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246



 Score =  135 bits (341), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 128/237 (54%), Gaps = 1/237 (0%)

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
           T I+   C+ G    A   F +  + G+ PN++ +  MI+  C  G    A ++L  M+ 
Sbjct: 14  TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
           +   P++ T +ALI+   K+    +A  ++ +++R  +  P  +TY +MI+G+C+ D+++
Sbjct: 74  KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRW-SIFPTTITYNSMIDGFCKQDRVD 132

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
            A+ +L  M  +G  P+  T++TLI+G+CKA   +   ++   M R G   N  TY  ++
Sbjct: 133 DAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192

Query: 434 DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            G C+ G +  A  +L +    G+  D +T++ +++  C + ++++A A+   + KS
Sbjct: 193 HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249



 Score =  129 bits (324), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 110/211 (52%)

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           M +     ++    AIVD LCK G    A  +  +    G+  + +TYN +I   C    
Sbjct: 1   MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
              A  L   M +  I PDI +++ LI  F +E+++SE+E  ++E +R+   PT  TY S
Sbjct: 61  WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           MI G+C++  +  A +    M+  GC PD + + TLI+G CK  ++D    ++  M  +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180

Query: 597 LIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
           ++   VT  TL + +C++ D  +A  +L+ +
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211



 Score =  127 bits (320), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 120/235 (51%)

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
           T ++D  CK GN   A +L   M  +G  PN+ TYN ++D  C  GR  +A ++L+    
Sbjct: 14  TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
             +  D VT++ LI+   K+  + +A  ++ +M +  I P   +Y ++I  FC++ R+ +
Sbjct: 74  KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
           ++   +     G  P   T++++I GYC+   +   ++ F  M   G V +++ Y TLI 
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193

Query: 575 GLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
           G C+   LD A+ L + MI  G+ P  +T   +    C   +   A  IL+ L+K
Sbjct: 194 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248



 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 102/204 (50%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
            CM+ SF   GR  +A +++  M  + + P+  T + ++    +   V  A+ +++EM  
Sbjct: 49  NCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR 108

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
             + P + +Y  M+  +CK   V +A + L  M  +G   D  +F+ +I+ +C+      
Sbjct: 109 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 168

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
            +  F +    G+  N + +T++I G C+ G +  A ++L EM+  G  P+  T   ++ 
Sbjct: 169 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 228

Query: 329 GLCKKGWTEKAFRLFLKLVRSENN 352
           GLC K    KAF +   L +SE++
Sbjct: 229 GLCSKKELRKAFAILEDLQKSEDH 252



 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 114/249 (45%), Gaps = 1/249 (0%)

Query: 136 IGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGL 195
           +G  +++    +   +V    + G    A  +  EMH +G+ PN  T N ++   C  G 
Sbjct: 1   MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
              A  L   M  + ++PD  ++  ++ A+ K   V EA++    ML         ++  
Sbjct: 61  WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           +I  FC++     A R     +  G  P+++ F+++I G CK   +    E+  EM  +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
              N  T+T LI G C+ G  + A  L  +++ S    P+ +T+  M+ G C   +L +A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI-SCGVAPDYITFHCMLAGLCSKKELRKA 239

Query: 376 EMLLGRMKE 384
             +L  +++
Sbjct: 240 FAILEDLQK 248



 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 7/241 (2%)

Query: 457 LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE 516
           ++AD V    ++   CK  +   A  LF++M + GI P++ +Y  +I  FC   R S+++
Sbjct: 6   IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65

Query: 517 MFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
                 +     P   T++++I  + +E  ++ A + +  M      P +I Y ++I G 
Sbjct: 66  QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125

Query: 577 CKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR-- 634
           CKQ ++D+A+ + DSM  KG  P  VT  TL   YCK     + M I   + ++  +   
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185

Query: 635 -TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVT----LAAFMTACYESNKYALVSD 689
            T TTL+   C    +  A    ++++      + +T    LA   +       +A++ D
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245

Query: 690 L 690
           L
Sbjct: 246 L 246



 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 9/209 (4%)

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           M +S I+ D+   T ++   C++     ++  F E    G  P   TY  MI  +C  G 
Sbjct: 1   MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60

Query: 547 LTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRIT 606
            + A +    M +    PD + +  LI+   K+ K+ EA  +Y  M+   + P  +T  +
Sbjct: 61  WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120

Query: 607 LAYEYCKIDDCCSAMVILDRLEKKLW---IRTATTLVRKLCSERKVGMAALFFHKLLDMD 663
           +   +CK D    A  +LD +  K     + T +TL+   C  ++V      F ++    
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180

Query: 664 FHVNRVTLAAFMTACYESNKYALVSDLSA 692
              N VT    +      + +  V DL A
Sbjct: 181 IVANTVTYTTLI------HGFCQVGDLDA 203


>AT5G40400.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:16166444-16168276 FORWARD
           LENGTH=610
          Length = 610

 Score =  145 bits (365), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 169/354 (47%), Gaps = 30/354 (8%)

Query: 266 ATRALRYFH--KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV----------- 312
           A+RA+ +F   KF D+G +PN+ N+  ++  L        A + L E++           
Sbjct: 93  ASRAITFFKWVKF-DLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDV 151

Query: 313 ----------CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM 362
                     C  W P V+    L+ G  K G  E+ FR+F +++ S     +V+T   +
Sbjct: 152 FRVLVSATDEC-NWDPVVFD--MLVKGYLKLGLVEEGFRVFREVLDS-GFSVSVVTCNHL 207

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGF 422
           +NG  + D +     +   M   G+ PNT T+  L +  C   NF    D +  M  EGF
Sbjct: 208 LNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGF 267

Query: 423 SPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALA 482
            P++ TYN +V   C++GR++EA+ + K  +   +  D VTY  LI   CK   +++A  
Sbjct: 268 EPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQ 327

Query: 483 LFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYC 542
            F +M   GI+PD  SY TLI  +C+E  M +S+    E +    +P + T   ++ G+ 
Sbjct: 328 TFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFV 387

Query: 543 REGNLTMAIKFFHRMSDHGC-VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
           REG L  A+ F   +      +P  +    LI  LC++ K   A+ L D +IE+
Sbjct: 388 REGRLLSAVNFVVELRRLKVDIPFEVC-DFLIVSLCQEGKPFAAKHLLDRIIEE 440



 Score =  139 bits (350), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/465 (22%), Positives = 203/465 (43%), Gaps = 41/465 (8%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   +V+ + ++G ++E   +  E+ + G   +  T N ++    ++ L++    ++  M
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
              G+HP++ ++ ++   +C   N  E D +L                            
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFL---------------------------- 259

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
                   K  + G +P+L+ + +++   C+RG +K+AF + + M  +   P++ T+T+L
Sbjct: 260 -------EKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSL 312

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           I GLCK G   +A + F ++V     KP+ ++Y  +I  YC++  + +++ LL  M    
Sbjct: 313 IKGLCKDGRVREAHQTFHRMV-DRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS 371

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           ++P+  T   +++G  + G    A + +  + R          + ++  LC++G+   A 
Sbjct: 372 VVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAK 431

Query: 447 KMLKDGFHN-GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            +L       G EA   TYN LI    +   I++AL L  K+       D  +Y  LI  
Sbjct: 432 HLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGC 491

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
            CR  R  E+E    E       P      +++ GYC+E +   A +     +    + D
Sbjct: 492 LCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFD 551

Query: 566 SIAYGTLISGLCKQS-KLDEARGLYDSMIEKGLIPCEVTRITLAY 609
             +Y +L+  +C+      +A  L + M   G +P    R+T  Y
Sbjct: 552 PESYNSLVKAVCETGCGYKKALELQERMQRLGFVP---NRLTCKY 593



 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 174/403 (43%), Gaps = 11/403 (2%)

Query: 249 DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           D   F +++  + + G      R F +  D G   +++    ++ GL K   ++  +++ 
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224

Query: 309 EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL---FLKLVRSENNKPNVLTYTAMING 365
             M   G  PN YT   L +  C     +  FR    FL+ +  E  +P+++TY  +++ 
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFC----NDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSS 280

Query: 366 YCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPN 425
           YCR  +L  A  L   M  + ++P+  TYT+LI G CK G    A    + M   G  P+
Sbjct: 281 YCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD 340

Query: 426 ICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFS 485
             +YN ++   CK+G +Q++ K+L +   N +  D+ T  +++    ++  +  A+    
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVV 400

Query: 486 KMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV-RFGFIPTKRTYTSMICGYCRE 544
           ++ +  +         LI   C+E +   ++   +  +   G      TY ++I    R 
Sbjct: 401 ELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRC 460

Query: 545 GNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTR 604
             +  A+    ++ +   V D+  Y  LI  LC+  +  EA  L   M +  + P     
Sbjct: 461 DAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFIC 520

Query: 605 ITLAYEYCKIDDCCSAMVILDRLEKKLWI---RTATTLVRKLC 644
             L Y YCK  D   A  +L     +  I    +  +LV+ +C
Sbjct: 521 GALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVC 563



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 1/151 (0%)

Query: 146 EVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEE 205
           E    ++ S +    ++EA+ +  ++ NQ  V + +T   ++   C +G    A+ L  E
Sbjct: 448 ETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAE 507

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           M    V PDS     +V  YCK  +  +A++ LS+      + D  S+  ++   CE G 
Sbjct: 508 MFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGC 567

Query: 266 A-TRALRYFHKFSDMGLKPNLINFTSMIEGL 295
              +AL    +   +G  PN +    +I+ L
Sbjct: 568 GYKKALELQERMQRLGFVPNRLTCKYLIQVL 598


>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
           chr1:19312078-19314145 REVERSE LENGTH=650
          Length = 650

 Score =  144 bits (364), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 177/378 (46%), Gaps = 18/378 (4%)

Query: 202 LFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFC 261
           +FE+M  R    D  +Y +M+    ++G   EA    + M+  G  ++   +  ++    
Sbjct: 257 VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLA 316

Query: 262 EKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ---AFEMLEEMVCQGWKP 318
           +     +A++ F +  + G +PN   ++ ++  L   G + +     E+ +  + QG   
Sbjct: 317 KGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG--- 373

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKL----VRSENNKPNVLTYTAMINGYCRDDKLNR 374
            +Y++  L+  L K G   +A RLF  +    V+ E +     +Y +M+   C   K   
Sbjct: 374 -IYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERD-----SYMSMLESLCGAGKTIE 425

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVD 434
           A  +L ++ E+G++ +T  Y T+     K        DL   M ++G SP+I TYN ++ 
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485

Query: 435 GLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP 494
              + G V EA  + ++   +  + D ++YN LI+   K  D+ +A   F +M + G+ P
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNP 545

Query: 495 DIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFF 554
           D+ +Y+TL+  F + +R+  +   FEE +  G  P   TY  ++    + G    A+  +
Sbjct: 546 DVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLY 605

Query: 555 HRMSDHGCVPDSIAYGTL 572
            +M   G  PDSI Y  L
Sbjct: 606 SKMKQQGLTPDSITYTVL 623



 Score =  130 bits (326), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 169/359 (47%), Gaps = 4/359 (1%)

Query: 249 DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           D  ++T++I      G    A+  F++    GL  N++ + ++++ L K   + +A ++ 
Sbjct: 269 DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328

Query: 309 EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR 368
             MV  G +PN YT++ L++ L  +G   +  RL   +V           Y+ ++    +
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVAEG---QLVRLD-GVVEISKRYMTQGIYSYLVRTLSK 384

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
              ++ A  L   M    +    ++Y ++++  C AG    A ++++ +  +G   +   
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           YN +   L K  ++   + + +    +G   D  TYNILI+   +  ++ +A+ +F ++ 
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
           +S  +PDI SY +LI    +   + E+ + F+E    G  P   TY++++  + +   + 
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           MA   F  M   GC P+ + Y  L+  L K  +  EA  LY  M ++GL P  +T   L
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623



 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 166/369 (44%), Gaps = 12/369 (3%)

Query: 312 VCQGW--KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRD 369
           + + W  K N +T+  L+    +     KAF ++ + +R   +K ++  Y  +++   +D
Sbjct: 193 LVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCE-IRRGGHKLDIFAYNMLLDALAKD 251

Query: 370 DKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTY 429
           +K   A  +   MK++    +  TYT +I    + G  + A  L N M  EG + N+  Y
Sbjct: 252 EK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGY 308

Query: 430 NAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAK 489
           N ++  L K   V +A ++       G   ++ TY++L++    +  + + L    +++K
Sbjct: 309 NTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVR-LDGVVEISK 367

Query: 490 SGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTM 549
             +   I+SY  L+    +   +SE+   F +   F     + +Y SM+   C  G    
Sbjct: 368 RYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIE 425

Query: 550 AIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAY 609
           AI+   ++ + G V D++ Y T+ S L K  ++     L++ M + G  P   T   L  
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485

Query: 610 EYCKIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHV 666
            + ++ +   A+ I + LE+   K  I +  +L+  L     V  A + F ++ +   + 
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNP 545

Query: 667 NRVTLAAFM 675
           + VT +  M
Sbjct: 546 DVVTYSTLM 554


>AT1G07740.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:2399117-2400496 REVERSE
           LENGTH=459
          Length = 459

 Score =  144 bits (364), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 169/379 (44%), Gaps = 1/379 (0%)

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
           A  LF +    G   D  SY  ++    K  N    D+ L ++  R      + F  +I 
Sbjct: 65  ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQ 124

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
            + + G   +A+  FHK +       + +  ++I  L   G +++A    +       +P
Sbjct: 125 HYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRP 184

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
           N  +   LI G   K   E A ++F +++  E  +P+V+TY ++I   CR+D + +A+ L
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEV-QPSVVTYNSLIGFLCRNDDMGKAKSL 243

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
           L  M ++ + PN  T+  L+ G C  G +  A  LM  M   G  P +  Y  ++  L K
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
           +GR+ EA  +L +     ++ D V YNIL++  C +  + +A  + ++M   G +P+  +
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAAT 363

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS 558
           Y  +I  FCR +            +     PT  T+  M+ G  + GNL  A      M 
Sbjct: 364 YRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMG 423

Query: 559 DHGCVPDSIAYGTLISGLC 577
                  S A+  L+S LC
Sbjct: 424 KKNLSFGSGAWQNLLSDLC 442



 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/428 (21%), Positives = 185/428 (43%), Gaps = 26/428 (6%)

Query: 66  HQHTHMRVSPPRLHLSIDPDSLTHE------QAVTTVASLAGNAGSMVALSFFHWAIGYS 119
           H HT     P +   S +P   TH+      + V  +  L        ALS FH      
Sbjct: 20  HYHTSRPEKPTKKASSHEP---THKFTRKPWEEVPFLTDLKEIEDPEEALSLFHQYQEMG 76

Query: 120 RFRHFMRLYIVCATSLIGNGNLQKAHEVMQC---------------MVRSFAEIGRLKEA 164
            FRH    Y      L  + N     ++++                +++ + + G + +A
Sbjct: 77  -FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKA 135

Query: 165 VEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVA 224
           +++  ++ +   V   Q+LN ++ +  + G ++ A+  F+      + P+S S+ +++  
Sbjct: 136 IDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKG 195

Query: 225 YCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPN 284
           +    +   A K    ML+        ++  +I   C      +A           ++PN
Sbjct: 196 FLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPN 255

Query: 285 LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 344
            + F  +++GLC +G   +A +++ +M  +G KP +  +  L+  L K+G  ++A +L L
Sbjct: 256 AVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA-KLLL 314

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
             ++    KP+V+ Y  ++N  C + ++  A  +L  M+ +G  PN  TY  +IDG C+ 
Sbjct: 315 GEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRI 374

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
            +F+   +++N M      P   T+  +V GL K G +  A  +L+      L      +
Sbjct: 375 EDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAW 434

Query: 465 NILISEHC 472
             L+S+ C
Sbjct: 435 QNLLSDLC 442



 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 165/366 (45%), Gaps = 9/366 (2%)

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           AL  FH++ +MG + +  +++S+I  L K     + F+ +++++      NV    +L  
Sbjct: 65  ALSLFHQYQEMGFRHDYPSYSSLIYKLAK----SRNFDAVDQILRLVRYRNVRCRESLFM 120

Query: 329 GLC----KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKE 384
           GL     K G  +KA  +F K+  S +    + +   +IN    + +L +A+      K+
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKIT-SFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD 179

Query: 385 QGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQE 444
             L PN+ ++  LI G     ++E A  + + M      P++ TYN+++  LC+   + +
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK 239

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
           A  +L+D     +  + VT+ +L+   C + +  +A  L   M   G +P + +Y  L++
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
              +  R+ E+++   E  +    P    Y  ++   C E  +  A +    M   GC P
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVIL 624
           ++  Y  +I G C+    D    + ++M+     P   T + +     K  +   A  +L
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL 419

Query: 625 DRLEKK 630
           + + KK
Sbjct: 420 EVMGKK 425



 Score =  110 bits (275), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 154/340 (45%), Gaps = 23/340 (6%)

Query: 101 GNAGSM-VALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIG 159
           G AGS+  A+  FH    +   R    L  +    L+ NG L+KA        +SF +  
Sbjct: 127 GKAGSVDKAIDVFHKITSFDCVRTIQSLNTL-INVLVDNGELEKA--------KSFFDGA 177

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           +            +  + PN+ + N+++K   +    + A  +F+EM    V P   +Y 
Sbjct: 178 K------------DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYN 225

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            ++   C+  ++ +A   L  M+ +    +  +F L++   C KG    A +        
Sbjct: 226 SLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYR 285

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G KP L+N+  ++  L KRG I +A  +L EM  +  KP+V  +  L++ LC +    +A
Sbjct: 286 GCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEA 345

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           +R+  ++ + +  KPN  TY  MI+G+CR +  +    +L  M      P   T+  ++ 
Sbjct: 346 YRVLTEM-QMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVA 404

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
           G  K GN + A  ++ +M ++  S     +  ++  LC K
Sbjct: 405 GLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIK 444



 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 5/206 (2%)

Query: 476 DIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT-Y 534
           D ++AL+LF +  + G + D  SY++LI    + +     +      VR+  +  + + +
Sbjct: 61  DPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQIL-RLVRYRNVRCRESLF 119

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
             +I  Y + G++  AI  FH+++   CV    +  TLI+ L    +L++A+  +D   +
Sbjct: 120 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD 179

Query: 595 KGLIPCEVTRITLAYEY---CKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGM 651
             L P  V+   L   +   C  +  C     +  +E +  + T  +L+  LC    +G 
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK 239

Query: 652 AALFFHKLLDMDFHVNRVTLAAFMTA 677
           A      ++      N VT    M  
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKG 265


>AT5G39980.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:16001036-16003072 REVERSE
           LENGTH=678
          Length = 678

 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 201/460 (43%), Gaps = 39/460 (8%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
           P+    N+V++        D A  LF+EM  R + PD  +Y  ++ ++ K G    A  W
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212

Query: 238 LSVM-LDR--GFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
           L  M  DR  G LV  ++   +    C+    ++A+  F +    G+ P+L+ + SMI  
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCD---YSKAISIFSRLKRSGITPDLVAYNSMINV 269

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
             K    ++A  +++EM   G  PN  +++ L+    +     +A  +F ++ +  N   
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM-KEVNCAL 328

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           ++ T   MI+ Y + D +  A+ L   +++  + PN  +Y T++  + +A  F  A  L 
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
            LM R+    N+ TYN ++    K    ++A  ++++    G+E + +TY+ +IS   K 
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448

Query: 475 ADIKQALALFSKMAKSGIQ-------------------------------PDIHSYTTLI 503
             + +A  LF K+  SG++                               PD     T I
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 508

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
            +  +  R  E+   F +A   G +     +  MI  Y R       I+ F +M   G  
Sbjct: 509 TILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYF 568

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG-LIPCEV 602
           PDS     +++   KQ + ++A  +Y  M E+G + P EV
Sbjct: 569 PDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEV 608



 Score =  115 bits (289), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/436 (20%), Positives = 195/436 (44%), Gaps = 5/436 (1%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           +A+ +   +   G+ P+    N ++ +  +  L   A+ L +EM+  GV P++ SY  ++
Sbjct: 243 KAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302

Query: 223 VAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK 282
             Y +    LEA    + M +    +D  +  ++I  + +      A R F     M ++
Sbjct: 303 SVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIE 362

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           PN++++ +++    +     +A  +   M  +  + NV T+  +I    K    EKA  L
Sbjct: 363 PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNL 422

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
            ++ ++S   +PN +TY+ +I+ + +  KL+RA  L  +++  G+  +   Y T+I  + 
Sbjct: 423 -VQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYE 481

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           + G    A  L++ +       NI    AI   L K GR +EA  + +  F +G   D  
Sbjct: 482 RVGLMGHAKRLLHELK---LPDNIPRETAIT-ILAKAGRTEEATWVFRQAFESGEVKDIS 537

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
            +  +I+ + +       + +F KM  +G  PD +    ++  + +++   +++  + E 
Sbjct: 538 VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 597

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
              G +     +  M+  Y  + +  M    F R+     V     +  + +   +  KL
Sbjct: 598 QEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKL 657

Query: 583 DEARGLYDSMIEKGLI 598
           ++A  + + M E+G++
Sbjct: 658 NDASRVMNRMRERGIL 673



 Score =  110 bits (274), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 152/339 (44%), Gaps = 7/339 (2%)

Query: 273 FHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID---G 329
           F +     L P+   ++++I    K G    A   L++M       ++  ++ LI+    
Sbjct: 178 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 237

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
           LC      KA  +F +L RS    P+++ Y +MIN Y +      A +L+  M E G++P
Sbjct: 238 LCDYS---KAISIFSRLKRS-GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 293

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           NT +Y+TL+  + +   F  A  +   M     + ++ T N ++D   +   V+EA ++ 
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
                  +E + V+YN ++  + +     +A+ LF  M +  I+ ++ +Y T+I ++ + 
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
               ++    +E    G  P   TY+++I  + + G L  A   F ++   G   D + Y
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
            T+I    +   +  A+ L   +     IP E     LA
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILA 512



 Score =  106 bits (264), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 148/332 (44%), Gaps = 1/332 (0%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P++  +  ++  + +      A  + +EM  +   P+ YT++ LI    K+G  + A   
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS- 211

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
           +L+ +  +    +++ Y+ +I    R    ++A  +  R+K  G+ P+   Y ++I+ + 
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           KA  F  A  L+  M+  G  PN  +Y+ ++    +  +  EA  +  +        D  
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 331

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           T NI+I  + +   +K+A  LF  + K  I+P++ SY T++ V+   +   E+   F   
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
            R        TY +MI  Y +      A      M   G  P++I Y T+IS   K  KL
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKI 614
           D A  L+  +   G+   +V   T+   Y ++
Sbjct: 452 DRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 483



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 128/279 (45%), Gaps = 1/279 (0%)

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG-LIPNTNTYTTLIDGHCKAGNFERAF 411
           K   L+   M++   R++   R+  LL  + E+    P+   Y  ++    +A  F+ A 
Sbjct: 116 KDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAH 175

Query: 412 DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEH 471
            L + M +   +P+  TY+ ++    K+G    A   L+    + +  D V Y+ LI   
Sbjct: 176 GLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELS 235

Query: 472 CKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTK 531
            +  D  +A+++FS++ +SGI PD+ +Y ++I V+ + K   E+ +  +E    G +P  
Sbjct: 236 RRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNT 295

Query: 532 RTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
            +Y++++  Y        A+  F  M +  C  D      +I    +   + EA  L+ S
Sbjct: 296 VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS 355

Query: 592 MIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           + +  + P  V+  T+   Y + +    A+ +   +++K
Sbjct: 356 LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK 394



 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 5/272 (1%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
            M+  + ++  +KEA  + + +    + PN  + N ++++  E  L   A +LF  M  +
Sbjct: 335 IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK 394

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
            +  +  +Y  M+  Y K     +A   +  M  RG   +  +++ IIS + + G   RA
Sbjct: 395 DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
              F K    G++ + + + +MI    + G +  A  +L E+      P+       I  
Sbjct: 455 ATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL----PDNIPRETAITI 510

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
           L K G TE+A  +F +   S   K ++  +  MIN Y R+ +      +  +M+  G  P
Sbjct: 511 LAKAGRTEEATWVFRQAFESGEVK-DISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFP 569

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
           ++N    +++ + K   FE+A  +   M  EG
Sbjct: 570 DSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601


>AT2G36240.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr2:15195663-15197156 FORWARD LENGTH=497
          Length = 497

 Score =  143 bits (360), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 158/319 (49%), Gaps = 14/319 (4%)

Query: 288 FTSMIEGLCKRGSIKQA---FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 344
           F S I+  C+   +  A   F+ ++ ++    KPNV  +  +++G  K G  +KA R + 
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLI--DGKPNVGVYNTVVNGYVKSGDMDKALRFYQ 217

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
           ++ + E  KP+V T+  +INGYCR  K + A  L   MKE+G  PN  ++ TLI G   +
Sbjct: 218 RMGK-ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276

Query: 405 GNFER----AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEAD 460
           G  E     A++++ L  R  FS   C    +VDGLC++GRV +A  ++ D  +  +   
Sbjct: 277 GKIEEGVKMAYEMIELGCR--FSEATC--EILVDGLCREGRVDDACGLVLDLLNKRVLPS 332

Query: 461 KVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFE 520
           +  Y  L+ + C +    +A+ +  ++ K G  P   + TTL+    +  R  ++  F E
Sbjct: 333 EFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFME 392

Query: 521 EAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQS 580
           + +  G +P   T+  ++   C   + T A +     S  G  PD   Y  L+SG  K+ 
Sbjct: 393 KMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEG 452

Query: 581 KLDEARGLYDSMIEKGLIP 599
           +  E   L + M++K ++P
Sbjct: 453 RRKEGEVLVNEMLDKDMLP 471



 Score =  134 bits (337), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 197/458 (43%), Gaps = 51/458 (11%)

Query: 75  PPRLHLSIDP----------DSLTHEQAVTTVASLAGNAGSMVA---------LSFFHWA 115
           PP L LS  P          ++L H Q +T   +L G   S +           + F+WA
Sbjct: 45  PPTLTLSPSPKHSNFVNFLENNLPHHQTLTP-QTLLGFLRSKIRNHPLYAHYDFAVFNWA 103

Query: 116 IGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMV-FEMHN- 173
                FRH                     H+    M RS A   R  +   ++ F   N 
Sbjct: 104 ATLDTFRH--------------------DHDSFLWMSRSLAATHRFDDLYRLLSFVAANP 143

Query: 174 ---QGMVPNTQTLNLVMKIA----CEMGLVDYAQYLFEEMSAR-GVHPDSASYRVMVVAY 225
                 + +   L  + + A    C    +DYA   F+ M       P+   Y  +V  Y
Sbjct: 144 CPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGY 203

Query: 226 CKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNL 285
            K G++ +A ++   M       D  +F ++I+ +C       AL  F +  + G +PN+
Sbjct: 204 VKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNV 263

Query: 286 INFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK 345
           ++F ++I G    G I++  +M  EM+  G + +  T   L+DGLC++G  + A  L L 
Sbjct: 264 VSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLD 323

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAG 405
           L+ ++   P+   Y +++   C ++K  RA  ++  + ++G  P     TTL++G  K+G
Sbjct: 324 LL-NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSG 382

Query: 406 NFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYN 465
             E+A   M  M   G  P+  T+N ++  LC      +A ++       G E D+ TY+
Sbjct: 383 RTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYH 442

Query: 466 ILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
           +L+S   K+   K+   L ++M    + PDI +Y  L+
Sbjct: 443 VLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480



 Score =  130 bits (328), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 16/349 (4%)

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHT 324
           + +R+L   H+F D+     L++F +     C  G             C   +P      
Sbjct: 118 WMSRSLAATHRFDDLY---RLLSFVAANPCPCSSGIFS----------CPELEP---IFR 161

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKE 384
           + ID  C+    + A   F  + R  + KPNV  Y  ++NGY +   +++A     RM +
Sbjct: 162 SAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGK 221

Query: 385 QGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQE 444
           +   P+  T+  LI+G+C++  F+ A DL   M  +G  PN+ ++N ++ G    G+++E
Sbjct: 222 ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEE 281

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
             KM  +    G    + T  IL+   C++  +  A  L   +    + P    Y +L+ 
Sbjct: 282 GVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVE 341

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
             C E +   +    EE  + G  P     T+++ G  + G    A  F  +M + G +P
Sbjct: 342 KLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILP 401

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
           DS+ +  L+  LC      +A  L      KG  P E T   L   + K
Sbjct: 402 DSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTK 450



 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 157/334 (47%), Gaps = 6/334 (1%)

Query: 218 YRVMVVAYC---KMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH 274
           +R  + AYC   KM   L A   +  ++D    V    +  +++ + + G   +ALR++ 
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNV--GVYNTVVNGYVKSGDMDKALRFYQ 217

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           +      KP++  F  +I G C+      A ++  EM  +G +PNV +   LI G    G
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
             E+  ++  +++     + +  T   +++G CR+ +++ A  L+  +  + ++P+   Y
Sbjct: 278 KIEEGVKMAYEMIEL-GCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
            +L++  C      RA ++M  + ++G +P       +V+GL K GR ++A   ++   +
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
            G+  D VT+N+L+ + C       A  L    +  G +PD  +Y  L++ F +E R  E
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
            E+   E +    +P   TY  ++ G    G  +
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490



 Score =  115 bits (289), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 1/295 (0%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   +V  + + G + +A+     M  +   P+  T N+++   C     D A  LF EM
Sbjct: 195 VYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREM 254

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
             +G  P+  S+  ++  +   G + E  K    M++ G     A+  +++   C +G  
Sbjct: 255 KEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRV 314

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             A        +  + P+  ++ S++E LC      +A EM+EE+  +G  P     T L
Sbjct: 315 DDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTL 374

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           ++GL K G TEKA     K++ +    P+ +T+  ++   C  D    A  L      +G
Sbjct: 375 VEGLRKSGRTEKASGFMEKMMNA-GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
             P+  TY  L+ G  K G  +    L+N M  +   P+I TYN ++DGL   G+
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488



 Score =  115 bits (289), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 150/333 (45%), Gaps = 8/333 (2%)

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLI---PNTNTYTTLIDGHCKAGNFERAFDLMN 415
           + + I+ YCR  K++ A +    MK   LI   PN   Y T+++G+ K+G+ ++A     
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKR--LIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQ 217

Query: 416 LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQA 475
            M +E   P++CT+N +++G C+  +   A  + ++    G E + V++N LI       
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277

Query: 476 DIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYT 535
            I++ + +  +M + G +    +   L+   CRE R+ ++     + +    +P++  Y 
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337

Query: 536 SMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
           S++   C E     A++    +   G  P  IA  TL+ GL K  + ++A G  + M+  
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397

Query: 596 GLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT---LVRKLCSERKVGMA 652
           G++P  VT   L  + C  D    A  +      K +    TT   LV     E +    
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457

Query: 653 ALFFHKLLDMDFHVNRVTLAAFMTACYESNKYA 685
            +  +++LD D   +  T    M     + K++
Sbjct: 458 EVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490



 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 123/259 (47%), Gaps = 1/259 (0%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  +    +   A+++  EM  +G  PN  + N +++     G ++    +  EM   G
Sbjct: 234 LINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG 293

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
                A+  ++V   C+ G V +A   +  +L++  L     +  ++ + C +  A RA+
Sbjct: 294 CRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAM 353

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +    G  P  I  T+++EGL K G  ++A   +E+M+  G  P+  T   L+  L
Sbjct: 354 EMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDL 413

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           C    +  A RL L L  S+  +P+  TY  +++G+ ++ +    E+L+  M ++ ++P+
Sbjct: 414 CSSDHSTDANRLRL-LASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPD 472

Query: 391 TNTYTTLIDGHCKAGNFER 409
             TY  L+DG    G F R
Sbjct: 473 IFTYNRLMDGLSCTGKFSR 491



 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 26/281 (9%)

Query: 412 DLMNLMSREGFSPNICT------------YNAIVDGLCKKGRVQEAY------KMLKDGF 453
           DL  L+S    +P  C+            + + +D  C+  ++  A       K L DG 
Sbjct: 131 DLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG- 189

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
               + +   YN +++ + K  D+ +AL  + +M K   +PD+ ++  LI  +CR  +  
Sbjct: 190 ----KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFD 245

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
            +   F E    G  P   ++ ++I G+   G +   +K  + M + GC         L+
Sbjct: 246 LALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILV 305

Query: 574 SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWI 633
            GLC++ ++D+A GL   ++ K ++P E    +L  + C  +    AM +++ L KK   
Sbjct: 306 DGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQT 365

Query: 634 R---TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTL 671
                 TTLV  L    +   A+ F  K+++     + VT 
Sbjct: 366 PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTF 406



 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 1/196 (0%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
           + +V      GR+ +A  +V ++ N+ ++P+      +++  C       A  + EE+  
Sbjct: 302 EILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWK 361

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
           +G  P   +   +V    K G   +A  ++  M++ G L D+ +F L++ + C    +T 
Sbjct: 362 KGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTD 421

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A R     S  G +P+   +  ++ G  K G  K+   ++ EM+ +   P+++T+  L+D
Sbjct: 422 ANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMD 481

Query: 329 GL-CKKGWTEKAFRLF 343
           GL C   ++ K  R+ 
Sbjct: 482 GLSCTGKFSRKQVRML 497


>AT5G18950.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:6328519-6329970 REVERSE
           LENGTH=483
          Length = 483

 Score =  141 bits (355), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 159/336 (47%), Gaps = 5/336 (1%)

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
           G A +A + F      G KP        ++ L + G +++A E+   +   G   +V T 
Sbjct: 126 GKAVKAAKSF--LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTC 183

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
            +++ G  K    ++ + L  ++V SE +   +     +I   C    ++    LL +  
Sbjct: 184 NSVLLGCLKARKLDRFWELHKEMVESEFDSERI---RCLIRALCDGGDVSEGYELLKQGL 240

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
           +QGL P    Y  LI G C+ GN+    ++++ M      P++  Y  I+ GLC   +  
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQL 300

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
           EAY + K+    G   D+V Y  +I   C++  +  A  L+ +M K G++P+  +Y  +I
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
               +   +S  E F+ E +R G+  T  +  +MI G+C  G    A + F  MS+ G  
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           P++I Y  LI G CK++K+++   LY  +   GL P
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKELKALGLKP 456



 Score =  122 bits (307), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 1/248 (0%)

Query: 291 MIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 350
           +I  LC  G + + +E+L++ + QG  P  Y +  LI G C+ G         L  + + 
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIG-NYACMSEVLHTMIAW 277

Query: 351 NNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA 410
           N+ P++  Y  +I G C + K   A  +   +K++G  P+   YTT+I G C+ G    A
Sbjct: 278 NHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSA 337

Query: 411 FDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISE 470
             L   M ++G  PN   YN ++ G  K+G +        +   NG     ++ N +I  
Sbjct: 338 RKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397

Query: 471 HCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPT 530
            C      +A  +F  M+++G+ P+  +Y  LI  FC+E ++ +    ++E    G  P+
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPS 457

Query: 531 KRTYTSMI 538
              Y +++
Sbjct: 458 GMAYAALV 465



 Score =  120 bits (300), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 151/348 (43%), Gaps = 5/348 (1%)

Query: 229 GNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINF 288
           G  ++A K  S +   GF  +       +    E+G    A+  ++   DMG+  +++  
Sbjct: 126 GKAVKAAK--SFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTC 183

Query: 289 TSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVR 348
            S++ G  K   + + +E+ +EMV   +         LI  LC  G   + + L LK   
Sbjct: 184 NSVLLGCLKARKLDRFWELHKEMVESEFDSE--RIRCLIRALCDGGDVSEGYEL-LKQGL 240

Query: 349 SENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFE 408
            +   P    Y  +I+G+C          +L  M      P+   Y  +I G C      
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQL 300

Query: 409 RAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILI 468
            A+ +   +  +G++P+   Y  ++ G C+KG +  A K+  +    G+  ++  YN++I
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360

Query: 469 SEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFI 528
             H K+ +I    A +++M ++G    + S  T+I  FC   +  E+   F+     G  
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420

Query: 529 PTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
           P   TY ++I G+C+E  +   +K +  +   G  P  +AY  L+  L
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468



 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 1/253 (0%)

Query: 146 EVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEE 205
           E ++C++R+  + G + E  E++ +   QG+ P       ++   CE+G       +   
Sbjct: 214 ERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHT 273

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           M A    P    Y+ ++   C     LEA      + D+G+  D   +T +I  FCEKG+
Sbjct: 274 MIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGW 333

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
              A + + +    G++PN   +  MI G  KRG I        EM+  G+   + +   
Sbjct: 334 LGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNT 393

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           +I G C  G +++AF +F K +      PN +TY A+I G+C+++K+ +   L   +K  
Sbjct: 394 MIKGFCSHGKSDEAFEIF-KNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKAL 452

Query: 386 GLIPNTNTYTTLI 398
           GL P+   Y  L+
Sbjct: 453 GLKPSGMAYAALV 465



 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 5/275 (1%)

Query: 165 VEMVFEMHNQGMVP---NTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVM 221
           ++  +E+H + MV    +++ +  +++  C+ G V     L ++   +G+ P    Y  +
Sbjct: 196 LDRFWELHKE-MVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKL 254

Query: 222 VVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGL 281
           +  +C++GN     + L  M+          +  II   C       A   F    D G 
Sbjct: 255 ISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGY 314

Query: 282 KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFR 341
            P+ + +T+MI G C++G +  A ++  EM+ +G +PN + +  +I G  K+G       
Sbjct: 315 APDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEA 374

Query: 342 LFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGH 401
            + +++R+      +L+   MI G+C   K + A  +   M E G+ PN  TY  LI G 
Sbjct: 375 FYNEMLRN-GYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGF 433

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGL 436
           CK    E+   L   +   G  P+   Y A+V  L
Sbjct: 434 CKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468



 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/341 (22%), Positives = 144/341 (42%), Gaps = 14/341 (4%)

Query: 277 SDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWT 336
           S+    P  ++   +   L    ++K A   L+     G+KP        +  L ++G  
Sbjct: 105 SNYDYTPGPVSLNILFGALLDGKAVKAAKSFLD---TTGFKPEPTLLEQYVKCLSEEGLV 161

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT 396
           E+A  ++  +++      +V+T  +++ G  +  KL+R   L   M E     ++     
Sbjct: 162 EEAIEVY-NVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRC 218

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
           LI   C  G+    ++L+    ++G  P    Y  ++ G C+ G     Y  + +  H  
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGN----YACMSEVLHTM 274

Query: 457 LEADKVT----YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
           +  +       Y  +I   C      +A  +F  +   G  PD   YTT+I  FC +  +
Sbjct: 275 IAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWL 334

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
             +   + E ++ G  P +  Y  MI G+ + G +++   F++ M  +G     ++  T+
Sbjct: 335 GSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTM 394

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
           I G C   K DEA  ++ +M E G+ P  +T   L   +CK
Sbjct: 395 IKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCK 435



 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/301 (21%), Positives = 124/301 (41%), Gaps = 5/301 (1%)

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           G  P        +    + G  E A ++ N++   G S ++ T N+++ G  K  ++   
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
           +++ K+   +  +++++    LI   C   D+ +   L  +  K G+ P  + Y  LI+ 
Sbjct: 200 WELHKEMVESEFDSERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           FC     +         + +   P+   Y  +I G C       A   F  + D G  PD
Sbjct: 258 FCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPD 317

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD 625
            + Y T+I G C++  L  AR L+  MI+KG+ P E     + + + K  +        +
Sbjct: 318 RVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYN 377

Query: 626 RLEKKLW---IRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESN 682
            + +  +   + +  T+++  CS  K   A   F  + +     N +T  A +    + N
Sbjct: 378 EMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKEN 437

Query: 683 K 683
           K
Sbjct: 438 K 438



 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 84/168 (50%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           EA  +   + ++G  P+      +++  CE G +  A+ L+ EM  +G+ P+  +Y VM+
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360

Query: 223 VAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK 282
             + K G +   + + + ML  G+     S   +I  FC  G +  A   F   S+ G+ 
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           PN I + ++I+G CK   +++  ++ +E+   G KP+   + AL+  L
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468


>AT4G20740.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr4:11126151-11128334 FORWARD
           LENGTH=727
          Length = 727

 Score =  141 bits (355), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/544 (23%), Positives = 229/544 (42%), Gaps = 39/544 (7%)

Query: 93  VTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCM- 151
           V  V  L  +A   VA  FFHWA     ++H    Y   A  L  NG+ + A ++ + M 
Sbjct: 128 VAEVLKLGNDAA--VAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMD 185

Query: 152 --------------VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVD 197
                         +R  A+  R      +  +M   G  P     N +M    + G  D
Sbjct: 186 SQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFD 245

Query: 198 YAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLII 257
            A  ++E+    G+  +S ++ ++V   CK G + E  + L  M +     D  ++T +I
Sbjct: 246 LALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMI 305

Query: 258 SEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
                +G    +LR + +     +KP+++ + +++ GLCK G +++ +E+  EM  +   
Sbjct: 306 KTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQIL 365

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
            +   +  LI+G    G    A  L+  LV S     ++  Y A+I G C  +++++A  
Sbjct: 366 IDREIYRVLIEGFVADGKVRSACNLWEDLVDS-GYIADIGIYNAVIKGLCSVNQVDKAYK 424

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG-FSPNICTY-NAIVDG 435
           L     E+ L P+  T + ++  +       R  D  N++ R G     +  Y       
Sbjct: 425 LFQVAIEEELEPDFETLSPIMVAYVV---MNRLSDFSNVLERIGELGYPVSDYLTQFFKL 481

Query: 436 LC----KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           LC    K     + + +LK   H  +      YNIL+    K  DI+++L+LF +M K G
Sbjct: 482 LCADEEKNAMALDVFYILKTKGHGSVS----VYNILMEALYKMGDIQKSLSLFYEMRKLG 537

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
            +PD  SY+  I  F  +  +  +  F E+ +    +P+   Y S+  G C+ G +   +
Sbjct: 538 FEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVM 597

Query: 552 KFFHR-MSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
                 + +    P    Y   +  +CK S  ++   + D M ++G+   EV        
Sbjct: 598 LLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVI------- 650

Query: 611 YCKI 614
           YC I
Sbjct: 651 YCAI 654



 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 162/369 (43%), Gaps = 3/369 (0%)

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
           +G+K +   + A    L + G    A +L  +L+ S+   P+   +  +I  +  + +  
Sbjct: 152 KGYKHDFAAYNAFAYCLNRNGHFRAADQL-PELMDSQGRPPSEKQFEILIRMHADNRRGL 210

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
           R   +  +MK+ G  P    Y  ++D   K G F+ A  +      +G      T+  +V
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270

Query: 434 DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ 493
            GLCK GR++E  ++L+    N  + D   Y  +I     + ++  +L ++ +M +  I+
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330

Query: 494 PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKF 553
           PD+ +Y TL+   C++ R+      F E      +  +  Y  +I G+  +G +  A   
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNL 390

Query: 554 FHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
           +  + D G + D   Y  +I GLC  +++D+A  L+   IE+ L P   T   +   Y  
Sbjct: 391 WEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVV 450

Query: 614 IDDCCSAMVILDRLEKKLWIRTA--TTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTL 671
           ++       +L+R+ +  +  +   T   + LC++ +    AL    +L    H +    
Sbjct: 451 MNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVY 510

Query: 672 AAFMTACYE 680
              M A Y+
Sbjct: 511 NILMEALYK 519



 Score =  105 bits (263), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/454 (20%), Positives = 189/454 (41%), Gaps = 48/454 (10%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V+   + GR++E +E++  M      P+      ++K     G +D +  +++EM    
Sbjct: 269 LVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDE 328

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD  +Y  +VV  CK G V    +    M  +  L+D   + ++I  F   G    A 
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC 388

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             +    D G   ++  + ++I+GLC    + +A+++ +  + +  +P+  T +      
Sbjct: 389 NLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLS------ 442

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
                                  P ++ Y  M       ++L+    +L R+ E G  P 
Sbjct: 443 -----------------------PIMVAYVVM-------NRLSDFSNVLERIGELGY-PV 471

Query: 391 TNTYTTLIDGHCKAGNFER---AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
           ++  T      C   + E+   A D+  ++  +G   ++  YN +++ L K G +Q++  
Sbjct: 472 SDYLTQFFKLLC--ADEEKNAMALDVFYILKTKGHG-SVSVYNILMEALYKMGDIQKSLS 528

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           +  +    G E D  +Y+I I    ++ D+K A +   K+ +    P I +Y +L    C
Sbjct: 529 LFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLC 588

Query: 508 REKRMSESEMFFEEA---VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
           +   +    +   E    V  G  P +  Y   +C  C+  N    +K    M+  G   
Sbjct: 589 QIGEIDAVMLLVRECLGNVESG--PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFI 646

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
           + + Y  +ISG+ K   +  AR ++  + ++ ++
Sbjct: 647 NEVIYCAIISGMSKHGTIKVAREVFTELKKRKVM 680


>AT2G17670.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:7674420-7675811 FORWARD
           LENGTH=463
          Length = 463

 Score =  140 bits (354), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 151/299 (50%), Gaps = 4/299 (1%)

Query: 171 MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGN 230
           M N G+ P+  T ++ ++  CE G VD A+ L +E++ +   PD+ +Y  ++   CK  +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209

Query: 231 VLEADKWLSVMLDRGFLV--DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINF 288
           +    +++  M D  F V  D  SFT++I   C       A+    K  + G KP+   +
Sbjct: 210 LHVVYEFVDEMRD-DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268

Query: 289 TSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVR 348
            ++++G C      +A  + ++M  +G +P+  T+  LI GL K G  E+A R++LK + 
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA-RMYLKTMV 327

Query: 349 SENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFE 408
               +P+  TYT+++NG CR  +   A  LL  M+ +G  PN  TY TL+ G CKA   +
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMD 387

Query: 409 RAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           +  +L  +M   G       Y  +V  L K G+V EAY++      +   +D   Y+ L
Sbjct: 388 KGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446



 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 183/408 (44%), Gaps = 19/408 (4%)

Query: 199 AQYLFEEMSARGVHP-DSASYRVMVVAYCKMGNVLEADKWLSVML--DRGFLVDNASFTL 255
           A+ LF  ++A    P D   +  ++ +Y  +  V +  K    +L     F    ++F +
Sbjct: 68  AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127

Query: 256 IISEFCEKGFAT--RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
           ++S  C    ++     R  +   + GL+P+ +     +  LC+ G + +A ++++E+  
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
           +   P+ YT+  L+  LCK       +    ++    + KP+++++T +I+  C    L 
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
            A  L+ ++   G  P+   Y T++ G C       A  +   M  EG  P+  TYN ++
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307

Query: 434 DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ 493
            GL K GRV+EA   LK     G E D  TY  L++  C++ +   AL+L  +M   G  
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA 367

Query: 494 PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKF 553
           P+  +Y TL+   C+ + M +    +E     G       Y +++    + G +  A + 
Sbjct: 368 PNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427

Query: 554 FHRMSDHGCVPDSIAYGTLISGL--CKQSKLDEARGLYDSMIEKGLIP 599
           F    D   + D+ AY TL + L   K++K            E+GL+P
Sbjct: 428 FDYAVDSKSLSDASAYSTLETTLKWLKKAK------------EQGLVP 463



 Score =  129 bits (325), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 163/348 (46%), Gaps = 11/348 (3%)

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENN-KPNVLTYTAMINGYCR--DDKLNRAEMLL 379
           H +++             +LF  +++S+ N +P   T+  +++  CR  D  ++    +L
Sbjct: 88  HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
             M   GL P+  T    +   C+ G  + A DLM  ++ +   P+  TYN ++  LCK 
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207

Query: 440 GRVQEAYKM---LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI 496
             +   Y+    ++D F   ++ D V++ ILI   C   ++++A+ L SK+  +G +PD 
Sbjct: 208 KDLHVVYEFVDEMRDDFD--VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265

Query: 497 HSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR 556
             Y T++  FC   + SE+   +++    G  P + TY ++I G  + G +  A  +   
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325

Query: 557 MSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD 616
           M D G  PD+  Y +L++G+C++ +   A  L + M  +G  P + T  TL +  CK   
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL 385

Query: 617 CCSAMVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLD 661
               M + + ++    KL      TLVR L    KV  A   F   +D
Sbjct: 386 MDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVD 433



 Score =  129 bits (324), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 145/283 (51%), Gaps = 2/283 (0%)

Query: 134 SLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM 193
           +L+ N  L+         VRS  E GR+ EA +++ E+  +   P+T T N ++K  C+ 
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207

Query: 194 GLVDYAQYLFEEMSAR-GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNAS 252
             +       +EM     V PD  S+ +++   C   N+ EA   +S + + GF  D   
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           +  I+  FC     + A+  + K  + G++P+ I + ++I GL K G +++A   L+ MV
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
             G++P+  T+T+L++G+C+KG +  A  L L+ + +    PN  TY  +++G C+   +
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSL-LEEMEARGCAPNDCTYNTLLHGLCKARLM 386

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
           ++   L   MK  G+   +N Y TL+    K+G    A+++ +
Sbjct: 387 DKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429



 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 11/229 (4%)

Query: 161 LKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRV 220
           L+EA+ +V ++ N G  P+    N +MK  C +     A  ++++M   GV PD  +Y  
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           ++    K G V EA  +L  M+D G+  D A++T +++  C KG +  AL    +    G
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG 365

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF 340
             PN   + +++ GLCK   + +  E+ E M   G K     +  L+  L K G   +A+
Sbjct: 366 CAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAY 425

Query: 341 RLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
            +F   V S++           ++       L      L + KEQGL+P
Sbjct: 426 EVFDYAVDSKS-----------LSDASAYSTLETTLKWLKKAKEQGLVP 463



 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 86/186 (46%), Gaps = 3/186 (1%)

Query: 127 LYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLV 186
           +Y+V   S +GN   +    +   +++ F  + +  EAV +  +M  +G+ P+  T N +
Sbjct: 250 MYLV---SKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306

Query: 187 MKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGF 246
           +    + G V+ A+   + M   G  PD+A+Y  ++   C+ G  L A   L  M  RG 
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGC 366

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
             ++ ++  ++   C+     + +  +      G+K     + +++  L K G + +A+E
Sbjct: 367 APNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYE 426

Query: 307 MLEEMV 312
           + +  V
Sbjct: 427 VFDYAV 432


>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:28133933-28135381 FORWARD
           LENGTH=453
          Length = 453

 Score =  138 bits (348), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 147/303 (48%), Gaps = 2/303 (0%)

Query: 167 MVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYC 226
           ++  M +  + P+ +T  +V +     G  D A  LF  M   G   D AS+  ++   C
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172

Query: 227 KMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLI 286
           K   V +A +    +  R F VD  ++ +I++ +C      +AL    +  + G+ PNL 
Sbjct: 173 KSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231

Query: 287 NFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 346
            + +M++G  + G I+ A+E   EM  +  + +V T+T ++ G    G  ++A  +F ++
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291

Query: 347 VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN 406
           +R E   P+V TY AMI   C+ D +  A ++   M  +G  PN  TY  LI G   AG 
Sbjct: 292 IR-EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
           F R  +LM  M  EG  PN  TYN ++    +   V++A  + +         +  TYNI
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410

Query: 467 LIS 469
           LIS
Sbjct: 411 LIS 413



 Score =  136 bits (342), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 146/290 (50%), Gaps = 2/290 (0%)

Query: 155 FAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
           +A  G+  +AV++   MH  G   +  + N ++ + C+   V+ A  LF  +  R    D
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVD 194

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH 274
           + +Y V++  +C +    +A + L  M++RG   +  ++  ++  F   G    A  +F 
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFL 254

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           +      + +++ +T+++ G    G IK+A  + +EM+ +G  P+V T+ A+I  LCKK 
Sbjct: 255 EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 314

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
             E A  +F ++VR    +PNV TY  +I G     + +R E L+ RM+ +G  PN  TY
Sbjct: 315 NVENAVVMFEEMVR-RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY 373

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQE 444
             +I  + +    E+A  L   M      PN+ TYN ++ G+  + R ++
Sbjct: 374 NMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423



 Score =  136 bits (342), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 2/333 (0%)

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ 303
           R ++ D +SF L I                H+   + + P+   F  + E     G   +
Sbjct: 85  REYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDK 144

Query: 304 AFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMI 363
           A ++   M   G   ++ +   ++D LCK    EKA+ LF  L        + +TY  ++
Sbjct: 145 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL--RGRFSVDTVTYNVIL 202

Query: 364 NGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS 423
           NG+C   +  +A  +L  M E+G+ PN  TY T++ G  +AG    A++    M +    
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262

Query: 424 PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALAL 483
            ++ TY  +V G    G ++ A  +  +    G+     TYN +I   CK+ +++ A+ +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322

Query: 484 FSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCR 543
           F +M + G +P++ +Y  LI         S  E   +     G  P  +TY  MI  Y  
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382

Query: 544 EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
              +  A+  F +M    C+P+   Y  LISG+
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415



 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 1/281 (0%)

Query: 347 VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN 406
           +RS    P+  T+  +   Y    K ++A  L   M E G   +  ++ T++D  CK+  
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
            E+A++L   + R  FS +  TYN I++G C   R  +A ++LK+    G+  +  TYN 
Sbjct: 177 VEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           ++    +   I+ A   F +M K   + D+ +YTT++  F     +  +   F+E +R G
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
            +P+  TY +MI   C++ N+  A+  F  M   G  P+   Y  LI GL    +     
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355

Query: 587 GLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
            L   M  +G  P   T   +   Y +  +   A+ + +++
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396



 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 139/331 (41%), Gaps = 42/331 (12%)

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
           W PN      L++ + K+ W               N+ P  L +   ++ + R+      
Sbjct: 54  WTPN------LVNSVLKRLW---------------NHGPKALQFFHFLDNHHRE------ 86

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
                       + + +++   ID   +       + L++ M      P+  T+  + + 
Sbjct: 87  -----------YVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAER 135

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
               G+  +A K+  +   +G   D  ++N ++   CK   +++A  LF  + +     D
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVD 194

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
             +Y  ++  +C  KR  ++    +E V  G  P   TY +M+ G+ R G +  A +FF 
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFL 254

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKID 615
            M    C  D + Y T++ G     ++  AR ++D MI +G++P   T   +    CK D
Sbjct: 255 EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 314

Query: 616 DCCSAMVILDRLEKKLWIRTATT---LVRKL 643
           +  +A+V+ + + ++ +    TT   L+R L
Sbjct: 315 NVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345



 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 80/180 (44%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M++ F   G+++ A E   EM  +    +  T   V+      G +  A+ +F+EM   G
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V P  A+Y  M+   CK  NV  A      M+ RG+  +  ++ ++I      G  +R  
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +  + G +PN   +  MI    +   +++A  + E+M      PN+ T+  LI G+
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415



 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 7/165 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V  F   G +K A  +  EM  +G++P+  T N ++++ C+   V+ A  +FEEM  RG
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P+  +Y V++      G     ++ +  M + G   +  ++ ++I  + E     +AL
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 390

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
             F K       PNL  +  +I G+  R       +  E+MV  G
Sbjct: 391 GLFEKMGSGDCLPNLDTYNILISGMFVR-------KRSEDMVVAG 428


>AT1G73710.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:27721190-27724165 FORWARD
           LENGTH=991
          Length = 991

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 197/438 (44%), Gaps = 14/438 (3%)

Query: 180 TQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLS 239
           T T N ++ +  + G ++ A  LF EM   GV  D+ ++  M+      G++ EA+  L 
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364

Query: 240 VMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRG 299
            M ++G   D  ++ +++S   + G    AL Y+ K   +GL P+ +   +++  LC+R 
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424

Query: 300 SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF----LKLVRSENNKPN 355
            + +   ++ EM     + + ++   ++     +G   +A  LF    L  V S      
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST---- 480

Query: 356 VLTYTAMINGYCRDDKLNRAEMLL-GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
             T  A+I+ Y        AE +  G+    G   +   Y  +I  + KA   E+A  L 
Sbjct: 481 --TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLF 538

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
             M  +G  P+ CTYN++   L     V EA ++L +   +G +    TY  +I+ + + 
Sbjct: 539 KGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRL 598

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
             +  A+ L+  M K+G++P+   Y +LI  F     + E+  +F      G        
Sbjct: 599 GLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVL 658

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
           TS+I  Y + G L  A + + +M D    PD  A  +++S       + EA  +++++ E
Sbjct: 659 TSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALRE 718

Query: 595 KGLIPCEVTRI-TLAYEY 611
           KG   C+V    T+ Y Y
Sbjct: 719 KGT--CDVISFATMMYLY 734



 Score =  136 bits (343), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 130/550 (23%), Positives = 220/550 (40%), Gaps = 92/550 (16%)

Query: 169 FEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKM 228
           F+ H Q  VPN    N+V++     G  D  +  + EM+  GV P + +Y ++V  Y K 
Sbjct: 135 FQSH-QSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKA 193

Query: 229 GNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKF----SDMGLKP- 283
           G V EA  W+  M  R    D  +   ++  F   G   RA R+F  +     D+ L   
Sbjct: 194 GLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSI 253

Query: 284 -------------NLINFTSM-IEGLCKRGSIKQAFEMLEEMVCQGWKPNVY-THTALID 328
                        NL  F SM +  +  R  I+++            KP +  T   LID
Sbjct: 254 DDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLID 313

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
              K G    A  LF ++++S     + +T+  MI+       L+ AE LL +M+E+G+ 
Sbjct: 314 LYGKAGRLNDAANLFSEMLKS-GVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGIS 372

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           P+T TY  L+  H  AG+ E A +    + + G  P+  T+ A++  LC++  V E   +
Sbjct: 373 PDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAV 432

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALF------------------------ 484
           + +   N +  D+ +  +++  +  +  + QA ALF                        
Sbjct: 433 IAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEK 492

Query: 485 -----------SKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF-------------- 519
                       K   SG + D+  Y  +I  + + K   ++   F              
Sbjct: 493 GLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECT 552

Query: 520 --------------EEAVRF-------GFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS 558
                         +EA R        G  P  +TY +MI  Y R G L+ A+  +  M 
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAME 612

Query: 559 DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCC 618
             G  P+ + YG+LI+G  +   ++EA   +  M E G+    +   +L   Y K+    
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672

Query: 619 SAMVILDRLE 628
            A  + D+++
Sbjct: 673 EARRVYDKMK 682



 Score =  135 bits (340), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/484 (21%), Positives = 220/484 (45%), Gaps = 24/484 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+ +    G L EA  ++ +M  +G+ P+T+T N+++ +  + G ++ A   + ++   G
Sbjct: 346 MIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVG 405

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD+ ++R ++   C+   V E +  ++ M      +D  S  +I+  +  +G   +A 
Sbjct: 406 LFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAK 465

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML-EEMVCQGWKPNVYTHTALIDG 329
             F +F  +    +     ++I+   ++G   +A  +   +    G + +V  +  +I  
Sbjct: 466 ALFERFQ-LDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKA 524

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
             K    EKA  LF K ++++   P+  TY ++       D ++ A+ +L  M + G  P
Sbjct: 525 YGKAKLHEKALSLF-KGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKP 583

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
              TY  +I  + + G    A DL   M + G  PN   Y ++++G  + G V+EA +  
Sbjct: 584 GCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF 643

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
           +    +G++++ +    LI  + K   +++A  ++ KM  S   PD+ +  +++++    
Sbjct: 644 RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADL 703

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
             +SE+E  F  A+R        ++ +M+  Y   G L  AI+    M + G + D  ++
Sbjct: 704 GIVSEAESIF-NALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSF 762

Query: 570 GTLISGLCKQSKLDEARGLYDSM-------------------IEKGLIPCE-VTRITLAY 609
             +++      +L E   L+  M                   ++KG +P E V+++  AY
Sbjct: 763 NQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAY 822

Query: 610 EYCK 613
              K
Sbjct: 823 NEAK 826



 Score =  105 bits (261), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/419 (21%), Positives = 179/419 (42%), Gaps = 39/419 (9%)

Query: 127 LYIVCATSLIGNGNLQ-KAHEVMQ--CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTL 183
           L++   T   G  N+  + ++V++   M++++ +    ++A+ +   M NQG  P+  T 
Sbjct: 494 LWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTY 553

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
           N + ++   + LVD AQ +  EM   G  P   +Y  M+ +Y ++G + +A      M  
Sbjct: 554 NSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK 613

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ 303
            G   +   +  +I+ F E G    A++YF    + G++ N I  TS+I+   K G +++
Sbjct: 614 TGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEE 673

Query: 304 AFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMI 363
           A  + ++M      P+V    +++      G   +A  +F  L   E    +V+++  M+
Sbjct: 674 ARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL--REKGTCDVISFATMM 731

Query: 364 NGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE-GF 422
             Y     L+ A  +   M+E GL+ +  ++  ++  +   G      +L + M  E   
Sbjct: 732 YLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKL 791

Query: 423 SPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN-----------------GLEA------ 459
             +  T+  +   L K G   EA   L+  ++                  GL A      
Sbjct: 792 LLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESC 851

Query: 460 ----------DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
                     +   YN +I  +    DI  AL  + +M + G++PDI +   L+ ++ +
Sbjct: 852 QELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGK 910



 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 118/527 (22%), Positives = 211/527 (40%), Gaps = 71/527 (13%)

Query: 156 AEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDS 215
           A+ G ++ A+E   ++   G+ P+T T   V+ I C+  +V   + +  EM    +  D 
Sbjct: 386 ADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDE 445

Query: 216 ASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHK 275
            S  V++  Y   G V++A K L        ++ + +   +I  + EKG    A   F+ 
Sbjct: 446 HSVPVIMQMYVNEGLVVQA-KALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYG 504

Query: 276 FSDM-GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
             +M G + +++ +  MI+   K    ++A  + + M  QG  P+  T+ +L   L    
Sbjct: 505 KRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVD 564

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
             ++A R+  +++ S   KP   TY AMI  Y R   L+ A  L   M++ G+ PN   Y
Sbjct: 565 LVDEAQRILAEMLDS-GCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVY 623

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA---YKMLKD 451
            +LI+G  ++G  E A     +M   G   N     +++    K G ++EA   Y  +KD
Sbjct: 624 GSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD 683

Query: 452 G---------------------------FHNGLEA----DKVTYNILISEHCKQADIKQA 480
                                         N L      D +++  ++  +     + +A
Sbjct: 684 SEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEA 743

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES-EMFFEEAVRFGFIPTKRTYTSMIC 539
           + +  +M +SG+  D  S+  ++A +  + ++SE  E+F E  V    +    T+ ++  
Sbjct: 744 IEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFT 803

Query: 540 GYCREGNLTMAIK--------------------FFHRMS------------DHGCVP-DS 566
              + G  + A+                      F  M               G +P + 
Sbjct: 804 LLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREH 863

Query: 567 IAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
            AY  +I        +D A   Y  M EKGL P  VT+  L   Y K
Sbjct: 864 FAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGK 910



 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 144/382 (37%), Gaps = 75/382 (19%)

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
           W E+  R+F      ++  PNV+ Y  ++    R  K +   +    M   G++P  NTY
Sbjct: 125 W-ERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTY 183

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV--------------------- 433
             L+D + KAG  + A   +  M +    P+  T   +V                     
Sbjct: 184 GMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCA 243

Query: 434 ----------DGLCKKGRVQE--------AYKMLKDGFHNGLEAD--------------- 460
                     D   K G  Q         + ++ K G  N +E                 
Sbjct: 244 GKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPR 303

Query: 461 -KVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
              T+N LI  + K   +  A  LFS+M KSG+  D  ++ T+I        +SE+E   
Sbjct: 304 LTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLL 363

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
           ++    G  P  +TY  ++  +   G++  A++++ ++   G  PD++ +  ++  LC++
Sbjct: 364 KKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR 423

Query: 580 SKLDEARGLYDSM------IEKGLIPC---------EVTRITLAYEYCKIDDCCS----A 620
             + E   +   M      I++  +P           V +    +E  ++D   S    A
Sbjct: 424 KMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLA 483

Query: 621 MVILDRLEKKLWIRTATTLVRK 642
            VI    EK LW+   T    K
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGK 505



 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 137/323 (42%), Gaps = 6/323 (1%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
            +Q  H V+  ++++++++G L+EA  +  +M +    P+    N ++ +  ++G+V  A
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEA 709

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
           + +F  +  +G   D  S+  M+  Y  MG + EA +    M + G L D  SF  +++ 
Sbjct: 710 ESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMAC 768

Query: 260 FCEKGFATRALRYFHK-FSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
           +   G  +     FH+   +  L  +   F ++   L K G   +A   L+    +    
Sbjct: 769 YAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPL 828

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
                TA +      G    A     +L   E  + +   Y A+I  Y     ++ A   
Sbjct: 829 ATPAITATL--FSAMGLYAYALESCQELTSGEIPREH-FAYNAVIYTYSASGDIDMALKA 885

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
             RM+E+GL P+  T   L+  + KAG  E    + + ++     P+   + A+ D    
Sbjct: 886 YMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVS 945

Query: 439 KGRVQEAYKMLKDGFHNGLEADK 461
             R Q+   ++K       EA++
Sbjct: 946 ANR-QDLADVVKKEMSIAFEAER 967


>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:6204940-6209691 REVERSE
           LENGTH=1440
          Length = 1440

 Score =  137 bits (345), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 8/317 (2%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL-FLKL 346
           + +M+    + G   +A E+++ M  +G  P++ +   LI+   K G       +  L +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287

Query: 347 VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN 406
           VR+   +P+ +TY  +++   RD  L+ A  +   M+     P+  TY  +I  + + G 
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKK---GRVQEAYKMLKDGFHNGLEADKVT 463
              A  L   +  +GF P+  TYN+++    ++    +V+E Y+ ++     G   D++T
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ---KMGFGKDEMT 404

Query: 464 YNILISEHCKQADIKQALALFSKMAK-SGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           YN +I  + KQ  +  AL L+  M   SG  PD  +YT LI    +  R  E+     E 
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
           +  G  PT +TY+++ICGY + G    A   F  M   G  PD++AY  ++  L + ++ 
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNET 524

Query: 583 DEARGLYDSMIEKGLIP 599
            +A GLY  MI  G  P
Sbjct: 525 RKAWGLYRDMISDGHTP 541



 Score =  132 bits (331), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 167/363 (46%), Gaps = 7/363 (1%)

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ--AFEMLEE 310
           +  ++  +   G  ++A          G  P+LI+F ++I    K G +    A E+L+ 
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287

Query: 311 MVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDD 370
           +   G +P+  T+  L+    +    + A ++F  +  +   +P++ TY AMI+ Y R  
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMISVYGRCG 346

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
               AE L   ++ +G  P+  TY +L+    +  N E+  ++   M + GF  +  TYN
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406

Query: 431 AIVDGLCKKGRVQEAYKMLKD--GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
            I+    K+G++  A ++ KD  G  +G   D +TY +LI    K     +A AL S+M 
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGL-SGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
             GI+P + +Y+ LI  + +  +  E+E  F   +R G  P    Y+ M+    R     
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK-GLIPCEVTRITL 607
            A   +  M   G  P    Y  +I GL K+++ D+ +     M E  G+ P E++ + +
Sbjct: 526 KAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLV 585

Query: 608 AYE 610
             E
Sbjct: 586 KGE 588



 Score =  124 bits (310), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 123/520 (23%), Positives = 225/520 (43%), Gaps = 39/520 (7%)

Query: 138 NGNLQKAHEVMQCMVR--------SFAEI--GRLKE-------AVEMVFEMHNQGMVPNT 180
           +G   KA E++  M +        SF  +   RLK        AVE++  + N G+ P+ 
Sbjct: 238 SGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDA 297

Query: 181 QTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSV 240
            T N ++        +D A  +FE+M A    PD  +Y  M+  Y + G   EA++    
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFME 357

Query: 241 MLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGS 300
           +  +GF  D  ++  ++  F  +    +    + +   MG   + + + ++I    K+G 
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417

Query: 301 IKQAFEMLEEMV-CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
           +  A ++ ++M    G  P+  T+T LID L K   T +A  L  +++     KP + TY
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML-DVGIKPTLQTY 476

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
           +A+I GY +  K   AE     M   G  P+   Y+ ++D   +     +A+ L   M  
Sbjct: 477 SALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS 536

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH----NGLEADKVTYNILISEHCKQA 475
           +G +P+   Y  ++ GL K+ R  +  K ++D       N LE   V    L+   C   
Sbjct: 537 DGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSV----LVKGECFDL 592

Query: 476 DIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFE--EAVRFGFIPTKRT 533
             +Q     +    +G + +  +  +++  +    R SE+   FE  E ++     +KR 
Sbjct: 593 AARQLKVAIT----NGYELENDTLLSILGSYSSSGRHSEA---FELLEFLKEHASGSKRL 645

Query: 534 YT-SMICGYCREGNLTMAI-KFFHRMSDHG-CVPDSIAYGTLISGLCKQSKLDEARGLYD 590
            T ++I  +C+  NL+ A+ ++F     HG C   S  Y TL+          EA  ++ 
Sbjct: 646 ITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFS 705

Query: 591 SMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
            +   G    E    ++   YCK+    +A  ++++ E K
Sbjct: 706 DLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETK 745



 Score =  120 bits (301), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/449 (21%), Positives = 197/449 (43%), Gaps = 12/449 (2%)

Query: 146 EVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLV--DYAQYLF 203
           +V   M+  ++  G+  +A E+V  M  +G VP+  + N ++    + G +  + A  L 
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285

Query: 204 EEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEK 263
           + +   G+ PD+ +Y  ++ A  +  N+  A K    M       D  ++  +IS +   
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
           G A  A R F +    G  P+ + + S++    +  + ++  E+ ++M   G+  +  T+
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
             +I    K+G  + A +L+  +       P+ +TYT +I+   + ++   A  L+  M 
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
           + G+ P   TY+ LI G+ KAG  E A D  + M R G  P+   Y+ ++D L +    +
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525

Query: 444 EAYKMLKDGFHNGLEADKVTYNILI---SEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
           +A+ + +D   +G       Y ++I    +  +  DI++ +    ++   G+ P +   +
Sbjct: 526 KAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELC--GMNP-LEISS 582

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
            L+   C +    +     + A+  G+     T  S++  Y   G  + A +    + +H
Sbjct: 583 VLVKGECFDLAARQ----LKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEH 638

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLY 589
                 +    LI   CK + L  A   Y
Sbjct: 639 ASGSKRLITEALIVLHCKVNNLSAALDEY 667



 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 118/241 (48%)

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           YT +I  Y +     +AE ++G +++ G  P+  T+ +L+  + + G +ERA  + N M 
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
           R+G SP + + N ++  LC  GR++E Y ++++    G +  K +  +++    +  +I 
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
           +   ++S M  +G  P I  Y  +I + C+ KR+ ++E+   E     F      + SM+
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
             Y    +    ++ + R+ + G  PD   Y TLI   C+  + +E   L   M   GL 
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994

Query: 599 P 599
           P
Sbjct: 995 P 995



 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/431 (21%), Positives = 186/431 (43%), Gaps = 37/431 (8%)

Query: 199  AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
            A  +F ++   G     +  + MVV YCK+G    A + ++    +GF            
Sbjct: 700  ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGF------------ 747

Query: 259  EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
                  FA   +                 +T +IE   K+   ++A  ++  +   G  P
Sbjct: 748  -----HFACSPM-----------------YTDIIEAYGKQKLWQKAESVVGNLRQSGRTP 785

Query: 319  NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
            ++ T  +L+    + G  E+A  +F  ++R +   P V +   +++  C D +L    ++
Sbjct: 786  DLKTWNSLMSAYAQCGCYERARAIFNTMMR-DGPSPTVESINILLHALCVDGRLEELYVV 844

Query: 379  LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
            +  +++ G   + ++   ++D   +AGN      + + M   G+ P I  Y  +++ LCK
Sbjct: 845  VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904

Query: 439  KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
              RV++A  M+ +      + +   +N ++  +    D K+ + ++ ++ ++G++PD  +
Sbjct: 905  GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETT 964

Query: 499  YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS 558
            Y TLI ++CR++R  E  +  ++    G  P   TY S+I  + ++  L  A + F  + 
Sbjct: 965  YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024

Query: 559  DHGCVPDSIAYGTLISGLCKQSKLD-EARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDC 617
              G   D   Y T++  + + S  D +A  L   M   G+ P   T   L   Y    + 
Sbjct: 1025 SKGLKLDRSFYHTMMK-ISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083

Query: 618  CSAMVILDRLE 628
              A  +L  L+
Sbjct: 1084 QEAEKVLSNLK 1094



 Score =  112 bits (280), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/415 (21%), Positives = 164/415 (39%), Gaps = 36/415 (8%)

Query: 151  MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
            ++ ++ +    ++A  +V  +   G  P+ +T N +M    + G  + A+ +F  M   G
Sbjct: 758  IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817

Query: 211  VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
              P   S  +++ A C  G + E    +  + D GF +  +S  L++  F   G      
Sbjct: 818  PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877

Query: 271  RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
            + +      G  P +  +  MIE LCK   ++ A  M+ EM                   
Sbjct: 878  KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM------------------- 918

Query: 331  CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
                  E+A           N K  +  + +M+  Y   +   +   +  R+KE GL P+
Sbjct: 919  ------EEA-----------NFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPD 961

Query: 391  TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
              TY TLI  +C+    E  + LM  M   G  P + TY +++    K+  +++A ++ +
Sbjct: 962  ETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFE 1021

Query: 451  DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
            +    GL+ D+  Y+ ++          +A  L   M  +GI+P + +   L+  +    
Sbjct: 1022 ELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSG 1081

Query: 511  RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
               E+E             T   Y+S+I  Y R  +    I+    M   G  PD
Sbjct: 1082 NPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136



 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 129/595 (21%), Positives = 241/595 (40%), Gaps = 67/595 (11%)

Query: 135 LIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMG 194
           ++ N  L+        ++ + +    L  AV++  +M      P+  T N ++ +    G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT 254
           L   A+ LF E+  +G  PD+ +Y  ++ A+ +  N  +  +    M   GF  D  ++ 
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406

Query: 255 LIISEFCEKGFATRALRYFHKFSDM-GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
            II  + ++G    AL+ +     + G  P+ I +T +I+ L K     +A  ++ EM+ 
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
            G KP + T++ALI G  K G  E+A   F  ++RS   KP+ L Y+ M++   R ++  
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETR 525

Query: 374 RAE--------------------MLLGRMKEQ----------------GLIPNTNTYTTL 397
           +A                     M+LG MKE                 G+ P     + L
Sbjct: 526 KAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP-LEISSVL 584

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           + G C    F+ A   + +    G+     T  +I+      GR  EA+++L+    +  
Sbjct: 585 VKGEC----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHAS 640

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS--------YTTLIAVFCRE 509
            + ++    LI  HCK  ++  AL  +         P +H         Y TL+      
Sbjct: 641 GSKRLITEALIVLHCKVNNLSAALDEYFA------DPCVHGWCFGSSTMYETLLHCCVAN 694

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG----CVPD 565
           +  +E+   F +    G   ++    SM+  YC+ G    A +  ++    G    C P 
Sbjct: 695 EHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP- 753

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL--AYEYCKIDDCCSAMV- 622
              Y  +I    KQ    +A  +  ++ + G  P   T  +L  AY  C   +   A+  
Sbjct: 754 --MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFN 811

Query: 623 ILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
            + R      + +   L+  LC + ++    +   +L DM F +++ ++   + A
Sbjct: 812 TMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDA 866



 Score =  109 bits (273), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 6/274 (2%)

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           ++  + ++ W ++A  +F  L     + PN     A++    R ++ + A  +  R  E 
Sbjct: 162 VVKSVGQESW-QRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTR-AEP 219

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQE- 444
            +      Y  ++  + ++G F +A +L++ M + G  P++ ++N +++   K G +   
Sbjct: 220 TVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN 279

Query: 445 -AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
            A ++L    ++GL  D +TYN L+S   + +++  A+ +F  M     QPD+ +Y  +I
Sbjct: 280 LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI 339

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
           +V+ R    +E+E  F E    GF P   TY S++  + RE N     + + +M   G  
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
            D + Y T+I    KQ +LD A  LY  M  KGL
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDM--KGL 431



 Score =  109 bits (272), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/379 (21%), Positives = 171/379 (45%), Gaps = 8/379 (2%)

Query: 139  GNLQKAH-----EVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM 193
            GNL+++      +    ++ ++A+ G  + A  +   M   G  P  +++N+++   C  
Sbjct: 776  GNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVD 835

Query: 194  GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF 253
            G ++    + EE+   G     +S  +M+ A+ + GN+ E  K  S M   G+L     +
Sbjct: 836  GRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895

Query: 254  TLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
             ++I   C+      A     +  +   K  L  + SM++        K+  ++ + +  
Sbjct: 896  RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955

Query: 314  QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
             G +P+  T+  LI   C+    E+ + L ++ +R+    P + TY ++I+ + +   L 
Sbjct: 956  TGLEPDETTYNTLIIMYCRDRRPEEGY-LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014

Query: 374  RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
            +AE L   +  +GL  + + Y T++     +G+  +A  L+ +M   G  P + T + ++
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074

Query: 434  DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ 493
                  G  QEA K+L +     +E   + Y+ +I  + +  D    +    +M K G++
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134

Query: 494  PDIHSYTTLI--AVFCREK 510
            PD   +T  +  A F +EK
Sbjct: 1135 PDHRIWTCFVRAASFSKEK 1153



 Score =  108 bits (271), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/412 (19%), Positives = 178/412 (43%), Gaps = 2/412 (0%)

Query: 189  IACEMGLVDYAQYLFEEMSARGVH-PDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFL 247
            + C++G  + A  +  +   +G H   S  Y  ++ AY K     +A+  +  +   G  
Sbjct: 725  VYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRT 784

Query: 248  VDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEM 307
             D  ++  ++S + + G   RA   F+     G  P + +   ++  LC  G +++ + +
Sbjct: 785  PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844

Query: 308  LEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYC 367
            +EE+   G+K +  +   ++D   + G   +  +++  + ++    P +  Y  MI   C
Sbjct: 845  VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSM-KAAGYLPTIRLYRMMIELLC 903

Query: 368  RDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC 427
            +  ++  AE+++  M+E         + +++  +    ++++   +   +   G  P+  
Sbjct: 904  KGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDET 963

Query: 428  TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM 487
            TYN ++   C+  R +E Y +++   + GL+    TY  LIS   KQ  ++QA  LF ++
Sbjct: 964  TYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023

Query: 488  AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNL 547
               G++ D   Y T++ +       S++E   +     G  PT  T   ++  Y   GN 
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083

Query: 548  TMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
              A K    + D      ++ Y ++I    +    +        M ++GL P
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEP 1135


>AT1G16830.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:5760793-5762619 FORWARD
           LENGTH=608
          Length = 608

 Score =  137 bits (344), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 204/439 (46%), Gaps = 13/439 (2%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           +A+E+   M + G VPNT+ +N++M +  ++ +V+ A  +FE +  R       S+ + +
Sbjct: 126 KAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFF----SFDIAL 181

Query: 223 VAYCKMG---NVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
             +C  G   +++     L  M+  GF  +   F  I+   C  G  + A +        
Sbjct: 182 SHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS 241

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+  ++  ++ ++ G  + G  ++A ++  +M+  G  PN+ T+T+LI G    G  ++A
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           F +  K V+SE   P+++    MI+ Y R  +   A  +   ++++ L+P+  T+ +++ 
Sbjct: 302 FTVLSK-VQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILS 360

Query: 400 GHCKAGNFERAFDLMNLMSRE-GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
             C +G F    DL+  ++   G   ++ T N + +   K G    A K+L    +    
Sbjct: 361 SLCLSGKF----DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFA 416

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            D  TY + +S  C+    + A+ ++  + K     D H ++ +I       + + +   
Sbjct: 417 LDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHL 476

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
           F+  +   +     +YT  I G  R   +  A      M + G  P+   Y T+ISGLCK
Sbjct: 477 FKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCK 536

Query: 579 QSKLDEARGLYDSMIEKGL 597
           + + ++ R +    I++G+
Sbjct: 537 EKETEKVRKILRECIQEGV 555



 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 121/542 (22%), Positives = 233/542 (42%), Gaps = 37/542 (6%)

Query: 76  PRLHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSL 135
           PR + +  P  LTH+   +    L  +   +  L+FF W    + + H  R +      +
Sbjct: 28  PREYTAAKP--LTHDNVYSC---LRESPADLKTLNFFFWCAKQNNYFHDDRAF----DHM 78

Query: 136 IGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGL 195
           +G         V++ + R +  I R+ E +++       G     +   L+++I     +
Sbjct: 79  VG---------VVEKLTREYYSIDRIIERLKI------SGCEIKPRVFLLLLEIFWRGHI 123

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
            D A  ++  MS+ G  P++ +  +M+    K+  V  A +    +  R F     SF +
Sbjct: 124 YDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFF----SFDI 179

Query: 256 IISEFCEKGFATRALRY---FHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
            +S FC +G     +       +    G  PN   F  ++   C+ G + +AF+++  M+
Sbjct: 180 ALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMI 239

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
           C G   +V   + L+ G  + G  +KA  LF K+++     PN++TYT++I G+     +
Sbjct: 240 CSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQI-GCSPNLVTYTSLIKGFVDLGMV 298

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
           + A  +L +++ +GL P+      +I  + + G FE A  +   + +    P+  T+ +I
Sbjct: 299 DEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASI 358

Query: 433 VDGLCKKGRVQEAYKMLKDGFHN-GLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           +  LC  G+    + ++    H  G + D VT N+L +   K      AL + S M+   
Sbjct: 359 LSSLCLSGK----FDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKD 414

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
              D ++YT  ++  CR      +   ++  ++         ++++I      G    A+
Sbjct: 415 FALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAV 474

Query: 552 KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEY 611
             F R        D ++Y   I GL +  +++EA  L   M E G+ P   T  T+    
Sbjct: 475 HLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGL 534

Query: 612 CK 613
           CK
Sbjct: 535 CK 536



 Score =  112 bits (280), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 4/317 (1%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   +V  F   G  ++AV++  +M   G  PN  T   ++K   ++G+VD A  +  ++
Sbjct: 249 VWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV 308

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
            + G+ PD     +M+  Y ++G   EA K  + +  R  + D  +F  I+S  C  G  
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF 368

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
               R  H    +G   +L+    +     K G    A ++L  M  + +  + YT+T  
Sbjct: 369 DLVPRITH---GIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVY 425

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           +  LC+ G    A +++ K++  E    +   ++A+I+      K N A  L  R   + 
Sbjct: 426 LSALCRGGAPRAAIKMY-KIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEK 484

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
              +  +YT  I G  +A   E A+ L   M   G  PN  TY  I+ GLCK+   ++  
Sbjct: 485 YPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVR 544

Query: 447 KMLKDGFHNGLEADKVT 463
           K+L++    G+E D  T
Sbjct: 545 KILRECIQEGVELDPNT 561



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 146/366 (39%), Gaps = 31/366 (8%)

Query: 355 NVLTYTAMINGYCRDD-----------KLNRA----EMLLGRMKEQGLIPNTNTYTTLID 399
           N   + A  N Y  DD           KL R     + ++ R+K  G       +  L++
Sbjct: 57  NFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLE 116

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD-GFHNGLE 458
              +   +++A ++   MS  GF PN    N ++D   K   V  A ++ +   F N   
Sbjct: 117 IFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFF- 175

Query: 459 ADKVTYNILISEHCKQA---DIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES 515
               +++I +S  C +    D+     +  +M   G  P+   +  ++ + CR   +SE+
Sbjct: 176 ----SFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEA 231

Query: 516 EMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
                  +  G   +   ++ ++ G+ R G    A+  F++M   GC P+ + Y +LI G
Sbjct: 232 FQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKG 291

Query: 576 LCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWI-- 633
                 +DEA  +   +  +GL P  V    + + Y ++     A  +   LEK+  +  
Sbjct: 292 FVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPD 351

Query: 634 -RTATTLVRKLCSERKVGMAALFFHKL-LDMDFHVNRVTLAAFMTACYESNKYALVSDLS 691
             T  +++  LC   K  +     H +  D D     +    F    Y  N YAL   LS
Sbjct: 352 QYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGY--NSYAL-KVLS 408

Query: 692 ARIYKD 697
              YKD
Sbjct: 409 IMSYKD 414


>AT4G01400.3 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 15 growth stages; CONTAINS
           InterPro DOMAIN/s: Pentatricopeptide repeat
           (InterPro:IPR002885); BEST Arabidopsis thaliana protein
           match is: Pentatricopeptide repeat (PPR) superfamily
           protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
           12380 proteins in 263 species: Archae - 4; Bacteria -
           27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
           - 0; Other Eukaryotes - 935 (source: NCBI BLink). |
           chr4:575843-577243 REVERSE LENGTH=466
          Length = 466

 Score =  135 bits (339), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 190/424 (44%), Gaps = 58/424 (13%)

Query: 99  LAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNG-------NLQKAH------ 145
           +A  +  ++A   F +A     FRH    +++    L G G       ++   H      
Sbjct: 58  IASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKL-GRGRYFNLIDDVLAKHRSSGYP 116

Query: 146 ---EVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKI-ACEMGLVDYAQY 201
              E+   +++ +AE    ++ +   ++M      P  + LN ++ +     G +  A  
Sbjct: 117 LTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE 176

Query: 202 LFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFC 261
           LF+     GV P++ SY                                    L++  FC
Sbjct: 177 LFKSSRLHGVMPNTRSY-----------------------------------NLLMQAFC 201

Query: 262 EKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVY 321
                + A + F K  +  + P++ ++  +I+G C++G +  A E+L++M+ +G+ P+  
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRL 261

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
           ++T L++ LC+K    +A++L  ++ + +   P+++ Y  MI G+CR+D+   A  +L  
Sbjct: 262 SYTTLLNSLCRKTQLREAYKLLCRM-KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDD 320

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
           M   G  PN+ +Y TLI G C  G F+     +  M  +GFSP+    N +V G C  G+
Sbjct: 321 MLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 380

Query: 442 VQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTT 501
           V+EA  +++    NG      T+ ++I   C + D  + + LF    +  ++ +I   T 
Sbjct: 381 VEEACDVVEVVMKNGETLHSDTWEMVIPLICNE-DESEKIKLF---LEDAVKEEITGDTR 436

Query: 502 LIAV 505
           ++ V
Sbjct: 437 IVDV 440



 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 144/300 (48%), Gaps = 2/300 (0%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCK-KGWTEKAFRLFLKL 346
           FT +I+   +    ++      +M+   + P       ++D L   +G+ +KAF LF K 
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELF-KS 180

Query: 347 VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN 406
            R     PN  +Y  ++  +C +D L+ A  L G+M E+ ++P+ ++Y  LI G C+ G 
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
              A +L++ M  +GF P+  +Y  +++ LC+K +++EAYK+L      G   D V YN 
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           +I   C++     A  +   M  +G  P+  SY TLI   C +    E + + EE +  G
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
           F P       ++ G+C  G +  A      +  +G    S  +  +I  +C + + ++ +
Sbjct: 361 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIK 420



 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 120/242 (49%), Gaps = 1/242 (0%)

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
            N  + +L + +  G       +T LI  + +A   E+       M    F+P     N 
Sbjct: 100 FNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNR 159

Query: 432 IVDGLCK-KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
           I+D L   +G +Q+A+++ K    +G+  +  +YN+L+   C   D+  A  LF KM + 
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
            + PD+ SY  LI  FCR+ +++ +    ++ +  GF+P + +YT+++   CR+  L  A
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
            K   RM   GC PD + Y T+I G C++ +  +AR + D M+  G  P  V+  TL   
Sbjct: 280 YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339

Query: 611 YC 612
            C
Sbjct: 340 LC 341



 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 115/256 (44%), Gaps = 3/256 (1%)

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G  ++AF+L       G  PN  +YN ++   C    +  AY++        +  D  +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
            ILI   C++  +  A+ L   M   G  PD  SYTTL+   CR+ ++ E+         
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
            G  P    Y +MI G+CRE     A K    M  +GC P+S++Y TLI GLC Q   DE
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348

Query: 585 ARGLYDSMIEKGLIPCEVTRITLAYEYC---KIDDCCSAMVILDRLEKKLWIRTATTLVR 641
            +   + MI KG  P       L   +C   K+++ C  + ++ +  + L   T   ++ 
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 408

Query: 642 KLCSERKVGMAALFFH 657
            +C+E +     LF  
Sbjct: 409 LICNEDESEKIKLFLE 424



 Score =  120 bits (300), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 109/225 (48%)

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNA 431
           L +A  L    +  G++PNT +Y  L+   C   +   A+ L   M      P++ +Y  
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230

Query: 432 IVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           ++ G C+KG+V  A ++L D  + G   D+++Y  L++  C++  +++A  L  +M   G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
             PD+  Y T+I  FCRE R  ++    ++ +  G  P   +Y ++I G C +G      
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350

Query: 552 KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           K+   M   G  P       L+ G C   K++EA  + + +++ G
Sbjct: 351 KYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395



 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 3/180 (1%)

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
           YKML+  F    +      ++L+S    +  +++A  LF      G+ P+  SY  L+  
Sbjct: 143 YKMLEFNFTPQPKHLNRILDVLVSH---RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQA 199

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           FC    +S +   F + +    +P   +Y  +I G+CR+G +  A++    M + G VPD
Sbjct: 200 FCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD 259

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD 625
            ++Y TL++ LC++++L EA  L   M  KG  P  V   T+   +C+ D    A  +LD
Sbjct: 260 RLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLD 319



 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 1/168 (0%)

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK-RMSESEMFFEEA 522
           +  LI  + +    ++ L+ F KM +    P       ++ V    +  + ++   F+ +
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
              G +P  R+Y  ++  +C   +L++A + F +M +   VPD  +Y  LI G C++ ++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           + A  L D M+ KG +P  ++  TL    C+      A  +L R++ K
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLK 289


>AT1G73400.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:27598106-27599812 FORWARD
           LENGTH=568
          Length = 568

 Score =  135 bits (339), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 144/311 (46%), Gaps = 7/311 (2%)

Query: 252 SFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM 311
           +F +++   C+ G          +     +KP+   F  +  G C+    K+A ++LEEM
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294

Query: 312 VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVR--SENNKPNVLTYTAMINGYCRD 369
           +  G KP  +T+ A ID  C+ G  ++A  LF  ++   S  + P   T+  MI    ++
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354

Query: 370 DKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTY 429
           DK      L+GRM   G +P+ +TY  +I+G C A   + A+  ++ MS +G+ P+I TY
Sbjct: 355 DKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 414

Query: 430 NAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAK 489
           N  +  LC+  +  EA K+      +       TYN+LIS   +  D   A   +++M K
Sbjct: 415 NCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDK 474

Query: 490 SGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTM 549
                D+ +Y  +I       R  E+    EE V  G     R + S +      GNL  
Sbjct: 475 RDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNL-- 532

Query: 550 AIKFFHRMSDH 560
             K  H++S+H
Sbjct: 533 --KAIHKVSEH 541



 Score =  120 bits (301), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 140/295 (47%), Gaps = 8/295 (2%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
           P     N+++   C+ GLV   + L   M  R V PD+ ++ V+   +C++ +  +A K 
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKL 290

Query: 238 LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK---PNLINFTSMIEG 294
           L  M++ G   +N ++   I  FC+ G    A   F      G     P    F  MI  
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
           L K    ++ FE++  M+  G  P+V T+  +I+G+C     ++A++ FL  + ++   P
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYK-FLDEMSNKGYPP 409

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           +++TY   +   C + K + A  L GRM E    P+  TY  LI    +  + + AF+  
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILIS 469
             M +     ++ TY A+++GL    R +EA  +L++  + GL   K+ Y +  S
Sbjct: 470 TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL---KLPYRVFDS 521



 Score =  119 bits (299), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 168/390 (43%), Gaps = 52/390 (13%)

Query: 223 VAYCKMGNVLEADKW----LSVMLDR-GFLVDNASFTLIISEFCE--KGFATRALRYFHK 275
           +AY +M ++L + K+      +++D   ++  N    +++    E  + +  R L +  K
Sbjct: 160 IAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQK 219

Query: 276 FSD-----MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           F+      +  +P +  F  +++ LCK G +K+   +L  M     KP+  T   L  G 
Sbjct: 220 FAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGW 278

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI-- 388
           C+    +KA +L  +++ +  +KP   TY A I+ +C+   ++ A  L   M  +G    
Sbjct: 279 CRVRDPKKAMKLLEEMIEA-GHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVS 337

Query: 389 -PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            P   T+  +I    K    E  F+L+  M   G  P++ TY  +++G+C   +V EAYK
Sbjct: 338 APTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYK 397

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
            L +  + G   D VTYN  +   C+     +AL L+ +M +S   P + +Y  LI+   
Sbjct: 398 FLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS--- 454

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
                    MFFE     G                       A   +  M    CV D  
Sbjct: 455 ---------MFFEMDDPDG-----------------------AFNTWTEMDKRDCVQDVE 482

Query: 568 AYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
            Y  +I+GL    +  EA  L + ++ KGL
Sbjct: 483 TYCAMINGLFDCHRAKEACFLLEEVVNKGL 512



 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 135/328 (41%), Gaps = 18/328 (5%)

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVR--SENNKPNVLT--YTAMINGYCRD-----DKLN 373
           +  +ID L    +  K FR+ + ++     NNK  VL      ++  YC        K  
Sbjct: 162 YNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFA 221

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
           + + +  R+K Q   P  N +  L+D  CK G  +    L+  M R    P+  T+N + 
Sbjct: 222 KRKRI--RVKTQ---PEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLF 275

Query: 434 DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ 493
            G C+    ++A K+L++    G + +  TY   I   C+   + +A  LF  M   G  
Sbjct: 276 FGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSA 335

Query: 494 ---PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
              P   ++  +I    +  +  E        +  G +P   TY  +I G C    +  A
Sbjct: 336 VSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEA 395

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
            KF   MS+ G  PD + Y   +  LC+  K DEA  LY  M+E    P   T   L   
Sbjct: 396 YKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISM 455

Query: 611 YCKIDDCCSAMVILDRLEKKLWIRTATT 638
           + ++DD   A      ++K+  ++   T
Sbjct: 456 FFEMDDPDGAFNTWTEMDKRDCVQDVET 483



 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 162 KEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG---VHPDSASY 218
           K+A++++ EM   G  P   T    +   C+ G+VD A  LF+ M  +G     P + ++
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
            +M+VA  K     E  + +  M+  G L D +++  +I   C       A ++  + S+
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
            G  P+++ +   +  LC+     +A ++   MV     P+V T+  LI    +    + 
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 464

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           AF  + ++ + +  + +V TY AMING     +   A  LL  +  +GL      + + +
Sbjct: 465 AFNTWTEMDKRDCVQ-DVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523

Query: 399 DGHCKAGNFE 408
               + GN +
Sbjct: 524 MRLSEVGNLK 533



 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 75/167 (44%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+ + A+  + +E  E++  M + G +P+  T   V++  C    VD A    +EMS +G
Sbjct: 347 MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG 406

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD  +Y   +   C+     EA K    M++        ++ ++IS F E      A 
Sbjct: 407 YPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAF 466

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
             + +        ++  + +MI GL      K+A  +LEE+V +G K
Sbjct: 467 NTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLK 513


>AT5G25630.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:8947426-8949424 FORWARD
           LENGTH=599
          Length = 599

 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/457 (22%), Positives = 202/457 (44%), Gaps = 34/457 (7%)

Query: 186 VMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRG 245
           +M +  E G    AQ +F+ ++  G  P   SY  ++ A             +S +   G
Sbjct: 51  LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110

Query: 246 FLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAF 305
             +D+  F  +I+ F E G    A++   K  ++GL P    + ++I+G    G  +++ 
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170

Query: 306 EMLEEMVCQG---WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM 362
           E+L+ M+ +G     PN+ T   L+   CKK   E+A+ +  K+      +P+ +TY  +
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEEC-GVRPDTVTYNTI 229

Query: 363 INGYCRDDKLNRAEMLLGR---MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
              Y +  +  RAE  +     MKE+   PN  T   ++ G+C+ G        +  M  
Sbjct: 230 ATCYVQKGETVRAESEVVEKMVMKEKAK-PNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288

Query: 420 EGFSPNICTYNAIVDGLC----KKGRVQEAYKMLKDGFHNGLE----------------- 458
                N+  +N++++G      + G  +    +L   F+  +E                 
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKE 348

Query: 459 ----ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
               AD +TY+ +++       +++A  +F +M K+G++PD H+Y+ L   + R K   +
Sbjct: 349 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKK 408

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
           +E   E  +     P    +T++I G+C  G++  A++ F++M   G  P+   + TL+ 
Sbjct: 409 AEELLETLI-VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMW 467

Query: 575 GLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEY 611
           G  +  +  +A  +   M   G+ P   T + LA  +
Sbjct: 468 GYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 504



 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 193/420 (45%), Gaps = 35/420 (8%)

Query: 289 TSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL-CKKGWTEKAFRLFLKLV 347
           T ++  L +RG   +A  + + +   G +P++ ++T L+  +  +K +   +    +  V
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYG--SISSIVSEV 106

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
                K + + + A+IN +     +  A   L +MKE GL P T+TY TLI G+  AG  
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166

Query: 408 ERAFDLMNLMSREG---FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           ER+ +L++LM  EG     PNI T+N +V   CKK +V+EA++++K     G+  D VTY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226

Query: 465 NILISEHCKQADIKQALA-LFSKMA-KSGIQPDIHSYTTLIAVFCREKRMSES------- 515
           N + + + ++ +  +A + +  KM  K   +P+  +   ++  +CRE R+ +        
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286

Query: 516 -EMFFE------EAVRFGFIPT-------KRTYTSMICGYCRE----GNLTMAIKFFHRM 557
            EM  E       ++  GF+         + T T ++  +  E    GN  M ++    M
Sbjct: 287 KEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLM 346

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDC 617
            +     D I Y T+++       +++A  ++  M++ G+ P       LA  Y +  + 
Sbjct: 347 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 406

Query: 618 CSAMVILDRL--EKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
             A  +L+ L  E +  +   TT++   CS   +  A   F+K+       N  T    M
Sbjct: 407 KKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 466



 Score =  110 bits (275), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 168/348 (48%), Gaps = 36/348 (10%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R  E ++++ E  N  + PN +T N++++  C+   V+ A  + ++M   GV PD+ +Y 
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT-----LIISEFCEKGFATRALRYFH 274
            +   Y + G  + A+   S ++++  + + A        +++  +C +G     LR+  
Sbjct: 228 TIATCYVQKGETVRAE---SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284

Query: 275 KFSDMGLKPNLINFTSMIEGLCK-------------------------RGSIKQAFEMLE 309
           +  +M ++ NL+ F S+I G  +                          G+ K   ++L 
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLT 344

Query: 310 EMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRD 369
            M     K +V T++ +++     G+ EKA ++F ++V++   KP+   Y+ +  GY R 
Sbjct: 345 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKA-GVKPDAHAYSILAKGYVRA 403

Query: 370 DKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTY 429
            +  +AE LL  +  +   PN   +TT+I G C  G+ + A  + N M + G SPNI T+
Sbjct: 404 KEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 462

Query: 430 NAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
             ++ G  +  +  +A ++L+     G++ +  T+ +L++E  + A +
Sbjct: 463 ETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF-LLLAEAWRVAGL 509



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/340 (21%), Positives = 160/340 (47%), Gaps = 29/340 (8%)

Query: 137 GNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLV 196
           GN ++         +V+++ +  +++EA E+V +M   G+ P+T T N +     + G  
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239

Query: 197 DYAQY-LFEEMSAR-GVHPDSASYRVMVVAYCKMGNVLEADKWLSVM------------- 241
             A+  + E+M  +    P+  +  ++V  YC+ G V +  +++  M             
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299

Query: 242 -LDRGFL-------VDNASFTLIISEFCEK----GFATRALRYFHKFSDMGLKPNLINFT 289
            L  GF+       +D  + TL++  F E+    G     ++      +  +K ++I ++
Sbjct: 300 SLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYS 359

Query: 290 SMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
           +++      G +++A ++ +EMV  G KP+ + ++ L  G  +    +KA  L   L+  
Sbjct: 360 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE 419

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
             ++PNV+ +T +I+G+C +  ++ A  +  +M + G+ PN  T+ TL+ G+ +     +
Sbjct: 420 --SRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWK 477

Query: 410 AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           A +++ +M   G  P   T+  + +     G   E+ K +
Sbjct: 478 AEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAI 517



 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 114/263 (43%), Gaps = 40/263 (15%)

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL------------------ 397
           V + T ++N      + + A+ +   + E G  P+  +YTTL                  
Sbjct: 45  VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104

Query: 398 -----------------IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
                            I+   ++GN E A   +  M   G +P   TYN ++ G    G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164

Query: 441 RVQEAYKMLKDGFHNG---LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIH 497
           + + + ++L      G   +  +  T+N+L+   CK+  +++A  +  KM + G++PD  
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224

Query: 498 SYTTLIAVFCR--EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
           +Y T+   + +  E   +ESE+  +  ++    P  RT   ++ GYCREG +   ++F  
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284

Query: 556 RMSDHGCVPDSIAYGTLISGLCK 578
           RM +     + + + +LI+G  +
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVE 307


>AT2G37230.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:15637177-15639450 REVERSE
           LENGTH=757
          Length = 757

 Score =  134 bits (337), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/499 (22%), Positives = 202/499 (40%), Gaps = 31/499 (6%)

Query: 108 ALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEM 167
           AL FF W       RH                      +    M++   E+ +L  A  +
Sbjct: 133 ALQFFRWTERSGLIRH--------------------DRDTHMKMIKMLGEVSKLNHARCI 172

Query: 168 VFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCK 227
           + +M  +G+  +     ++++   + G+V  +  +F++M   GV     SY  +     +
Sbjct: 173 LLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILR 232

Query: 228 MGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLIN 287
            G  + A ++ + M+  G      ++ L++  F        ALR+F      G+ P+   
Sbjct: 233 RGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDAT 292

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           F +MI G C+   + +A ++  EM      P+V ++T +I G       +   R+F ++ 
Sbjct: 293 FNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEM- 351

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT-YTTLIDGHCKAGN 406
           RS   +PN  TY+ ++ G C   K+  A+ +L  M  + + P  N+ +  L+    KAG+
Sbjct: 352 RSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGD 411

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD--------GFHNGLE 458
              A +++  M+          Y  +++  CK      A K+L             + LE
Sbjct: 412 MAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLE 471

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            +   YN +I   C      +A  LF ++ K G+Q D  +   LI    +E     S   
Sbjct: 472 MEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEI 530

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
            +   R G       Y  +I  Y  +G    A      M + G VPDS  + ++I  L +
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFE 590

Query: 579 QSKLDEARGLYDSMIEKGL 597
             ++  A  +   MI+K +
Sbjct: 591 DGRVQTASRVMMIMIDKNV 609



 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 155/344 (45%), Gaps = 17/344 (4%)

Query: 297 KRGSIKQAFEMLEEMVCQ-----GWKPNV----------YTHTALIDGLCKKGWTEKAFR 341
           +RG  +Q  E LE+ +C+      W   +          + H+ + + L      E A +
Sbjct: 77  QRGK-RQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQ 135

Query: 342 LFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGH 401
            F    RS   + +  T+  MI       KLN A  +L  M E+G+  + + +  LI+ +
Sbjct: 136 FFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESY 195

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
            KAG  + +  +   M   G    I +YN++   + ++GR   A +        G+E  +
Sbjct: 196 GKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTR 255

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
            TYN+++        ++ AL  F  M   GI PD  ++ T+I  FCR K+M E+E  F E
Sbjct: 256 HTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVE 315

Query: 522 AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
                  P+  +YT+MI GY     +   ++ F  M   G  P++  Y TL+ GLC   K
Sbjct: 316 MKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGK 375

Query: 582 LDEARGLYDSMIEKGLIPCEVTR-ITLAYEYCKIDDCCSAMVIL 624
           + EA+ +  +M+ K + P + +  + L     K  D  +A  +L
Sbjct: 376 MVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVL 419



 Score =  102 bits (255), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 153/334 (45%), Gaps = 7/334 (2%)

Query: 269 ALRYFHKFSDMGL-KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG--WKPNVYTHTA 325
           AL++F      GL + +      MI+ L +   +  A  +L +M  +G  W  +++    
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFV--V 190

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LI+   K G  +++ ++F K+ +    +  + +Y ++     R  +   A+    +M  +
Sbjct: 191 LIESYGKAGIVQESVKIFQKM-KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE 249

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           G+ P  +TY  ++ G   +   E A      M   G SP+  T+N +++G C+  ++ EA
Sbjct: 250 GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEA 309

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            K+  +   N +    V+Y  +I  +     +   L +F +M  SGI+P+  +Y+TL+  
Sbjct: 310 EKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPG 369

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRT-YTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
            C   +M E++   +  +     P   + +  ++    + G++  A +    M+      
Sbjct: 370 LCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPA 429

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
           ++  YG LI   CK S  + A  L D++IEK +I
Sbjct: 430 EAGHYGVLIENQCKASAYNRAIKLLDTLIEKEII 463



 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 4/250 (1%)

Query: 404 AGNFERAFDLMNLMSREGF-SPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           A   E A        R G    +  T+  ++  L +  ++  A  +L D    G+  D+ 
Sbjct: 127 AKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDED 186

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
            + +LI  + K   +++++ +F KM   G++  I SY +L  V  R  R   ++ +F + 
Sbjct: 187 MFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKM 246

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
           V  G  PT+ TY  M+ G+     L  A++FF  M   G  PD   + T+I+G C+  K+
Sbjct: 247 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM 306

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTAT---TL 639
           DEA  L+  M    + P  V+  T+   Y  +D     + I + +        AT   TL
Sbjct: 307 DEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 366

Query: 640 VRKLCSERKV 649
           +  LC   K+
Sbjct: 367 LPGLCDAGKM 376



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/450 (18%), Positives = 171/450 (38%), Gaps = 86/450 (19%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
            M+  F    ++ EA ++  EM    + P+  +   ++K    +  VD    +FEEM + 
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSS 354

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLV-DNASFTLIISEFCEKGFATR 268
           G+ P++ +Y  ++   C  G ++EA   L  M+ +     DN+ F  ++    + G    
Sbjct: 355 GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAA 414

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG----------WKP 318
           A       + + +     ++  +IE  CK  +  +A ++L+ ++ +            +P
Sbjct: 415 ATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP 474

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT-------------------- 358
           + Y    +I+ LC  G T KA  LF +L++      + L                     
Sbjct: 475 SAYN--PIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILK 532

Query: 359 -------------YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI-----DG 400
                        Y  +I  Y    +   A+  L  M E G +P+++ + ++I     DG
Sbjct: 533 IMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDG 592

Query: 401 HCKA--------------------------------GNFERAFDLMNLMSREGFSPNICT 428
             +                                 G+ E A   ++L+++ G + ++  
Sbjct: 593 RVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADL-- 650

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
            ++++  L +KG+   A K+L  G    L  +  +Y+ ++           A ++  K+ 
Sbjct: 651 -DSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIM 709

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
           + G   D  S   LI    +E    ++++ 
Sbjct: 710 EKGSSTDWKSSDELIKSLNQEGNTKQADVL 739


>AT3G60050.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:22180231-22181652 REVERSE
           LENGTH=473
          Length = 473

 Score =  132 bits (332), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 142/305 (46%), Gaps = 5/305 (1%)

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
           G  K  + +++EMV  G+     T   LI    + G  ++A   F+K  ++ N +P   +
Sbjct: 163 GEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMK-SKTFNYRPFKHS 221

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y A++N      +    E +  +M E G  P+  TY  L+  + + G  +R   L + M+
Sbjct: 222 YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMA 281

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
           R+GFSP+  TYN ++  L K  +   A   L      G++   + Y  LI    +  +++
Sbjct: 282 RDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE 341

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
                  +M K+G +PD+  YT +I  +     + +++  F E    G +P   TY SMI
Sbjct: 342 ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG-- 596
            G C  G    A      M   GC P+ + Y TL+S L K  KL EAR +   M++KG  
Sbjct: 402 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHY 461

Query: 597 --LIP 599
             L+P
Sbjct: 462 VHLVP 466



 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 150/331 (45%), Gaps = 18/331 (5%)

Query: 107 VALSFFHWAIGYSRFRH-------FMRLYIVCAT---------SLIGNGNLQKAHEVMQC 150
           +A  FF W+     FRH        M+++  C            ++ +G           
Sbjct: 131 LAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDG-FPTTARTFNL 189

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ S  E G  K+AV    +       P   + N ++     +      ++++++M   G
Sbjct: 190 LICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDG 249

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD  +Y +++    ++G +   D+    M   GF  D+ ++ +++    +      AL
Sbjct: 250 FSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAAL 309

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
              +   ++G+ P+++++T++I+GL + G+++     L+EMV  G +P+V  +T +I G 
Sbjct: 310 TTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
              G  +KA  +F ++   +   PNV TY +MI G C   +   A  LL  M+ +G  PN
Sbjct: 370 VVSGELDKAKEMFREMT-VKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
              Y+TL+    KAG    A  ++  M ++G
Sbjct: 429 FVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459



 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 115/236 (48%), Gaps = 8/236 (3%)

Query: 165 VEMVF-EMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
           +E V+ +M   G  P+  T N+++     +G +D    LF+EM+  G  PDS +Y +++ 
Sbjct: 238 IEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLH 297

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYF-HKFSDMGLK 282
              K    L A   L+ M + G       +T +I      G    A +YF  +    G +
Sbjct: 298 ILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAG-NLEACKYFLDEMVKAGCR 356

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           P+++ +T MI G    G + +A EM  EM  +G  PNV+T+ ++I GLC  G   +A  L
Sbjct: 357 PDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWL 416

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG----LIPNTNTY 394
            LK + S    PN + Y+ +++   +  KL+ A  ++  M ++G    L+P    Y
Sbjct: 417 -LKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471



 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 35/275 (12%)

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV-----DGLCKKGRVQ-- 443
            N+Y  L+    + G ++  + L++ M ++GF     T+N ++      GL K+  VQ  
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208

Query: 444 ------------------------EAYKML----KDGFHNGLEADKVTYNILISEHCKQA 475
                                   + YK++    K    +G   D +TYNIL+  + +  
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG 268

Query: 476 DIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYT 535
            + +   LF +MA+ G  PD ++Y  L+ +  +  +   +          G  P+   YT
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328

Query: 536 SMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
           ++I G  R GNL     F   M   GC PD + Y  +I+G     +LD+A+ ++  M  K
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388

Query: 596 GLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           G +P   T  ++    C   +   A  +L  +E +
Sbjct: 389 GQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESR 423



 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 2/190 (1%)

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI- 477
           +E F   + +Y+ ++    + G  +  ++++ +   +G      T+N+LI   C +A + 
Sbjct: 142 QECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICS-CGEAGLA 200

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
           KQA+  F K      +P  HSY  ++      K+    E  +++ +  GF P   TY  +
Sbjct: 201 KQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNIL 260

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
           +    R G +    + F  M+  G  PDS  Y  L+  L K +K   A    + M E G+
Sbjct: 261 LWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGI 320

Query: 598 IPCEVTRITL 607
            P  +   TL
Sbjct: 321 DPSVLHYTTL 330



 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+  +   G L +A EM  EM  +G +PN  T N +++  C  G    A +L +EM +RG
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLV 248
            +P+   Y  +V    K G + EA K +  M+ +G  V
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYV 462


>AT1G71060.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:26805651-26807183 REVERSE
           LENGTH=510
          Length = 510

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 171/387 (44%), Gaps = 44/387 (11%)

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
           L+   +F LI   +        A+  FHK  + G K    +F  M++ L K  ++  A +
Sbjct: 159 LLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQK 218

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           + ++M                         +K F            +P++ +YT ++ G+
Sbjct: 219 VFDKM------------------------KKKRF------------EPDIKSYTILLEGW 242

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
            ++  L R + +   MK++G  P+   Y  +I+ HCKA  +E A    N M +    P+ 
Sbjct: 243 GQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSP 302

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK 486
             + ++++GL  + ++ +A +  +    +G   +  TYN L+  +C    ++ A     +
Sbjct: 303 HIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDE 362

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           M   G+ P+  +Y  ++    R +R  E+   +E        PT  TY  M+  +C +  
Sbjct: 363 MRLKGVGPNARTYDIILHHLIRMQRSKEA---YEVYQTMSCEPTVSTYEIMVRMFCNKER 419

Query: 547 LTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC----EV 602
           L MAIK +  M   G +P    + +LI+ LC ++KLDEA   ++ M++ G+ P       
Sbjct: 420 LDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSR 479

Query: 603 TRITLAYEYCKIDDCCSAMVILDRLEK 629
            + TL  E  K D     +V +DRL K
Sbjct: 480 LKQTLLDEGRK-DKVTDLVVKMDRLRK 505



 Score =  120 bits (302), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 186/411 (45%), Gaps = 48/411 (11%)

Query: 285 LINFT-SMIEGLCKRGSIKQAFEMLEEMV-------------------CQGWKPNVYTHT 324
           L  FT S +E L    S+K +  ++EE++                    +G+K     + 
Sbjct: 73  LTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYN 132

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVRSENNKP--NVLTYTAMINGYCRDDKLNRAEMLLGRM 382
           ALI+ L K     K F+L   LV     K   +  T+  +   Y R  K+  A     +M
Sbjct: 133 ALIESLGKI----KQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKM 188

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG-- 440
           +E G    ++ +  ++D   K+ N   A  + + M ++ F P+I +Y  +++G  ++   
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248

Query: 441 -RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
            RV E  + +KD    G E D V Y I+I+ HCK    ++A+  F++M +   +P  H +
Sbjct: 249 LRVDEVNREMKD---EGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIF 305

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
            +LI     EK+++++  FFE +   GF     TY +++  YC    +  A K    M  
Sbjct: 306 CSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRL 365

Query: 560 HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE-----YCKI 614
            G  P++  Y  ++  L +  +  EA  +Y +M       CE T  T  YE     +C  
Sbjct: 366 KGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM------SCEPTVST--YEIMVRMFCNK 417

Query: 615 DDCCSAMVILDRLEKK---LWIRTATTLVRKLCSERKVGMAALFFHKLLDM 662
           +    A+ I D ++ K     +   ++L+  LC E K+  A  +F+++LD+
Sbjct: 418 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDV 468



 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 160/394 (40%), Gaps = 46/394 (11%)

Query: 93  VTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSL------------IGNGN 140
           +  V     NAG ++ALS F WA     F+H    Y     SL            + +  
Sbjct: 97  IEEVLKKLSNAG-VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMK 155

Query: 141 LQK--AHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
            +K  + E    + R +A   ++KEA+    +M   G    +   N ++    +   V  
Sbjct: 156 AKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGD 215

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
           AQ +F++M  +   PD  SY +++  + +  N+L  D+    M D GF  D  ++ +II+
Sbjct: 216 AQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIIN 275

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
             C+      A+R+F++      KP+   F S+I GL     +  A E  E     G+  
Sbjct: 276 AHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPL 335

Query: 319 NVYTHTALIDGLCKKGWTEKAFR-------------------LFLKLVRSENNK------ 353
              T+ AL+   C     E A++                   +   L+R + +K      
Sbjct: 336 EAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVY 395

Query: 354 ------PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
                 P V TY  M+  +C  ++L+ A  +   MK +G++P  + +++LI   C     
Sbjct: 396 QTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKL 455

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
           + A +  N M   G  P    ++ +   L  +GR
Sbjct: 456 DEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGR 489



 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 91/209 (43%), Gaps = 3/209 (1%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
           N + +  +   ++       +L +A+E      + G      T N ++   C    ++ A
Sbjct: 297 NCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDA 356

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
               +EM  +GV P++ +Y +++    +M    EA +    M     +   +++ +++  
Sbjct: 357 YKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTV---STYEIMVRM 413

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
           FC K     A++ + +    G+ P +  F+S+I  LC    + +A E   EM+  G +P 
Sbjct: 414 FCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPP 473

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVR 348
            +  + L   L  +G  +K   L +K+ R
Sbjct: 474 GHMFSRLKQTLLDEGRKDKVTDLVVKMDR 502


>AT3G23020.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:8177215-8179743 REVERSE
           LENGTH=842
          Length = 842

 Score =  130 bits (327), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/501 (21%), Positives = 220/501 (43%), Gaps = 17/501 (3%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+  +   G+L E   ++  M      P+T+T N+++ +  +   ++ A   F+EM   G
Sbjct: 339 MIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDG 397

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD  SYR ++ A+     V EA+  ++ M D    +D  + + +   + E     ++ 
Sbjct: 398 LKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSW 457

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW-KPNVYTHTALIDG 329
            +F +F   G   +   +++ I+   +RG + +A  +   + CQ   K  V  +  +I  
Sbjct: 458 SWFKRFHVAG-NMSSEGYSANIDAYGERGYLSEAERVF--ICCQEVNKRTVIEYNVMIKA 514

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
                  EKA  LF  ++ S    P+  TY  ++      D  ++    L +M+E G + 
Sbjct: 515 YGISKSCEKACELFESMM-SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVS 573

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           +   Y  +I    K G    A ++   M      P++  Y  +++     G VQ+A   +
Sbjct: 574 DCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYV 633

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ---PDIHSYTTLIAVF 506
           +     G+  + V YN LI  + K   + +A A++ K+ +S  +   PD+++   +I ++
Sbjct: 634 EAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLY 693

Query: 507 CREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS 566
                + ++E  F+   + G    + T+  M+C Y + G    A +   +M +   + D 
Sbjct: 694 SERSMVRKAEAIFDSMKQRGE-ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDP 752

Query: 567 IAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDR 626
           ++Y +++       +  EA   +  M+  G+ P + T  +L     K+     A+  ++ 
Sbjct: 753 LSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEE 812

Query: 627 LEKK-------LWIRTATTLV 640
           + KK       LWI T ++LV
Sbjct: 813 IRKKEIKRGLELWISTLSSLV 833



 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/496 (22%), Positives = 206/496 (41%), Gaps = 67/496 (13%)

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
           N++++I  +     Y Q L++EM  +G+ P +++Y  ++  Y K G  + A  WL  M  
Sbjct: 191 NIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSK 250

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFS------DMGLKPNLINFTSMIEGLCK 297
            G   D  +  +++  + +     +A  +F K+S      D  +  +   + +MI+   K
Sbjct: 251 IGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGK 310

Query: 298 RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF--LKLVRSENNKPN 355
            G IK+A E  + M+ +G  P   T   +I      G   +   L   +KL    +  P+
Sbjct: 311 SGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKL----HCAPD 366

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL------------------ 397
             TY  +I+ + +++ + RA      MK+ GL P+  +Y TL                  
Sbjct: 367 TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426

Query: 398 --------IDGHC---------------KAGNFERAFDLMNLMSREGFSPNICTYNAIVD 434
                   ID +                K+ ++ + F +   MS EG+S NI       D
Sbjct: 427 EMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI-------D 479

Query: 435 GLCKKGRVQEAYKMLKDGFHNGLEADKVT---YNILISEHCKQADIKQALALFSKMAKSG 491
              ++G + EA ++    F    E +K T   YN++I  +      ++A  LF  M   G
Sbjct: 480 AYGERGYLSEAERV----FICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYG 535

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
           + PD  +Y TL+ +        +   + E+    G++     Y ++I  + + G L MA 
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595

Query: 552 KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEY 611
           + +  M ++   PD + YG LI+       + +A    ++M E G+    V   +L   Y
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655

Query: 612 CKIDDCCSAMVILDRL 627
            K+     A  I  +L
Sbjct: 656 TKVGYLDEAEAIYRKL 671



 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           NV+ Y  M+    +  K    + L   M  +G+ P  +TY TLID + K G    A   +
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGR-VQEAYKMLKDGFHNGLEAD------KVTYNIL 467
             MS+ G  P+  T   IV  + KK R  Q+A +  K    +  +AD        TYN +
Sbjct: 246 GKMSKIGMQPDEVT-TGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTM 304

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           I  + K   IK+A   F +M + GI P   ++ T+I ++    ++ E      + ++   
Sbjct: 305 IDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM-KTMKLHC 363

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
            P  RTY  +I  + +  ++  A  +F  M D G  PD ++Y TL+     +  ++EA G
Sbjct: 364 APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEG 423

Query: 588 LYDSMIEKGLIPCEVTRITLAYEYCKID 615
           L   M +  +   E T+  L   Y + +
Sbjct: 424 LIAEMDDDNVEIDEYTQSALTRMYVEAE 451



 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 138/317 (43%), Gaps = 17/317 (5%)

Query: 268 RALRYFHKFSDMG-LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
           RA+  F  F   G  + N+I++  M+  L K    +    + +EM+ +G KP   T+  L
Sbjct: 169 RAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTL 228

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK--- 383
           ID   K G    A     K+ +    +P+ +T   ++  Y +  +  +AE    +     
Sbjct: 229 IDVYSKGGLKVHALCWLGKMSKI-GMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287

Query: 384 ---EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
              +  +  ++ TY T+ID + K+G  + A +    M  EG  P   T+N ++      G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347

Query: 441 RVQEAYKMLKD-GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
           ++ E   ++K    H     D  TYNILIS H K  DI++A A F +M   G++PD  SY
Sbjct: 348 QLGEVTSLMKTMKLH--CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSY 405

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR--- 556
            TL+  F     + E+E    E         + T +++   Y     L  +  +F R   
Sbjct: 406 RTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHV 465

Query: 557 ---MSDHGCVPDSIAYG 570
              MS  G   +  AYG
Sbjct: 466 AGNMSSEGYSANIDAYG 482



 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 43/248 (17%)

Query: 406 NFERAFDLMNLMSREG-FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           ++ERA ++      +G +  N+  YN ++  L K  + +    +  +    G++    TY
Sbjct: 166 HWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTY 225

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPD----------------------------- 495
             LI  + K      AL    KM+K G+QPD                             
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSC 285

Query: 496 ------------IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCR 543
                        ++Y T+I  + +  ++ E+   F+  +  G +PT  T+ +MI  Y  
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345

Query: 544 EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
            G L         M  H C PD+  Y  LIS   K + ++ A   +  M + GL P  V+
Sbjct: 346 NGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVS 404

Query: 604 RITLAYEY 611
             TL Y +
Sbjct: 405 YRTLLYAF 412


>AT3G62470.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:23106600-23108399 REVERSE
           LENGTH=599
          Length = 599

 Score =  130 bits (326), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 201/451 (44%), Gaps = 25/451 (5%)

Query: 54  VDRVCALVCDSFHQHTHMRVSPPRLHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFFH 113
           V+RVC ++ + F    +M      + L      L+H+  V  +           A  FF 
Sbjct: 131 VERVCKVIDELFALDRNMEAVLDEMKLD-----LSHDLIVEVLERF--RHARKPAFRFFC 183

Query: 114 WAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCM--------------VRSFAEIG 159
           WA     F H  R Y    + L      +    V++ M              +++FA   
Sbjct: 184 WAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAK 243

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
             K+AV +   M         +T+N ++       L   AQ LF+++  R   P+  +Y 
Sbjct: 244 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYT 302

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           V++  +C++ N++EA +  + M+D+G   D  +  +++         + A++ FH     
Sbjct: 303 VLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSK 362

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G  PN+ ++T MI   CK+ S++ A E  ++MV  G +P+   +T LI G   +   +  
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           + L LK ++ + + P+  TY A+I           A  +  +M +  + P+ +T+  ++ 
Sbjct: 423 YEL-LKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK 481

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
            +  A N+E    +   M ++G  P+  +Y  ++ GL  +G+ +EA + L++    G++ 
Sbjct: 482 SYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKT 541

Query: 460 DKVTYNILISEHCK--QADIKQALALFSKMA 488
             + YN   ++  +  Q +I + LA  +K +
Sbjct: 542 PLIDYNKFAADFHRGGQPEIFEELAQRAKFS 572



 Score =  129 bits (325), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 166/373 (44%), Gaps = 3/373 (0%)

Query: 174 QGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLE 233
           QG   +++T N +M I  +    +    + EEM  +G+     ++ + + A+       +
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 247

Query: 234 ADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIE 293
           A     +M    F +   +   ++           A   F K  +    PN++ +T ++ 
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLN 306

Query: 294 GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
           G C+  ++ +A  +  +M+ QG KP++  H  +++GL +      A +LF  +++S+   
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF-HVMKSKGPC 365

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           PNV +YT MI  +C+   +  A      M + GL P+   YT LI G       +  ++L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
           +  M  +G  P+  TYNA++  +  +   + A ++      N +E    T+N+++  +  
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 485

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
             + +   A++ +M K GI PD +SYT LI     E +  E+  + EE +  G       
Sbjct: 486 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLID 545

Query: 534 YTSMICGYCREGN 546
           Y      + R G 
Sbjct: 546 YNKFAADFHRGGQ 558



 Score =  127 bits (319), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 160/361 (44%), Gaps = 3/361 (0%)

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
           +G   DS +Y  M+    K          L  M  +G L    +FT+ +  F       +
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 247

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A+  F        K  +     +++ L  R  + +  ++L + + + + PN+ T+T L++
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 306

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
           G C+     +A R++  ++  +  KP+++ +  M+ G  R  K + A  L   MK +G  
Sbjct: 307 GWCRVRNLIEAARIWNDMI-DQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           PN  +YT +I   CK  + E A +  + M   G  P+   Y  ++ G   + ++   Y++
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
           LK+    G   D  TYN LI     Q   + A  +++KM ++ I+P IH++  ++  +  
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 485

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
            +        +EE ++ G  P   +YT +I G   EG    A ++   M D G     I 
Sbjct: 486 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLID 545

Query: 569 Y 569
           Y
Sbjct: 546 Y 546



 Score =  127 bits (319), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 146/324 (45%), Gaps = 4/324 (1%)

Query: 276 FSDMGLKPNLI--NFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
             +MG K  L    FT  ++        K+A  + E M    +K  V T   L+D L + 
Sbjct: 218 LEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA 277

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
              ++A  LF KL   E   PN++TYT ++NG+CR   L  A  +   M +QGL P+   
Sbjct: 278 KLGKEAQVLFDKL--KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVA 335

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           +  +++G  ++     A  L ++M  +G  PN+ +Y  ++   CK+  ++ A +   D  
Sbjct: 336 HNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 395

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
            +GL+ D   Y  LI+    Q  +     L  +M + G  PD  +Y  LI +   +K   
Sbjct: 396 DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 455

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
            +   + + ++    P+  T+  ++  Y    N  M    +  M   G  PD  +Y  LI
Sbjct: 456 HATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLI 515

Query: 574 SGLCKQSKLDEARGLYDSMIEKGL 597
            GL  + K  EA    + M++KG+
Sbjct: 516 RGLIGEGKSREACRYLEEMLDKGM 539



 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/388 (22%), Positives = 161/388 (41%), Gaps = 16/388 (4%)

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP--NVLTYTAMINGYCRDDK 371
           QG+  +  T+ +++  L K     + F   + ++     K    + T+T  +  +    +
Sbjct: 189 QGFAHDSRTYNSMMSILAKT----RQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKE 244

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLID--GHCKAGNFERA-FDLMNLMSREGFSPNICT 428
             +A  +   MK+        T   L+D  G  K G   +  FD +    +E F+PN+ T
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL----KERFTPNMMT 300

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           Y  +++G C+   + EA ++  D    GL+ D V +N+++    +      A+ LF  M 
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMK 360

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
             G  P++ SYT +I  FC++  M  +  +F++ V  G  P    YT +I G+  +  L 
Sbjct: 361 SKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD 420

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
              +    M + G  PD   Y  LI  +  Q   + A  +Y+ MI+  + P   T   + 
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIM 480

Query: 609 YEYCKIDDCCSAMVILDRLEKKLWI---RTATTLVRKLCSERKVGMAALFFHKLLDMDFH 665
             Y    +      + + + KK       + T L+R L  E K   A  +  ++LD    
Sbjct: 481 KSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMK 540

Query: 666 VNRVTLAAFMTACYESNKYALVSDLSAR 693
              +    F    +   +  +  +L+ R
Sbjct: 541 TPLIDYNKFAADFHRGGQPEIFEELAQR 568



 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 2/209 (0%)

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
           R+GF+ +  TYN+++  L K  + +    +L++    GL   + T+ I +       + K
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERK 246

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
           +A+ +F  M K   +  + +   L+    R K   E+++ F++ ++  F P   TYT ++
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLL 305

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
            G+CR  NL  A + ++ M D G  PD +A+  ++ GL +  K  +A  L+  M  KG  
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365

Query: 599 PCEVTRITLAYEYCKIDDCCSAMVILDRL 627
           P   +   +  ++CK     +A+   D +
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDM 394


>AT3G62540.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:23133514-23135313 REVERSE
           LENGTH=599
          Length = 599

 Score =  129 bits (324), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/478 (21%), Positives = 211/478 (44%), Gaps = 26/478 (5%)

Query: 54  VDRVCALVCDSFHQHTHMRVSPPRLHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFFH 113
           V+RVC ++ + F    +M      + L      L+H+  V  +           A  FF 
Sbjct: 131 VERVCKVIDELFALDRNMEAVLDEMKLD-----LSHDLIVEVLERF--RHARKPAFRFFC 183

Query: 114 WAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCM--------------VRSFAEIG 159
           WA     F H  R Y    + L      +    V++ M              +++FA   
Sbjct: 184 WAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAK 243

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
             K+AV +   M         +T+N ++       L   AQ LF+++  R   P+  +Y 
Sbjct: 244 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYT 302

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           V++  +C++ N++EA +  + M+D G   D  +  +++         + A++ FH     
Sbjct: 303 VLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSK 362

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G  PN+ ++T MI   CK+ S++ A E  ++MV  G +P+   +T LI G   +   +  
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           + L LK ++ + + P+  TY A+I              +  +M +  + P+ +T+  ++ 
Sbjct: 423 YEL-LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 481

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
            +  A N+E    + + M ++G  P+  +Y  ++ GL  +G+ +EA + L++    G++ 
Sbjct: 482 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKT 541

Query: 460 DKVTYNILISEHCK--QADIKQALALFSKMAKSGIQPDIHS-YTTLIAVFCREKRMSE 514
             + YN   ++  +  Q +I + LA  +K +      +I + +  +    C+++ M +
Sbjct: 542 PLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQRFMED 599



 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 163/373 (43%), Gaps = 3/373 (0%)

Query: 174 QGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLE 233
           QG    ++T N +M I  +    +    + EEM  +G+     ++ + + A+       +
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 247

Query: 234 ADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIE 293
           A     +M    F +   +   ++           A   F K  +    PN++ +T ++ 
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLN 306

Query: 294 GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
           G C+  ++ +A  +  +M+  G KP++  H  +++GL +      A +LF  +++S+   
Sbjct: 307 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF-HVMKSKGPC 365

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           PNV +YT MI  +C+   +  A      M + GL P+   YT LI G       +  ++L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
           +  M  +G  P+  TYNA++  +  +   +   ++      N +E    T+N+++  +  
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 485

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
             + +   A++ +M K GI PD +SYT LI     E +  E+  + EE +  G       
Sbjct: 486 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 545

Query: 534 YTSMICGYCREGN 546
           Y      + R G 
Sbjct: 546 YNKFAADFHRGGQ 558



 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 144/324 (44%), Gaps = 4/324 (1%)

Query: 276 FSDMGLKPNLI--NFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
             +MG K  L    FT  ++        K+A  + E M    +K  V T   L+D L + 
Sbjct: 218 LEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA 277

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
              ++A  LF KL   E   PN++TYT ++NG+CR   L  A  +   M + GL P+   
Sbjct: 278 KLGKEAQVLFDKL--KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVA 335

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           +  +++G  ++     A  L ++M  +G  PN+ +Y  ++   CK+  ++ A +   D  
Sbjct: 336 HNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 395

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
            +GL+ D   Y  LI+    Q  +     L  +M + G  PD  +Y  LI +   +K   
Sbjct: 396 DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 455

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
                + + ++    P+  T+  ++  Y    N  M    +  M   G  PD  +Y  LI
Sbjct: 456 HGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLI 515

Query: 574 SGLCKQSKLDEARGLYDSMIEKGL 597
            GL  + K  EA    + M++KG+
Sbjct: 516 RGLISEGKSREACRYLEEMLDKGM 539



 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 146/323 (45%), Gaps = 2/323 (0%)

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
           L+   +FT+ +  F       +A+  F        K  +     +++ L  R  + +  +
Sbjct: 226 LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQ 284

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           +L + + + + PN+ T+T L++G C+     +A R++  ++     KP+++ +  M+ G 
Sbjct: 285 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI-DHGLKPDIVAHNVMLEGL 343

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
            R  K + A  L   MK +G  PN  +YT +I   CK  + E A +  + M   G  P+ 
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK 486
             Y  ++ G   + ++   Y++LK+    G   D  TYN LI     Q   +    +++K
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           M ++ I+P IH++  ++  +   +        ++E ++ G  P   +YT +I G   EG 
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523

Query: 547 LTMAIKFFHRMSDHGCVPDSIAY 569
              A ++   M D G     I Y
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDY 546



 Score =  108 bits (271), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 10/342 (2%)

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID--GHCKAGNFERA-FDLM 414
           T+T  +  +    +  +A  +   MK+        T   L+D  G  K G   +  FD +
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
               +E F+PN+ TY  +++G C+   + EA ++  D   +GL+ D V +N+++    + 
Sbjct: 291 ----KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS 346

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
                A+ LF  M   G  P++ SYT +I  FC++  M  +  +F++ V  G  P    Y
Sbjct: 347 MKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 406

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
           T +I G+  +  L    +    M + G  PD   Y  LI  +  Q   +    +Y+ MI+
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 466

Query: 595 KGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWI---RTATTLVRKLCSERKVGM 651
             + P   T   +   Y    +      + D + KK       + T L+R L SE K   
Sbjct: 467 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 526

Query: 652 AALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSAR 693
           A  +  ++LD       +    F    +   +  +  +L+ R
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568


>AT5G14820.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:4792072-4793868 REVERSE
           LENGTH=598
          Length = 598

 Score =  129 bits (323), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/478 (21%), Positives = 211/478 (44%), Gaps = 26/478 (5%)

Query: 54  VDRVCALVCDSFHQHTHMRVSPPRLHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFFH 113
           V+RVC ++ + F    +M      + L      L+H+  V  +           A  FF 
Sbjct: 130 VERVCKVIDELFALDRNMEAVLDEMKLD-----LSHDLIVEVLERF--RHARKPAFRFFC 182

Query: 114 WAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCM--------------VRSFAEIG 159
           WA     F H  R Y    + L      +    V++ M              +++FA   
Sbjct: 183 WAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAK 242

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
             K+AV +   M         +T+N ++       L   AQ LF+++  R   P+  +Y 
Sbjct: 243 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYT 301

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           V++  +C++ N++EA +  + M+D G   D  +  +++         + A++ FH     
Sbjct: 302 VLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSK 361

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G  PN+ ++T MI   CK+ S++ A E  ++MV  G +P+   +T LI G   +   +  
Sbjct: 362 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 421

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           + L LK ++ + + P+  TY A+I              +  +M +  + P+ +T+  ++ 
Sbjct: 422 YEL-LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 480

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
            +  A N+E    + + M ++G  P+  +Y  ++ GL  +G+ +EA + L++    G++ 
Sbjct: 481 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKT 540

Query: 460 DKVTYNILISEHCK--QADIKQALALFSKMAKSGIQPDIHS-YTTLIAVFCREKRMSE 514
             + YN   ++  +  Q +I + LA  +K +      +I + +  +    C+++ M +
Sbjct: 541 PLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQRFMED 598



 Score =  126 bits (317), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 164/373 (43%), Gaps = 3/373 (0%)

Query: 174 QGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLE 233
           QG   +++T N +M I  +    +    + EEM  +G+     ++ + + A+       +
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 246

Query: 234 ADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIE 293
           A     +M    F +   +   ++           A   F K  +    PN++ +T ++ 
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLN 305

Query: 294 GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
           G C+  ++ +A  +  +M+  G KP++  H  +++GL +      A +LF  +++S+   
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF-HVMKSKGPC 364

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           PNV +YT MI  +C+   +  A      M + GL P+   YT LI G       +  ++L
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
           +  M  +G  P+  TYNA++  +  +   +   ++      N +E    T+N+++  +  
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
             + +   A++ +M K GI PD +SYT LI     E +  E+  + EE +  G       
Sbjct: 485 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 544

Query: 534 YTSMICGYCREGN 546
           Y      + R G 
Sbjct: 545 YNKFAADFHRGGQ 557



 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 144/324 (44%), Gaps = 4/324 (1%)

Query: 276 FSDMGLKPNLI--NFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
             +MG K  L    FT  ++        K+A  + E M    +K  V T   L+D L + 
Sbjct: 217 LEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA 276

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
              ++A  LF KL   E   PN++TYT ++NG+CR   L  A  +   M + GL P+   
Sbjct: 277 KLGKEAQVLFDKL--KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVA 334

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           +  +++G  ++     A  L ++M  +G  PN+ +Y  ++   CK+  ++ A +   D  
Sbjct: 335 HNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 394

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
            +GL+ D   Y  LI+    Q  +     L  +M + G  PD  +Y  LI +   +K   
Sbjct: 395 DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 454

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
                + + ++    P+  T+  ++  Y    N  M    +  M   G  PD  +Y  LI
Sbjct: 455 HGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLI 514

Query: 574 SGLCKQSKLDEARGLYDSMIEKGL 597
            GL  + K  EA    + M++KG+
Sbjct: 515 RGLISEGKSREACRYLEEMLDKGM 538



 Score =  123 bits (309), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 158/361 (43%), Gaps = 3/361 (0%)

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
           +G   DS +Y  M+    K          L  M  +G L    +FT+ +  F       +
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 246

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A+  F        K  +     +++ L  R  + +  ++L + + + + PN+ T+T L++
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 305

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
           G C+     +A R++  ++     KP+++ +  M+ G  R  K + A  L   MK +G  
Sbjct: 306 GWCRVRNLIEAARIWNDMI-DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           PN  +YT +I   CK  + E A +  + M   G  P+   Y  ++ G   + ++   Y++
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
           LK+    G   D  TYN LI     Q   +    +++KM ++ I+P IH++  ++  +  
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
            +        ++E ++ G  P   +YT +I G   EG    A ++   M D G     I 
Sbjct: 485 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 544

Query: 569 Y 569
           Y
Sbjct: 545 Y 545



 Score =  108 bits (271), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 10/342 (2%)

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID--GHCKAGNFERA-FDLM 414
           T+T  +  +    +  +A  +   MK+        T   L+D  G  K G   +  FD +
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 289

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
               +E F+PN+ TY  +++G C+   + EA ++  D   +GL+ D V +N+++    + 
Sbjct: 290 ----KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS 345

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
                A+ LF  M   G  P++ SYT +I  FC++  M  +  +F++ V  G  P    Y
Sbjct: 346 MKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 405

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
           T +I G+  +  L    +    M + G  PD   Y  LI  +  Q   +    +Y+ MI+
Sbjct: 406 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 465

Query: 595 KGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWI---RTATTLVRKLCSERKVGM 651
             + P   T   +   Y    +      + D + KK       + T L+R L SE K   
Sbjct: 466 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 525

Query: 652 AALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSAR 693
           A  +  ++LD       +    F    +   +  +  +L+ R
Sbjct: 526 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 567



 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 2/209 (0%)

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
           R+GF+ +  TYN+++  L K  + +    +L++    GL   + T+ I +       + K
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERK 245

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
           +A+ +F  M K   +  + +   L+    R K   E+++ F++ ++  F P   TYT ++
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLL 304

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
            G+CR  NL  A + ++ M DHG  PD +A+  ++ GL +  K  +A  L+  M  KG  
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364

Query: 599 PCEVTRITLAYEYCKIDDCCSAMVILDRL 627
           P   +   +  ++CK     +A+   D +
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDM 393


>AT5G25630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:8947426-8949424 FORWARD
           LENGTH=574
          Length = 574

 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 197/445 (44%), Gaps = 42/445 (9%)

Query: 186 VMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRG 245
           +M +  E G    AQ +F+ ++  G  P   SY  ++ A             ++V    G
Sbjct: 51  LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAA-------------MTVQKQYG 97

Query: 246 FLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAF 305
                 S + I+SE                    G K + I F ++I    + G+++ A 
Sbjct: 98  ------SISSIVSEV----------------EQSGTKLDSIFFNAVINAFSESGNMEDAV 135

Query: 306 EMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN---KPNVLTYTAM 362
           + L +M   G  P   T+  LI G    G  E++  L L L+  E N    PN+ T+  +
Sbjct: 136 QALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL-LDLMLEEGNVDVGPNIRTFNVL 194

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD--LMNLMSRE 420
           +  +C+  K+  A  ++ +M+E G+ P+T TY T+   + + G   RA    +  ++ +E
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254

Query: 421 GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
              PN  T   +V G C++GRV++  + ++      +EA+ V +N LI+   +  D    
Sbjct: 255 KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGI 314

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
             + + M +  ++ D+ +Y+T++  +     M ++   F+E V+ G  P    Y+ +  G
Sbjct: 315 DEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 374

Query: 541 YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC 600
           Y R      A +    +      P+ + + T+ISG C    +D+A  +++ M + G+ P 
Sbjct: 375 YVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 433

Query: 601 EVTRITLAYEYCKIDDCCSAMVILD 625
             T  TL + Y ++     A  +L 
Sbjct: 434 IKTFETLMWGYLEVKQPWKAEEVLQ 458



 Score =  127 bits (318), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/436 (22%), Positives = 203/436 (46%), Gaps = 16/436 (3%)

Query: 157 EIGRLKEAVEMVFEMHNQGMVPNT---QTLNLVMKIACEMGLVDYAQYLFEEMSARGVHP 213
           E GR  EA  +   +   G  P+     TL   M +  + G +     +  E+   G   
Sbjct: 57  ERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS---IVSEVEQSGTKL 113

Query: 214 DSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA---L 270
           DS  +  ++ A+ + GN+ +A + L  M + G     +++  +I  +   G   R+   L
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELL 173

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
               +  ++ + PN+  F  +++  CK+  +++A+E++++M   G +P+  T+  +    
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY 233

Query: 331 CKKGWTEKA-FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
            +KG T +A   +  K+V  E  KPN  T   ++ GYCR+ ++      + RMKE  +  
Sbjct: 234 VQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           N   + +LI+G  +  + +   +++ LM       ++ TY+ +++     G +++A ++ 
Sbjct: 294 NLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVF 353

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
           K+    G++ D   Y+IL   + +  + K+A  L   +     +P++  +TT+I+ +C  
Sbjct: 354 KEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSN 412

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS--- 566
             M ++   F +  +FG  P  +T+ +++ GY        A +    M   G  P++   
Sbjct: 413 GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472

Query: 567 --IAYGTLISGLCKQS 580
             +A    ++GL  +S
Sbjct: 473 LLLAEAWRVAGLTDES 488



 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 176/370 (47%), Gaps = 49/370 (13%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ +F+E G +++AV+ + +M   G+ P T T N ++K     G  + +  L + M   G
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180

Query: 211 ---VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
              V P+  ++ V+V A+CK   V EA + +  M + G   D  ++  I + + +KG   
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETV 240

Query: 268 RA-------------------------------------LRYFHKFSDMGLKPNLINFTS 290
           RA                                     LR+  +  +M ++ NL+ F S
Sbjct: 241 RAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNS 300

Query: 291 MIEGLCK---RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           +I G  +   R  I +   +++E  C   K +V T++ +++     G+ EKA ++F ++V
Sbjct: 301 LINGFVEVMDRDGIDEVLTLMKE--CN-VKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 357

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
           ++   KP+   Y+ +  GY R  +  +AE LL  +  +   PN   +TT+I G C  G+ 
Sbjct: 358 KA-GVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSM 415

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           + A  + N M + G SPNI T+  ++ G  +  +  +A ++L+     G++ +  T+ +L
Sbjct: 416 DDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF-LL 474

Query: 468 ISEHCKQADI 477
           ++E  + A +
Sbjct: 475 LAEAWRVAGL 484



 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 152/330 (46%), Gaps = 45/330 (13%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R  E ++++ E  N  + PN +T N++++  C+   V+ A  + ++M   GV PD+ +Y 
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT-----LIISEFCEKGFATRALRYFH 274
            +   Y + G  + A+   S ++++  + + A        +++  +C +G     LR+  
Sbjct: 228 TIATCYVQKGETVRAE---SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284

Query: 275 KFSDMGLKPNLINFTSMIEGLCK-----------------------------------RG 299
           +  +M ++ NL+ F S+I G  +                                    G
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344

Query: 300 SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
            +++A ++ +EMV  G KP+ + ++ L  G  +    +KA  L   L+    ++PNV+ +
Sbjct: 345 YMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV--ESRPNVVIF 402

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
           T +I+G+C +  ++ A  +  +M + G+ PN  T+ TL+ G+ +     +A +++ +M  
Sbjct: 403 TTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRG 462

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
            G  P   T+  + +     G   E+ K +
Sbjct: 463 CGVKPENSTFLLLAEAWRVAGLTDESNKAI 492



 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/397 (20%), Positives = 155/397 (39%), Gaps = 77/397 (19%)

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL------------------ 397
           V + T ++N      + + A+ +   + E G  P+  +YTTL                  
Sbjct: 45  VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104

Query: 398 -----------------IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
                            I+   ++GN E A   +  M   G +P   TYN ++ G    G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164

Query: 441 RVQEAYKMLKDGFHNG---LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIH 497
           + + + ++L      G   +  +  T+N+L+   CK+  +++A  +  KM + G++PD  
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224

Query: 498 SYTTLIAVFCR--EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
           +Y T+   + +  E   +ESE+  +  ++    P  RT   ++ GYCREG +   ++F  
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284

Query: 556 RMSD--------------HGCV---------------------PDSIAYGTLISGLCKQS 580
           RM +              +G V                      D I Y T+++      
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344

Query: 581 KLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL--EKKLWIRTATT 638
            +++A  ++  M++ G+ P       LA  Y +  +   A  +L+ L  E +  +   TT
Sbjct: 345 YMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTT 404

Query: 639 LVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
           ++   CS   +  A   F+K+       N  T    M
Sbjct: 405 VISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441



 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/318 (21%), Positives = 142/318 (44%), Gaps = 39/318 (12%)

Query: 137 GNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLV 196
           GN ++         +V+++ +  +++EA E+V +M   G+ P+T T N +     + G  
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239

Query: 197 DYAQY-LFEEMSAR-GVHPDSASYRVMVVAYCKMGNVLEA-------------------- 234
             A+  + E+M  +    P+  +  ++V  YC+ G V +                     
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299

Query: 235 ---------------DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
                          D+ L++M +     D  +++ +++ +   G+  +A + F +    
Sbjct: 300 SLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKA 359

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+KP+   ++ + +G  +    K+A E+LE ++ +  +PNV   T +I G C  G  + A
Sbjct: 360 GVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDA 418

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            R+F K+ +     PN+ T+  ++ GY    +  +AE +L  M+  G+ P  +T+  L +
Sbjct: 419 MRVFNKMCKF-GVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAE 477

Query: 400 GHCKAGNFERAFDLMNLM 417
               AG  + +   +N +
Sbjct: 478 AWRVAGLTDESNKAINAL 495



 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 12/259 (4%)

Query: 432 IVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           +++ L ++GR  EA  + K     G     ++Y  L++    Q       ++ S++ +SG
Sbjct: 51  LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
            + D   +  +I  F     M ++     +    G  PT  TY ++I GY   G    + 
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170

Query: 552 KFFHRMSDHGCV---PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
           +    M + G V   P+   +  L+   CK+ K++EA  +   M E G+ P  VT  T+A
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230

Query: 609 YEYCKIDDCCSA-------MVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLD 661
             Y +  +   A       MV+ ++ +     RT   +V   C E +V     F  ++ +
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNG--RTCGIVVGGYCREGRVRDGLRFVRRMKE 288

Query: 662 MDFHVNRVTLAAFMTACYE 680
           M    N V   + +    E
Sbjct: 289 MRVEANLVVFNSLINGFVE 307


>AT1G53330.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:19896027-19897442 FORWARD
           LENGTH=471
          Length = 471

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 180/410 (43%), Gaps = 47/410 (11%)

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAY----CKMGNVLEADKWLSVML----DRGFLVDN 250
           A  LF        +P    +R  ++ Y     K+G     D+   V+L    D   +   
Sbjct: 25  AMKLFRNPDPESTNP-KRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTE 83

Query: 251 ASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEE 310
             F  +I+ F      +RAL  F +      +  + +  S++  L K G +++  E L  
Sbjct: 84  IIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSS 143

Query: 311 MVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDD 370
           +   G KP+  T+  LI G  + G  + A +LF ++V+ +  KP  +T+  +I+G C+D 
Sbjct: 144 IDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVK-KKVKPTGVTFGTLIHGLCKDS 201

Query: 371 KLNRA-EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTY 429
           ++  A +M    +K  G+ P  + Y +LI   C+ G    AF L +         +   Y
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIY 261

Query: 430 NAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAK 489
           + ++  L K GR  E   +L++    G + D VTYN+LI+  C + D + A  +  +M +
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE 321

Query: 490 SGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTM 549
            G++PD+ SY  ++ VF R K+  E+   FE+                            
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFED---------------------------- 353

Query: 550 AIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
                  M   GC PD+++Y  +  GLC+  + +EA  + D M+ KG  P
Sbjct: 354 -------MPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396



 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 140/307 (45%), Gaps = 1/307 (0%)

Query: 282 KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFR 341
           KP+   +  +I G  + G    A ++ +EMV +  KP   T   LI GLCK    ++A +
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208

Query: 342 LFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGH 401
           +   +++    +P V  Y ++I   C+  +L+ A  L     E  +  +   Y+TLI   
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
            KAG       ++  MS +G  P+  TYN +++G C +   + A ++L +    GL+ D 
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
           ++YN+++    +    ++A  LF  M + G  PD  SY  +    C   +  E+ +  +E
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388

Query: 522 AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
            +  G+ P +      +   C  G L +  K    +   G   D+  +  +I  +CK+  
Sbjct: 389 MLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCKEPV 447

Query: 582 LDEARGL 588
           + ++  L
Sbjct: 448 ISDSIDL 454



 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 157/335 (46%), Gaps = 7/335 (2%)

Query: 156 AEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDS 215
            E+ ++KE +  + E       P+  T N+++    + G  D A  LF+EM  + V P  
Sbjct: 132 GELEKMKERLSSIDEFGK----PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTG 187

Query: 216 ASYRVMVVAYCKMGNVLEADKWLSVMLD-RGFLVDNASFTLIISEFCEKGFATRALRYFH 274
            ++  ++   CK   V EA K    ML   G       +  +I   C+ G  + A +   
Sbjct: 188 VTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKD 247

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           +  +  +K +   ++++I  L K G   +   +LEEM  +G KP+  T+  LI+G C + 
Sbjct: 248 EAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEN 307

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
            +E A R+  ++V  +  KP+V++Y  ++  + R  K   A  L   M  +G  P+T +Y
Sbjct: 308 DSESANRVLDEMVE-KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
             + DG C+   FE A  +++ M  +G+ P        +  LC+ G+++   K++    H
Sbjct: 367 RIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVIS-SLH 425

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAK 489
            G+  D   ++++I   CK+  I  ++ L     K
Sbjct: 426 RGIAGDADVWSVMIPTMCKEPVISDSIDLLLNTVK 460



 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 113/237 (47%), Gaps = 3/237 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++++  +IG L  A ++  E +   +  +    + ++    + G  +    + EEMS +G
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD+ +Y V++  +C   +   A++ L  M+++G   D  S+ +I+  F        A 
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEAT 348

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F      G  P+ +++  + +GLC+    ++A  +L+EM+ +G+KP        +  L
Sbjct: 349 YLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKL 408

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA-EMLLGRMKEQG 386
           C+ G  E   ++   L R      +V  ++ MI   C++  ++ + ++LL  +KE G
Sbjct: 409 CESGKLEILSKVISSLHRGIAGDADV--WSVMIPTMCKEPVISDSIDLLLNTVKEDG 463



 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 1/174 (0%)

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
           + D  TYNILI    +      AL LF +M K  ++P   ++ TLI   C++ R+ E+  
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208

Query: 518 FFEEAVR-FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
              + ++ +G  PT   Y S+I   C+ G L+ A K      +     D+  Y TLIS L
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268

Query: 577 CKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
            K  + +E   + + M EKG  P  VT   L   +C  +D  SA  +LD + +K
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEK 322



 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 126/273 (46%), Gaps = 4/273 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHN-QGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
           ++    +  R+KEA++M  +M    G+ P       ++K  C++G + +A  L +E    
Sbjct: 193 LIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG 252

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
            +  D+A Y  ++ +  K G   E    L  M ++G   D  ++ ++I+ FC +  +  A
Sbjct: 253 KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESA 312

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
            R   +  + GLKP++I++  ++    +    ++A  + E+M  +G  P+  ++  + DG
Sbjct: 313 NRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDG 372

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
           LC+    E+A  + L  +  +  KP        +   C   KL     ++  +  +G+  
Sbjct: 373 LCEGLQFEEA-AVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAG 430

Query: 390 NTNTYTTLIDGHCKAGNFERAFD-LMNLMSREG 421
           + + ++ +I   CK      + D L+N +  +G
Sbjct: 431 DADVWSVMIPTMCKEPVISDSIDLLLNTVKEDG 463


>AT3G59040.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:21821495-21823919 REVERSE
           LENGTH=590
          Length = 590

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 180/414 (43%), Gaps = 10/414 (2%)

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS 277
           +RV+ +        L+  + + V  D     D   +  ++ E    G A   LR +    
Sbjct: 45  FRVVCMGMLAPRKFLQKRRKMEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDG 104

Query: 278 DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW-KPNVYTHTALIDGLCKKGWT 336
           D GL  +L+  T +     K+ ++    E+LE +  Q W   +      LI    K G  
Sbjct: 105 DQGLPRDLVLGTLVRFKQLKKWNL--VSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNF 162

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT 396
             A R+ L ++    + PNV++YTA++  Y R  K N AE +  RM+  G  P+  TY  
Sbjct: 163 NGAERV-LSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQI 221

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSP---NICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           ++    +   F+ A ++   +  E  SP   +   Y+ ++    K G  ++A K+     
Sbjct: 222 ILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV 281

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
             G+    VTYN L+S    +   K+   ++ +M +S IQPD+ SY  LI  + R +R  
Sbjct: 282 GKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 338

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           E+   FEE +  G  PT + Y  ++  +   G +  A   F  M      PD  +Y T++
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398

Query: 574 SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
           S     S ++ A   +  +   G  P  VT  TL   Y K +D    M + +++
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452



 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 159/359 (44%), Gaps = 9/359 (2%)

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           F ++I+ + + G    A R     S MG  PN+I++T+++E   + G    A  +   M 
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN--KPNVLTYTAMINGYCRDD 370
             G +P+  T+  ++    +    ++A  +F  L+  + +  KP+   Y  MI  Y +  
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
              +A  +   M  +G+  +T TY +L+          + +D M    R    P++ +Y 
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ---RSDIQPDVVSYA 325

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            ++    +  R +EA  + ++    G+      YNIL+        ++QA  +F  M + 
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
            I PD+ SYTT+++ +     M  +E FF+     GF P   TY ++I GY +  ++   
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 445

Query: 551 IKFFHRMSDHGCVPDSIAYGTLI--SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           ++ + +M   G   +     T++  SG CK      A G Y  M   G+ P +  +  L
Sbjct: 446 MEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPDQKAKNVL 502



 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 172/375 (45%), Gaps = 13/375 (3%)

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++ AY K+GN   A++ LSV+   G   +  S+T ++  +   G    A   F +    
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG---WKPNVYTHTALIDGLCKKGWT 336
           G +P+ I +  +++   +    K+A E+ E ++ +     KP+   +  +I    K G  
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT 396
           EKA ++F  +V  +    + +TY ++++      ++++   +  +M+   + P+  +Y  
Sbjct: 271 EKARKVFSSMV-GKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYAL 326

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
           LI  + +A   E A  +   M   G  P    YN ++D     G V++A  + K    + 
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386

Query: 457 LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE 516
           +  D  +Y  ++S +   +D++ A   F ++   G +P+I +Y TLI  + +   + E  
Sbjct: 387 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV-EKM 445

Query: 517 MFFEEAVRFGFIPTKRTYTSMI---CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           M   E +R   I   +T  + I    G C+  N   A+ ++  M   G  PD  A   L+
Sbjct: 446 MEVYEKMRLSGIKANQTILTTIMDASGRCK--NFGSALGWYKEMESCGVPPDQKAKNVLL 503

Query: 574 SGLCKQSKLDEARGL 588
           S    Q +L+EA+ L
Sbjct: 504 SLASTQDELEEAKEL 518



 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/369 (17%), Positives = 167/369 (45%), Gaps = 7/369 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ ++ ++G    A  ++  +   G  PN  +   +M+     G  + A+ +F  M + G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRG---FLVDNASFTLIISEFCEKGFAT 267
             P + +Y++++  + +     EA++    +LD        D   + ++I  + + G   
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
           +A + F      G+  + + + S+   +    S K+  ++ ++M     +P+V ++  LI
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLI 328

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
               +    E+A  +F +++ +   +P    Y  +++ +     + +A+ +   M+   +
Sbjct: 329 KAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            P+  +YTT++  +  A + E A      +  +GF PNI TY  ++ G  K   V++  +
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 447

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           + +    +G++A++     ++    +  +   AL  + +M   G+ PD  +   L+++  
Sbjct: 448 VYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLAS 507

Query: 508 REKRMSESE 516
            +  + E++
Sbjct: 508 TQDELEEAK 516



 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)

Query: 139 GNLQKAHEVMQCMV-----RSFAEIGRL-------KEAVEMVFEMHNQGMVPNTQTLNLV 186
           GN +KA +V   MV     +S      L       KE  ++  +M    + P+  +  L+
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 327

Query: 187 MKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGF 246
           +K        + A  +FEEM   GV P   +Y +++ A+   G V +A      M     
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
             D  S+T ++S +        A ++F +    G +PN++ + ++I+G  K   +++  E
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 447

Query: 307 MLEEMVCQGWKPNVYTHTALID--GLCKK-----GW 335
           + E+M   G K N    T ++D  G CK      GW
Sbjct: 448 VYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 483


>AT1G71210.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:26838850-26841489 REVERSE
           LENGTH=879
          Length = 879

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 191/449 (42%), Gaps = 10/449 (2%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA- 208
           C  R F E  +L + +++V      G V   +  N+ ++   + G ++      +++S  
Sbjct: 297 CSKRKFQEATKLLDEIKLV------GTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPL 350

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G   +   Y  MV    K  N+      L+ M+ RG   +  +    +  FC+ GF   
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           AL  +   S++G  P  +++  +I  LC   S++QA+++L+  + +G      T + L +
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTN 470

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
            LC KG  + A  L +      +  P  +    +I+  C   K+  A M+     + G+ 
Sbjct: 471 ALCWKGKPDMARELVIAAA-ERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVD 529

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
            +   +T+LI G       + A  L+  M  +G++P    Y  ++  +C+    ++ +  
Sbjct: 530 TSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFT 589

Query: 449 LKDGFHNGLEADKV-TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
               F   L   KV  YN+ I         K A  ++  M + GI P + S   ++  + 
Sbjct: 590 TLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYL 649

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
           + ++++++  FF +    G    KR Y  MI G C+   L  A+ F   M   G  P   
Sbjct: 650 KNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIE 708

Query: 568 AYGTLISGLCKQSKLDEARGLYDSMIEKG 596
            Y   I  LC + K DEA GL +   + G
Sbjct: 709 CYEVNIQKLCNEEKYDEAVGLVNEFRKSG 737



 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/509 (21%), Positives = 194/509 (38%), Gaps = 49/509 (9%)

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF 253
           G  D A   F  M  RG+  DS  Y V++ A  +       D     +  RGF V   + 
Sbjct: 196 GRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGF-VCAVTH 254

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMGLKPNLI-----NFTSMIEGLCKRGSIKQAFEML 308
           ++++ +FC++G    A  Y        L PN           +++ LC +   ++A ++L
Sbjct: 255 SILVKKFCKQGKLDEAEDYLR-----ALLPNDPAGCGSGLGILVDALCSKRKFQEATKLL 309

Query: 309 EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR 368
           +E+   G       +   I  L K G+         K+   E  +  V  Y +M+    +
Sbjct: 310 DEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLK 369

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
           ++ L+    +L  M  +G+ PN  T    +   CKAG  + A +L    S  GF+P   +
Sbjct: 370 ENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMS 429

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           YN ++  LC    V++AY +LK     G      T++ L +  C +     A  L    A
Sbjct: 430 YNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAA 489

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
           +  + P   +   +I+  C   ++ ++ M  E   + G   + + +TS+I G        
Sbjct: 490 ERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGD 549

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE------------------------ 584
           +A K   RM + G  P    Y  +I  +C+    ++                        
Sbjct: 550 IAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLF 609

Query: 585 ------------ARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD--RLEKK 630
                       AR +YD M   G+ P   + I +   Y K +    A+      R + K
Sbjct: 610 IEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGK 669

Query: 631 LWIRTATTLVRKLCSERKVGMAALFFHKL 659
              R    ++  LC   K+  A  F  ++
Sbjct: 670 TKKRLYQVMIVGLCKANKLDDAMHFLEEM 698



 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 103/487 (21%), Positives = 176/487 (36%), Gaps = 78/487 (16%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           MV    +   L    +++ EM  +G+ PN +T+N  +   C+ G VD A  L+   S  G
Sbjct: 363 MVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIG 422

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL--------------- 255
             P + SY  ++   C   +V +A   L   +DRG  +   +F+                
Sbjct: 423 FAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAR 482

Query: 256 --------------------IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG- 294
                               IIS  C+ G    AL     F+  G+  +   FTS+I G 
Sbjct: 483 ELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGS 542

Query: 295 -LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF------------- 340
               RG I  A +++  M  +G+ P    +  +I  +C+    EK F             
Sbjct: 543 ITLMRGDI--AAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWE 600

Query: 341 ----------------------RLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
                                 RL   ++  +   P V +   M+  Y +++K+  A   
Sbjct: 601 HKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHF 660

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
              ++EQG       Y  +I G CKA   + A   +  M  EG  P+I  Y   +  LC 
Sbjct: 661 FHDLREQGK-TKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCN 719

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
           + +  EA  ++ +   +G        N+L+    K   + +A      +      P++ S
Sbjct: 720 EEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDK--IPEMKS 777

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS 558
              LI +F     M       +E +   +     TY +M+           A +   R++
Sbjct: 778 LGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTY-NMLLRMIVMNQAEDAYEMVERIA 836

Query: 559 DHGCVPD 565
             G VP+
Sbjct: 837 RRGYVPN 843



 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 165/394 (41%), Gaps = 20/394 (5%)

Query: 203 FEEMSAR--GVHPDSASYRVMVVAYCKMGNVLEADKWLSVM---LDRGFLVDNASFTLII 257
           F + +AR  G H   A++  +         +L   K +++M   LDR    ++   +L +
Sbjct: 132 FFDWAARQPGFHHTRATFHAIF-------KILRGAKLVTLMIDFLDRSVGFESCRHSLRL 184

Query: 258 SEFCEKGFATR-----ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
            +    G+A       AL++F      GL  +   +  ++  L +         + +++ 
Sbjct: 185 CDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQIS 244

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
            +G+   V TH+ L+   CK+G  ++A   +L+ +   +          +++  C   K 
Sbjct: 245 VRGFVCAV-THSILVKKFCKQGKLDEA-EDYLRALLPNDPAGCGSGLGILVDALCSKRKF 302

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR-EGFSPNICTYNA 431
             A  LL  +K  G +     Y   I    KAG      D +  +S  EG    +  YN+
Sbjct: 303 QEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNS 362

Query: 432 IVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           +V  L K+  +   Y +L +    G+  +K T N  +   CK   + +AL L+   ++ G
Sbjct: 363 MVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIG 422

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
             P   SY  LI   C  + + ++    + A+  G     +T++++    C +G   MA 
Sbjct: 423 FAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAR 482

Query: 552 KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
           +     ++   +P  IA   +IS LC   K+++A
Sbjct: 483 ELVIAAAERDLLPKRIAGCKIISALCDVGKVEDA 516



 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 87/424 (20%), Positives = 168/424 (39%), Gaps = 37/424 (8%)

Query: 134 SLIGNGNLQKAHEVMQCMV--------RSFAEI-------GRLKEAVEMVFEMHNQGMVP 178
           +L  N ++++A++V++  +        ++F+ +       G+   A E+V     + ++P
Sbjct: 436 TLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLP 495

Query: 179 NTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL 238
                  ++   C++G V+ A  + E  +  GV      +  ++     +     A K +
Sbjct: 496 KRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLI 555

Query: 239 SVMLDRGFLVDNASFTLIISEFCE-----KGFATRALRYFHKFSDMGLKPNLINFTSMIE 293
             M ++G+    + +  +I   CE     K F T  L++     +  ++     +   IE
Sbjct: 556 IRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQA----YNLFIE 611

Query: 294 GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
           G    G  K A  + + M   G  P V ++  ++    K      A   F  L   E  K
Sbjct: 612 GAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDL--REQGK 669

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
                Y  MI G C+ +KL+ A   L  MK +GL P+   Y   I   C    ++ A  L
Sbjct: 670 TKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGL 729

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV----TYNILIS 469
           +N   + G        N ++    K   V EA+  +++        DK+    +   LI 
Sbjct: 730 VNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRN------IEDKIPEMKSLGELIG 783

Query: 470 EHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
               + D++  L    ++ +     D+++Y  L+ +    +     EM  E   R G++P
Sbjct: 784 LFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIVMNQAEDAYEM-VERIARRGYVP 842

Query: 530 TKRT 533
            +RT
Sbjct: 843 NERT 846


>AT3G59040.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:21821495-21824233 REVERSE
           LENGTH=583
          Length = 583

 Score =  127 bits (320), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 180/414 (43%), Gaps = 10/414 (2%)

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS 277
           +RV+ +        L+  + + V  D     D   +  ++ E    G A   LR +    
Sbjct: 38  FRVVCMGMLAPRKFLQKRRKMEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDG 97

Query: 278 DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW-KPNVYTHTALIDGLCKKGWT 336
           D GL  +L+  T +     K+ ++    E+LE +  Q W   +      LI    K G  
Sbjct: 98  DQGLPRDLVLGTLVRFKQLKKWNL--VSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNF 155

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT 396
             A R+ L ++    + PNV++YTA++  Y R  K N AE +  RM+  G  P+  TY  
Sbjct: 156 NGAERV-LSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQI 214

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSP---NICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           ++    +   F+ A ++   +  E  SP   +   Y+ ++    K G  ++A K+     
Sbjct: 215 ILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV 274

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMS 513
             G+    VTYN L+S    +   K+   ++ +M +S IQPD+ SY  LI  + R +R  
Sbjct: 275 GKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 331

Query: 514 ESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           E+   FEE +  G  PT + Y  ++  +   G +  A   F  M      PD  +Y T++
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391

Query: 574 SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
           S     S ++ A   +  +   G  P  VT  TL   Y K +D    M + +++
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445



 Score =  120 bits (301), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 159/359 (44%), Gaps = 9/359 (2%)

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           F ++I+ + + G    A R     S MG  PN+I++T+++E   + G    A  +   M 
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN--KPNVLTYTAMINGYCRDD 370
             G +P+  T+  ++    +    ++A  +F  L+  + +  KP+   Y  MI  Y +  
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
              +A  +   M  +G+  +T TY +L+          + +D M    R    P++ +Y 
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ---RSDIQPDVVSYA 318

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            ++    +  R +EA  + ++    G+      YNIL+        ++QA  +F  M + 
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
            I PD+ SYTT+++ +     M  +E FF+     GF P   TY ++I GY +  ++   
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 438

Query: 551 IKFFHRMSDHGCVPDSIAYGTLI--SGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           ++ + +M   G   +     T++  SG CK      A G Y  M   G+ P +  +  L
Sbjct: 439 MEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPDQKAKNVL 495



 Score =  110 bits (275), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 172/375 (45%), Gaps = 13/375 (3%)

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++ AY K+GN   A++ LSV+   G   +  S+T ++  +   G    A   F +    
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG---WKPNVYTHTALIDGLCKKGWT 336
           G +P+ I +  +++   +    K+A E+ E ++ +     KP+   +  +I    K G  
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT 396
           EKA ++F  +V  +    + +TY ++++      ++++   +  +M+   + P+  +Y  
Sbjct: 264 EKARKVFSSMV-GKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYAL 319

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
           LI  + +A   E A  +   M   G  P    YN ++D     G V++A  + K    + 
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379

Query: 457 LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE 516
           +  D  +Y  ++S +   +D++ A   F ++   G +P+I +Y TLI  + +   + E  
Sbjct: 380 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV-EKM 438

Query: 517 MFFEEAVRFGFIPTKRTYTSMI---CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLI 573
           M   E +R   I   +T  + I    G C+  N   A+ ++  M   G  PD  A   L+
Sbjct: 439 MEVYEKMRLSGIKANQTILTTIMDASGRCK--NFGSALGWYKEMESCGVPPDQKAKNVLL 496

Query: 574 SGLCKQSKLDEARGL 588
           S    Q +L+EA+ L
Sbjct: 497 SLASTQDELEEAKEL 511



 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/369 (17%), Positives = 167/369 (45%), Gaps = 7/369 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ ++ ++G    A  ++  +   G  PN  +   +M+     G  + A+ +F  M + G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRG---FLVDNASFTLIISEFCEKGFAT 267
             P + +Y++++  + +     EA++    +LD        D   + ++I  + + G   
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
           +A + F      G+  + + + S+   +    S K+  ++ ++M     +P+V ++  LI
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLI 321

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
               +    E+A  +F +++ +   +P    Y  +++ +     + +A+ +   M+   +
Sbjct: 322 KAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            P+  +YTT++  +  A + E A      +  +GF PNI TY  ++ G  K   V++  +
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 440

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           + +    +G++A++     ++    +  +   AL  + +M   G+ PD  +   L+++  
Sbjct: 441 VYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLAS 500

Query: 508 REKRMSESE 516
            +  + E++
Sbjct: 501 TQDELEEAK 509



 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)

Query: 139 GNLQKAHEVMQCMV-----RSFAEIGRL-------KEAVEMVFEMHNQGMVPNTQTLNLV 186
           GN +KA +V   MV     +S      L       KE  ++  +M    + P+  +  L+
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 320

Query: 187 MKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGF 246
           +K        + A  +FEEM   GV P   +Y +++ A+   G V +A      M     
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
             D  S+T ++S +        A ++F +    G +PN++ + ++I+G  K   +++  E
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 440

Query: 307 MLEEMVCQGWKPNVYTHTALID--GLCKK-----GW 335
           + E+M   G K N    T ++D  G CK      GW
Sbjct: 441 VYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 476


>AT5G18390.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:6090954-6092333 FORWARD
           LENGTH=459
          Length = 459

 Score =  127 bits (319), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 150/332 (45%), Gaps = 1/332 (0%)

Query: 269 ALRYFH-KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
           +LR+F+   S+    P  + +  + + L      +  +++L++M       +  T   +I
Sbjct: 94  SLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFII 153

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           +   K G  ++A  LF  + ++   +  V  Y ++++  C     + A  L+ RM  +GL
Sbjct: 154 EQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGL 213

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            P+  TY  L++G C AG  + A + ++ MSR GF+P     + +++GL   G ++ A +
Sbjct: 214 KPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKE 273

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           M+      G   D  T+NILI    K  +++  + ++    K G+  DI +Y TLI    
Sbjct: 274 MVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVS 333

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
           +  ++ E+       V  G  P    Y  +I G CR G    A  FF  M      P+  
Sbjct: 334 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRP 393

Query: 568 AYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            Y  LI+   +  K  +A      M E GL+P
Sbjct: 394 VYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425



 Score =  120 bits (301), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 132/296 (44%), Gaps = 2/296 (0%)

Query: 291 MIEGLCKRGSIKQAFEMLEEMV-CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
           +IE   K G + QA E+   +    G +  V  + +L+  LC       A+ L  +++R 
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIR- 210

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
           +  KP+  TY  ++NG+C   K+  A+  L  M  +G  P       LI+G   AG  E 
Sbjct: 211 KGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLES 270

Query: 410 AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILIS 469
           A ++++ M++ GF P+I T+N +++ + K G V+   +M       GL  D  TY  LI 
Sbjct: 271 AKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIP 330

Query: 470 EHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
              K   I +A  L +   + G +P    Y  +I   CR     ++  FF +       P
Sbjct: 331 AVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPP 390

Query: 530 TKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
            +  YT +I    R G    A  +   M++ G VP S  +  +  GL    K D A
Sbjct: 391 NRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLA 446



 Score =  109 bits (273), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 144/350 (41%), Gaps = 17/350 (4%)

Query: 108 ALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCM---------------V 152
           +L FF+WA     +      Y   A SL  +   +   ++++ M               +
Sbjct: 94  SLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFII 153

Query: 153 RSFAEIGRLKEAVEMVFEMHNQ-GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
             + + G + +AVE+   +    G        N ++   C++ +   A  L   M  +G+
Sbjct: 154 EQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGL 213

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            PD  +Y ++V  +C  G + EA ++L  M  RGF        L+I      G+   A  
Sbjct: 214 KPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKE 273

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
              K +  G  P++  F  +IE + K G ++   EM       G   ++ T+  LI  + 
Sbjct: 274 MVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVS 333

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
           K G  ++AFRL    V  + +KP    Y  +I G CR+   + A      MK +   PN 
Sbjct: 334 KIGKIDEAFRLLNNCVE-DGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNR 392

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
             YT LI    + G F  A + +  M+  G  P    ++ + DGL   G+
Sbjct: 393 PVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGK 442



 Score =  105 bits (261), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 1/275 (0%)

Query: 142 QKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQY 201
           Q+  +V   ++ +  ++     A  ++  M  +G+ P+ +T  +++   C  G +  AQ 
Sbjct: 179 QQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQE 238

Query: 202 LFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFC 261
             +EMS RG +P +    +++      G +  A + +S M   GF+ D  +F ++I    
Sbjct: 239 FLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAIS 298

Query: 262 EKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVY 321
           + G     +  ++    +GL  ++  + ++I  + K G I +AF +L   V  G KP   
Sbjct: 299 KSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPS 358

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
            +  +I G+C+ G  + AF  F  + + + + PN   YT +I    R  K   A   L  
Sbjct: 359 LYAPIIKGMCRNGMFDDAFSFFSDM-KVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVE 417

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNL 416
           M E GL+P +  +  + DG    G  + A  +  L
Sbjct: 418 MTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQL 452



 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 137/367 (37%), Gaps = 53/367 (14%)

Query: 336 TEKAFRLFLKLVRSENNK--------------PNVLTYTAMINGYCRDDKLNRAEMLLGR 381
           +E  FR+     RS N+               P  + Y  +        K      +L +
Sbjct: 77  SEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQ 136

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE-GFSPNICTYNAIVDGLCKKG 440
           MK+  L  +  T   +I+ + K G+ ++A +L N + +  G    +  YN+++  LC   
Sbjct: 137 MKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCD-- 194

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
                 KM    FH                         A AL  +M + G++PD  +Y 
Sbjct: 195 -----VKM----FHG------------------------AYALIRRMIRKGLKPDKRTYA 221

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
            L+  +C   +M E++ F +E  R GF P  R    +I G    G L  A +   +M+  
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG 281

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSA 620
           G VPD   +  LI  + K  +++    +Y +  + GL     T  TL     KI     A
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341

Query: 621 MVILDRLEK---KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTA 677
             +L+   +   K +      +++ +C       A  FF  +       NR      +T 
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITM 401

Query: 678 CYESNKY 684
           C    K+
Sbjct: 402 CGRGGKF 408


>AT2G35030.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:14761080-14762963 REVERSE
           LENGTH=627
          Length = 627

 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 166/343 (48%), Gaps = 38/343 (11%)

Query: 282 KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFR 341
           +P +     +I  LCK G I +A ++ + +     + +V T T +I G  K G   +A  
Sbjct: 43  RPRVPQPEWLIGELCKVGKIAEARKLFDGLP----ERDVVTWTHVITGYIKLGDMREARE 98

Query: 342 LFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGH 401
           LF ++    +++ NV+T+TAM++GY R  +L+ AEML   M E+ ++    ++ T+IDG+
Sbjct: 99  LFDRV----DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGY 150

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
            ++G  ++A +L + M       NI ++N++V  L ++GR+ EA  +    F      D 
Sbjct: 151 AQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNL----FERMPRRDV 202

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
           V++  ++    K   + +A  LF  M     + +I S+  +I  + +  R+ E++  F+ 
Sbjct: 203 VSWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLFQV 258

Query: 522 AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
                F     ++ +MI G+ R   +  A   F RM +       I++ T+I+G  +  +
Sbjct: 259 MPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKE 310

Query: 582 LDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVIL 624
            +EA  ++  M+  G +   V        Y  I   CS +  L
Sbjct: 311 NEEALNVFSKMLRDGSVKPNVG------TYVSILSACSDLAGL 347



 Score =  112 bits (281), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 100/483 (20%), Positives = 220/483 (45%), Gaps = 50/483 (10%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
           + ++    ++G++ EA ++   +  + +V  T  +   +K    +G +  A+ LF+ + +
Sbjct: 50  EWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIK----LGDMREARELFDRVDS 105

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
           R    +  ++  MV  Y +   +  A+     M +R  +    S+  +I  + + G   +
Sbjct: 106 R---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGYAQSGRIDK 158

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           AL  F +  +     N++++ SM++ L +RG I +A  + E M     + +V + TA++D
Sbjct: 159 ALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVD 210

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
           GL K G  ++A RLF  +      + N++++ AMI GY ++++++ A+ L   M E+   
Sbjct: 211 GLAKNGKVDEARRLFDCMP-----ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFA 265

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY-- 446
               ++ T+I G  +     +A  L + M  +    N+ ++  ++ G  +    +EA   
Sbjct: 266 ----SWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKENEEALNV 317

Query: 447 --KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
             KML+DG    ++ +  TY  ++S     A + +   +   ++KS  Q +    + L+ 
Sbjct: 318 FSKMLRDG---SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLN 374

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKR--TYTSMICGYCREGNLTMAIKFFHRMSDHGC 562
           ++ +   +  +   F+     G +  +   ++ SMI  Y   G+   AI+ +++M  HG 
Sbjct: 375 MYSKSGELIAARKMFDN----GLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGF 430

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMV 622
            P ++ Y  L+        +++    +  ++    +P      T     C +D C  A  
Sbjct: 431 KPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYT-----CLVDLCGRAGR 485

Query: 623 ILD 625
           + D
Sbjct: 486 LKD 488


>AT1G05600.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:1672161-1673675 FORWARD
           LENGTH=504
          Length = 504

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 165/404 (40%), Gaps = 78/404 (19%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHN--------------QGMVPNTQ----------- 181
           V   ++R+F+  GRL++A+ +   +H               Q MV  ++           
Sbjct: 83  VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142

Query: 182 -----------TLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGN 230
                       LNL+MK+ C++   D A  +F+EM+ +G +PD  SYR+++  +C  G 
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202

Query: 231 VLEADKWLSVML----DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK---- 282
           + EA   L  M      +G   D   + +++   C+ G    A+    K    GLK    
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKR 262

Query: 283 ---------------------------------PNLINFTSMIEGLCKRGSIKQAFEMLE 309
                                            P L ++++M   L + G + +  E+L 
Sbjct: 263 CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLL 322

Query: 310 EMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRD 369
            M  +G++P  + + A +  LC+ G  ++A  +  K +   +  P V  Y  +I G C D
Sbjct: 323 AMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382

Query: 370 DKLNRAEMLLGRMKEQ-GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
            K   A   L +M +Q   + N  TY TL+DG C+ G F  A  +M  M  +   P + T
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           Y+ ++ GLC   R  EA   L++     +  +   +  L    C
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486



 Score =  103 bits (257), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/463 (21%), Positives = 198/463 (42%), Gaps = 16/463 (3%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR--GVHPDSASYRVMVVAYCKMGNVLEAD 235
           P   T +L+ +I  +      A  LFEE   R      + + Y  M+    K   VLE  
Sbjct: 7   PRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMK 66

Query: 236 KWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
             +  M +      ++ F  +I  F   G    A+  F    +       ++F ++++ +
Sbjct: 67  YVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEM 126

Query: 296 CKRGSIKQAFEMLEEMVCQGWKPN--VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
            K   ++ A  +  +  C GW+ N  +     L+  LC+   ++ A ++F ++   +   
Sbjct: 127 VKESELEAACHIFRKY-CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEM-NYQGCY 184

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLL----GRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
           P+  +Y  ++ G+C + KL  A  LL     R+ ++G   +   Y  L+D  C AG  + 
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244

Query: 410 AFDLMNLMSREGF-SPNICTYNAIVDGLCKKGR--VQEAYKMLKDGFHNGLEADKVTYNI 466
           A +++  + R+G  +P  C Y+ I  G  +     ++   ++L +    G      +Y+ 
Sbjct: 245 AIEILGKILRKGLKAPKRC-YHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES-EMFFEEAVRF 525
           + ++  ++  + +   +   M   G +P    Y   +   CR  ++ E+  +  +E ++ 
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363

Query: 526 GFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH-GCVPDSIAYGTLISGLCKQSKLDE 584
             +PT   Y  +I G C +G    A+ +  +MS    CV +   Y TL+ GLC+  +  E
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423

Query: 585 ARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
           A  + + M+ K   P   T   +    C +D    A++ L+ +
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM 466



 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/427 (20%), Positives = 185/427 (43%), Gaps = 12/427 (2%)

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
           +Y+ E M         + +  ++  + + G + +A      + +   +  + SF  ++ E
Sbjct: 66  KYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQE 125

Query: 260 FCEKGFATRALRYFHKFSDMGLKPN--LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
             ++     A   F K+   G + N  +     +++ LC+      A ++ +EM  QG  
Sbjct: 126 MVKESELEAACHIFRKYC-YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCY 184

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKL---VRSENNKPNVLTYTAMINGYCRDDKLNR 374
           P+  ++  L+ G C +G  E+A  L   +   +  + +  +++ Y  +++  C   +++ 
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN--FERAFDLMNLMSREGFSPNICTYNAI 432
           A  +LG++  +GL      Y  +  GH ++ +   ER   L+      G  P + +Y+A+
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAM 304

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK-MAKSG 491
              L ++G++ E  ++L      G E     Y   +   C+   +K+A+++ +K M +  
Sbjct: 305 ATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGH 364

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEE-AVRFGFIPTKRTYTSMICGYCREGNLTMA 550
             P +  Y  LI   C + +  E+  + ++ + +   +  + TY +++ G CR+G    A
Sbjct: 365 CLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEA 424

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
            +    M      P    Y  +I GLC   +  EA    + M+ + ++P       LA  
Sbjct: 425 SQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAES 484

Query: 611 --YCKID 615
             +C ID
Sbjct: 485 VCFCAID 491


>AT1G05600.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:1672161-1673675 FORWARD
           LENGTH=504
          Length = 504

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 165/404 (40%), Gaps = 78/404 (19%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHN--------------QGMVPNTQ----------- 181
           V   ++R+F+  GRL++A+ +   +H               Q MV  ++           
Sbjct: 83  VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142

Query: 182 -----------TLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGN 230
                       LNL+MK+ C++   D A  +F+EM+ +G +PD  SYR+++  +C  G 
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202

Query: 231 VLEADKWLSVML----DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLK---- 282
           + EA   L  M      +G   D   + +++   C+ G    A+    K    GLK    
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKR 262

Query: 283 ---------------------------------PNLINFTSMIEGLCKRGSIKQAFEMLE 309
                                            P L ++++M   L + G + +  E+L 
Sbjct: 263 CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLL 322

Query: 310 EMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRD 369
            M  +G++P  + + A +  LC+ G  ++A  +  K +   +  P V  Y  +I G C D
Sbjct: 323 AMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382

Query: 370 DKLNRAEMLLGRMKEQ-GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT 428
            K   A   L +M +Q   + N  TY TL+DG C+ G F  A  +M  M  +   P + T
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           Y+ ++ GLC   R  EA   L++     +  +   +  L    C
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486



 Score =  103 bits (257), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/463 (21%), Positives = 198/463 (42%), Gaps = 16/463 (3%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR--GVHPDSASYRVMVVAYCKMGNVLEAD 235
           P   T +L+ +I  +      A  LFEE   R      + + Y  M+    K   VLE  
Sbjct: 7   PRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMK 66

Query: 236 KWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
             +  M +      ++ F  +I  F   G    A+  F    +       ++F ++++ +
Sbjct: 67  YVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEM 126

Query: 296 CKRGSIKQAFEMLEEMVCQGWKPN--VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
            K   ++ A  +  +  C GW+ N  +     L+  LC+   ++ A ++F ++   +   
Sbjct: 127 VKESELEAACHIFRKY-CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEM-NYQGCY 184

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLL----GRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
           P+  +Y  ++ G+C + KL  A  LL     R+ ++G   +   Y  L+D  C AG  + 
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244

Query: 410 AFDLMNLMSREGF-SPNICTYNAIVDGLCKKGR--VQEAYKMLKDGFHNGLEADKVTYNI 466
           A +++  + R+G  +P  C Y+ I  G  +     ++   ++L +    G      +Y+ 
Sbjct: 245 AIEILGKILRKGLKAPKRC-YHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES-EMFFEEAVRF 525
           + ++  ++  + +   +   M   G +P    Y   +   CR  ++ E+  +  +E ++ 
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363

Query: 526 GFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH-GCVPDSIAYGTLISGLCKQSKLDE 584
             +PT   Y  +I G C +G    A+ +  +MS    CV +   Y TL+ GLC+  +  E
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423

Query: 585 ARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
           A  + + M+ K   P   T   +    C +D    A++ L+ +
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM 466



 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/427 (20%), Positives = 185/427 (43%), Gaps = 12/427 (2%)

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
           +Y+ E M         + +  ++  + + G + +A      + +   +  + SF  ++ E
Sbjct: 66  KYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQE 125

Query: 260 FCEKGFATRALRYFHKFSDMGLKPN--LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
             ++     A   F K+   G + N  +     +++ LC+      A ++ +EM  QG  
Sbjct: 126 MVKESELEAACHIFRKYC-YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCY 184

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKL---VRSENNKPNVLTYTAMINGYCRDDKLNR 374
           P+  ++  L+ G C +G  E+A  L   +   +  + +  +++ Y  +++  C   +++ 
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN--FERAFDLMNLMSREGFSPNICTYNAI 432
           A  +LG++  +GL      Y  +  GH ++ +   ER   L+      G  P + +Y+A+
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAM 304

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK-MAKSG 491
              L ++G++ E  ++L      G E     Y   +   C+   +K+A+++ +K M +  
Sbjct: 305 ATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGH 364

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEE-AVRFGFIPTKRTYTSMICGYCREGNLTMA 550
             P +  Y  LI   C + +  E+  + ++ + +   +  + TY +++ G CR+G    A
Sbjct: 365 CLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEA 424

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
            +    M      P    Y  +I GLC   +  EA    + M+ + ++P       LA  
Sbjct: 425 SQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAES 484

Query: 611 --YCKID 615
             +C ID
Sbjct: 485 VCFCAID 491


>AT3G22670.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:8017771-8019459 REVERSE
           LENGTH=562
          Length = 562

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 166/383 (43%), Gaps = 57/383 (14%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVY--THTALIDGLCKKGWTEKAFRLFLK 345
           + +M++ L K  +    +E++ EM        V   T + ++  L K G   KA   FL+
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLE 228

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAG 405
           + +S   K + +   ++++   +++ +  A  +  ++ +  + P+  T+  LI G CKA 
Sbjct: 229 MEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKAR 287

Query: 406 NFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYN 465
            F+ A  +M+LM    F+P++ TY + V+  CK+G  +   +ML++   NG   + VTY 
Sbjct: 288 KFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYT 347

Query: 466 ILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRF 525
           I++    K   + +AL ++ KM + G  PD   Y++LI +  +  R  ++   FE+    
Sbjct: 348 IVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQ 407

Query: 526 GFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH---GCVP------------------ 564
           G       Y +MI          MA++   RM D     C P                  
Sbjct: 408 GVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKM 467

Query: 565 -----------------DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
                            D   Y  LI GLC   K++EA   ++  + KG++P + T    
Sbjct: 468 KLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDST---- 523

Query: 608 AYEYCKIDDCCSAMVILDRLEKK 630
               CK+        ++D LEKK
Sbjct: 524 ----CKM--------LVDELEKK 534



 Score =  116 bits (290), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 148/318 (46%), Gaps = 6/318 (1%)

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+K + I   S+++ L K  SI+ A E+  ++     KP+  T   LI G CK    + A
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF-DTIKPDARTFNILIHGFCKARKFDDA 292

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            R  + L++     P+V+TYT+ +  YC++    R   +L  M+E G  PN  TYT ++ 
Sbjct: 293 -RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMH 351

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
              K+     A  +   M  +G  P+   Y++++  L K GR ++A ++ +D  + G+  
Sbjct: 352 SLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRR 411

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKS---GIQPDIHSYTTLIAVFCREKRMSESE 516
           D + YN +IS     +  + AL L  +M         P++ +Y  L+ + C +K+M    
Sbjct: 412 DVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLG 471

Query: 517 MFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
           +     V+        TY  +I G C  G +  A  FF      G VP       L+  L
Sbjct: 472 ILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDEL 531

Query: 577 CKQSKLDEARGLYDSMIE 594
            K++ + EA+    S+++
Sbjct: 532 EKKN-MAEAKLKIQSLVQ 548



 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 2/273 (0%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
           P+ +T N+++   C+    D A+ + + M      PD  +Y   V AYCK G+    ++ 
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330

Query: 238 LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCK 297
           L  M + G   +  ++T+++    +      AL  + K  + G  P+   ++S+I  L K
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390

Query: 298 RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN--KPN 355
            G  K A E+ E+M  QG + +V  +  +I         E A RL  ++   E     PN
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
           V TY  ++   C   K+    +LL  M +  +  + +TY  LI G C +G  E A     
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510

Query: 416 LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
              R+G  P   T   +VD L KK   +   K+
Sbjct: 511 EAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKI 543



 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 4/219 (1%)

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP--NICTYNAIVDGLCKKGR 441
           + G + + +TY  ++D   K  NF+  ++L+N M++   S    + T + ++  L K G+
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 218

Query: 442 VQEAYK-MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
             +A    L+     G++ D +  N L+    K+  I+ A  +F K+  + I+PD  ++ 
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFN 277

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
            LI  FC+ ++  ++    +      F P   TYTS +  YC+EG+     +    M ++
Sbjct: 278 ILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMREN 337

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           GC P+ + Y  ++  L K  ++ EA G+Y+ M E G +P
Sbjct: 338 GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVP 376


>AT1G19720.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr1:6819926-6822610 REVERSE
           LENGTH=894
          Length = 894

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 207/492 (42%), Gaps = 35/492 (7%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   ++  +A+ G L  A +    M  + ++      N V+   C+ G  + A  L +EM
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRERDVI----AWNSVLLAYCQNGKHEEAVELVKEM 273

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
              G+ P   ++ +++  Y ++G    A   +  M   G   D  ++T +IS     G  
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMR 333

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
            +AL  F K    G+ PN +   S +        I Q  E+    V  G+  +V    +L
Sbjct: 334 YQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSL 393

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           +D   K G  E A ++F     S  NK +V T+ +MI GYC+     +A  L  RM++  
Sbjct: 394 VDMYSKCGKLEDARKVF----DSVKNK-DVYTWNSMITGYCQAGYCGKAYELFTRMQDAN 448

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG-FSPNICTYNAIVDGLCKKGRVQEA 445
           L PN  T+ T+I G+ K G+   A DL   M ++G    N  T+N I+ G  + G+  EA
Sbjct: 449 LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY-TTLIA 504
            ++ +    +    + VT   L+         K    +   + +  +   IH+    L  
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA-IHAVKNALTD 567

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
            + +   +  S   F        I    T+ S+I GY   G+   A+  F++M   G  P
Sbjct: 568 TYAKSGDIEYSRTIFLGMETKDII----TWNSLIGGYVLHGSYGPALALFNQMKTQGITP 623

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMI-EKGLIPCEVTRITLAYEYCKIDDCCSAMVI 623
           +     ++I        +DE + ++ S+  +  +IP        A E+      CSAMV 
Sbjct: 624 NRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIP--------ALEH------CSAMVY 669

Query: 624 L----DRLEKKL 631
           L    +RLE+ L
Sbjct: 670 LYGRANRLEEAL 681



 Score =  113 bits (282), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/461 (22%), Positives = 192/461 (41%), Gaps = 48/461 (10%)

Query: 154 SFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHP 213
           ++ + G+ +EAVE+V EM  +G+ P   T N+++    ++G  D A  L ++M   G+  
Sbjct: 256 AYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA 315

Query: 214 DSASYRVMV----------------------------------VAYCKMGNVL-EADKWL 238
           D  ++  M+                                  V+ C    V+ +  +  
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
           S+ +  GF+ D      ++  + + G    A + F    +     ++  + SMI G C+ 
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQA 431

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
           G   +A+E+   M     +PN+ T   +I G  K G   +A  LF ++ +    + N  T
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           +  +I GY ++ K + A  L  +M+    +PN+ T  +L+         +   ++   + 
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL 551

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA-DKVTYNILISEHCKQADI 477
           R          NA+ D   K G ++ +  +       G+E  D +T+N LI  +      
Sbjct: 552 RRNLDAIHAVKNALTDTYAKSGDIEYSRTIFL-----GMETKDIITWNSLIGGYVLHGSY 606

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES-EMFFEEAVRFGFIPTKRTYTS 536
             ALALF++M   GI P+  + +++I        + E  ++F+  A  +  IP     ++
Sbjct: 607 GPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSA 666

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVP--DSIAYGTLISG 575
           M+  Y R   L  A++F   M+     P  +S   G  I G
Sbjct: 667 MVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHG 707



 Score =  104 bits (259), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/441 (20%), Positives = 181/441 (41%), Gaps = 11/441 (2%)

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
            C  G    A +        G K     +  ++E     GSI     +L        +P+
Sbjct: 56  LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLG-RILHARFGLFTEPD 114

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
           V+  T L+    K G    A ++F  +      + N+ T++AMI  Y R+++      L 
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSM-----RERNLFTWSAMIGAYSRENRWREVAKLF 169

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
             M + G++P+   +  ++ G    G+ E    + +++ + G S  +   N+I+    K 
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
           G +  A K     F    E D + +N ++  +C+    ++A+ L  +M K GI P + ++
Sbjct: 230 GELDFATKF----FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
             LI  + +  +   +    ++   FG      T+T+MI G    G    A+  F +M  
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345

Query: 560 HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCS 619
            G VP+++   + +S       +++   ++   ++ G I   +   +L   Y K      
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405

Query: 620 AMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACY 679
           A  + D ++ K  + T  +++   C     G A   F ++ D +   N +T    ++   
Sbjct: 406 ARKVFDSVKNKD-VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYI 464

Query: 680 ESNKYALVSDLSARIYKDNRL 700
           ++       DL  R+ KD ++
Sbjct: 465 KNGDEGEAMDLFQRMEKDGKV 485


>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
           superfamily protein | chr4:16599976-16605994 REVERSE
           LENGTH=1089
          Length = 1089

 Score =  123 bits (309), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/423 (19%), Positives = 196/423 (46%), Gaps = 7/423 (1%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           GR+K+ + ++ ++  + ++   +  +     AC+        + F ++    ++P  +++
Sbjct: 414 GRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLI---LNPTMSTF 470

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
            +++       ++  A   L ++ + G   D   +T +IS   + G        FH+ S+
Sbjct: 471 NMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSN 530

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
            G++ NL  F ++I+G  + G + +AF     +  +  KP+     ALI    + G  ++
Sbjct: 531 SGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDR 590

Query: 339 AFRLFLKLVRSENNK--PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT 396
           AF +  ++ ++E +   P+ ++  A++   C   ++ RA+ +   + + G+      YT 
Sbjct: 591 AFDVLAEM-KAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
            ++   K+G+++ A  +   M  +  +P+   ++A++D       + EA+ +L+D    G
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQG 709

Query: 457 LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE 516
           +    ++Y+ L+   C   D K+AL L+ K+    ++P I +   LI   C   ++ ++ 
Sbjct: 710 IRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAM 769

Query: 517 MFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
            + +E    G  P   TY+ ++    R+ +  ++ K   +    G  P+ I     I+ L
Sbjct: 770 EYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMC-RCITSL 828

Query: 577 CKQ 579
           CK+
Sbjct: 829 CKR 831



 Score =  106 bits (265), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/399 (21%), Positives = 172/399 (43%), Gaps = 13/399 (3%)

Query: 295 LCKRGSIKQAFEMLEEMVCQGW--KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN 352
           L + G IK    +LE++  +       +Y H +      K+   ++AFR F KL+ +   
Sbjct: 410 LLRDGRIKDCISLLEDLDQRDLLDMDKIY-HASFFKACKKQRAVKEAFR-FTKLILN--- 464

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
            P + T+  +++       +  A  +L  ++E G+  +   YTTLI    K+G  +  F+
Sbjct: 465 -PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFE 523

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           + + MS  G   N+ T+ A++DG  + G+V +A+          ++ D+V +N LIS   
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACG 583

Query: 473 KQADIKQALALFSKMAKS--GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPT 530
           +   + +A  + ++M      I PD  S   L+   C   ++  ++  ++   ++G   T
Sbjct: 584 QSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGT 643

Query: 531 KRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD 590
              YT  +    + G+   A   +  M +    PD + +  LI        LDEA G+  
Sbjct: 644 PEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQ 703

Query: 591 SMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK---KLWIRTATTLVRKLCSER 647
               +G+    ++  +L    C   D   A+ + ++++    +  I T   L+  LC   
Sbjct: 704 DAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGN 763

Query: 648 KVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYAL 686
           ++  A  +  ++  +    N +T +  M A    + + +
Sbjct: 764 QLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEV 802



 Score = 97.8 bits (242), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 157/355 (44%), Gaps = 11/355 (3%)

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
           RA++   +F+ + L P +  F  ++        I+ A  +L  +   G   +   +T LI
Sbjct: 450 RAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLI 509

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
               K G  +  F +F ++  S   + N+ T+ A+I+G  R  ++ +A    G ++ + +
Sbjct: 510 SSCAKSGKVDAMFEVFHQMSNS-GVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNV 568

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE--GFSPNICTYNAIVDGLCKKGRVQEA 445
            P+   +  LI    ++G  +RAFD++  M  E     P+  +  A++   C  G+V+ A
Sbjct: 569 KPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERA 628

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            ++ +     G+      Y I ++   K  D   A +++  M +  + PD   ++ LI V
Sbjct: 629 KEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDV 688

Query: 506 FCREKRMSESEMFFEEA----VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
               K + E+    ++A    +R G I    +Y+S++   C   +   A++ + ++    
Sbjct: 689 AGHAKMLDEAFGILQDAKSQGIRLGTI----SYSSLMGACCNAKDWKKALELYEKIKSIK 744

Query: 562 CVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD 616
             P       LI+ LC+ ++L +A    D +   GL P  +T   L     + DD
Sbjct: 745 LRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDD 799



 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 151/365 (41%), Gaps = 52/365 (14%)

Query: 124 FMRLYIVCATS-----------LIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMH 172
           F  L  VCA+S           L+    +    ++   ++ S A+ G++    E+  +M 
Sbjct: 470 FNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMS 529

Query: 173 NQGMVPNTQT-----------------------------------LNLVMKIACEMGLVD 197
           N G+  N  T                                    N ++    + G VD
Sbjct: 530 NSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVD 589

Query: 198 YAQYLFEEMSAR--GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
            A  +  EM A    + PD  S   ++ A C  G V  A +   ++   G       +T+
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
            ++   + G    A   +    +  + P+ + F+++I+       + +AF +L++   QG
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQG 709

Query: 316 WKPNVYTHTALIDGLCK-KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR 374
            +    ++++L+   C  K W +KA  L+ K ++S   +P + T  A+I   C  ++L +
Sbjct: 710 IRLGTISYSSLMGACCNAKDW-KKALELYEK-IKSIKLRPTISTMNALITALCEGNQLPK 767

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVD 434
           A   L  +K  GL PNT TY+ L+    +  +FE +F L++    +G SPN+     I  
Sbjct: 768 AMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCIT- 826

Query: 435 GLCKK 439
            LCK+
Sbjct: 827 SLCKR 831


>AT3G04130.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:1084136-1085662 FORWARD
           LENGTH=508
          Length = 508

 Score =  122 bits (306), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 41/368 (11%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++R FA  G  +EAV +   +   G+  NT+++NL++   C+   V+ A+ +  ++ +  
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH- 219

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P++ ++ + +  +CK   V EA   +  M   GF                        
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF------------------------ 255

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
                      +P +I++T++I   C++    + +EML EM   G  PN  T+T ++  L
Sbjct: 256 -----------RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSL 304

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG-RMKEQGLIP 389
             +   E+A R+  ++ RS   KP+ L Y  +I+   R  +L  AE +    M E G+  
Sbjct: 305 NAQKEFEEALRVATRMKRS-GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGF-SPNICTYNAIVDGLCKKGRVQEAYKM 448
           NT+TY ++I  +C     ++A +L+  M      +P++ TY  ++    K+G V E  K+
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423

Query: 449 LKDGF-HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           LK+    + L  D+ TY  LI   C+    + A  LF +M    I P  H    L+    
Sbjct: 424 LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR-HRTCLLLLEEV 482

Query: 508 REKRMSES 515
           ++K M ES
Sbjct: 483 KKKNMHES 490



 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 127/278 (45%), Gaps = 4/278 (1%)

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           + N  +   +++  C++ ++ +A ++L ++K   + PN +T+   I G CKA   E A  
Sbjct: 187 EKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALW 245

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
            +  M   GF P + +Y  I+   C++    + Y+ML +   NG   + +TY  ++S   
Sbjct: 246 TIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLN 305

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFE-EAVRFGFIPTK 531
            Q + ++AL + ++M +SG +PD   Y  LI    R  R+ E+E  F  E    G     
Sbjct: 306 AQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINT 365

Query: 532 RTYTSMICGYCREGNLTMAIKFFHRM-SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD 590
            TY SMI  YC       AI+    M S + C PD   Y  L+    K+  + E   L  
Sbjct: 366 STYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLK 425

Query: 591 SMIEKGLIPC-EVTRITLAYEYCKIDDCCSAMVILDRL 627
            M+ K  +   E T   L    C+ + C  A  + + +
Sbjct: 426 EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463



 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 137/325 (42%), Gaps = 40/325 (12%)

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
           LV   +   I+  F   G    A+  F +  + GL+ N  +   +++ LCK   ++QA  
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           +L ++      PN +T    I G CK    E+A    ++ ++    +P V++YT +I  Y
Sbjct: 212 VLLQLKSHI-TPNAHTFNIFIHGWCKANRVEEAL-WTIQEMKGHGFRPCVISYTTIIRCY 269

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
           C+  +  +   +L  M+  G  PN+ TYTT++        FE A  +   M R G  P+ 
Sbjct: 270 CQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS 329

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDGFHN-GLEADKVTYNILISEHCKQADIKQALALFS 485
             YN ++  L + GR++EA ++ +      G+  +  TYN +I+ +C   +  +A+ L  
Sbjct: 330 LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389

Query: 486 KMAKSGI-QPDIHSY------------------------------------TTLIAVFCR 508
           +M  S +  PD+H+Y                                    T LI   CR
Sbjct: 390 EMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRT 533
                 +   FEE +     P  RT
Sbjct: 450 ANMCEWAYCLFEEMISQDITPRHRT 474



 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 3/271 (1%)

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y   ++   +  K +R +  + RM+   L+   NT   ++     AG +E A  + + + 
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLV-TLNTVAKIMRRFAGAGEWEEAVGIFDRLG 182

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
             G   N  + N ++D LCK+ RV++A  +L     + +  +  T+NI I   CK   ++
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVE 241

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
           +AL    +M   G +P + SYTT+I  +C++    +      E    G  P   TYT+++
Sbjct: 242 EALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIM 301

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD-SMIEKGL 597
                +     A++   RM   GC PDS+ Y  LI  L +  +L+EA  ++   M E G+
Sbjct: 302 SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGV 361

Query: 598 IPCEVTRITLAYEYCKIDDCCSAMVILDRLE 628
                T  ++   YC  D+   A+ +L  +E
Sbjct: 362 SINTSTYNSMIAMYCHHDEEDKAIELLKEME 392



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 3/315 (0%)

Query: 136 IGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGL 195
           +G   L+K  E M  ++ +  +  R+++A  ++ ++ +  + PN  T N+ +   C+   
Sbjct: 181 LGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANR 239

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           V+ A +  +EM   G  P   SY  ++  YC+    ++  + LS M   G   ++ ++T 
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLE-EMVCQ 314
           I+S    +     ALR   +    G KP+ + +  +I  L + G +++A  +   EM   
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL 359

Query: 315 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMING-YCRDDKLN 373
           G   N  T+ ++I   C     +KA  L  ++  S    P+V TY  ++   + R D + 
Sbjct: 360 GVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVE 419

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
             ++L   + +  L  + +TYT LI   C+A   E A+ L   M  +  +P   T   ++
Sbjct: 420 VGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479

Query: 434 DGLCKKGRVQEAYKM 448
           + + KK   + A ++
Sbjct: 480 EEVKKKNMHESAERI 494


>AT3G04130.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:1084136-1085662 FORWARD
           LENGTH=508
          Length = 508

 Score =  122 bits (306), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 41/368 (11%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++R FA  G  +EAV +   +   G+  NT+++NL++   C+   V+ A+ +  ++ +  
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH- 219

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P++ ++ + +  +CK   V EA   +  M   GF                        
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF------------------------ 255

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
                      +P +I++T++I   C++    + +EML EM   G  PN  T+T ++  L
Sbjct: 256 -----------RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSL 304

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG-RMKEQGLIP 389
             +   E+A R+  ++ RS   KP+ L Y  +I+   R  +L  AE +    M E G+  
Sbjct: 305 NAQKEFEEALRVATRMKRS-GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGF-SPNICTYNAIVDGLCKKGRVQEAYKM 448
           NT+TY ++I  +C     ++A +L+  M      +P++ TY  ++    K+G V E  K+
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423

Query: 449 LKDGF-HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
           LK+    + L  D+ TY  LI   C+    + A  LF +M    I P  H    L+    
Sbjct: 424 LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR-HRTCLLLLEEV 482

Query: 508 REKRMSES 515
           ++K M ES
Sbjct: 483 KKKNMHES 490



 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 127/278 (45%), Gaps = 4/278 (1%)

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           + N  +   +++  C++ ++ +A ++L ++K   + PN +T+   I G CKA   E A  
Sbjct: 187 EKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALW 245

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
            +  M   GF P + +Y  I+   C++    + Y+ML +   NG   + +TY  ++S   
Sbjct: 246 TIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLN 305

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFE-EAVRFGFIPTK 531
            Q + ++AL + ++M +SG +PD   Y  LI    R  R+ E+E  F  E    G     
Sbjct: 306 AQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINT 365

Query: 532 RTYTSMICGYCREGNLTMAIKFFHRM-SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD 590
            TY SMI  YC       AI+    M S + C PD   Y  L+    K+  + E   L  
Sbjct: 366 STYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLK 425

Query: 591 SMIEKGLIPC-EVTRITLAYEYCKIDDCCSAMVILDRL 627
            M+ K  +   E T   L    C+ + C  A  + + +
Sbjct: 426 EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463



 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 137/325 (42%), Gaps = 40/325 (12%)

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
           LV   +   I+  F   G    A+  F +  + GL+ N  +   +++ LCK   ++QA  
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           +L ++      PN +T    I G CK    E+A    ++ ++    +P V++YT +I  Y
Sbjct: 212 VLLQLKSHI-TPNAHTFNIFIHGWCKANRVEEAL-WTIQEMKGHGFRPCVISYTTIIRCY 269

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
           C+  +  +   +L  M+  G  PN+ TYTT++        FE A  +   M R G  P+ 
Sbjct: 270 CQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS 329

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDGFHN-GLEADKVTYNILISEHCKQADIKQALALFS 485
             YN ++  L + GR++EA ++ +      G+  +  TYN +I+ +C   +  +A+ L  
Sbjct: 330 LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389

Query: 486 KMAKSGI-QPDIHSY------------------------------------TTLIAVFCR 508
           +M  S +  PD+H+Y                                    T LI   CR
Sbjct: 390 EMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRT 533
                 +   FEE +     P  RT
Sbjct: 450 ANMCEWAYCLFEEMISQDITPRHRT 474



 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 3/271 (1%)

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y   ++   +  K +R +  + RM+   L+   NT   ++     AG +E A  + + + 
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLV-TLNTVAKIMRRFAGAGEWEEAVGIFDRLG 182

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
             G   N  + N ++D LCK+ RV++A  +L     + +  +  T+NI I   CK   ++
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVE 241

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
           +AL    +M   G +P + SYTT+I  +C++    +      E    G  P   TYT+++
Sbjct: 242 EALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIM 301

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD-SMIEKGL 597
                +     A++   RM   GC PDS+ Y  LI  L +  +L+EA  ++   M E G+
Sbjct: 302 SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGV 361

Query: 598 IPCEVTRITLAYEYCKIDDCCSAMVILDRLE 628
                T  ++   YC  D+   A+ +L  +E
Sbjct: 362 SINTSTYNSMIAMYCHHDEEDKAIELLKEME 392



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 3/315 (0%)

Query: 136 IGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGL 195
           +G   L+K  E M  ++ +  +  R+++A  ++ ++ +  + PN  T N+ +   C+   
Sbjct: 181 LGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANR 239

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           V+ A +  +EM   G  P   SY  ++  YC+    ++  + LS M   G   ++ ++T 
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLE-EMVCQ 314
           I+S    +     ALR   +    G KP+ + +  +I  L + G +++A  +   EM   
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL 359

Query: 315 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMING-YCRDDKLN 373
           G   N  T+ ++I   C     +KA  L  ++  S    P+V TY  ++   + R D + 
Sbjct: 360 GVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVE 419

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
             ++L   + +  L  + +TYT LI   C+A   E A+ L   M  +  +P   T   ++
Sbjct: 420 VGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479

Query: 434 DGLCKKGRVQEAYKM 448
           + + KK   + A ++
Sbjct: 480 EEVKKKNMHESAERI 494


>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
           repeat-containing protein | chr4:9257985-9260093 FORWARD
           LENGTH=702
          Length = 702

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 156/317 (49%), Gaps = 4/317 (1%)

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS 277
           Y V +  + K  ++ +++K    ML+RG   DNA+FT IIS   + G   RA+ +F K S
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237

Query: 278 DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTE 337
             G +P+ +   +MI+   + G++  A  + +    + W+ +  T + LI      G  +
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
               ++ ++ ++   KPN++ Y  +I+   R  +  +A+++   +   G  PN +TY  L
Sbjct: 298 GCLNIYEEM-KALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR-VQEAYKMLKDGFH-N 455
           +  + +A   + A  +   M  +G S  +  YN ++  +C   R V EA+++ +D  +  
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCE 415

Query: 456 GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES 515
             + D  T++ LI+ +     + +A A   +M ++G +P +   T++I  + + K++ + 
Sbjct: 416 TCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDV 475

Query: 516 EMFFEEAVRFGFIPTKR 532
              F++ +  G  P  R
Sbjct: 476 VRTFDQVLELGITPDDR 492



 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 2/308 (0%)

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
           ++ + F +  + G+KP+   FT++I    + G  K+A E  E+M   G +P+  T  A+I
Sbjct: 193 KSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMI 252

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           D   + G  + A  L+ +  R+E  + + +T++ +I  Y      +    +   MK  G+
Sbjct: 253 DAYGRAGNVDMALSLYDR-ARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGV 311

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
            PN   Y  LID   +A    +A  +   +   GF+PN  TY A+V    +     +A  
Sbjct: 312 KPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALA 371

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAK-SGIQPDIHSYTTLIAVF 506
           + ++    GL    + YN L+S       + +A  +F  M       PD  ++++LI V+
Sbjct: 372 IYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVY 431

Query: 507 CREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS 566
               R+SE+E    +    GF PT    TS+I  Y +   +   ++ F ++ + G  PD 
Sbjct: 432 ACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491

Query: 567 IAYGTLIS 574
              G L++
Sbjct: 492 RFCGCLLN 499



 Score = 96.7 bits (239), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 2/245 (0%)

Query: 350 ENNKPN--VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
           E  KP+  V+ Y   +  + +   L ++E L   M E+G+ P+  T+TT+I    + G  
Sbjct: 167 ETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVP 226

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           +RA +    MS  G  P+  T  A++D   + G V  A  +           D VT++ L
Sbjct: 227 KRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTL 286

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           I  +    +    L ++ +M   G++P++  Y  LI    R KR  ++++ +++ +  GF
Sbjct: 287 IRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGF 346

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
            P   TY +++  Y R      A+  +  M + G     I Y TL+S       +DEA  
Sbjct: 347 TPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFE 406

Query: 588 LYDSM 592
           ++  M
Sbjct: 407 IFQDM 411



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 148/326 (45%), Gaps = 45/326 (13%)

Query: 141 LQKAHEVM--QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           ++ + EV+     ++ F +   L+++ ++  EM  +G+ P+  T   ++  A + G+   
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRG----FLVDNASFT 254
           A   FE+MS+ G  PD+ +   M+ AY + GNV   D  LS + DR     + +D  +F+
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNV---DMALS-LYDRARTEKWRIDAVTFS 284

Query: 255 LIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ 314
            +I  +   G     L  + +   +G+KPNL+ +  +I+ + +     QA  + ++++  
Sbjct: 285 TLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITN 344

Query: 315 GWKPNVYTHTALI----------DGLC------KKG-------------------WTEKA 339
           G+ PN  T+ AL+          D L       +KG                   + ++A
Sbjct: 345 GFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEA 404

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           F +F  +   E   P+  T++++I  Y    +++ AE  L +M+E G  P     T++I 
Sbjct: 405 FEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQ 464

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPN 425
            + KA   +      + +   G +P+
Sbjct: 465 CYGKAKQVDDVVRTFDQVLELGITPD 490



 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 66/138 (47%)

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
           + YN+ +    K  D++++  LF +M + GI+PD  ++TT+I+   +      +  +FE+
Sbjct: 176 ILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEK 235

Query: 522 AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
              FG  P   T  +MI  Y R GN+ MA+  + R        D++ + TLI        
Sbjct: 236 MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGN 295

Query: 582 LDEARGLYDSMIEKGLIP 599
            D    +Y+ M   G+ P
Sbjct: 296 YDGCLNIYEEMKALGVKP 313



 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 92/218 (42%)

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           L NL+     S  +  YN  +    K   ++++ K+  +    G++ D  T+  +IS   
Sbjct: 162 LNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           +    K+A+  F KM+  G +PD  +   +I  + R   +  +   ++ A    +     
Sbjct: 222 QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAV 281

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           T++++I  Y   GN    +  +  M   G  P+ + Y  LI  + +  +  +A+ +Y  +
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341

Query: 593 IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
           I  G  P   T   L   Y +      A+ I   +++K
Sbjct: 342 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEK 379


>AT1G55630.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:20791817-20793250 REVERSE
           LENGTH=477
          Length = 477

 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 1/298 (0%)

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
           G  K    +++EM+  G+     T   LI    + G        F+K  ++ N +P   +
Sbjct: 166 GEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIK-SKTFNYRPYKHS 224

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           Y A+++      +    + +  +M E G  P+  TY  ++  + + G  +R + L++ M 
Sbjct: 225 YNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMV 284

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
           ++GFSP++ TYN ++  L    +   A  +L      G+E   + +  LI    +   ++
Sbjct: 285 KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE 344

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
                  +  K G  PD+  YT +I  +     + ++E  F+E    G +P   TY SMI
Sbjct: 345 ACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMI 404

Query: 539 CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
            G+C  G    A      M   GC P+ + Y TL++ L    K+ EA  +   M+EKG
Sbjct: 405 RGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462



 Score =  119 bits (299), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 149/330 (45%), Gaps = 16/330 (4%)

Query: 107 VALSFFHWAIGYSRFRH-------FMRLYIVC----ATSLIGNGNLQKAHEVMQC----M 151
           +A  FF W  G   FRH        M+++  C    A   + +  ++  +    C    +
Sbjct: 134 LAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 193

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           + +  E G  ++ VE   +       P   + N ++     +       +++E+M   G 
Sbjct: 194 ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGF 253

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
            PD  +Y +++ A  ++G      + L  M+  GF  D  ++ +++           AL 
Sbjct: 254 TPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALN 313

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
             +   ++G++P +I+FT++I+GL + G ++     ++E V  G  P+V  +T +I G  
Sbjct: 314 LLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYI 373

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
             G  EKA  +F K +  +   PNV TY +MI G+C   K   A  LL  M+ +G  PN 
Sbjct: 374 SGGELEKAEEMF-KEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNF 432

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
             Y+TL++    AG    A +++  M  +G
Sbjct: 433 VVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462



 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 1/226 (0%)

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           M  +GF+P++ TYN ++    + G+    Y++L +   +G   D  TYNIL+        
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
              AL L + M + G++P +  +TTLI    R  ++   + F +E V+ G  P    YT 
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           MI GY   G L  A + F  M++ G +P+   Y ++I G C   K  EA  L   M  +G
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427

Query: 597 LIPCEVTRITLAYEYCKIDDCCSAM-VILDRLEKKLWIRTATTLVR 641
             P  V   TL            A  V+ D +EK  ++   + L +
Sbjct: 428 CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKK 473



 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/208 (20%), Positives = 84/208 (40%)

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
           N Y  L+    + G ++    L++ M ++G+    CT+N ++    + G  ++  +    
Sbjct: 153 NCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIK 212

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
                    K +YN ++         K    ++ +M + G  PD+ +Y  ++    R  +
Sbjct: 213 SKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGK 272

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
                   +E V+ GF P   TY  ++           A+   + M + G  P  I + T
Sbjct: 273 TDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT 332

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIP 599
           LI GL +  KL+  +   D  ++ G  P
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTP 360



 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 51/98 (52%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+  +   G L++A EM  EM  +G +PN  T N +++  C  G    A  L +EM +RG
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLV 248
            +P+   Y  +V      G VLEA + +  M+++G  V
Sbjct: 428 CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYV 465


>AT1G56690.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:21253817-21255931 FORWARD
           LENGTH=704
          Length = 704

 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 193/414 (46%), Gaps = 37/414 (8%)

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF 253
           GL   A+ LF+EMS R V     S+  +V  Y K   ++EA     +M +R  +    S+
Sbjct: 62  GLPKEARQLFDEMSERNV----VSWNGLVSGYIKNRMIVEARNVFELMPERNVV----SW 113

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
           T ++  + ++G    A   F +  +     N +++T M  GL   G I +A ++ + M  
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMMPV 169

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
           +    +V   T +I GLC++G  ++A     +L+  E  + NV+T+T MI GY ++++++
Sbjct: 170 K----DVVASTNMIGGLCREGRVDEA-----RLIFDEMRERNVVTWTTMITGYRQNNRVD 220

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
            A  L   M E+  +    ++T+++ G+  +G  E A +   +M      P I   NA++
Sbjct: 221 VARKLFEVMPEKTEV----SWTSMLLGYTLSGRIEDAEEFFEVMP---MKPVIAC-NAMI 272

Query: 434 DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ 493
            G  + G + +A ++    F    + D  T+  +I  + ++    +AL LF++M K G++
Sbjct: 273 VGFGEVGEISKARRV----FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328

Query: 494 PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKF 553
           P   S  ++++V      +          VR  F       + ++  Y + G L  A   
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388

Query: 554 FHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           F R S      D I + ++ISG       +EA  ++  M   G +P +VT I +
Sbjct: 389 FDRFSSK----DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAI 438



 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 21/192 (10%)

Query: 426 ICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFS 485
           I ++N+IV G    G  +EA ++    F    E + V++N L+S + K   I +A  +F 
Sbjct: 48  IGSWNSIVSGYFSNGLPKEARQL----FDEMSERNVVSWNGLVSGYIKNRMIVEARNVFE 103

Query: 486 KMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR--TYTSMICGYCR 543
            M     + ++ S+T ++  + +E  + E+E  F        +P +   ++T M  G   
Sbjct: 104 LMP----ERNVVSWTAMVKGYMQEGMVGEAESLFWR------MPERNEVSWTVMFGGLID 153

Query: 544 EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
           +G +  A K +  M     V D +A   +I GLC++ ++DEAR ++D M E+ ++    T
Sbjct: 154 DGRIDKARKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTW-TT 208

Query: 604 RITLAYEYCKID 615
            IT   +  ++D
Sbjct: 209 MITGYRQNNRVD 220



 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 14/256 (5%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
             M+  F E+G + +A  +   M ++    +  T   ++K     G    A  LF +M  
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQK 324

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF-TLIISEFCEKGFAT 267
           +GV P   S  + +++ C     L+  + +   L R    D+    +++++ + + G   
Sbjct: 325 QGVRPSFPSL-ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
           +A   F +FS      ++I + S+I G    G  ++A ++  EM   G  PN  T  A++
Sbjct: 384 KAKLVFDRFSS----KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAIL 439

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
                 G  E+   +F  +       P V  Y+  ++   R  ++++A  L+  M    +
Sbjct: 440 TACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT---I 496

Query: 388 IPNTNTYTTLIDGHCK 403
            P+   +  L+ G CK
Sbjct: 497 KPDATVWGALL-GACK 511


>AT5G15280.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:4962293-4965976 FORWARD
           LENGTH=1227
          Length = 1227

 Score =  120 bits (300), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 177/384 (46%), Gaps = 44/384 (11%)

Query: 302 KQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV--RSENNKPNVLTY 359
           ++A  + + M  +G  P    +  LID L +   TE A+R+ L  V  R+E N  N+ + 
Sbjct: 200 RKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSI 259

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
             +I   C D K+  A +L  ++   G I N++ Y+ +  G+ +  +FE   DL++ +  
Sbjct: 260 GKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFE---DLLSFIGE 316

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
             + P++   N I+  LC++   + AY  +++  H G + D+VT+ ILI   C + DIK+
Sbjct: 317 VKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKR 376

Query: 480 ALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMIC 539
           A+   S++   G +PD++SY  +++   R+     +    +E    G + +  T+  M+ 
Sbjct: 377 AVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVT 436

Query: 540 GYCREGNLTMAIKFFHRMSDHGCVP-----------------DSIA-------------- 568
           GYC+      A +  ++M  +G +                  D +A              
Sbjct: 437 GYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKA 496

Query: 569 --YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD- 625
             +  L +GL   + LD      + ++++ ++P   + I  A E     D  +A+ +LD 
Sbjct: 497 EFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASED---GDLQTALRLLDE 553

Query: 626 --RLEKKLWIRTATTLVRKLCSER 647
             R  +KL  R+   L+R LC+ R
Sbjct: 554 MARWGQKLSRRSFAVLMRSLCASR 577



 Score =  110 bits (274), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 111/521 (21%), Positives = 224/521 (42%), Gaps = 46/521 (8%)

Query: 179 NTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL 238
           N  ++  V+++ C    V  A+ L  ++ A G   +S+ Y  + + Y +  +    +  L
Sbjct: 255 NIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDF---EDLL 311

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
           S + +  +  D      I+   C +  + RA  Y  +   +G K + + F  +I   C  
Sbjct: 312 SFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYE 371

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
           G IK+A   L E++ +G+KP+VY++ A++ GL +KG  +      L  ++      ++ T
Sbjct: 372 GDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHT-HCILDEMKENGMMLSLST 430

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAG------------- 405
           +  M+ GYC+  +   A+ ++ +M   GLI  +     L +     G             
Sbjct: 431 FKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDND 490

Query: 406 -NFERA--FDLM-----------------NLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
             F +A  FD +                 N++      P    +N+++    + G +Q A
Sbjct: 491 STFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTA 547

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHC-KQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
            ++L +    G +  + ++ +L+   C  +A ++ +++L  K  K   Q D  +   L+ 
Sbjct: 548 LRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQ 607

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
            +C++     S++ F + V+        TYTS+I  +C++  L   +  +    +   +P
Sbjct: 608 EYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLP 667

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSM-IEKGLIPCEVTRITLAYEYCKIDDCCSAMVI 623
           D    G L + L ++  ++E   L++ + I   L   E  RI    +   +   C A  +
Sbjct: 668 DLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRI-FVEKLTVLGFSCIAHSV 726

Query: 624 LDRLEKKLWI---RTATTLVRKLCSERKVGMAALFFHKLLD 661
           + RLE +  I        L++ LC+E+K   A     ++LD
Sbjct: 727 VKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLD 767



 Score =  105 bits (263), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 132/288 (45%), Gaps = 4/288 (1%)

Query: 218  YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS 277
            Y +++    +  N LE +K L  M  RG L D  +F  ++  +      + +LRY     
Sbjct: 912  YNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMI 971

Query: 278  DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK-PNVYTHTALIDGLCKKGWT 336
              G+KPN  +  ++   LC  G +K+A ++ + M  +GW   +    T +++ L  KG  
Sbjct: 972  SKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEI 1031

Query: 337  EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT 396
             KA     ++ R+    PN   Y  +I        L+ A  LL  M +   IP +++Y +
Sbjct: 1032 PKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDS 1088

Query: 397  LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
            +I+G  +    ++A D    M   G SP+I T++ +V   C+  +V E+ +++K     G
Sbjct: 1089 VINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLG 1148

Query: 457  LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
                +  +  +I     + +  +A  +   M K G + D  ++ +LI+
Sbjct: 1149 ESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLIS 1196



 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/503 (20%), Positives = 190/503 (37%), Gaps = 52/503 (10%)

Query: 151  MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
            ++R F +   L + + +     N   +P+      +       GLV+    LFE +    
Sbjct: 640  LIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISY 699

Query: 211  VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
                S + R+ V     +G    A   +  +   G +V+   +  +I   C +   + A 
Sbjct: 700  PLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAF 759

Query: 271  RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
                +  D    P+L +   +I  LC+      AF + E++       + Y H ALI GL
Sbjct: 760  AILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQI------DSSYVHYALIKGL 813

Query: 331  CKKGW---TEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
               G     E   R+ L    S  NK     Y  M  GYC+ +   + E +LG M  + +
Sbjct: 814  SLAGKMLDAENQLRIMLSNGLSSYNK----IYNVMFQGYCKGNNWMKVEEVLGLMVRKNI 869

Query: 388  IPNTNTYTTLIDGHC------------------------------------KAGNFERAF 411
            I +  +Y   +   C                                    +A N     
Sbjct: 870  ICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVN 929

Query: 412  DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEH 471
             ++  M   G  P+  T+N +V G         + + L      G++ +  +   + S  
Sbjct: 930  KVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSL 989

Query: 472  CKQADIKQALALFSKMAKSGIQPDIHSYTT-LIAVFCREKRMSESEMFFEEAVRFGFIPT 530
            C   D+K+AL L+  M   G         T ++     +  + ++E F     R G +  
Sbjct: 990  CDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP 1049

Query: 531  KRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD 590
               Y ++I      GNL +A+   + M  +  +P S +Y ++I+GL + ++LD+A   + 
Sbjct: 1050 --NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHT 1107

Query: 591  SMIEKGLIPCEVTRITLAYEYCK 613
             M+E GL P   T   L +++C+
Sbjct: 1108 EMVELGLSPSISTWSGLVHKFCE 1130



 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/489 (19%), Positives = 196/489 (40%), Gaps = 46/489 (9%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
           P+    N ++   C     + A    EE+   G   D  ++ +++   C  G++  A  +
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380

Query: 238 LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCK 297
           LS ++ +G+  D  S+  I+S    KG          +  + G+  +L  F  M+ G CK
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440

Query: 298 RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK--PN 355
               ++A  ++ +M   G          L +     G+   A RL     + +N+     
Sbjct: 441 ARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRL-----KRDNDSTFSK 495

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
              +  + NG      L+  E  +  + ++ ++P  N   +LI    + G+ + A  L++
Sbjct: 496 AEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFN---SLIVRASEDGDLQTALRLLD 552

Query: 416 LMSREGFSPNICTYNAIVDGLC-KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
            M+R G   +  ++  ++  LC  +  ++ +  +L+       + D  T N L+ E+CK+
Sbjct: 553 EMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKK 612

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
              + +  +F KM +     D  +YT+LI  FC+++ +++    +  A    ++P     
Sbjct: 613 GFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDC 672

Query: 535 TSMICGYCREGNLTMAIKFFH-----------------------------------RMSD 559
             +     R+G +   ++ F                                    R+  
Sbjct: 673 GDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEG 732

Query: 560 HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCS 619
            GC+ +   Y  LI GLC + K   A  + D M++K  IP   + + L    C+ +   +
Sbjct: 733 EGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGT 792

Query: 620 AMVILDRLE 628
           A  + ++++
Sbjct: 793 AFNLAEQID 801



 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 118/537 (21%), Positives = 212/537 (39%), Gaps = 71/537 (13%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G +K AV  + E+ ++G  P+  + N ++      GL  +   + +EM   G+    +++
Sbjct: 372 GDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTF 431

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE-FCEKGFATRALRY----- 272
           ++MV  YCK     EA + ++ M   G L++ +     +SE F   GF   A+R      
Sbjct: 432 KIMVTGYCKARQFEEAKRIVNKMFGYG-LIEASKVEDPLSEAFSLVGFDPLAVRLKRDND 490

Query: 273 --FHK---FSDMG-------------LKPNLI-------NFTSMIEGLCKRGSIKQAFEM 307
             F K   F D+G              + N++        F S+I    + G ++ A  +
Sbjct: 491 STFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRL 550

Query: 308 LEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTA------ 361
           L+EM   G K +  +   L+  LC       A R  L++  S   K   L Y        
Sbjct: 551 LDEMARWGQKLSRRSFAVLMRSLC-------ASRAHLRVSISLLEKWPKLAYQLDGETLN 603

Query: 362 -MINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE 420
            ++  YC+      ++++  +M +     +  TYT+LI   CK        ++      +
Sbjct: 604 FLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQND 663

Query: 421 GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
            + P++     + + L +KG V+E  ++ +  F        ++Y +  SE C+    K  
Sbjct: 664 NWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVF--------ISYPLSQSEACRIFVEKLT 715

Query: 481 LALFSKMAKS--------GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           +  FS +A S        G   +   Y  LI   C EK+ S +    +E +    IP+  
Sbjct: 716 VLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLG 775

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           +   +I   CR      A     +      +  S  +  LI GL    K+ +A      M
Sbjct: 776 SCLMLIPRLCRANKAGTAFNLAEQ------IDSSYVHYALIKGLSLAGKMLDAENQLRIM 829

Query: 593 IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWI---RTATTLVRKLCSE 646
           +  GL         +   YCK ++      +L  + +K  I   ++    VRK+C E
Sbjct: 830 LSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLE 886



 Score = 86.7 bits (213), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 159/368 (43%), Gaps = 16/368 (4%)

Query: 271 RYFHKFSDMGLKP-NLINFTSMIEGLCKRGSI-----KQAFEMLE--EMVCQGWKPNVYT 322
           R F +F   GLKP +++  +   E   +RG I     +  +E+     +  QG+K     
Sbjct: 92  RRFRRFP--GLKPEDVLELSLGFESELQRGGIGNIKVQALWEIFRWASVQYQGFKHLPQA 149

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
              +   L ++G  ++   L +++ R  +   N   +  +I  Y  D    +A ML   M
Sbjct: 150 CEIMASMLIREGMVKEVELLLMEMERHGDTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWM 209

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFD--LMNLMSREGFSP-NICTYNAIVDGLCKK 439
           + +GL+P T+ Y  LID   +    E A+   L  + +R   +  NI +   +++ LC  
Sbjct: 210 RRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLD 269

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
            +VQEA  + +     G   +   Y+ +   + ++ D +  L+   ++     +PD+   
Sbjct: 270 QKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVK---YEPDVFVG 326

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
             ++   CR      + ++ EE    GF   + T+  +I   C EG++  A+ +   +  
Sbjct: 327 NRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMS 386

Query: 560 HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCS 619
            G  PD  +Y  ++SGL ++        + D M E G++    T   +   YCK      
Sbjct: 387 KGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEE 446

Query: 620 AMVILDRL 627
           A  I++++
Sbjct: 447 AKRIVNKM 454



 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/375 (20%), Positives = 166/375 (44%), Gaps = 9/375 (2%)

Query: 206  MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFC--EK 263
            M + G+   +  Y VM   YCK  N ++ ++ L +M+ +  +    S+   + + C   +
Sbjct: 829  MLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQ 888

Query: 264  GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
              +  +L+ F    +      +I +  +I  + +  +  +  ++L EM  +G  P+  T 
Sbjct: 889  SLSAISLKEFLLLGESN-PGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTF 947

Query: 324  TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
              L+ G         + R +L  + S+  KPN  +  A+ +  C +  + +A  L   M+
Sbjct: 948  NFLVHGYSSSADYSSSLR-YLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVME 1006

Query: 384  EQGL-IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGF-SPNICTYNAIVDGLCKKGR 441
             +G  + ++   T +++     G   +A D +  ++R G  +PN   Y+ I+  L  +G 
Sbjct: 1007 SKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGN 1063

Query: 442  VQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTT 501
            +  A  +L     N       +Y+ +I+   +   + +A+   ++M + G+ P I +++ 
Sbjct: 1064 LDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSG 1123

Query: 502  LIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
            L+  FC   ++ ESE   +  V  G  P++  + ++I  +  E N   A +    M   G
Sbjct: 1124 LVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCG 1183

Query: 562  CVPDSIAYGTLISGL 576
               D   + +LIS +
Sbjct: 1184 YEVDFETHWSLISNM 1198



 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 130/281 (46%), Gaps = 8/281 (2%)

Query: 205  EMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKG 264
            EM  RGV PD  ++  +V  Y    +   + ++LS M+ +G   +N S   + S  C+ G
Sbjct: 934  EMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNG 993

Query: 265  FATRALRYFHKFSDMG--LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW-KPNVY 321
               +AL  +      G  L  +++  T ++E L  +G I +A + L  +   G   PN  
Sbjct: 994  DVKKALDLWQVMESKGWNLGSSVVQ-TKIVETLISKGEIPKAEDFLTRVTRNGMMAPN-- 1050

Query: 322  THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
             +  +I  L  +G  + A  L   ++++++  P   +Y ++ING  R ++L++A      
Sbjct: 1051 -YDNIIKKLSDRGNLDIAVHLLNTMLKNQS-IPGSSSYDSVINGLLRYNQLDKAMDFHTE 1108

Query: 382  MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
            M E GL P+ +T++ L+   C+A     +  L+  M   G SP+   +  ++D    +  
Sbjct: 1109 MVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKN 1168

Query: 442  VQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALA 482
              +A +M++     G E D  T+  LIS      + K   A
Sbjct: 1169 TVKASEMMEMMQKCGYEVDFETHWSLISNMSSSKEKKTTTA 1209



 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 105/237 (44%), Gaps = 18/237 (7%)

Query: 132  ATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTL-------- 183
             +SL  NG+++KA ++ Q M      +G      ++V  + ++G +P  +          
Sbjct: 986  TSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNG 1045

Query: 184  -------NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADK 236
                   N++ K++ + G +D A +L   M      P S+SY  ++    +   + +A  
Sbjct: 1046 MMAPNYDNIIKKLS-DRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMD 1104

Query: 237  WLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLC 296
            + + M++ G     ++++ ++ +FCE      + R       +G  P+   F ++I+   
Sbjct: 1105 FHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFR 1164

Query: 297  KRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL--CKKGWTEKAFRLFLKLVRSEN 351
               +  +A EM+E M   G++ +  TH +LI  +   K+  T  A   FL  + S N
Sbjct: 1165 VEKNTVKASEMMEMMQKCGYEVDFETHWSLISNMSSSKEKKTTTAGEGFLSRLLSGN 1221


>AT4G01030.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr4:448336-450642 REVERSE LENGTH=768
          Length = 768

 Score =  119 bits (298), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 106/471 (22%), Positives = 200/471 (42%), Gaps = 80/471 (16%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           G+  N    N ++ +    G ++ ++ +F  M  R +    +S+  ++ +Y K+G V +A
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNL----SSWNSILSSYTKLGYVDDA 174

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
              L  M   G   D  ++  ++S +  KG +  A+    +    GLKP+  + +S+++ 
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
           + + G +K    +   ++      +VY  T LID   K G+   A     ++V    +  
Sbjct: 235 VAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA-----RMVFDMMDAK 289

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           N++ + ++++G      L  AE L+ RM+++G+ P+  T+ +L  G+   G  E+A D++
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAY----KMLKDG------------------ 452
             M  +G +PN+ ++ AI  G  K G  + A     KM ++G                  
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409

Query: 453 --FHNGLEA-----------DKVTYNILISEHCKQADIKQA------------------- 480
              H+G E            D      L+  + K  D++ A                   
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCML 469

Query: 481 ------------LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFE-EAVRFGF 527
                       +A FS M ++G++PD  ++T++++V      + E   +F+    R+G 
Sbjct: 470 MGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGI 529

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
           IPT    + M+    R G L  A  F   MS     PD+  +G  +S  CK
Sbjct: 530 IPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS---LKPDATIWGAFLSS-CK 576



 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 113/503 (22%), Positives = 206/503 (40%), Gaps = 55/503 (10%)

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHP-DSASYRVMVVAYCKMGNVLEADKWLSVML 242
           N ++ +    G  + A  LF EM   G    DS   +++ V   K G   E  +    +L
Sbjct: 58  NEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEG-FAEGRQIHGYVL 116

Query: 243 DRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIK 302
             G   + +    +I  +   G    + + F+   D     NL ++ S++    K G + 
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD----RNLSSWNSILSSYTKLGYVD 172

Query: 303 QAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM 362
            A  +L+EM   G KP++ T  +L+ G   KG ++ A  + LK ++    KP+  + +++
Sbjct: 173 DAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV-LKRMQIAGLKPSTSSISSL 231

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA---FDLMNLMSR 419
           +        L   + + G +    L  +    TTLID + K G    A   FD+M+    
Sbjct: 232 LQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD---- 287

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
              + NI  +N++V GL     +++A  ++      G++ D +T+N L S +      ++
Sbjct: 288 ---AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344

Query: 480 ALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMIC 539
           AL +  KM + G+ P++ S+T   A+F                                 
Sbjct: 345 ALDVIGKMKEKGVAPNVVSWT---AIFS-------------------------------- 369

Query: 540 GYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           G  + GN   A+K F +M + G  P++    TL+  L   S L   + ++   + K LI 
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429

Query: 600 CEVTRITLAYEYCKIDDCCSAMVILDRLEKK-LWIRTATTLVRKLCSERKVGMAALFFHK 658
                  L   Y K  D  SA+ I   ++ K L       +   +    + G+AA  F  
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAA--FSV 487

Query: 659 LLDMDFHVNRVTLAAFMTACYES 681
           +L+     + +T  + ++ C  S
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNS 510



 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 97/469 (20%), Positives = 185/469 (39%), Gaps = 73/469 (15%)

Query: 161 LKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRV 220
           LK+A  ++  M  +G+ P+  T N +      +G  + A  +  +M  +GV P+  S+  
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW-- 364

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
                                            T I S   + G    AL+ F K  + G
Sbjct: 365 ---------------------------------TAIFSGCSKNGNFRNALKVFIKMQEEG 391

Query: 281 LKPNLINFTSMIE-----GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGW 335
           + PN    +++++      L   G     F + + ++C     + Y  TAL+D   K G 
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC-----DAYVATALVDMYGKSGD 446

Query: 336 TEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYT 395
            + A  +F  +     NK ++ ++  M+ GY    +          M E G+ P+  T+T
Sbjct: 447 LQSAIEIFWGI----KNK-SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFT 501

Query: 396 TLIDGHCKAGNFERAFDLMNLM-SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
           +++     +G  +  +   +LM SR G  P I   + +VD L + G + EA+  ++    
Sbjct: 502 SVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQT--- 558

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP-DIHSYTTLIAVFCREKRMS 513
             L+ D   +   +S      D++ A   + ++    ++P +  +Y  +I ++    R  
Sbjct: 559 MSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQV--LEPHNSANYMMMINLYSNLNRWE 616

Query: 514 ESE----MFFEEAVR----FGFIPTKRT---YTSMICGYCREGNLTMAI-KFFHRMSDHG 561
           + E    +     VR    + +I   +T   + +    +  EG++   + K    M   G
Sbjct: 617 DVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSG 676

Query: 562 CVPDSIAYGTLISGLCKQSKL----DEARGLYDSMIEKGLIPCEVTRIT 606
            VPD+      IS   K+  L    ++    Y  + +KGL P  V + T
Sbjct: 677 YVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNT 725



 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 80/391 (20%), Positives = 165/391 (42%), Gaps = 47/391 (12%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G  + A+++  +M  +G+ PN  T++ ++KI   + L+   + +      + +  D+   
Sbjct: 375 GNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA 434

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
             +V  Y K G++  A +    + ++      AS+  ++  +   G     +  F    +
Sbjct: 435 TALVDMYGKSGDLQSAIEIFWGIKNKSL----ASWNCMLMGYAMFGRGEEGIAAFSVMLE 490

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ-GWKPNVYTHTALIDGLCKKGWTE 337
            G++P+ I FTS++      G +++ ++  + M  + G  P +   + ++D L + G+ +
Sbjct: 491 AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLD 550

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP-NTNTYTT 396
           +A+      +++ + KP+   + A ++       L  AE+   R+  Q L P N+  Y  
Sbjct: 551 EAW----DFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRL--QVLEPHNSANYMM 604

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
           +I+ +     +E    + NLM                     + RVQ+ +          
Sbjct: 605 MINLYSNLNRWEDVERIRNLMRN------------------NRVRVQDLWSW-------- 638

Query: 457 LEADKVTYNILISE---HCKQADIKQAL-ALFSKMAKSGIQPDIHSYTTLIAVFCREK-R 511
           ++ D+ T +I  +E   H  + DI   L  L S+M KSG  PD       I+   +EK  
Sbjct: 639 IQIDQ-TVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLL 697

Query: 512 MSESE---MFFEEAVRFGFIPTKRTYTSMIC 539
           M  +E   M +    + G  P +    + IC
Sbjct: 698 MGHTEKLAMTYGLIKKKGLAPIRVVKNTNIC 728


>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
           chr1:22997826-22999796 REVERSE LENGTH=656
          Length = 656

 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 195/449 (43%), Gaps = 81/449 (18%)

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT 254
            ++ A+ LF+EM +R    DS S+  M+  Y K   + EA      M +R    +  S++
Sbjct: 120 FLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWS 171

Query: 255 LIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM--V 312
            +I+ FC+ G    A+  F K       P      +++ GL K   + +A  +L +   +
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSL 227

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVR----------SENNKPNVLTYTAM 362
             G +  VY +  LI G  ++G  E A  LF ++             E    NV+++ +M
Sbjct: 228 VSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSM 287

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM-SREG 421
           I  Y +   +  A +L  +MK++    +T ++ T+IDG+      E AF L + M +R+ 
Sbjct: 288 IKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDA 343

Query: 422 FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQAL 481
            S     +N +V G    G V+ A    +  F    E   V++N +I+ + K  D K+A+
Sbjct: 344 HS-----WNMMVSGYASVGNVELA----RHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAV 394

Query: 482 ALFSKMAKSGIQPDIHSYTTL----------------------------------IAVFC 507
            LF +M   G +PD H+ T+L                                  I ++ 
Sbjct: 395 DLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYS 454

Query: 508 REKRMSESEMFFEEAVRFGFIPTKR---TYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
           R   + ES   F+E      +  KR   T+ +MI GY   GN + A+  F  M  +G  P
Sbjct: 455 RCGEIMESRRIFDE------MKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYP 508

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMI 593
             I + ++++       +DEA+  + SM+
Sbjct: 509 SHITFVSVLNACAHAGLVDEAKAQFVSMM 537



 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 168/389 (43%), Gaps = 56/389 (14%)

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           ++ + + G+  +A  +F KL        N +T+  MI+GY +  ++N+A  L   M ++ 
Sbjct: 47  LNQMIRSGYIAEARDIFEKL-----EARNTVTWNTMISGYVKRREMNQARKLFDVMPKRD 101

Query: 387 LIPNTNTYTTLIDGHCKAGN---FERAFDLMNLM-SREGFSPNICTYNAIVDGLCKKGRV 442
           ++    T+ T+I G+   G     E A  L + M SR+ FS     +N ++ G  K  R+
Sbjct: 102 VV----TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFS-----WNTMISGYAKNRRI 152

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
            EA  +    F    E + V+++ +I+  C+  ++  A+ LF KM      P       L
Sbjct: 153 GEALLL----FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCAL 204

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKR-----TYTSMICGYCREGNLTMAIKFFHRM 557
           +A   + +R+SE+     +   +G + + R      Y ++I GY + G +  A   F ++
Sbjct: 205 VAGLIKNERLSEAAWVLGQ---YGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI 261

Query: 558 -----SDHGC------VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRIT 606
                 DHG         + +++ ++I    K   +  AR L+D M ++  I    T I 
Sbjct: 262 PDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWN-TMID 320

Query: 607 LAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHV 666
                 +++D  +    +   +   W      +V    S   V +A  +F K  +     
Sbjct: 321 GYVHVSRMEDAFALFSEMPNRDAHSW----NMMVSGYASVGNVELARHYFEKTPEK---- 372

Query: 667 NRVTLAAFMTACYESNK-YALVSDLSARI 694
           + V+  + + A YE NK Y    DL  R+
Sbjct: 373 HTVSWNSII-AAYEKNKDYKEAVDLFIRM 400


>AT5G48730.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:19763152-19765136 FORWARD
           LENGTH=508
          Length = 508

 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 151/331 (45%), Gaps = 1/331 (0%)

Query: 282 KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFR 341
           KPN+  +  +I  L K    ++A E+ +EM+ +G   N   +TAL+    + G  + AF 
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206

Query: 342 LFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGH 401
           L  ++  S N +P+V TY+ +I  + +    ++ + LL  M+ QG+ PNT TY TLID +
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY 266

Query: 402 CKAGNF-ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEAD 460
            KA  F E    L+ ++  +   P+  T N+ +      G+++      +    +G+E +
Sbjct: 267 GKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPN 326

Query: 461 KVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFE 520
             T+NIL+  + K  + K+  A+   M K      I +Y  +I  F R   + + E  F 
Sbjct: 327 IRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFR 386

Query: 521 EAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQS 580
                   P+  T  S++  Y R             + +     D + +  L+    +  
Sbjct: 387 LMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRME 446

Query: 581 KLDEARGLYDSMIEKGLIPCEVTRITLAYEY 611
           K  E +G+ + M +KG  P ++T  T+   Y
Sbjct: 447 KFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477



 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 148/331 (44%), Gaps = 7/331 (2%)

Query: 303 QAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM 362
           Q FE+L E +   +KPNV  +  LI  L K    EKA  LF +++ +E    N   YTA+
Sbjct: 135 QVFELLREQLW--YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMI-NEGCVVNHEVYTAL 191

Query: 363 INGYCRDDKLNRAEMLLGRMK-EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
           ++ Y R  + + A  LL RMK      P+ +TY+ LI    +   F++  DL++ M R+G
Sbjct: 192 VSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQG 251

Query: 422 FSPNICTYNAIVDGLCK-KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
             PN  TYN ++D   K K  V+    +++    +  + D  T N  +        I+  
Sbjct: 252 IRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMM 311

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
              + K   SGI+P+I ++  L+  + +     +     E   ++ +  T  TY  +I  
Sbjct: 312 ENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDA 371

Query: 541 YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC 600
           + R G+L      F  M      P  +   +L+    + SK D+  G+    IE   I  
Sbjct: 372 FGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVL-RFIENSDIRL 430

Query: 601 EVTRIT-LAYEYCKIDDCCSAMVILDRLEKK 630
           ++     L   Y +++       +L+ +EKK
Sbjct: 431 DLVFFNCLVDAYGRMEKFAEMKGVLELMEKK 461



 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/344 (20%), Positives = 157/344 (45%), Gaps = 2/344 (0%)

Query: 213 PDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRY 272
           P+   Y  ++V   K     +A +    M++ G +V++  +T ++S +   G    A   
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207

Query: 273 FHKF-SDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
             +  S    +P++  ++ +I+   +  +  +  ++L +M  QG +PN  T+  LID   
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYG 267

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
           K     +     ++++  ++ KP+  T  + +  +  + ++   E    + +  G+ PN 
Sbjct: 268 KAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNI 327

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
            T+  L+D + K+GN+++   +M  M +  +S  I TYN ++D   + G +++   + + 
Sbjct: 328 RTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRL 387

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
                +    VT   L+  + + +   +   +   +  S I+ D+  +  L+  + R ++
Sbjct: 388 MQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEK 447

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
            +E +   E   + GF P K TY +M+  Y R   +T  +K  H
Sbjct: 448 FAEMKGVLELMEKKGFKPDKITYRTMVKAY-RISGMTTHVKELH 490



 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/295 (19%), Positives = 124/295 (42%), Gaps = 37/295 (12%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGL-VDY 198
           N Q        +++SF ++    +  +++ +M  QG+ PNT T N ++    +  + V+ 
Sbjct: 216 NCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEM 275

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
              L + +      PDS +    + A+   G +                         + 
Sbjct: 276 ESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIE------------------------MM 311

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
           E C           + KF   G++PN+  F  +++   K G+ K+   ++E M    +  
Sbjct: 312 ENC-----------YEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSW 360

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
            + T+  +ID   + G  ++   LF +L++SE   P+ +T  +++  Y R  K ++   +
Sbjct: 361 TIVTYNVVIDAFGRAGDLKQMEYLF-RLMQSERIFPSCVTLCSLVRAYGRASKADKIGGV 419

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
           L  ++   +  +   +  L+D + +   F     ++ LM ++GF P+  TY  +V
Sbjct: 420 LRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMV 474


>AT1G53600.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:20001263-20003416 FORWARD
           LENGTH=717
          Length = 717

 Score =  117 bits (292), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 223/509 (43%), Gaps = 65/509 (12%)

Query: 138 NGNLQKAHEVMQ-----------CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLV 186
           NGNLQ+A  + +            M+ ++AE G++ +A ++  EM  +        +  +
Sbjct: 63  NGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAM 122

Query: 187 MKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGF 246
           +K  C++G    A  LF ++  +    ++ SY  M+  + + G   EA+ +L       F
Sbjct: 123 IKNKCDLG---KAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAE-FLYAETPVKF 174

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
             D+ +  +++S +   G    A+R F     M +K  +++ +SM+ G CK G I  A  
Sbjct: 175 R-DSVASNVLLSGYLRAGKWNEAVRVFQ---GMAVK-EVVSCSSMVHGYCKMGRIVDARS 229

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           + + M     + NV T TA+IDG  K G+ E  F LFL++ +  + K N  T   M    
Sbjct: 230 LFDRMT----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKA- 284

Query: 367 CRD-DKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPN 425
           CRD  +      + G +    L  +     +L+  + K G    A  +  +M  +    +
Sbjct: 285 CRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----D 340

Query: 426 ICTYNAIVDGLCKKGRVQEAYKML-----KD---------GFHN-----------GL--E 458
             ++N+++ GL ++ ++ EAY++      KD         GF             G+  E
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPE 400

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            D +T+  +IS        ++AL  F KM +  + P+ ++++++++       + E    
Sbjct: 401 KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI 460

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
               V+   +       S++  YC+ GN   A K F  +S+    P+ ++Y T+ISG   
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNIVSYNTMISGYSY 516

Query: 579 QSKLDEARGLYDSMIEKGLIPCEVTRITL 607
                +A  L+  +   G  P  VT + L
Sbjct: 517 NGFGKKALKLFSMLESSGKEPNGVTFLAL 545



 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 222/514 (43%), Gaps = 57/514 (11%)

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF 253
           G +  A+ +F +MS R +     S+  M+ AY + G + +A +    M  R     NA  
Sbjct: 64  GNLQEAEAIFRQMSNRSI----VSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
           T +I   C+ G A      +  F D+  K N +++ +MI G  + G   +A E L     
Sbjct: 120 TAMIKNKCDLGKA------YELFCDIPEK-NAVSYATMITGFVRAGRFDEA-EFLYAETP 171

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
             ++ +V ++  L+ G  + G   +A R+F  +   E     V++ ++M++GYC+  ++ 
Sbjct: 172 VKFRDSVASNV-LLSGYLRAGKWNEAVRVFQGMAVKE-----VVSCSSMVHGYCKMGRIV 225

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
            A  L  RM E+ +I    T+T +IDG+ KAG FE  F L   M +EG         A++
Sbjct: 226 DARSLFDRMTERNVI----TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281

Query: 434 DGLCKK-GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
              C+   R +E  ++        LE D    N L+S + K   + +A A+F  M     
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK---- 337

Query: 493 QPDIHSYTTLIAVFCREKRMSESEMFFEE-------------------------AVRFGF 527
             D  S+ +LI    + K++SE+   FE+                            FG 
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGM 397

Query: 528 IPTKR--TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
           +P K   T+T+MI  +   G    A+ +FH+M      P+S  + +++S     + L E 
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457

Query: 586 RGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCS 645
             ++  +++  ++     + +L   YCK  +   A  I   + +   I +  T++    S
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN-IVSYNTMISGY-S 515

Query: 646 ERKVGMAAL-FFHKLLDMDFHVNRVTLAAFMTAC 678
               G  AL  F  L       N VT  A ++AC
Sbjct: 516 YNGFGKKALKLFSMLESSGKEPNGVTFLALLSAC 549



 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 112/250 (44%), Gaps = 15/250 (6%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIAC--EMGLVDYAQYLFEEMSA 208
           M++ F+  G + + VE+       GM+P    +     I+     G  + A   F +M  
Sbjct: 378 MIKGFSGKGEISKCVELF------GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQ 431

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
           + V P+S ++  ++ A   + +++E  +    ++    + D +    ++S +C+ G    
Sbjct: 432 KEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTND 491

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A + F   S+    PN++++ +MI G    G  K+A ++   +   G +PN  T  AL+ 
Sbjct: 492 AYKIFSCISE----PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLS 547

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
                G+ +  ++ F  +  S N +P    Y  M++   R   L+ A  L+  M  +   
Sbjct: 548 ACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCK--- 604

Query: 389 PNTNTYTTLI 398
           P++  + +L+
Sbjct: 605 PHSGVWGSLL 614



 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 37/289 (12%)

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
           N +M +  ++G +  A+ +F  M  +    DS S+  ++    +   + EA +    M  
Sbjct: 314 NSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEKMPG 369

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP--NLINFTSMIEGLCKRGSI 301
           +    D  S+T +I  F  KG  ++ +  F      G+ P  + I +T+MI      G  
Sbjct: 370 K----DMVSWTDMIKGFSGKGEISKCVELF------GMMPEKDNITWTAMISAFVSNGYY 419

Query: 302 KQAF----EMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
           ++A     +ML++ VC    PN YT ++++          +  ++  ++V+  N   ++ 
Sbjct: 420 EEALCWFHKMLQKEVC----PNSYTFSSVLSATASLADLIEGLQIHGRVVKM-NIVNDLS 474

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
              ++++ YC+    N A  +   + E    PN  +Y T+I G+   G  ++A  L +++
Sbjct: 475 VQNSLVSMYCKCGNTNDAYKIFSCISE----PNIVSYNTMISGYSYNGFGKKALKLFSML 530

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
              G  PN  T+ A++      G V   +K  K        + K +YNI
Sbjct: 531 ESSGKEPNGVTFLALLSACVHVGYVDLGWKYFK--------SMKSSYNI 571



 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 46/252 (18%)

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE-AV 523
           N  IS+H +  ++++A A+F +M+   I     S+  +I+ +    +MS++   F+E  V
Sbjct: 54  NSQISKHARNGNLQEAEAIFRQMSNRSIV----SWIAMISAYAENGKMSKAWQVFDEMPV 109

Query: 524 R-------------------------FGFIPTKR--TYTSMICGYCREGNLTMAIKFFHR 556
           R                         F  IP K   +Y +MI G+ R G    A +F + 
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEA-EFLYA 168

Query: 557 MSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD 616
            +      DS+A   L+SG  +  K +EA  ++  M  K ++ C     ++ + YCK+  
Sbjct: 169 ETPVK-FRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCS----SMVHGYCKMGR 223

Query: 617 CCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMA----ALFFHKLLDMDFHVNRVTLA 672
              A  + DR+ +    R   T    +    K G       LF     + D  VN  TLA
Sbjct: 224 IVDARSLFDRMTE----RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLA 279

Query: 673 AFMTACYESNKY 684
               AC +  +Y
Sbjct: 280 VMFKACRDFVRY 291


>AT1G66345.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:24737719-24739353 FORWARD
           LENGTH=544
          Length = 544

 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/446 (20%), Positives = 183/446 (41%), Gaps = 67/446 (15%)

Query: 108 ALSFFHWAIGYSRFRHFMRLY------------IVCATSLIGNGNLQKAHE--------- 146
           ALSFFHW+      RH ++ Y            ++ A +LI +  L    +         
Sbjct: 96  ALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSLLD 155

Query: 147 ----------VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLV 196
                     V   +V+ +A+I  L+   ++   + + G   +  TLN ++  + +  + 
Sbjct: 156 TYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKID 215

Query: 197 DYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGN-------------------------- 230
           D    ++E    + ++P+  + R+M+   CK G                           
Sbjct: 216 DLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSL 275

Query: 231 ---------VLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGL 281
                    + E+   L  +L +  +VD   +++++    ++G    A + F +    G 
Sbjct: 276 VFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGF 335

Query: 282 KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFR 341
             N   +T  +   C++G +K+A  +L EM   G  P   T   LI G  + GW EK   
Sbjct: 336 SANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLE 395

Query: 342 LFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGH 401
            + +++ +    P+   +  M+    + + +NRA  +L +  ++G +P+ +TY+ LI G 
Sbjct: 396 -YCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGF 454

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
            +  + ++A  L   M     SP    + +++ GLC  G+V+   K LK      +E + 
Sbjct: 455 IEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNA 514

Query: 462 VTYNILISEHCKQADIKQALALFSKM 487
             Y+ LI    K  D   A  ++++M
Sbjct: 515 DIYDALIKAFQKIGDKTNADRVYNEM 540



 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 157/346 (45%), Gaps = 2/346 (0%)

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           F L++  + +  +       F +  D G   ++I   ++I    K       + + E  +
Sbjct: 167 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAI 226

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
            +   PN  T   +I  LCK+G  ++   L L  +  +   P+V+  T+++     + ++
Sbjct: 227 DKRIYPNEITIRIMIQVLCKEGRLKEVVDL-LDRICGKRCLPSVIVNTSLVFRVLEEMRI 285

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
             +  LL R+  + ++ +T  Y+ ++    K G+   A  + + M + GFS N   Y   
Sbjct: 286 EESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVF 345

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
           V   C+KG V+EA ++L +   +G+     T+N LI    +    ++ L     M   G+
Sbjct: 346 VRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGL 405

Query: 493 QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIK 552
            P   ++  ++    + + ++ +     +++  GF+P + TY+ +I G+    ++  A+K
Sbjct: 406 MPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALK 465

Query: 553 FFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
            F+ M      P    + +LI GLC   K+ EA   Y  +++K LI
Sbjct: 466 LFYEMEYRKMSPGFEVFRSLIVGLCTCGKV-EAGEKYLKIMKKRLI 510



 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 137/312 (43%), Gaps = 1/312 (0%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           F  +++   K   ++  F++ + +   G+  +V T   LI    K    +  +R++ +  
Sbjct: 167 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIY-ECA 225

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
             +   PN +T   MI   C++ +L     LL R+  +  +P+    T+L+    +    
Sbjct: 226 IDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRI 285

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           E +  L+  +  +    +   Y+ +V    K+G +  A K+  +    G  A+   Y + 
Sbjct: 286 EESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVF 345

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           +   C++ D+K+A  L S+M +SG+ P   ++  LI  F R     +   + E  V  G 
Sbjct: 346 VRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGL 405

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
           +P+   +  M+    +  N+  A +   +  D G VPD   Y  LI G  + + +D+A  
Sbjct: 406 MPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALK 465

Query: 588 LYDSMIEKGLIP 599
           L+  M  + + P
Sbjct: 466 LFYEMEYRKMSP 477



 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 111/245 (45%)

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
           ++ + PN  T   +I   CK G  +   DL++ +  +   P++    ++V  + ++ R++
Sbjct: 227 DKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 286

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
           E+  +LK      +  D + Y+I++    K+ D+  A  +F +M + G   +   YT  +
Sbjct: 287 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 346

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
            V C +  + E+E    E    G  P   T+  +I G+ R G     +++   M   G +
Sbjct: 347 RVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVI 623
           P   A+  ++  + K   ++ A  +    I+KG +P E T   L   + + +D   A+ +
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 466

Query: 624 LDRLE 628
              +E
Sbjct: 467 FYEME 471



 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 98/201 (48%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V    VR   E G +KEA  ++ EM   G+ P  +T N ++      G  +      E M
Sbjct: 341 VYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVM 400

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
             RG+ P  +++  MV +  K+ NV  A++ L+  +D+GF+ D  +++ +I  F E    
Sbjct: 401 VTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDI 460

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
            +AL+ F++     + P    F S+I GLC  G ++   + L+ M  +  +PN   + AL
Sbjct: 461 DQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDAL 520

Query: 327 IDGLCKKGWTEKAFRLFLKLV 347
           I    K G    A R++ +++
Sbjct: 521 IKAFQKIGDKTNADRVYNEMI 541


>AT1G10910.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:3639908-3643974 FORWARD
           LENGTH=664
          Length = 664

 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/425 (21%), Positives = 182/425 (42%), Gaps = 39/425 (9%)

Query: 156 AEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDS 215
           + I  ++ + + +  +     V   Q LN++++     G       LFE M   G    S
Sbjct: 74  SAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG--KIS 131

Query: 216 ASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHK 275
            S     + +    NV +A +    + D    ++      I+S   + G     ++ F +
Sbjct: 132 VSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQ 191

Query: 276 FSDMGLKPNLINFTSMIEGLCK-RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
               GLKP+++ + +++ G  K +    +A E++ E+   G + +   +  ++      G
Sbjct: 192 MKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNG 251

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
            +E+A   F++ ++ E + PN+  Y++++N Y       +A+ L+  MK  GL+PN    
Sbjct: 252 RSEEAEN-FIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMM 310

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
           TTL+  + K G F+R+ +L++ +   G++ N   Y  ++DGL K G+++EA  +  D   
Sbjct: 311 TTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKG 370

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
            G+ +D    +I+IS  C+    K+A  L                              +
Sbjct: 371 KGVRSDGYANSIMISALCRSKRFKEAKEL----------------------------SRD 402

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
           SE  +E+              +M+C YCR G +   ++   +M +    PD   +  LI 
Sbjct: 403 SETTYEKCDLVML-------NTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIK 455

Query: 575 GLCKQ 579
              K+
Sbjct: 456 YFIKE 460



 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/357 (21%), Positives = 150/357 (42%), Gaps = 37/357 (10%)

Query: 155 FAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
           F     + +A+E+   + ++    N    N ++    + G +D    LF++M   G+ PD
Sbjct: 141 FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPD 200

Query: 215 SASYRVMVVAYCKMGN-VLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYF 273
             +Y  ++    K+ N   +A + +  +   G  +D+  +  +++     G +  A  + 
Sbjct: 201 VVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFI 260

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
            +    G  PN+ +++S++     +G  K+A E++ EM   G  PN    T L+    K 
Sbjct: 261 QQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKG 320

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
           G       LF                             +R+  LL  ++  G   N   
Sbjct: 321 G-------LF-----------------------------DRSRELLSELESAGYAENEMP 344

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           Y  L+DG  KAG  E A  + + M  +G   +    + ++  LC+  R +EA ++ +D  
Sbjct: 345 YCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSE 404

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
               + D V  N ++  +C+  +++  + +  KM +  + PD +++  LI  F +EK
Sbjct: 405 TTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEK 461



 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 117/249 (46%), Gaps = 2/249 (0%)

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
           ++ K +V TY++ I  +     +++A  +   + ++    N     +++    K G  + 
Sbjct: 126 QHGKISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDS 184

Query: 410 AFDLMNLMSREGFSPNICTYNAIVDGLCK-KGRVQEAYKMLKDGFHNGLEADKVTYNILI 468
              L + M R+G  P++ TYN ++ G  K K    +A +++ +  HNG++ D V Y  ++
Sbjct: 185 CIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVL 244

Query: 469 SEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFI 528
           +        ++A     +M   G  P+I+ Y++L+  +  +    +++    E    G +
Sbjct: 245 AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLV 304

Query: 529 PTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGL 588
           P K   T+++  Y + G    + +    +   G   + + Y  L+ GL K  KL+EAR +
Sbjct: 305 PNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364

Query: 589 YDSMIEKGL 597
           +D M  KG+
Sbjct: 365 FDDMKGKGV 373



 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/365 (21%), Positives = 151/365 (41%), Gaps = 22/365 (6%)

Query: 109 LSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEI---------- 158
           +  F W   + +    +  Y  C    +G  N+ KA E+ Q +     +I          
Sbjct: 118 IQLFEWMQQHGKIS--VSTYSSC-IKFVGAKNVSKALEIYQSIPDESTKINVYICNSILS 174

Query: 159 -----GRLKEAVEMVFEMHNQGMVPNTQTLNLVMK--IACEMGLVDYAQYLFEEMSARGV 211
                G+L   +++  +M   G+ P+  T N ++   I  + G    A  L  E+   G+
Sbjct: 175 CLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK-AIELIGELPHNGI 233

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
             DS  Y  ++      G   EA+ ++  M   G   +   ++ +++ +  KG   +A  
Sbjct: 234 QMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADE 293

Query: 272 YFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
              +   +GL PN +  T++++   K G   ++ E+L E+   G+  N   +  L+DGL 
Sbjct: 294 LMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLS 353

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
           K G  E+A  +F  + + +  + +    + MI+  CR  +   A+ L    +      + 
Sbjct: 354 KAGKLEEARSIFDDM-KGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDL 412

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
               T++  +C+AG  E    +M  M  +  SP+  T++ ++    K+     AY+   D
Sbjct: 413 VMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLD 472

Query: 452 GFHNG 456
               G
Sbjct: 473 MHSKG 477


>AT5G06400.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:1955959-1959051 FORWARD
           LENGTH=1030
          Length = 1030

 Score =  116 bits (290), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 153/336 (45%), Gaps = 12/336 (3%)

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
           N ++ IA E   +D    L  EM   G   D  ++ +++  Y K   + +       M  
Sbjct: 193 NTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRK 252

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ 303
            GF +D  ++ ++I   C  G    AL ++ +  + G+   L  +  +++ + K   +  
Sbjct: 253 SGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDV 312

Query: 304 AFEMLEEMV--CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT--- 358
              + ++MV  C+  + + + +  L+   C  G  ++A    L+L+R   NK   L    
Sbjct: 313 VQSIADDMVRICEISEHDAFGY--LLKSFCVSGKIKEA----LELIRELKNKEMCLDAKY 366

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           +  ++ G CR +++  A  ++  MK + L  ++N Y  +I G+ +  +  +A +   ++ 
Sbjct: 367 FEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIK 425

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
           + G  P + TY  I+  L K  + ++   +  +   NG+E D V    +++ H  Q  + 
Sbjct: 426 KSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVA 485

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
           +A  +FS M + GI+P   SY+  +   CR  R  E
Sbjct: 486 EAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDE 521



 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 138/310 (44%), Gaps = 4/310 (1%)

Query: 302  KQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTA 361
            KQ   +  EM  QG      T   +I    + G T  A R F K ++     P+  T+  
Sbjct: 695  KQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTF-KEMKDMGLIPSSSTFKC 753

Query: 362  MINGYCRDDKLN--RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
            +I   C     N   A      M   G +P+       +   C+ GN + A   ++ + +
Sbjct: 754  LITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGK 813

Query: 420  EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
             GF P    Y+  +  LC+ G+++EA   L          D+ TY  ++    ++ D+++
Sbjct: 814  IGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQK 872

Query: 480  ALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMIC 539
            AL   + M + G +P +H YT+LI  F +EK++ +     ++       P+  TYT+MIC
Sbjct: 873  ALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMIC 932

Query: 540  GYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            GY   G +  A   F  M + G  PD   Y   I+ LC+  K ++A  L   M++KG+ P
Sbjct: 933  GYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992

Query: 600  CEVTRITLAY 609
              +   T+ Y
Sbjct: 993  STINFRTVFY 1002



 Score =  110 bits (274), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 160/370 (43%), Gaps = 28/370 (7%)

Query: 97  ASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFA 156
           A + GNA     L FF W    + ++H    Y + +  + G G                 
Sbjct: 654 AKIQGNA----VLRFFSWVGKRNGYKHNSEAYNM-SIKVAGCGK---------------- 692

Query: 157 EIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSA 216
                K+   + +EM  QG +    T  +++      GL + A   F+EM   G+ P S+
Sbjct: 693 ---DFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSS 749

Query: 217 SYRVMVVAYC--KMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH 274
           +++ ++   C  K  NV EA +    M+  GF+ D       +   CE G    A     
Sbjct: 750 TFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLD 809

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
               +G  P  + ++  I  LC+ G +++A   L     +    + YT+ +++ GL ++G
Sbjct: 810 SLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRG 868

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
             +KA    +  ++    KP V  YT++I  + ++ +L +      +M+ +   P+  TY
Sbjct: 869 DLQKALDK-VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTY 927

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
           T +I G+   G  E A++    M   G SP+  TY+  ++ LC+  + ++A K+L +   
Sbjct: 928 TAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLD 987

Query: 455 NGLEADKVTY 464
            G+    + +
Sbjct: 988 KGIAPSTINF 997



 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/399 (21%), Positives = 173/399 (43%), Gaps = 32/399 (8%)

Query: 107 VALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVE 166
           +A+ FF+W      F H + +Y                      M+    E   L    E
Sbjct: 171 LAMRFFNWVKQKDGFSHRVGIY--------------------NTMLSIAGEARNLDMVDE 210

Query: 167 MVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYC 226
           +V EM   G   + +T  +++ +  +   +     +FE+M   G   D+ +Y +M+ + C
Sbjct: 211 LVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLC 270

Query: 227 KMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLI 286
             G    A ++   M+++G      ++ +++    +    +  +      +D  ++   I
Sbjct: 271 IAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAK----SEKVDVVQSIADDMVRICEI 326

Query: 287 N----FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           +    F  +++  C  G IK+A E++ E+  +    +      L+ GLC+      A  +
Sbjct: 327 SEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEI 386

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
              + R + +  NV  Y  +I+GY R + +++A      +K+ G  P  +TYT ++    
Sbjct: 387 VDIMKRRKLDDSNV--YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLF 444

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           K   FE+  +L N M   G  P+     A+V G   + RV EA+K+       G++    
Sbjct: 445 KLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWK 504

Query: 463 TYNILISEHCKQADIKQALALFSKM--AKSGIQPDIHSY 499
           +Y+I + E C+ +   + + +F++M  +K  I+ DI S+
Sbjct: 505 SYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSW 543



 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 114/521 (21%), Positives = 209/521 (40%), Gaps = 74/521 (14%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGM-------------VPNTQTLNLVMKIA------- 190
           M+RS    GR   A+E   EM  +G+             +  ++ +++V  IA       
Sbjct: 265 MIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRIC 324

Query: 191 ---------------CEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEAD 235
                          C  G +  A  L  E+  + +  D+  + ++V   C+   +++A 
Sbjct: 325 EISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDAL 384

Query: 236 KWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
           + + +M  R  L D+  + +IIS +  +   ++AL  F      G  P +  +T +++ L
Sbjct: 385 EIVDIMKRRK-LDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHL 443

Query: 296 CKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPN 355
            K    ++   +  EM+  G +P+    TA++ G   +    +A+++F  +   +  KP 
Sbjct: 444 FKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSM-EEKGIKPT 502

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAF---- 411
             +Y+  +   CR  + +    +  +M    ++   + ++ +I    K G  E+      
Sbjct: 503 WKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKE 562

Query: 412 ---------DLMNLMSREGFS-----------PNICTYNAIVDGL--CKKGRVQEAYKML 449
                    D +N   +  FS           P +   +A+   L    K  VQE  ++L
Sbjct: 563 IQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVL 622

Query: 450 KDG-----FHNGLEADKVTYNI-LISEHCKQADIK--QALALFSKMAK-SGIQPDIHSYT 500
                       LE   V +   L+ E  + A I+    L  FS + K +G + +  +Y 
Sbjct: 623 SSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYN 682

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
             I V    K   +    F E  R G + T+ T+  MI  Y R G   +AI+ F  M D 
Sbjct: 683 MSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDM 742

Query: 561 GCVPDSIAYGTLISGLC--KQSKLDEARGLYDSMIEKGLIP 599
           G +P S  +  LI+ LC  K   ++EA   +  MI  G +P
Sbjct: 743 GLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVP 783



 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 140/312 (44%), Gaps = 4/312 (1%)

Query: 241  MLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLC-KRG 299
            M  +G L+   ++ ++I ++   G    A+R F +  DMGL P+   F  +I  LC K+G
Sbjct: 704  MRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKG 763

Query: 300  -SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
             ++++A     EM+  G+ P+       +  LC+ G T+ A      L   +   P  + 
Sbjct: 764  RNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSL--GKIGFPVTVA 821

Query: 359  YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
            Y+  I   CR  KL  A   L   + +  + +  TY +++ G  + G+ ++A D +N M 
Sbjct: 822  YSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMK 881

Query: 419  REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
              G  P +  Y +++    K+ ++++  +  +       E   VTY  +I  +     ++
Sbjct: 882  EIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVE 941

Query: 479  QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
            +A   F  M + G  PD  +Y+  I   C+  +  ++     E +  G  P+   + ++ 
Sbjct: 942  EAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVF 1001

Query: 539  CGYCREGNLTMA 550
             G  REG   +A
Sbjct: 1002 YGLNREGKHDLA 1013



 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 157/375 (41%), Gaps = 37/375 (9%)

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS 277
           Y  M+    +  N+   D+ +S M   G   D  ++T++IS + +     + L  F K  
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251

Query: 278 DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTE 337
             G + +   +  MI  LC  G    A E  +EM+ +G    + T+  L+D + K     
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAK----- 306

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
                        + K +V+   A       DD +   E           I   + +  L
Sbjct: 307 -------------SEKVDVVQSIA-------DDMVRICE-----------ISEHDAFGYL 335

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           +   C +G  + A +L+  +  +    +   +  +V GLC+  R+ +A +++       L
Sbjct: 336 LKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL 395

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
           + D   Y I+IS + +Q D+ +AL  F  + KSG  P + +YT ++    + K+  +   
Sbjct: 396 D-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCN 454

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLC 577
            F E +  G  P     T+++ G+  +  +  A K F  M + G  P   +Y   +  LC
Sbjct: 455 LFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELC 514

Query: 578 KQSKLDEARGLYDSM 592
           + S+ DE   +++ M
Sbjct: 515 RSSRYDEIIKIFNQM 529



 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 126/264 (47%), Gaps = 4/264 (1%)

Query: 149  QCMVRSFAEI-GR-LKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
            +C++    E  GR ++EA     EM   G VP+ + +   +   CE+G    A+   + +
Sbjct: 752  KCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSL 811

Query: 207  SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
               G  P + +Y + + A C++G + EA   L+       L+D  ++  I+    ++G  
Sbjct: 812  GKIG-FPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDL 870

Query: 267  TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             +AL   +   ++G KP +  +TS+I    K   +++  E  ++M  +  +P+V T+TA+
Sbjct: 871  QKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAM 930

Query: 327  IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
            I G    G  E+A+  F  +       P+  TY+  IN  C+  K   A  LL  M ++G
Sbjct: 931  ICGYMSLGKVEEAWNAFRNM-EERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKG 989

Query: 387  LIPNTNTYTTLIDGHCKAGNFERA 410
            + P+T  + T+  G  + G  + A
Sbjct: 990  IAPSTINFRTVFYGLNREGKHDLA 1013



 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/360 (20%), Positives = 141/360 (39%), Gaps = 41/360 (11%)

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A R F  + + +     V  Y  M++       L+  + L+  M++ G   +  T+T LI
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
             + KA    +   +   M + GF  +   YN ++  LC  GR   A +  K+    G+ 
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT 291

Query: 459 ADKVTYNIL-------------------------ISEH----------CKQADIKQALAL 483
               TY +L                         ISEH          C    IK+AL L
Sbjct: 292 FGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALEL 351

Query: 484 FSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCR 543
             ++    +  D   +  L+   CR  RM ++ +   + ++   +     Y  +I GY R
Sbjct: 352 IRELKNKEMCLDAKYFEILVKGLCRANRMVDA-LEIVDIMKRRKLDDSNVYGIIISGYLR 410

Query: 544 EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
           + +++ A++ F  +   G  P    Y  ++  L K  + ++   L++ MIE G+ P  V 
Sbjct: 411 QNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA 470

Query: 604 RITLAYEYCKIDDCCSAMVILDRLEKK----LWIRTATTLVRKLCSERKVGMAALFFHKL 659
              +   +   +    A  +   +E+K     W ++ +  V++LC   +       F+++
Sbjct: 471 ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTW-KSYSIFVKELCRSSRYDEIIKIFNQM 529



 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/306 (17%), Positives = 131/306 (42%), Gaps = 4/306 (1%)

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           ++ G       Y T++    +A N +   +L++ M + G   +I T+  ++    K  ++
Sbjct: 181 QKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI 240

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
            +   + +    +G E D   YNI+I   C       AL  + +M + GI   + +Y  L
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGC 562
           +    + +++   +   ++ VR   I     +  ++  +C  G +  A++    + +   
Sbjct: 301 LDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEM 360

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMV 622
             D+  +  L+ GLC+ +++ +A  + D M  + L    V  I ++  Y + +D   A+ 
Sbjct: 361 CLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIIS-GYLRQNDVSKALE 419

Query: 623 ILDRLEKK---LWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACY 679
             + ++K      + T T +++ L   ++       F+++++     + V + A +    
Sbjct: 420 QFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHL 479

Query: 680 ESNKYA 685
             N+ A
Sbjct: 480 GQNRVA 485


>AT4G01570.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:679487-681904 FORWARD
           LENGTH=805
          Length = 805

 Score =  116 bits (290), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 192/452 (42%), Gaps = 28/452 (6%)

Query: 160 RLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYR 219
           R+ +A+ +  EM   G VP+T   N ++    +   V  A  LFE+M   GV     +Y 
Sbjct: 339 RMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYN 398

Query: 220 VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
           +++    + G           +  +G  VD  +F+++  + C +G    A++   +    
Sbjct: 399 ILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETR 458

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK- 338
           G   +L+  +S++ G  K+G      ++++ +      PNV    A ++   K+  ++  
Sbjct: 459 GFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDK 518

Query: 339 ----------AFRLFLKLVRSENNKPNVLTYTAMINGYCRD----DKL----NRAEMLLG 380
                     +F   + +V SE++  +    + M +         D+L    N+ + L G
Sbjct: 519 DYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFG 578

Query: 381 RMKEQGLIPNTNTY-----TTLIDGHCKAGNFERAFDLMNLMSREGFSP-NICTYNAIVD 434
             + Q +    +++      T +  +   G+   A  L  + +  G +     TYN+++ 
Sbjct: 579 LARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMS 638

Query: 435 GLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP 494
              KKG  Q A  +L   F N   AD  TYN++I    K      A A+  ++ K G   
Sbjct: 639 SFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYL 698

Query: 495 DIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFF 554
           DI  Y TLI    +  R+ E+   F+     G  P   +Y +MI    + G L  A K+ 
Sbjct: 699 DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYL 758

Query: 555 HRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
             M D GC+P+ +   T++  L K+  +++AR
Sbjct: 759 KAMLDAGCLPNHVT-DTILDYLGKE--MEKAR 787



 Score =  112 bits (281), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 124/565 (21%), Positives = 226/565 (40%), Gaps = 121/565 (21%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMV------PNTQTLNLVMKIACEMGLVDYAQYLFEE 205
           +  F   G L  A+ +  EM  +  V      P+  T N ++ + C  G    A  +++E
Sbjct: 255 IHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDE 314

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
           +   G  PD+++YR+++   CK                  + +D+               
Sbjct: 315 LKVSGHEPDNSTYRILIQGCCK-----------------SYRMDD--------------- 342

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
              A+R + +    G  P+ I +  +++G  K   + +A ++ E+MV +G + + +T+  
Sbjct: 343 ---AMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNI 399

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LIDGL + G  E  F LF  L + +    + +T++ +    CR+ KL  A  L+  M+ +
Sbjct: 400 LIDGLFRNGRAEAGFTLFCDL-KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETR 458

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK------- 438
           G   +  T ++L+ G  K G ++    LM  +      PN+  +NA V+   K       
Sbjct: 459 GFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDK 518

Query: 439 --------KGRVQEAYKML---KDGFH----NGLEADKVTYNILISEHCKQADIKQALAL 483
                   KG   +   M+    DG      + +E D  + +  + +   Q +  + L  
Sbjct: 519 DYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFG 578

Query: 484 FSKMAKSGIQP---DIHSYTTLIAVFCREKRMSESEMFFE-------------------- 520
            ++  +   +P   D+    T ++++  +  +S +   FE                    
Sbjct: 579 LARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMS 638

Query: 521 EAVRFGFIPTKR----------------TYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
             V+ G+  T R                TY  +I G  + G   +A     R++  G   
Sbjct: 639 SFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYL 698

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL------------AYEYC 612
           D + Y TLI+ L K ++LDEA  L+D M   G+ P  V+  T+            AY+Y 
Sbjct: 699 DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYL 758

Query: 613 K--IDDCC----SAMVILDRLEKKL 631
           K  +D  C        ILD L K++
Sbjct: 759 KAMLDAGCLPNHVTDTILDYLGKEM 783



 Score =  109 bits (273), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 169/413 (40%), Gaps = 25/413 (6%)

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           G    + +Y  +    C+ G + E    L  M + G  +D     +++      G    A
Sbjct: 87  GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146

Query: 270 LRYFHKFSDMG--LKPNLINFTSMIEGLCKRGSIKQA----FEMLE-----------EMV 312
           L       ++G  L P++  + S++  L K+  ++ A    F++LE            ++
Sbjct: 147 LGVLDYMEELGDCLNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVI 204

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
              + P       L+ GL +     +  R+F KL   +  K +  +Y   I+G+     L
Sbjct: 205 IVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDL 264

Query: 373 NRAEMLLGRMKEQGLI------PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
           + A  L   MKE+  +      P+  TY +LI   C  G  + A  + + +   G  P+ 
Sbjct: 265 DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK 486
            TY  ++ G CK  R+ +A ++  +  +NG   D + YN L+    K   + +A  LF K
Sbjct: 325 STYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK 384

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           M + G++    +Y  LI    R  R       F +  + G      T++ +    CREG 
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444

Query: 547 LTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           L  A+K    M   G   D +   +L+ G  KQ + D    L   + E  L+P
Sbjct: 445 LEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVP 497



 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/419 (22%), Positives = 173/419 (41%), Gaps = 25/419 (5%)

Query: 186 VMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRG 245
           + +  C  GL+     L   M   GV+ D    ++++ +  + G    A   L  M + G
Sbjct: 98  IFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELG 157

Query: 246 FLVDNASFTLIISEFCEKGFATRALRYF---------HKFSDMG------LKPNLINFTS 290
             ++ + +  ++    +K     AL            H   D G        P  +    
Sbjct: 158 DCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNE 217

Query: 291 MIEGLCK---RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL- 346
           ++ GL +   R   K+ FE L+ M  + +K + +++   I G    G  + A  LF ++ 
Sbjct: 218 LLVGLRRADMRSEFKRVFEKLKGM--KRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMK 275

Query: 347 ----VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC 402
               V   +  P++ TY ++I+  C   K   A ++   +K  G  P+ +TY  LI G C
Sbjct: 276 ERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCC 335

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           K+   + A  +   M   GF P+   YN ++DG  K  +V EA ++ +     G+ A   
Sbjct: 336 KSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCW 395

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           TYNILI    +    +    LF  + K G   D  +++ +    CRE ++  +    EE 
Sbjct: 396 TYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
              GF     T +S++ G+ ++G      K    + +   VP+ + +   +    K+ +
Sbjct: 456 ETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQ 514



 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 157/411 (38%), Gaps = 70/411 (17%)

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           K +   Y+ +    CR   L     LLG MKE G+  +      L+D   ++G FE A  
Sbjct: 89  KHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALG 148

Query: 413 LMNLMSREG--------------------------------------------------F 422
           +++ M   G                                                  +
Sbjct: 149 VLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSY 208

Query: 423 SPNICTYNAIVDGLCKKG------RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
            P     N ++ GL +        RV E  K +K       + D  +YNI I       D
Sbjct: 209 LPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKR-----FKFDTWSYNICIHGFGCWGD 263

Query: 477 IKQALALFSKMAK------SGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPT 530
           +  AL+LF +M +      S   PDI +Y +LI V C   +  ++ + ++E    G  P 
Sbjct: 264 LDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPD 323

Query: 531 KRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD 590
             TY  +I G C+   +  A++ +  M  +G VPD+I Y  L+ G  K  K+ EA  L++
Sbjct: 324 NSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFE 383

Query: 591 SMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLV---RKLCSER 647
            M+++G+     T   L     +     +   +   L+KK     A T      +LC E 
Sbjct: 384 KMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREG 443

Query: 648 KVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSARIYKDN 698
           K+  A     ++    F V+ VT+++ +   ++  ++     L   I + N
Sbjct: 444 KLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGN 494



 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/398 (20%), Positives = 154/398 (38%), Gaps = 32/398 (8%)

Query: 242 LDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSI 301
           L  G+     +++ I    C  G             + G+  +      +++ L + G  
Sbjct: 84  LRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKF 143

Query: 302 KQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTA 361
           + A  +L+ M   G   N   + +++  L KK     A  +  KL+ + +N  +  T   
Sbjct: 144 ESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRV 203

Query: 362 MINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA---GNFERAFDLMNLMS 418
           +I  Y                     +P T     L+ G  +A     F+R F+ +  M 
Sbjct: 204 IIVSY---------------------LPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMK 242

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG------FHNGLEADKVTYNILISEHC 472
           R  F  +  +YN  + G    G +  A  + K+       + +    D  TYN LI   C
Sbjct: 243 R--FKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLC 300

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
                K AL ++ ++  SG +PD  +Y  LI   C+  RM ++   + E    GF+P   
Sbjct: 301 LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTI 360

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
            Y  ++ G  +   +T A + F +M   G       Y  LI GL +  + +    L+  +
Sbjct: 361 VYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420

Query: 593 IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
            +KG     +T   +  + C+      A+ +++ +E +
Sbjct: 421 KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETR 458



 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 24/175 (13%)

Query: 133 TSLIGNGNLQKAHEVMQCMVRSF---------------AEIGRLKEAVEMVFEMHNQGMV 177
           +S +  G  Q A  V+  M  +F                ++GR   A  ++  +  QG  
Sbjct: 638 SSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGY 697

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
            +    N ++    +   +D A  LF+ M + G++PD  SY  M+    K G + EA K+
Sbjct: 698 LDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKY 757

Query: 238 LSVMLDRGFLVDNASFTLI--ISEFCEKGFATRALRYFHKFSDMGLKPNLINFTS 290
           L  MLD G L ++ + T++  + +  EK         F K S +  KPN  N +S
Sbjct: 758 LKAMLDAGCLPNHVTDTILDYLGKEMEKA-------RFKKASFVRNKPNNNNISS 805


>AT3G02650.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:568135-569865 FORWARD
           LENGTH=576
          Length = 576

 Score =  115 bits (289), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 2/305 (0%)

Query: 146 EVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEE 205
           E++  ++  F ++G+ K A ++  +    G  PN +T  L ++  C+   +D+A  + E+
Sbjct: 232 EILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEK 291

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEK-G 264
           M   GV  +      ++  +CK G   EA     +   +   +       +I+  C+  G
Sbjct: 292 MLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDG 351

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHT 324
             T A       S    +  +  F+ +I  LC+  ++K A  +L +M+ +G  P      
Sbjct: 352 TITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFN 411

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKE 384
            ++    K G  ++A +  LKL+ S   KP+V TYT +I+GY +   ++ A+ +L   K+
Sbjct: 412 LVVHACSKTGDLDEA-KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKK 470

Query: 385 QGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQE 444
           +    +  TY  LI G+CK   ++ A  L+N M R G  PN   YN ++   C K    E
Sbjct: 471 KHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWE 530

Query: 445 AYKML 449
             ++L
Sbjct: 531 KAEVL 535



 Score =  110 bits (275), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 154/355 (43%), Gaps = 42/355 (11%)

Query: 177 VPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADK 236
           V N + LN ++ +  ++G    A  +F +    G  P++ +Y + + A CK   +  A  
Sbjct: 228 VLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACS 287

Query: 237 WLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH--KFSDMGLKPNLINFTSMIEG 294
               ML  G L +      II+ FC++G A  A   +   K  +  L P  +   ++I  
Sbjct: 288 VCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFV--ATLITA 345

Query: 295 LCKR-GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
           LCK  G+I  A EML ++  +                                 R    K
Sbjct: 346 LCKNDGTITFAQEMLGDLSGEA--------------------------------RRRGIK 373

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           P    ++ +I+  CR   +  A+ LL  M  +G  P    +  ++    K G+ + A ++
Sbjct: 374 P----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEV 429

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
           + LM   G  P++ TY  I+ G  K G + EA ++L +      +   VTY+ LI  +CK
Sbjct: 430 LKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCK 489

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC-REKRMSESEMFFEEAVRFGF 527
             +  +AL L ++M + G+QP+   Y  LI  FC +     ++E+ FEE  + G 
Sbjct: 490 IEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544



 Score =  109 bits (273), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 150/323 (46%), Gaps = 17/323 (5%)

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF 343
           NL     +I    K G  K AF++  +    G+ PN  T+   ++ LCK+ + + A  + 
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289

Query: 344 LKLVRSE-----NNKPNVLTYTAMINGYCRDDKLNRAEML--LGRMKEQGLIPNTNTYTT 396
            K+++S          N++T+      +C++ K   A  +  L + KE+ L P      T
Sbjct: 290 EKMLKSGVLSEGEQMGNIITW------FCKEGKAEEAYSVYELAKTKEKSLPPRF--VAT 341

Query: 397 LIDGHCK-AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN 455
           LI   CK  G    A +++  +S E     I  ++ ++  LC+   V++A  +L D    
Sbjct: 342 LITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISK 401

Query: 456 GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES 515
           G       +N+++    K  D+ +A  +   M   G++PD+++YT +I+ + +   M E+
Sbjct: 402 GPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEA 461

Query: 516 EMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
           +    EA +     +  TY ++I GYC+      A+K  + M   G  P++  Y  LI  
Sbjct: 462 QEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQS 521

Query: 576 LC-KQSKLDEARGLYDSMIEKGL 597
            C K    ++A  L++ M +KGL
Sbjct: 522 FCLKALDWEKAEVLFEEMKQKGL 544



 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 14/273 (5%)

Query: 122 RHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHN--QGMVPN 179
           R FM         ++ +G L +  E M  ++  F + G+ +EA   V+E+    +  +P 
Sbjct: 279 RSFMDWACSVCEKMLKSGVLSEG-EQMGNIITWFCKEGKAEEAYS-VYELAKTKEKSLPP 336

Query: 180 TQTLNLVMKIACEMGLVDYAQYLFEEMSA----RGVHPDSASYRVMVVAYCKMGNVLEAD 235
                L+  +    G + +AQ +  ++S     RG+ P    +  ++ + C+M NV +A 
Sbjct: 337 RFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAK 392

Query: 236 KWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
             L  M+ +G    NA F L++    + G    A          GLKP++  +T +I G 
Sbjct: 393 ALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGY 452

Query: 296 CKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPN 355
            K G + +A E+L E   +  K +  T+ ALI G CK    ++A +L  ++ R    +PN
Sbjct: 453 AKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRF-GVQPN 511

Query: 356 VLTYTAMINGYC-RDDKLNRAEMLLGRMKEQGL 387
              Y  +I  +C +     +AE+L   MK++GL
Sbjct: 512 ADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544



 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 1/253 (0%)

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
           +  + +E G  PN  TY   ++  CK    + A  +   M + G          I+   C
Sbjct: 253 VFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFC 312

Query: 438 KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ-ADIKQALALFSKMAKSGIQPDI 496
           K+G+ +EAY + +                LI+  CK    I  A  +   ++    +  I
Sbjct: 313 KEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGI 372

Query: 497 HSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR 556
             ++ +I   CR + + +++    + +  G  P    +  ++    + G+L  A +    
Sbjct: 373 KPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKL 432

Query: 557 MSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD 616
           M   G  PD   Y  +ISG  K   +DEA+ +     +K      VT   L   YCKI++
Sbjct: 433 MESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEE 492

Query: 617 CCSAMVILDRLEK 629
              A+ +L+ +++
Sbjct: 493 YDEALKLLNEMDR 505



 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 9/212 (4%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G +  A EM+ ++  +      +  + V+   C M  V  A+ L  +M ++G  P +A +
Sbjct: 351 GTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVF 410

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
            ++V A  K G++ EA + L +M  RG   D  ++T+IIS + + G    A     +   
Sbjct: 411 NLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKK 470

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG--WT 336
              K + + + ++I G CK     +A ++L EM   G +PN   +  LI   C K   W 
Sbjct: 471 KHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDW- 529

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCR 368
           EKA  LF      E  K   L   A+  G  R
Sbjct: 530 EKAEVLF------EEMKQKGLHLNAISQGLIR 555



 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 11/167 (6%)

Query: 502 LIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
           LIA+F +  +   +   F +   FGF P  +TY   +   C+   +  A     +M   G
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296

Query: 562 CVPDSIAYGTLISGLCKQSKLDEARGLYD--SMIEKGLIPCEVTRITLAYEYCKIDDCCS 619
            + +    G +I+  CK+ K +EA  +Y+     EK L P  V   TL    CK D   +
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTIT 354

Query: 620 -AMVILDRLE---KKLWIRTATTLVRKLCSERKVGMAALFFHKLLDM 662
            A  +L  L    ++  I+  + ++  LC  R V  A      LLDM
Sbjct: 355 FAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKAL---LLDM 398


>AT5G43820.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:17618948-17620588 FORWARD
           LENGTH=546
          Length = 546

 Score =  115 bits (289), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 178/389 (45%), Gaps = 17/389 (4%)

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G+  ++ +++ ++  L +R       ++L+ MVC+G  P++   T  +D   +  +  +A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP-NTNTYTTLI 398
             LF +   S   K +  ++ A++   C    ++ A+ +    K  G IP ++ +Y  +I
Sbjct: 206 IELFEE-SESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK--GNIPFDSCSYNIMI 262

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
            G  K G  E    ++  M   GF P+  +Y+ +++GL + GR+ ++ ++  +  H G  
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            D   YN +I       D  +++  + +M     +P++ +Y+ L++   + +++S++   
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
           FEE +  G +PT    TS +   C  G    A+  + +    GC     AY  L+  L +
Sbjct: 383 FEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSR 442

Query: 579 QSKLDEARGLYDSMIEKGLIPCEVTRITLAYEY-----CKIDDCCSAMVILDRLEKKLWI 633
             K      ++D M E G  P +V      YEY     C I    +A+++++   +K + 
Sbjct: 443 FGKCGMLLNVWDEMQESGY-PSDVE----VYEYIVDGLCIIGHLENAVLVMEEAMRKGFC 497

Query: 634 RTA---TTLVRKLCSERKVGMAALFFHKL 659
                 + L  KL +  K  +A   F K+
Sbjct: 498 PNRFVYSRLSSKLMASNKTELAYKLFLKI 526



 Score =  108 bits (271), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 1/283 (0%)

Query: 347 VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN 406
           VR      +V +Y+ ++    R    +    +L  M  +G+ P+    T  +D   +   
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
             RA +L       G   +  ++NA++  LC++  V  A K + +     +  D  +YNI
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAA-KSVFNAKKGNIPFDSCSYNI 260

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           +IS   K  ++++   +  +M +SG  PD  SY+ LI    R  R+++S   F+     G
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
            +P    Y +MIC +    +   +++++ RM D  C P+   Y  L+SGL K  K+ +A 
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDAL 380

Query: 587 GLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
            +++ M+ +G++P      +     C      +AMVI  +  K
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRK 423



 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/415 (21%), Positives = 176/415 (42%), Gaps = 19/415 (4%)

Query: 101 GNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMV-------- 152
           GN      ++FF WA+        +  Y V   +L          +V++ MV        
Sbjct: 127 GNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDL 186

Query: 153 -------RSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEE 205
                   SF  +  ++ A+E+  E  + G+  +T++ N +++  CE   V  A+ +F  
Sbjct: 187 ECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN- 245

Query: 206 MSARGVHP-DSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKG 264
            + +G  P DS SY +M+  + K+G V E +K L  M++ GF  D  S++ +I      G
Sbjct: 246 -AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTG 304

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHT 324
               ++  F      G  P+   + +MI          ++      M+ +  +PN+ T++
Sbjct: 305 RINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYS 364

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKE 384
            L+ GL K      A  +F +++ S    P     T+ +   C     + A ++  + ++
Sbjct: 365 KLVSGLIKGRKVSDALEIFEEML-SRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRK 423

Query: 385 QGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQE 444
            G   + + Y  L+    + G      ++ + M   G+  ++  Y  IVDGLC  G ++ 
Sbjct: 424 AGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLEN 483

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
           A  ++++    G   ++  Y+ L S+       + A  LF K+ K+    +  S+
Sbjct: 484 AVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538


>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
           (TPR)-like superfamily protein | chr3:2958704-2961040
           FORWARD LENGTH=778
          Length = 778

 Score =  115 bits (288), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 128/251 (50%), Gaps = 13/251 (5%)

Query: 354 PNVLTYTAMINGYCRDDKL-NRAEML--LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA 410
           P+   YT ++ GY ++ ++ + A ML  + R  ++   P+  TYTT++     AG  +RA
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471

Query: 411 FDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN-GLEADKVTYNILIS 469
             ++  M+R G   N  TYN ++ G CK+ ++  A  +L++   + G+E D V+YNI+I 
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531

Query: 470 EHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE-----AVR 524
                 D   ALA F++M   GI P   SYTTL+  F    +   +   F+E      V+
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
              I     +  ++ GYCR G +  A +   RM ++G  P+   YG+L +G+ +  K  +
Sbjct: 592 VDLI----AWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGD 647

Query: 585 ARGLYDSMIEK 595
           A  L+  + E+
Sbjct: 648 ALLLWKEIKER 658



 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/425 (22%), Positives = 181/425 (42%), Gaps = 44/425 (10%)

Query: 249 DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE-M 307
           D A+F  +++     G   +  + F + S+   +P+++ +  MI+ LC R   K+    +
Sbjct: 235 DTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIK-LCARVGRKELIVFV 293

Query: 308 LEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL---------- 357
           LE ++ +G K  + T  +L+      G    A R+   +     +   VL          
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353

Query: 358 ------------TYTAMINGYCRDDKLNR-------AEMLLGRMKEQG--------LIPN 390
                             +GY   D+++         ++L   +   G          P+
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPD 413

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSRE---GFSPNICTYNAIVDGLCKKGRVQEAYK 447
           +  YTTL+ G+ K G       ++  M R+      P+  TY  +V      G +  A +
Sbjct: 414 SRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQ 473

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAK-SGIQPDIHSYTTLIAVF 506
           +L +    G+ A+++TYN+L+  +CKQ  I +A  L  +M + +GI+PD+ SY  +I   
Sbjct: 474 VLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGC 533

Query: 507 CREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM-SDHGCVPD 565
                 + +  FF E    G  PTK +YT+++  +   G   +A + F  M +D     D
Sbjct: 534 ILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVD 593

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILD 625
            IA+  L+ G C+   +++A+ +   M E G  P   T  +LA    +      A+++  
Sbjct: 594 LIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWK 653

Query: 626 RLEKK 630
            ++++
Sbjct: 654 EIKER 658



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 143/330 (43%), Gaps = 20/330 (6%)

Query: 177 VPNTQTLNLVMKIACEMGLVDYAQYLFEEM---SARGVHPDSASYRVMVVAYCKMGNVLE 233
            P+++    +MK   + G V     + E M     R  HPD  +Y  +V A+   G +  
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470

Query: 234 ADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS-DMGLKPNLINFTSMI 292
           A + L+ M   G   +  ++ +++  +C++    RA     + + D G++P+++++  +I
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530

Query: 293 EGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN 352
           +G         A     EM  +G  P   ++T L+      G  + A R+F +++     
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           K +++ +  ++ GYCR   +  A+ ++ RMKE G  PN  TY +L +G  +A     A  
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL- 649

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
              L+ +E            +   C   + +       D     L+ D+   + L     
Sbjct: 650 ---LLWKE------------IKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICV 694

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           + A  K+AL + + M ++GI P+   Y  +
Sbjct: 695 RAAFFKKALEIIACMEENGIPPNKTKYKKI 724



 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 41/329 (12%)

Query: 241 MLDRGFLVDNASFTLIISEFCEKGF---ATRALRYFHKFSDMGLKPNLINFTSMIEGLCK 297
           +L + F  D+  +T ++  + + G      R L    +  D    P+ + +T+++     
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464

Query: 298 RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
            G + +A ++L EM   G   N  T+  L+ G CK+   ++A  L  ++      +P+V+
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFE---RAFDLM 414
           +Y  +I+G    D    A      M+ +G+ P   +YTTL+     +G  +   R FD M
Sbjct: 525 SYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL---ISEH 471
             M+      ++  +N +V+G C+ G +++A +++     NG   +  TY  L   +S+ 
Sbjct: 585 --MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQA 642

Query: 472 CKQAD-------IKQALALFSKMAKSG---------IQPDIHSYTTLIAVFCREKRMSES 515
            K  D       IK+  A+  K A S          ++PD     TL  +  R       
Sbjct: 643 RKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVR------- 695

Query: 516 EMFFEEAVRF-------GFIPTKRTYTSM 537
             FF++A+         G  P K  Y  +
Sbjct: 696 AAFFKKALEIIACMEENGIPPNKTKYKKI 724



 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 91/440 (20%), Positives = 170/440 (38%), Gaps = 73/440 (16%)

Query: 214 DSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYF 273
           D+ S  ++ +A  K G  L A   +  M+  G+L    ++T  ++     G         
Sbjct: 152 DANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASG--------- 202

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKK 333
               D G + ++  F ++   + + G         + +V Q  +P+     A+++     
Sbjct: 203 ----DDGPEESIKLFIAITRRVKRFGD--------QSLVGQS-RPDTAAFNAVLNACANL 249

Query: 334 GWTEKAFRLFLKLVRSENN-KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
           G T+K ++LF ++  SE + +P+VLTY  MI    R  +      +L R+ ++G+     
Sbjct: 250 GDTDKYWKLFEEM--SEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMT 307

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICT------------------------ 428
           T  +L+  +   G+   A  ++  M RE    ++C                         
Sbjct: 308 TMHSLVAAYVGFGDLRTAERIVQAM-REKRR-DLCKVLRECNAEDLKEKEEEEAEDDEDA 365

Query: 429 --------YNAIVDGLCKKGRVQEAYKMLKDGFHNGLE---------ADKVTYNILISEH 471
                   Y+A  D + ++G V    K+L +      E          D   Y  L+  +
Sbjct: 366 FEDDEDSGYSA-RDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGY 424

Query: 472 CKQ---ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFI 528
            K    AD  + L    +       PD  +YTT+++ F     M  +     E  R G  
Sbjct: 425 MKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVP 484

Query: 529 PTKRTYTSMICGYCREGNLTMAIKFFHRMS-DHGCVPDSIAYGTLISGLCKQSKLDEARG 587
             + TY  ++ GYC++  +  A      M+ D G  PD ++Y  +I G         A  
Sbjct: 485 ANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALA 544

Query: 588 LYDSMIEKGLIPCEVTRITL 607
            ++ M  +G+ P +++  TL
Sbjct: 545 FFNEMRTRGIAPTKISYTTL 564


>AT2G40720.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:16987269-16989851 FORWARD
           LENGTH=860
          Length = 860

 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 186/420 (44%), Gaps = 16/420 (3%)

Query: 141 LQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQ 200
           + K  E+   MV ++AE      A+++   M  + ++P++ TL+ V+     +GL +Y +
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK 393

Query: 201 YLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEF 260
            +  E+  R +   S     ++  Y K G   +A      M ++    D  ++  +IS  
Sbjct: 394 SVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK----DMVAWGSLISGL 449

Query: 261 CEKGFATRALRYFH--KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
           C+ G    AL+ F   K  D  LKP+    TS+        +++   ++   M+  G   
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL 509

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
           NV+  ++LID   K G  E A ++F  +     +  N++ + +MI+ Y R++    +  L
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSM-----STENMVAWNSMISCYSRNNLPELSIDL 564

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
              M  QG+ P++ + T+++       +  +   L     R G   +    NA++D   K
Sbjct: 565 FNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVK 624

Query: 439 KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
            G  + A  + K   H  L    +T+N++I  +    D   AL+LF +M K+G  PD  +
Sbjct: 625 CGFSKYAENIFKKMQHKSL----ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVT 680

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVR-FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
           + +LI+       + E +  FE   + +G  P    Y +M+    R G L  A  F   M
Sbjct: 681 FLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740



 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/423 (21%), Positives = 170/423 (40%), Gaps = 45/423 (10%)

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           G+H D      ++  Y K G V EA+   S ++D+   + NA    +++ + E  +   A
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA----MVAAYAENDYGYSA 357

Query: 270 LRYFHKFSDMGLKPNLINFTSMIE-----GLCKRGSIK---------QAFEMLEEMVCQ- 314
           L  F       + P+    +++I      GL   G            Q+   +E  +   
Sbjct: 358 LDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTL 417

Query: 315 ----GWKPNVY------------THTALIDGLCKKGWTEKAFRLFLKLVRSENN-KPNVL 357
               G  P+ Y               +LI GLCK G  ++A ++F  +   +++ KP+  
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
             T++ N     + L     + G M + GL+ N    ++LID + K G  E A  +   M
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 537

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
           S E    N+  +N+++    +    + +  +       G+  D V+   ++      A +
Sbjct: 538 STE----NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASL 593

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
            +  +L     + GI  D H    LI ++ +      +E  F++      I    T+  M
Sbjct: 594 LKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLI----TWNLM 649

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK-G 596
           I GY   G+   A+  F  M   G  PD + + +LIS       ++E + +++ M +  G
Sbjct: 650 IYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYG 709

Query: 597 LIP 599
           + P
Sbjct: 710 IEP 712



 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 111/551 (20%), Positives = 208/551 (37%), Gaps = 87/551 (15%)

Query: 203 FEEMSARGVHPDSASYRVMVVAYCKMGNVL--EADKWLSVMLDRGFLVDNASFTLIISEF 260
           F  M   GV PD+ S  ++V   CK GN    E  +    ML      D+   T +I  +
Sbjct: 156 FRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMY 215

Query: 261 CEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLE----------- 309
            + G +  A R F +  D   K N++ +  MI G    G  + + ++             
Sbjct: 216 FKFGLSIDAWRVFVEIED---KSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVS 272

Query: 310 ------------------------EMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK 345
                                   ++V  G   + Y  T+L+    K G   +A  +F  
Sbjct: 273 TSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSC 332

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID-----G 400
           +V        +  + AM+  Y  +D    A  L G M+++ ++P++ T + +I      G
Sbjct: 333 VV-----DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLG 387

Query: 401 HCKAGN------FERAFD--------LMNLMSREGFSPN------------ICTYNAIVD 434
               G       F+R           L+ L S+ G  P+            +  + +++ 
Sbjct: 388 LYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLIS 447

Query: 435 GLCKKGRVQEAYKMLKD--GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
           GLCK G+ +EA K+  D     + L+ D      + +       ++  L +   M K+G+
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507

Query: 493 QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR--TYTSMICGYCREGNLTMA 550
             ++   ++LI ++    +    EM  +    F  + T+    + SMI  Y R     ++
Sbjct: 508 VLNVFVGSSLIDLY---SKCGLPEMALK---VFTSMSTENMVAWNSMISCYSRNNLPELS 561

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE 610
           I  F+ M   G  PDS++  +++  +   + L + + L+   +  G+      +  L   
Sbjct: 562 IDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDM 621

Query: 611 YCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVT 670
           Y K      A  I  +++ K  I T   ++    S      A   F ++       + VT
Sbjct: 622 YVKCGFSKYAENIFKKMQHKSLI-TWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVT 680

Query: 671 LAAFMTACYES 681
             + ++AC  S
Sbjct: 681 FLSLISACNHS 691



 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 18/218 (8%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           G+  +T   N ++ +  + G   YA+ +F++M     H    ++ +M+  Y   G+ + A
Sbjct: 607 GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ----HKSLITWNLMIYGYGSHGDCITA 662

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKF-SDMGLKPNLINFTSMIE 293
                 M   G   D+ +F  +IS     GF       F     D G++PN+ ++ +M++
Sbjct: 663 LSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVD 722

Query: 294 GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL----KLVRS 349
            L + G +++A+  ++ M  +         +++   L     T     L +    KL+R 
Sbjct: 723 LLGRAGLLEEAYSFIKAMPIE-------ADSSIWLCLLSASRTHHNVELGILSAEKLLRM 775

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
           E  + +  TY  +IN Y      N A  LLG MKE+GL
Sbjct: 776 EPERGS--TYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811



 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/457 (17%), Positives = 171/457 (37%), Gaps = 50/457 (10%)

Query: 248 VDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP---NLINFTSMIEGLCKRGSIKQA 304
           +  AS    I    +KG   +AL  + K    G  P   ++  F S+++      ++   
Sbjct: 22  ISPASINSGIRALIQKGEYLQALHLYSKHD--GSSPFWTSVFTFPSLLKACSALTNLSYG 79

Query: 305 FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSEN--NKPNVLTYTAM 362
             +   +V  GW+ + +  T+L++   K G+ + A ++F    +S++  +  +V  + +M
Sbjct: 80  KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSM 139

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER-------AFDLMN 415
           I+GY +  +         RM   G+ P+  + + ++   CK GNF R        F L N
Sbjct: 140 IDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN 199

Query: 416 LMSREGF---------------------------SPNICTYNAIVDGLCKKGRVQEAYKM 448
            +  + F                             N+  +N ++ G    G  + +  +
Sbjct: 200 SLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDL 259

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
                +N ++    ++   +    +  +      +   + K G+  D +  T+L++++ +
Sbjct: 260 YMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSK 319

Query: 509 EKRMSESEMFFEEAVRFGFIPTKR--TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS 566
              + E+E  F   V       KR   + +M+  Y        A+  F  M     +PDS
Sbjct: 320 CGMVGEAETVFSCVV------DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDS 373

Query: 567 IAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDR 626
                +IS        +  + ++  + ++ +         L   Y K      A ++   
Sbjct: 374 FTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS 433

Query: 627 LEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMD 663
           +E+K  +    +L+  LC   K   A   F  + D D
Sbjct: 434 MEEKDMVAWG-SLISGLCKNGKFKEALKVFGDMKDDD 469


>AT4G16835.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:9472763-9474803 FORWARD
           LENGTH=656
          Length = 656

 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 188/408 (46%), Gaps = 36/408 (8%)

Query: 179 NTQTLN-LVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
           NT T N L++ I+ +   +  A  LF+E+      PD+ SY +M+  Y +  N  +A   
Sbjct: 91  NTITWNSLLIGISKDPSRMMEAHQLFDEIP----EPDTFSYNIMLSCYVRNVNFEKAQS- 145

Query: 238 LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCK 297
                DR    D AS+  +I+ +  +G   +A   F+      ++ N +++ +MI G  +
Sbjct: 146 ---FFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIE 198

Query: 298 RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
            G +++A    +    +G    V   TA+I G  K    E A  +F  +  ++N    ++
Sbjct: 199 CGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKN----LV 250

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           T+ AMI+GY  + +      L   M E+G+ PN++  ++ + G  +    +    +  ++
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
           S+     ++    +++   CK G + +A+K+    F    + D V +N +IS + +  + 
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKL----FEVMKKKDVVAWNAMISGYAQHGNA 366

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVF--CREKRMSESEM-FFEEAVR-FGFIPTKRT 533
            +AL LF +M  + I+PD   + T +AV   C    +    M +FE  VR +   P    
Sbjct: 367 DKALCLFREMIDNKIRPD---WITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH 423

Query: 534 YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
           YT M+    R G L  A+K    M      P +  +GTL+ G C+  K
Sbjct: 424 YTCMVDLLGRAGKLEEALKLIRSMPFR---PHAAVFGTLL-GACRVHK 467



 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 159/375 (42%), Gaps = 66/375 (17%)

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKP-NLINFTSMIEGLCKRGS-IKQAFEMLEEMVC 313
           II+     G    ALR FH     G++  N I + S++ G+ K  S + +A ++ +E+  
Sbjct: 67  IIARCVRSGDIDGALRVFH-----GMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP- 120

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
              +P+ +++  ++    +    EKA   F ++   +       ++  MI GY R  ++ 
Sbjct: 121 ---EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKD-----AASWNTMITGYARRGEME 172

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
           +A  L   M E+    N  ++  +I G+ + G+ E+A     +    G    +  + A++
Sbjct: 173 KARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMI 224

Query: 434 DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ 493
            G  K  +V+ A  M KD   N    + VT+N +IS + + +  +  L LF  M + GI+
Sbjct: 225 TGYMKAKKVELAEAMFKDMTVN---KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281

Query: 494 P-----------------------------------DIHSYTTLIAVFCREKRMSESEMF 518
           P                                   D+ + T+LI+++C+   + ++   
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
           FE   +   +     + +MI GY + GN   A+  F  M D+   PD I +  ++     
Sbjct: 342 FEVMKKKDVV----AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNH 397

Query: 579 QSKLDEARGLYDSMI 593
              ++     ++SM+
Sbjct: 398 AGLVNIGMAYFESMV 412



 Score = 85.9 bits (211), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 152/327 (46%), Gaps = 25/327 (7%)

Query: 355 NVLTYTAMINGYCRD-DKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           N +T+ +++ G  +D  ++  A  L   + E    P+T +Y  ++  + +  NFE+A   
Sbjct: 91  NTITWNSLLIGISKDPSRMMEAHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSF 146

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
            + M  +    +  ++N ++ G  ++G +++A ++    F++ +E ++V++N +IS + +
Sbjct: 147 FDRMPFK----DAASWNTMITGYARRGEMEKAREL----FYSMMEKNEVSWNAMISGYIE 198

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE-MFFEEAVRFGFIPTKR 532
             D+++A   F      G+     ++T +I  + + K++  +E MF +  V    +    
Sbjct: 199 CGDLEKASHFFKVAPVRGVV----AWTAMITGYMKAKKVELAEAMFKDMTVNKNLV---- 250

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           T+ +MI GY         +K F  M + G  P+S    + + G  + S L   R ++  +
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIH-QI 309

Query: 593 IEKGLIPCEVTRIT-LAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGM 651
           + K  +  +VT +T L   YCK  +   A  + + ++KK  +     ++           
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD-VVAWNAMISGYAQHGNADK 368

Query: 652 AALFFHKLLDMDFHVNRVTLAAFMTAC 678
           A   F +++D     + +T  A + AC
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLAC 395


>AT5G14080.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:4543265-4545256 REVERSE
           LENGTH=634
          Length = 634

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/527 (21%), Positives = 211/527 (40%), Gaps = 71/527 (13%)

Query: 73  VSPPRLHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCA 132
           +SP  +   IDP  L H                 +AL FF+WA     + H    Y    
Sbjct: 45  ISPSLVARVIDPFLLNHHS---------------LALGFFNWAAQQPGYSHDSISYHSIF 89

Query: 133 TSL---------------IGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMV 177
            SL               + +  +     V + ++ +     + + A  ++ E  + G  
Sbjct: 90  KSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQE 149

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
            +    N ++      G  DYAQ LF +M  +GV  ++  + V +  +C+     E ++ 
Sbjct: 150 IHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSS---ETNQL 206

Query: 238 LSVM--LDRGFLVDNASFT--LIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIE 293
           L ++  + +  L  N S    LI+   C+      A     +  ++  KP+ + +  + E
Sbjct: 207 LRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAE 266

Query: 294 GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALI-DGLCKKGWTEK----------AFRL 342
                G++ +   +L++    G  P    + A I D +  K  TE            F +
Sbjct: 267 AFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPM 326

Query: 343 ----------------------FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG 380
                                 FL  + S    P + T + +    CR DK +       
Sbjct: 327 DNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYE 386

Query: 381 RMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
            +  +G      +Y+ +I   CKAG    ++  +  M +EG +P++  YNA+++  CK  
Sbjct: 387 LLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAE 446

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
            ++ A K+  + F  G + +  TYN+LI +  ++ + +++L LF KM + GI+PD   Y 
Sbjct: 447 MIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYM 506

Query: 501 TLIAVFCREKRMSES-EMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           +LI   C+E ++  + E+F +   R     T+R  +  +   C  G+
Sbjct: 507 SLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGH 553



 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 171/404 (42%), Gaps = 15/404 (3%)

Query: 199 AQYLFEEMSARG--VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLI 256
           A ++ EE  + G  +HPD  +   ++      G    A K    M  +G  ++   F + 
Sbjct: 136 AFWVLEEAFSTGQEIHPDVCNR--LLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVY 193

Query: 257 ISEFCEKGFATRALRYFHKFSDMGLKPN-LINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           I  FC      + LR   +     L  N  I    ++  LCK      AF +LEE+    
Sbjct: 194 IGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNID 253

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
            KP+   +  + +     G   +  ++ LK  R     P    Y A I       +L  A
Sbjct: 254 CKPDFMAYRVIAEAFVVTGNLYER-QVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEA 312

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
           + +   +   G  P  N     + G   A + + A + +  M   G  P I T + +   
Sbjct: 313 KEV-AEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKN 371

Query: 436 LC---KKGRVQEAYKMLKD-GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           LC   K   + +AY++L   G+ + L+    +Y+++IS  CK   ++++     +M K G
Sbjct: 372 LCRHDKSDHLIKAYELLSSKGYFSELQ----SYSLMISFLCKAGRVRESYTALQEMKKEG 427

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
           + PD+  Y  LI   C+ + +  ++  ++E    G      TY  +I     EG    ++
Sbjct: 428 LAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESL 487

Query: 552 KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
           + F +M + G  PD   Y +LI GLCK++K++ A  ++   +E+
Sbjct: 488 RLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMER 531



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/458 (20%), Positives = 185/458 (40%), Gaps = 9/458 (1%)

Query: 202 LFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW-LSVMLDRGFLVDNASFTLIISEF 260
           LF+++ +  +  DS+ YR ++     +G   ++  W L      G  +       +++  
Sbjct: 104 LFKQVKSNKILLDSSVYRSLIDTLV-LGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGL 162

Query: 261 CEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNV 320
              G    A + F K    G+  N + F   I   C+     Q   +++E+       N 
Sbjct: 163 TSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNING 222

Query: 321 YTHTALI-DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
                LI   LCK      AF + L+ +R+ + KP+ + Y  +   +     L   +++L
Sbjct: 223 SIIALLILHSLCKCSREMDAFYI-LEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVL 281

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
            + ++ G+ P ++ Y   I     A     A ++  ++    F  +    +A++ G    
Sbjct: 282 KKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI-GSVSA 340

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
                A + L      G      T + L    C+       +  +  ++  G   ++ SY
Sbjct: 341 VDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSY 400

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
           + +I+  C+  R+ ES    +E  + G  P    Y ++I   C+   +  A K +  M  
Sbjct: 401 SLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFV 460

Query: 560 HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCS 619
            GC  +   Y  LI  L ++ + +E+  L+D M+E+G+ P E   ++L    CK     +
Sbjct: 461 EGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEA 520

Query: 620 AMVI----LDRLEKKLWIRTATTLVRKLCSERKVGMAA 653
           AM +    ++R  K +  R  +  V  LCS    G A+
Sbjct: 521 AMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEAS 558



 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 6/292 (2%)

Query: 135 LIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMG 194
           +I +G     ++++  ++ S + +     AVE +  M + G +P  +TL+ + K  C   
Sbjct: 318 VIVSGKFPMDNDILDALIGSVSAVDP-DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHD 376

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT 254
             D+    +E +S++G   +  SY +M+   CK G V E+   L  M   G   D + + 
Sbjct: 377 KSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYN 436

Query: 255 LIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ 314
            +I   C+      A + + +    G K NL  +  +I  L + G  +++  + ++M+ +
Sbjct: 437 ALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLER 496

Query: 315 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR 374
           G +P+   + +LI+GLCK+   E A  +F K +  ++        +  +   C +     
Sbjct: 497 GIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGE 556

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
           A  LL   +E+  + +T  +  L+   C A   E    + ++   +  SP++
Sbjct: 557 ASQLL---REREHLEHTGAHVVLL--KCVADAKEVEIGIRHMQWIKEVSPSL 603



 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 149/386 (38%), Gaps = 22/386 (5%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           + S+I+ L      + AF +LEE    G + +      L+ GL   G  + A +LF+K+ 
Sbjct: 120 YRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKM- 178

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI-DGHCKAGN 406
           R +    N L +   I  +CR  + N+   L+  +K+  L  N +    LI    CK   
Sbjct: 179 RHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSR 238

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
              AF ++  +      P+   Y  I +     G + E   +LK     G+      Y  
Sbjct: 239 EMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRA 298

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
            I +      + +A  +   +       D      LI         S  E F    V  G
Sbjct: 299 FILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVE-FLVYMVSTG 357

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
            +P  RT + +    CR       IK +  +S  G   +  +Y  +IS LCK  ++ E+ 
Sbjct: 358 KLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESY 417

Query: 587 GLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW-----------IRT 635
                M ++GL P       ++     I+ CC A +I  R  KKLW           + T
Sbjct: 418 TALQEMKKEGLAP------DVSLYNALIEACCKAEMI--RPAKKLWDEMFVEGCKMNLTT 469

Query: 636 ATTLVRKLCSERKVGMAALFFHKLLD 661
              L+RKL  E +   +   F K+L+
Sbjct: 470 YNVLIRKLSEEGEAEESLRLFDKMLE 495



 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 83/190 (43%), Gaps = 1/190 (0%)

Query: 122 RHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQ 181
           RH    +++ A  L+ +       +    M+    + GR++E+   + EM  +G+ P+  
Sbjct: 374 RHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVS 433

Query: 182 TLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVM 241
             N +++  C+  ++  A+ L++EM   G   +  +Y V++    + G   E+ +    M
Sbjct: 434 LYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKM 493

Query: 242 LDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTS-MIEGLCKRGS 300
           L+RG   D   +  +I   C++     A+  F K  +   K       S  +  LC  G 
Sbjct: 494 LERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGH 553

Query: 301 IKQAFEMLEE 310
             +A ++L E
Sbjct: 554 SGEASQLLRE 563


>AT2G38420.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:16091093-16092454 FORWARD
           LENGTH=453
          Length = 453

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 160/333 (48%), Gaps = 4/333 (1%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLN-LVMKIACEMGLVDYAQYLFEEMSARGVHPDSAS 217
           GR++EA+E+ F++ N   VP+  TLN L++ +  +   ++    +  +    GV  + ++
Sbjct: 122 GRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEEST 181

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT--RALRYFHK 275
           + +++ A C++G V  A + +  M     +VD   ++ ++S  C+   ++    + Y   
Sbjct: 182 FGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLED 241

Query: 276 FSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGW 335
                  P L ++T ++  L + G  K+   +L +M C   +P++  +T ++ G+     
Sbjct: 242 LRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADED 301

Query: 336 TEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYT 395
             KA +LF +L+      P+V TY   ING C+ + +  A  ++  M + G  PN  TY 
Sbjct: 302 YPKADKLFDELLLL-GLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYN 360

Query: 396 TLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN 455
            LI    KAG+  RA  L   M   G + N  T++ ++    +   V  A+ +L++ F+ 
Sbjct: 361 ILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM 420

Query: 456 GLEADKVTYNILISEHCKQADIKQALALFSKMA 488
            +         +IS  C++  + QA+ L + + 
Sbjct: 421 NVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453



 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 194/457 (42%), Gaps = 32/457 (7%)

Query: 117 GYSRFRHFMRLYIVCATSLIG---NGNLQK--AHEVMQCMVRSFAEIGRLKEAVEMVFEM 171
            + R  +FMR Y     S      N NL++  A E ++  + + +E   +   +   F++
Sbjct: 6   SWHRMSNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDSENASVMRTLLSSFQL 65

Query: 172 HNQGMVPNTQTLNLVMK-IACEMGLVDYAQYLFE-EMSARGVHPDSASYRVMVVAYCKMG 229
           HN    P  Q    V+K +A    L + +  L+  E+S +   P+S  +R ++ AY   G
Sbjct: 66  HN--CEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESI-FRDVIAAYGFSG 122

Query: 230 NVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR----------YFHKFSDM 279
            + EA       ++  F + N  F  + S +         +R             K   M
Sbjct: 123 RIEEA-------IEVFFKIPN--FRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRM 173

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           G++     F  +I+ LC+ G +  A E++  M       +   ++ L+  +CK       
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHK-DSSC 232

Query: 340 FRL--FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
           F +  +L+ +R     P +  YT ++       +      +L +MK   + P+   YT +
Sbjct: 233 FDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIV 292

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           + G     ++ +A  L + +   G +P++ TYN  ++GLCK+  ++ A KM+      G 
Sbjct: 293 LQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGS 352

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
           E + VTYNILI    K  D+ +A  L+ +M  +G+  + H++  +I+ +     +  +  
Sbjct: 353 EPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHG 412

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFF 554
             EEA              +I   C +G +  A++  
Sbjct: 413 LLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELL 449



 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 137/314 (43%), Gaps = 20/314 (6%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWT--------EKA 339
           F  +I      G I++A E+  ++      P+ YT  AL+  L +K  +         KA
Sbjct: 111 FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKA 170

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            R+ ++L  S        T+  +I+  CR  +++ A  L+  M +  +I +   Y+ L+ 
Sbjct: 171 CRMGVRLEES--------TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLS 222

Query: 400 GHCKAGNFERAFDLMNLMS---REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
             CK  +    FD++  +    +  FSP +  Y  ++  L + GR +E   +L     + 
Sbjct: 223 SVCKHKD-SSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDR 281

Query: 457 LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE 516
           +E D V Y I++       D  +A  LF ++   G+ PD+++Y   I   C++  +  + 
Sbjct: 282 VEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGAL 341

Query: 517 MFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
                  + G  P   TY  +I    + G+L+ A   +  M  +G   +S  +  +IS  
Sbjct: 342 KMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401

Query: 577 CKQSKLDEARGLYD 590
            +  ++  A GL +
Sbjct: 402 IEVDEVVCAHGLLE 415



 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 30/212 (14%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMK--IACEMGLVDY--AQYLFEEM 206
           ++R   E GR KE V ++ +M    + P+     +V++  IA E    DY  A  LF+E+
Sbjct: 257 VMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADE----DYPKADKLFDEL 312

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
              G+ PD  +Y V +   CK  ++  A K +S M   G   +  ++ ++I    + G  
Sbjct: 313 LLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDL 372

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMI-------EGLCKRGSIKQAFEMLEEMVCQGWKPN 319
           +RA   + +    G+  N   F  MI       E +C  G +++AF M           N
Sbjct: 373 SRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM-----------N 421

Query: 320 VYTHTA----LIDGLCKKGWTEKAFRLFLKLV 347
           V+  ++    +I  LC+KG  ++A  L   LV
Sbjct: 422 VFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453


>AT2G17670.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:7674420-7675575 FORWARD
           LENGTH=349
          Length = 349

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 130/263 (49%), Gaps = 8/263 (3%)

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENN-KPNVLTYTAMINGYCR--DDKLNRAEMLL 379
           H +++             +LF  +++S+ N +P   T+  +++  CR  D  ++    +L
Sbjct: 88  HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
             M   GL P+  T    +   C+ G  + A DLM  ++ +   P+  TYN ++  LCK 
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207

Query: 440 GRVQEAYKM---LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI 496
             +   Y+    ++D F   ++ D V++ ILI   C   ++++A+ L SK+  +G +PD 
Sbjct: 208 KDLHVVYEFVDEMRDDFD--VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265

Query: 497 HSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR 556
             Y T++  FC   + SE+   +++    G  P + TY ++I G  + G +  A  +   
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325

Query: 557 MSDHGCVPDSIAYGTLISGLCKQ 579
           M D G  PD+  Y +L++G+C++
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRK 348



 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 3/228 (1%)

Query: 389 PNTNTYTTLIDGHCKAGN--FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           P  +T+  L+   C+A +        ++NLM   G  P+  T +  V  LC+ GRV EA 
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS-GIQPDIHSYTTLIAV 505
            ++K+        D  TYN L+   CK  D+        +M     ++PD+ S+T LI  
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
            C  K + E+     +    GF P    Y +++ G+C     + A+  + +M + G  PD
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
            I Y TLI GL K  +++EAR    +M++ G  P   T  +L    C+
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347



 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 130/282 (46%), Gaps = 5/282 (1%)

Query: 199 AQYLFEEMSARGVHP-DSASYRVMVVAYCKMGNVLEADKWLSVML--DRGFLVDNASFTL 255
           A+ LF  ++A    P D   +  ++ +Y  +  V +  K    +L     F    ++F +
Sbjct: 68  AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127

Query: 256 IISEFCEKGFAT--RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
           ++S  C    ++     R  +   + GL+P+ +     +  LC+ G + +A ++++E+  
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
           +   P+ YT+  L+  LCK       +    ++    + KP+++++T +I+  C    L 
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
            A  L+ ++   G  P+   Y T++ G C       A  +   M  EG  P+  TYN ++
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307

Query: 434 DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQA 475
            GL K GRV+EA   LK     G E D  TY  L++  C++ 
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349



 Score =  102 bits (255), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 1/202 (0%)

Query: 134 SLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM 193
           +L+ N  L+         VRS  E GR+ EA +++ E+  +   P+T T N ++K  C+ 
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207

Query: 194 GLVDYAQYLFEEMSAR-GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNAS 252
             +       +EM     V PD  S+ +++   C   N+ EA   +S + + GF  D   
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           +  I+  FC     + A+  + K  + G++P+ I + ++I GL K G +++A   L+ MV
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327

Query: 313 CQGWKPNVYTHTALIDGLCKKG 334
             G++P+  T+T+L++G+C+KG
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKG 349



 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 4/236 (1%)

Query: 277 SDMGLKPNLINFTSMIEGLCK--RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           S    +P    F  ++   C+    SI     +L  MV  G +P+  T    +  LC+ G
Sbjct: 114 SQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETG 173

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ-GLIPNTNT 393
             ++A  L +K +  +++ P+  TY  ++   C+   L+     +  M++   + P+  +
Sbjct: 174 RVDEAKDL-MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF 453
           +T LID  C + N   A  L++ +   GF P+   YN I+ G C   +  EA  + K   
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292

Query: 454 HNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
             G+E D++TYN LI    K   +++A      M  +G +PD  +YT+L+   CR+
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348



 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 3/204 (1%)

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK 403
           L L+ +   +P+ +T    +   C   +++ A+ L+  + E+   P+T TY  L+   CK
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206

Query: 404 AGNFERAFDLMNLMSREGFS--PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
             +    ++ ++ M R+ F   P++ ++  ++D +C    ++EA  ++    + G + D 
Sbjct: 207 CKDLHVVYEFVDEM-RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
             YN ++   C  +   +A+ ++ KM + G++PD  +Y TLI    +  R+ E+ M+ + 
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325

Query: 522 AVRFGFIPTKRTYTSMICGYCREG 545
            V  G+ P   TYTS++ G CR+G
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKG 349



 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/201 (19%), Positives = 88/201 (43%), Gaps = 9/201 (4%)

Query: 473 KQADIKQALALFSKMAKSGIQP-DIHSYTTLIAVFCREKRMSESEMFFEEAVRF--GFIP 529
           K  ++  A +LF+ +A +   P D+  + +++  +     ++++   F+  ++    F P
Sbjct: 61  KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120

Query: 530 TKRTYTSMICGYCR--EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
            + T+  ++   CR  + +++   +  + M ++G  PD +     +  LC+  ++DEA+ 
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180

Query: 588 LYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR----TATTLVRKL 643
           L   + EK   P   T   L    CK  D       +D +     ++    + T L+  +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240

Query: 644 CSERKVGMAALFFHKLLDMDF 664
           C+ + +  A     KL +  F
Sbjct: 241 CNSKNLREAMYLVSKLGNAGF 261


>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:29900617-29903127 FORWARD
           LENGTH=836
          Length = 836

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/460 (20%), Positives = 195/460 (42%), Gaps = 11/460 (2%)

Query: 139 GNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDY 198
           G L+K +     + +    + R K   E+  ++     VPN   +   +KI  E   VD 
Sbjct: 131 GGLKKPYMNASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKE---VDA 187

Query: 199 AQYLFEEMSARGVH-PDSASYRVMVVAYCKMGNVLEADKWLSVMLD----RGFLVDNASF 253
           A  LF     +  + P    Y V+     +  + +        M+      G L  NA +
Sbjct: 188 ALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNA-Y 246

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
             +I    +      A   F K  + G K +   + +++     +G   +AFE+ E M  
Sbjct: 247 NQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEK 306

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
                +  T+  +I  L K G  + AF+LF ++ +    +P+   ++++++   +  +L+
Sbjct: 307 TDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM-KERKLRPSFSVFSSLVDSMGKAGRLD 365

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
            +  +   M+  G  P+   + +LID + KAG  + A  L + M + GF PN   Y  I+
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425

Query: 434 DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ 493
           +   K G+++ A  + KD    G      TY+ L+  H     +  A+ +++ M  +G++
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR 485

Query: 494 PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKF 553
           P + SY +L+ +   ++ +  +     E    G+       + ++  Y ++ ++ +A+K+
Sbjct: 486 PGLSSYISLLTLLANKRLVDVAGKILLEMKAMGY-SVDVCASDVLMIYIKDASVDLALKW 544

Query: 554 FHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
              M   G   ++     L     K    D AR L ++++
Sbjct: 545 LRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLV 584



 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 139/328 (42%), Gaps = 6/328 (1%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK-PNVYTHTALIDGLCKKGWTEKAFR 341
           PN+++ T   + L     +  A  +      Q W  P+   +  L DGL +         
Sbjct: 170 PNMVHIT---QSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQS 226

Query: 342 LFLKLVRSENNKPNVL--TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
           LF ++V+  ++  ++    Y  +I    + +KL  A     + +E G   +T TY  L+ 
Sbjct: 227 LFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMM 286

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
                G   +AF++   M +     +  TY  I+  L K GR+  A+K+ +      L  
Sbjct: 287 LFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRP 346

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
               ++ L+    K   +  ++ ++ +M   G +P    + +LI  + +  ++  +   +
Sbjct: 347 SFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLW 406

Query: 520 EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
           +E  + GF P    YT +I  + + G L +A+  F  M   G +P    Y  L+      
Sbjct: 407 DEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGS 466

Query: 580 SKLDEARGLYDSMIEKGLIPCEVTRITL 607
            ++D A  +Y+SM   GL P   + I+L
Sbjct: 467 GQVDSAMKIYNSMTNAGLRPGLSSYISL 494



 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 3/279 (1%)

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
           N Y  +I    KA   E AF         G   +  TYN ++     KG   +A+++ + 
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
                   D  TY ++I    K   +  A  LF +M +  ++P    +++L+    +  R
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
           +  S   + E   FG  P+   + S+I  Y + G L  A++ +  M   G  P+   Y  
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK-- 629
           +I    K  KL+ A  ++  M + G +P   T   L   +       SAM I + +    
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAG 483

Query: 630 -KLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVN 667
            +  + +  +L+  L ++R V +A     ++  M + V+
Sbjct: 484 LRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 3/183 (1%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ S A+ G+L+ A+ +  +M   G +P   T + ++++    G VD A  ++  M+  G
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAG 483

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDN-ASFTLIISEFCEKGFATRA 269
           + P  +SY  ++        V  A K L  M   G+ VD  AS  L+I  + +      A
Sbjct: 484 LRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI--YIKDASVDLA 541

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           L++       G+K N      + E   K G    A  +LE +V    K ++  +T+++  
Sbjct: 542 LKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAH 601

Query: 330 LCK 332
           L +
Sbjct: 602 LVR 604


>AT5G15010.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:4857241-4858959 FORWARD
           LENGTH=572
          Length = 572

 Score =  113 bits (282), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 155/361 (42%), Gaps = 50/361 (13%)

Query: 247 LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
           LV++ +  ++I ++C      +A+  FH +    L+  + +F S++  LC+  ++  A  
Sbjct: 194 LVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGH 253

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP-NVLTYTAMING 365
           ++                      C K                 +  P +  ++  ++NG
Sbjct: 254 LI---------------------FCNK-----------------DKYPFDAKSFNIVLNG 275

Query: 366 YCRDDKLNR-AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP 424
           +C      R AE +   M   G+  +  +Y+++I  + K G+  +   L + M +E   P
Sbjct: 276 WCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEP 335

Query: 425 NICTYNAIVDGLCKKGRVQEAYKMLKD-GFHNGLEADKVTYNILISEHCKQADIKQALAL 483
           +   YNA+V  L K   V EA  ++K      G+E + VTYN LI   CK    ++A  +
Sbjct: 336 DRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQV 395

Query: 484 FSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFE---EAVRFGFIPTKRTYTSMICG 540
           F +M + G+ P I +Y   + +      +   E  FE   +  + G  PT  TY  +I  
Sbjct: 396 FDEMLEKGLFPTIRTYHAFMRI------LRTGEEVFELLAKMRKMGCEPTVETYIMLIRK 449

Query: 541 YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPC 600
            CR  +    +  +  M +    PD  +Y  +I GL    K++EA G Y  M +KG+ P 
Sbjct: 450 LCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509

Query: 601 E 601
           E
Sbjct: 510 E 510



 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/415 (20%), Positives = 181/415 (43%), Gaps = 30/415 (7%)

Query: 108 ALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEM 167
           A +FF WA     +   +R Y                      M+    ++ +   A  +
Sbjct: 144 AFTFFVWAGKQQGYVRSVREY--------------------HSMISILGKMRKFDTAWTL 183

Query: 168 VFEMHN-QGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYC 226
           + EM      + N+QTL ++++  C +  V  A   F       +      ++ ++ A C
Sbjct: 184 IDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALC 243

Query: 227 KMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEK-GFATRALRYFHKFSDMGLKPNL 285
           +  NV +A   +    D+ +  D  SF ++++ +C   G    A R + +  ++G+K ++
Sbjct: 244 RYKNVSDAGHLIFCNKDK-YPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDV 302

Query: 286 INFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK 345
           ++++SMI    K GS+ +  ++ + M  +  +P+   + A++  L K  +  +A  L   
Sbjct: 303 VSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKT 362

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAG 405
           +   +  +PNV+TY ++I   C+  K   A+ +   M E+GL P   TY   +    + G
Sbjct: 363 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTG 421

Query: 406 NFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYN 465
             E  F+L+  M + G  P + TY  ++  LC+         +  +     +  D  +Y 
Sbjct: 422 --EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYI 479

Query: 466 ILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC----REKRMSESE 516
           ++I        I++A   + +M   G++P+ +    + + F      E+R+++S+
Sbjct: 480 VMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQRITDSK 534



 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 130/316 (41%), Gaps = 48/316 (15%)

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKE-QGLIPNTNTYT 395
           E AF  F+   + +    +V  Y +MI+   +  K + A  L+  M++    + N+ T  
Sbjct: 142 ETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLL 201

Query: 396 TLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML---KDG 452
            +I  +C   +  +A +  +   R      I  + +++  LC+   V +A  ++   KD 
Sbjct: 202 IMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDK 261

Query: 453 FHNGLEADKVTYNILISEHCKQ-ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
           +      D  ++NI+++  C      ++A  ++ +M   G++ D+ SY+           
Sbjct: 262 Y----PFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYS----------- 306

Query: 512 MSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
                                   SMI  Y + G+L   +K F RM      PD   Y  
Sbjct: 307 ------------------------SMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNA 342

Query: 572 LISGLCKQSKLDEARGLYDSM-IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDR-LEK 629
           ++  L K S + EAR L  +M  EKG+ P  VT  +L    CK      A  + D  LEK
Sbjct: 343 VVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEK 402

Query: 630 KLW--IRTATTLVRKL 643
            L+  IRT    +R L
Sbjct: 403 GLFPTIRTYHAFMRIL 418


>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
           (TPR)-like superfamily protein | chr4:18395294-18397393
           FORWARD LENGTH=510
          Length = 510

 Score =  112 bits (281), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 165/366 (45%), Gaps = 20/366 (5%)

Query: 155 FAEIGRLK---EAVEMVFEMHNQ-GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           F E+G+     + +E+   M  Q   +P+    + ++ +  + G    A +LF EM   G
Sbjct: 104 FEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSG 163

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDN-----ASFTLIISEFCEKGF 265
             PD++ Y  ++ A+    +  +A + +   LD+   ++       ++ +++  F + G 
Sbjct: 164 CRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGK 223

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
             +    F       + P++  F  +++   K G IK+   +L  M     KP++ T   
Sbjct: 224 VDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNV 283

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LID   KK   EK  + F  L+RS+  KP + T+ +MI  Y +   +++AE +  +M + 
Sbjct: 284 LIDSYGKKQEFEKMEQTFKSLMRSKE-KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
             IP+  TY  +I  +   G+  RA ++   +          T NA+++  C+ G   EA
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402

Query: 446 YKMLKDGFHNG----LEADKVTYNILISEHCKQADIK-QALALFSKMAKSGIQPDIHSYT 500
            K+    FHN     +  D  TY  L   + K AD+K Q   L  KM K GI P+   + 
Sbjct: 403 DKL----FHNASAFRVHPDASTYKFLYKAYTK-ADMKEQVQILMKKMEKDGIVPNKRFFL 457

Query: 501 TLIAVF 506
             + VF
Sbjct: 458 EALEVF 463



 Score =  102 bits (254), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 147/350 (42%), Gaps = 42/350 (12%)

Query: 291 MIEGLCKRGSIKQAFEMLEEMVCQGWK-PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
           + E L K     Q  E+   M  Q W  P+   ++ LI  + KKG T  A  LF ++ ++
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM-KN 161

Query: 350 ENNKPNVLTYTAMINGYCRD-DKLNRAEMLLGRMKEQGLI----PNTNTYTTLIDGHCKA 404
              +P+   Y A+I  +    DK    E + G + +   I    PN  TY  L+    ++
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G  ++   L   +     SP++ T+N ++D   K G ++E   +L     N  + D +T+
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           N+LI  + K+ + ++    F  + +S  +P + ++ ++I  + + + + ++E  F++   
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMND 341

Query: 525 FGFIPTKRTYTSMI-----CG------------------------------YCREGNLTM 549
             +IP+  TY  MI     CG                              YCR G    
Sbjct: 342 MNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIE 401

Query: 550 AIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           A K FH  S     PD+  Y  L     K    ++ + L   M + G++P
Sbjct: 402 ADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVP 451



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 144/348 (41%), Gaps = 19/348 (5%)

Query: 233 EADKWLS-------VMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNL 285
           ++DKWL        +   R ++ DN  ++ +IS   +KG    A+  F +  + G +P+ 
Sbjct: 109 KSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDA 168

Query: 286 INFTSMIEGLCKRGSIKQAFE----MLEEMV----CQGWKPNVYTHTALIDGLCKKGWTE 337
             + ++I          +A E     L++M     CQ   PNV T+  L+    + G  +
Sbjct: 169 SVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQ---PNVVTYNILLRAFAQSGKVD 225

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
           +   LF  L  S  + P+V T+  +++ Y ++  +   E +L RM+     P+  T+  L
Sbjct: 226 QVNALFKDLDMSPVS-PDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVL 284

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           ID + K   FE+       + R    P + T+N+++    K   + +A  + K       
Sbjct: 285 IDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNY 344

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
               +TY  +I  +     + +A  +F ++ +S       +   ++ V+CR     E++ 
Sbjct: 345 IPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADK 404

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
            F  A  F   P   TY  +   Y +            +M   G VP+
Sbjct: 405 LFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452


>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:9605650-9609625 FORWARD
           LENGTH=1038
          Length = 1038

 Score =  112 bits (280), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 118/508 (23%), Positives = 210/508 (41%), Gaps = 58/508 (11%)

Query: 109 LSFFHWAIGYSRFRHFMRL--------YIVCATSLIGNGNLQKAHEVMQCM------VRS 154
           L  FH A   S F    RL        Y+  +   + +GN+ KA +V++ M      +  
Sbjct: 411 LGLFHDA--QSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSR 468

Query: 155 FAEIGRLK--------EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           FA I  L+        +  E  F   ++  +P+  + N ++ +   + L + A+   +++
Sbjct: 469 FAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQI 528

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
               VH D   Y+  +  YCK G V EA   L V + R   V +  F   ++E       
Sbjct: 529 MVDQVHFDIELYKTAMRVYCKEGMVAEAQD-LIVKMGREARVKDNRFVQTLAE------- 580

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGL-----CKRGSIKQAFEMLEEMVCQGWKPNVY 321
             ++   +K        N+     M  GL      K G++ +   +L  M       +  
Sbjct: 581 --SMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAV 638

Query: 322 THTALIDGLCKKGWTEKA-------FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR 374
               +I    ++G   KA        RL L++           T   +I  Y R  KL  
Sbjct: 639 NR--VISSFVREGDVSKAEMIADIIIRLGLRMEEE--------TIATLIAVYGRQHKLKE 688

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVD 434
           A+ L     E    P  +   ++ID + + G  E A+ L    + +G  P   T + +V+
Sbjct: 689 AKRLYLAAGESK-TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVN 747

Query: 435 GLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP 494
            L  +G+ +EA  + +      +E D V YN LI    +   ++ A  ++ +M  SG+  
Sbjct: 748 ALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPC 807

Query: 495 DIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFF 554
            I +Y T+I+V+ R  ++ ++   F  A R G    ++ YT+MI  Y + G ++ A+  F
Sbjct: 808 SIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLF 867

Query: 555 HRMSDHGCVPDSIAYGTLISGLCKQSKL 582
             M   G  P + +Y  ++  +C  S+L
Sbjct: 868 SEMQKKGIKPGTPSYNMMVK-ICATSRL 894



 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/468 (22%), Positives = 196/468 (41%), Gaps = 19/468 (4%)

Query: 173  NQGMVPNTQTLNLVMKIACEMGLVD--YAQYLFEEMSARGVHP-----------DSASYR 219
             +GMV   Q  +L++K+  E  + D  + Q L E M     H            D  +  
Sbjct: 549  KEGMVAEAQ--DLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALG 606

Query: 220  VMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDM 279
            +M+    K GN+ E    L++M        +++   +IS F  +G  ++A         +
Sbjct: 607  LMLNLRLKEGNLNETKAILNLMFKTDL--GSSAVNRVISSFVREGDVSKAEMIADIIIRL 664

Query: 280  GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
            GL+       ++I    ++  +K+A + L     +   P      ++ID   + GW E A
Sbjct: 665  GLRMEEETIATLIAVYGRQHKLKEA-KRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDA 723

Query: 340  FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
            + LF++    +   P  +T + ++N      K   AE +     E+ +  +T  Y TLI 
Sbjct: 724  YGLFMESA-EKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIK 782

Query: 400  GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
               +AG  + A ++   M   G   +I TYN ++    +  ++ +A ++  +   +GL  
Sbjct: 783  AMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYL 842

Query: 460  DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFF 519
            D+  Y  +I  + K   + +AL+LFS+M K GI+P   SY  ++ +    +   E +   
Sbjct: 843  DEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELL 902

Query: 520  EEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQ 579
            +   R G      TY ++I  Y        A K    + + G       + +L+S L K 
Sbjct: 903  QAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKA 962

Query: 580  SKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
              ++EA   Y  M E G+ P    + T+   Y    D    ++  +++
Sbjct: 963  GMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKM 1010



 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 107/480 (22%), Positives = 203/480 (42%), Gaps = 41/480 (8%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V S+A+ G  +EA++   EM + G VP   T + V+ ++ + G  + A  L+E+M ++G
Sbjct: 299 VVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQG 358

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P + +   M+  Y K  N  +A    + M       D     LII  + + G    A 
Sbjct: 359 IVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQ 418

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F +   + L  +   + +M +     G++ +A +++E M  +    + + +  ++   
Sbjct: 419 SMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCY 478

Query: 331 CK---KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
            K       E+AFR       S+   P+  +   M+N Y R +   +A+  + ++    +
Sbjct: 479 AKIQNVDCAEEAFRAL-----SKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQV 533

Query: 388 IPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP----------------------- 424
             +   Y T +  +CK G    A DL+  M RE                           
Sbjct: 534 HFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEA 593

Query: 425 --NICTYNAIVDGL-----CKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
             N+   + +  GL      K+G + E   +L   F   L +  V  N +IS   ++ D+
Sbjct: 594 VLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDV 651

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
            +A  +   + + G++ +  +  TLIAV+ R+ ++ E++  +  A      P K    SM
Sbjct: 652 SKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGE-SKTPGKSVIRSM 710

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
           I  Y R G L  A   F   ++ GC P ++    L++ L  + K  EA  +  + +EK +
Sbjct: 711 IDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNI 770



 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 104/510 (20%), Positives = 208/510 (40%), Gaps = 65/510 (12%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGN------- 230
           P+     +V+++  ++G +  A+  F EM   G  PD+ +   M+  Y + G        
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245

Query: 231 ---VLE--------------------------ADKWLSVMLDRGFLVDNASFTLIISEFC 261
              V E                           D WL  M++ G   +  ++TL++S + 
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLE-MVEEGVPPNEFTYTLVVSSYA 304

Query: 262 EKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVY 321
           ++GF   AL+ F +   +G  P  + ++S+I    K G  ++A  + E+M  QG  P+ Y
Sbjct: 305 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNY 364

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
           T   ++    K     KA  LF  + R++     V+    +I  Y +    + A+ +   
Sbjct: 365 TCATMLSLYYKTENYPKALSLFADMERNKIPADEVIR-GLIIRIYGKLGLFHDAQSMFEE 423

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
            +   L+ +  TY  +   H  +GN  +A D++ +M       +   Y  ++    K   
Sbjct: 424 TERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQN 483

Query: 442 V---QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHS 498
           V   +EA++ L      GL  D  + N +++ + +    ++A     ++    +  DI  
Sbjct: 484 VDCAEEAFRALS---KTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIEL 539

Query: 499 YTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS 558
           Y T + V+C+E  ++E++    +  R   +   R   +          L  ++   ++  
Sbjct: 540 YKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQT----------LAESMHIVNKHD 589

Query: 559 DHGCV-----PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
            H  V      D +A G +++   K+  L+E + + + M +  L    V R+  +  + +
Sbjct: 590 KHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISS--FVR 647

Query: 614 IDDCCSAMVILD---RLEKKLWIRTATTLV 640
             D   A +I D   RL  ++   T  TL+
Sbjct: 648 EGDVSKAEMIADIIIRLGLRMEEETIATLI 677



 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 142/332 (42%), Gaps = 3/332 (0%)

Query: 268 RALRYFHKFSDMGL--KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
           R +R F  +  + L  +P+++ +T ++    + G IK A E   EM+  G +P+      
Sbjct: 169 RQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGT 228

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           ++    + G    A   F K V+      +   Y  M++   +     +   L   M E+
Sbjct: 229 MLCTYARWG-RHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE 287

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           G+ PN  TYT ++  + K G  E A      M   GF P   TY++++    K G  ++A
Sbjct: 288 GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKA 347

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
             + +D    G+     T   ++S + K  +  +AL+LF+ M ++ I  D      +I +
Sbjct: 348 IGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRI 407

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           + +     +++  FEE  R   +  ++TY +M   +   GN+  A+     M        
Sbjct: 408 YGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLS 467

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
             AY  ++    K   +D A   + ++ + GL
Sbjct: 468 RFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL 499



 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/356 (19%), Positives = 149/356 (41%), Gaps = 4/356 (1%)

Query: 141  LQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQ 200
            L+   E +  ++  +    +LKEA + ++    +   P    +  ++      G ++ A 
Sbjct: 666  LRMEEETIATLIAVYGRQHKLKEA-KRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAY 724

Query: 201  YLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEF 260
             LF E + +G  P + +  ++V A    G   EA+      L++   +D   +  +I   
Sbjct: 725  GLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAM 784

Query: 261  CEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNV 320
             E G    A   + +    G+  ++  + +MI    +   + +A E+       G   + 
Sbjct: 785  LEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDE 844

Query: 321  YTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN-RAEMLL 379
              +T +I    K G   +A  LF ++ + +  KP   +Y  M+   C   +L+   + LL
Sbjct: 845  KIYTNMIMHYGKGGKMSEALSLFSEM-QKKGIKPGTPSYNMMVK-ICATSRLHHEVDELL 902

Query: 380  GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
              M+  G   + +TY TLI  + ++  F  A   + L+  +G   +   +++++  L K 
Sbjct: 903  QAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKA 962

Query: 440  GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
            G ++EA +        G+  D      ++  +    D ++ +  + KM +S ++ D
Sbjct: 963  GMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDD 1018



 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/300 (19%), Positives = 132/300 (44%), Gaps = 3/300 (1%)

Query: 332 KKGWTE-KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
           ++GW + + F  ++KL  S   +P+V+ YT ++  Y +  K+  AE     M E G  P+
Sbjct: 165 QRGWRQVRDFFSWMKLQLS--YRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPD 222

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
                T++  + + G           +       +   YN ++  L KK    +   +  
Sbjct: 223 AVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWL 282

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +    G+  ++ TY +++S + KQ   ++AL  F +M   G  P+  +Y+++I++  +  
Sbjct: 283 EMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAG 342

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
              ++   +E+    G +P+  T  +M+  Y +  N   A+  F  M  +    D +  G
Sbjct: 343 DWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRG 402

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
            +I    K     +A+ +++      L+  E T + ++  +    +   A+ +++ ++ +
Sbjct: 403 LIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTR 462



 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/348 (18%), Positives = 139/348 (39%), Gaps = 7/348 (2%)

Query: 120  RFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPN 179
            + +   RLY+    S            V++ M+ ++   G L++A  +  E   +G  P 
Sbjct: 685  KLKEAKRLYLAAGESKT------PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPG 738

Query: 180  TQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLS 239
              T+++++      G    A+++      + +  D+  Y  ++ A  + G +  A +   
Sbjct: 739  AVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYE 798

Query: 240  VMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRG 299
             M   G      ++  +IS +       +A+  F      GL  +   +T+MI    K G
Sbjct: 799  RMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGG 858

Query: 300  SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
             + +A  +  EM  +G KP   ++  ++  +C            L+ +       ++ TY
Sbjct: 859  KMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTY 917

Query: 360  TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
              +I  Y    +   AE  +  +KE+G+  + + +++L+    KAG  E A      MS 
Sbjct: 918  LTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSE 977

Query: 420  EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
             G SP+      I+ G    G  ++     +    + +E D+   +++
Sbjct: 978  AGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVV 1025



 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/313 (20%), Positives = 136/313 (43%), Gaps = 3/313 (0%)

Query: 213  PDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRY 272
            P  +  R M+ AY + G + +A        ++G      + +++++    +G    A   
Sbjct: 702  PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761

Query: 273  FHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCK 332
                 +  ++ + + + ++I+ + + G ++ A E+ E M   G   ++ T+  +I    +
Sbjct: 762  SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821

Query: 333  KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
                +KA  +F    RS     +   YT MI  Y +  K++ A  L   M+++G+ P T 
Sbjct: 822  GLQLDKAIEIFSNARRS-GLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880

Query: 393  TYTTLIDGHCKAGNFERAFD-LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
            +Y  ++   C         D L+  M R G   ++ TY  ++    +  +  EA K +  
Sbjct: 881  SYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITL 939

Query: 452  GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKR 511
                G+      ++ L+S   K   +++A   + KM+++GI PD     T++  +     
Sbjct: 940  VKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGD 999

Query: 512  MSESEMFFEEAVR 524
              +  +F+E+ +R
Sbjct: 1000 AEKGILFYEKMIR 1012


>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
           (TPR)-like superfamily protein | chr4:18395294-18397578
           FORWARD LENGTH=563
          Length = 563

 Score =  112 bits (280), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 165/366 (45%), Gaps = 20/366 (5%)

Query: 155 FAEIGRLK---EAVEMVFEMHNQGM-VPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           F E+G+     + +E+   M  Q   +P+    + ++ +  + G    A +LF EM   G
Sbjct: 104 FEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSG 163

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDN-----ASFTLIISEFCEKGF 265
             PD++ Y  ++ A+    +  +A + +   LD+   ++       ++ +++  F + G 
Sbjct: 164 CRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGK 223

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
             +    F       + P++  F  +++   K G IK+   +L  M     KP++ T   
Sbjct: 224 VDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNV 283

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LID   KK   EK  + F  L+RS+  KP + T+ +MI  Y +   +++AE +  +M + 
Sbjct: 284 LIDSYGKKQEFEKMEQTFKSLMRSKE-KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
             IP+  TY  +I  +   G+  RA ++   +          T NA+++  C+ G   EA
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402

Query: 446 YKMLKDGFHNG----LEADKVTYNILISEHCKQADIK-QALALFSKMAKSGIQPDIHSYT 500
            K+    FHN     +  D  TY  L   + K AD+K Q   L  KM K GI P+   + 
Sbjct: 403 DKL----FHNASAFRVHPDASTYKFLYKAYTK-ADMKEQVQILMKKMEKDGIVPNKRFFL 457

Query: 501 TLIAVF 506
             + VF
Sbjct: 458 EALEVF 463



 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 147/350 (42%), Gaps = 42/350 (12%)

Query: 291 MIEGLCKRGSIKQAFEMLEEMVCQGWK-PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
           + E L K     Q  E+   M  Q W  P+   ++ LI  + KKG T  A  LF ++ ++
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM-KN 161

Query: 350 ENNKPNVLTYTAMINGYCRD-DKLNRAEMLLGRMKEQGLI----PNTNTYTTLIDGHCKA 404
              +P+   Y A+I  +    DK    E + G + +   I    PN  TY  L+    ++
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G  ++   L   +     SP++ T+N ++D   K G ++E   +L     N  + D +T+
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           N+LI  + K+ + ++    F  + +S  +P + ++ ++I  + + + + ++E  F++   
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMND 341

Query: 525 FGFIPTKRTYTSMI-----CG------------------------------YCREGNLTM 549
             +IP+  TY  MI     CG                              YCR G    
Sbjct: 342 MNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIE 401

Query: 550 AIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           A K FH  S     PD+  Y  L     K    ++ + L   M + G++P
Sbjct: 402 ADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVP 451



 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 144/348 (41%), Gaps = 19/348 (5%)

Query: 233 EADKWLS-------VMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNL 285
           ++DKWL        +   R ++ DN  ++ +IS   +KG    A+  F +  + G +P+ 
Sbjct: 109 KSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDA 168

Query: 286 INFTSMIEGLCKRGSIKQAFEM----LEEMV----CQGWKPNVYTHTALIDGLCKKGWTE 337
             + ++I          +A E     L++M     CQ   PNV T+  L+    + G  +
Sbjct: 169 SVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQ---PNVVTYNILLRAFAQSGKVD 225

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
           +   LF  L  S  + P+V T+  +++ Y ++  +   E +L RM+     P+  T+  L
Sbjct: 226 QVNALFKDLDMSPVS-PDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVL 284

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           ID + K   FE+       + R    P + T+N+++    K   + +A  + K       
Sbjct: 285 IDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNY 344

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
               +TY  +I  +     + +A  +F ++ +S       +   ++ V+CR     E++ 
Sbjct: 345 IPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADK 404

Query: 518 FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
            F  A  F   P   TY  +   Y +            +M   G VP+
Sbjct: 405 LFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452


>AT3G13150.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:4227975-4229630 REVERSE
           LENGTH=551
          Length = 551

 Score =  112 bits (280), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 14/266 (5%)

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDR-GFLVDNAS 252
           G+ ++A  LF+EM          S+  ++ AY     + EA K    + ++ G   D  +
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           +  +I   C KG     L  F +    G +P+LI+F +++E   +R    +   + + M 
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
            +   PN+ ++ + + GL +      A  L + ++++E   P+V TY A+I  Y  D+ L
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNL-IDVMKTEGISPDVHTYNALITAYRVDNNL 314

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM------NLMSREGFSPNI 426
                    MKE+GL P+T TY  LI   CK G+ +RA ++        L+SR    PN+
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSR----PNM 370

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDG 452
             Y  +V+ L   G++ EA +++K+G
Sbjct: 371 --YKPVVERLMGAGKIDEATQLVKNG 394



 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 118/233 (50%), Gaps = 2/233 (0%)

Query: 252 SFTLIISEFCEKGFATRALRYFHKFSD-MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEE 310
           SF  ++S +        A++ F +  + +G+ P+L+ + +MI+ LC++GS+     + EE
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218

Query: 311 MVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDD 370
           +   G++P++ +   L++   ++    +  R++  L++S+N  PN+ +Y + + G  R+ 
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW-DLMKSKNLSPNIRSYNSRVRGLTRNK 277

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
           K   A  L+  MK +G+ P+ +TY  LI  +    N E      N M  +G +P+  TY 
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYC 337

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALAL 483
            ++  LCKKG +  A ++ ++   + L +    Y  ++        I +A  L
Sbjct: 338 MLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390



 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 1/225 (0%)

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD-LMNLMSREGFSPNICTYNAIV 433
           A  L   M E        ++  L+  +  +   + A      L  + G +P++ TYN ++
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200

Query: 434 DGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQ 493
             LC+KG + +   + ++   NG E D +++N L+ E  ++    +   ++  M    + 
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260

Query: 494 PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKF 553
           P+I SY + +    R K+ +++    +     G  P   TY ++I  Y  + NL   +K 
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320

Query: 554 FHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
           ++ M + G  PD++ Y  LI  LCK+  LD A  + +  I+  L+
Sbjct: 321 YNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365



 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 1/221 (0%)

Query: 404 AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN-GLEADKV 462
           +G  E A  L + M        + ++NA++       ++ EA K  K+     G+  D V
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           TYN +I   C++  +   L++F ++ K+G +PD+ S+ TL+  F R +   E +  ++  
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
                 P  R+Y S + G  R    T A+     M   G  PD   Y  LI+     + L
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVI 623
           +E    Y+ M EKGL P  VT   L    CK  D   A+ +
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEV 355



 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 2/256 (0%)

Query: 334 GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ-GLIPNTN 392
           G  E A +LF ++    N +  V ++ A+++ Y    KL+ A      + E+ G+ P+  
Sbjct: 136 GMAEHAHKLFDEMPEL-NCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG 452
           TY T+I   C+ G+ +    +   + + GF P++ ++N +++   ++    E  ++    
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
               L  +  +YN  +    +      AL L   M   GI PD+H+Y  LI  +  +  +
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
            E    + E    G  P   TY  +I   C++G+L  A++       H  +     Y  +
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPV 374

Query: 573 ISGLCKQSKLDEARGL 588
           +  L    K+DEA  L
Sbjct: 375 VERLMGAGKIDEATQL 390



 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 130/278 (46%), Gaps = 5/278 (1%)

Query: 263 KGFAT--RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNV 320
           K F+T    L+Y  KF D+  +  +I    ++ G    G  + A ++ +EM     +  V
Sbjct: 101 KKFSTIDEVLQYQKKFDDIKSEDFVIRIM-LLYGYS--GMAEHAHKLFDEMPELNCERTV 157

Query: 321 YTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG 380
            +  AL+         ++A + F +L       P+++TY  MI   CR   ++    +  
Sbjct: 158 KSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFE 217

Query: 381 RMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
            +++ G  P+  ++ TL++   +   F     + +LM  +  SPNI +YN+ V GL +  
Sbjct: 218 ELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNK 277

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
           +  +A  ++      G+  D  TYN LI+ +    ++++ +  +++M + G+ PD  +Y 
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYC 337

Query: 501 TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
            LI + C++  +  +    EEA++   +     Y  ++
Sbjct: 338 MLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375



 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 104/235 (44%), Gaps = 2/235 (0%)

Query: 181 QTLNLVMKIACEMGLVDYAQYLFEEMSAR-GVHPDSASYRVMVVAYCKMGNVLEADKWLS 239
           ++ N ++        +D A   F+E+  + G+ PD  +Y  M+ A C+ G++ +      
Sbjct: 158 KSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFE 217

Query: 240 VMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRG 299
            +   GF  D  SF  ++ EF  +       R +       L PN+ ++ S + GL +  
Sbjct: 218 ELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNK 277

Query: 300 SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
               A  +++ M  +G  P+V+T+ ALI         E+  + + ++ + +   P+ +TY
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM-KEKGLTPDTVTY 336

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
             +I   C+   L+RA  +     +  L+   N Y  +++    AG  + A  L+
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391



 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/249 (20%), Positives = 111/249 (44%), Gaps = 4/249 (1%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQ-GMVPNTQTLNLVMKIACEMGLVDY 198
           N ++  +    ++ ++    +L EA++   E+  + G+ P+  T N ++K  C  G +D 
Sbjct: 152 NCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDD 211

Query: 199 AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIIS 258
              +FEE+   G  PD  S+  ++  + +    +E D+   +M  +    +  S+   + 
Sbjct: 212 ILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVR 271

Query: 259 EFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
                   T AL         G+ P++  + ++I       ++++  +   EM  +G  P
Sbjct: 272 GLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTP 331

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE-NNKPNVLTYTAMINGYCRDDKLNRAEM 377
           +  T+  LI  LCKKG  ++A  +  + ++ +  ++PN+  Y  ++       K++ A  
Sbjct: 332 DTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAGKIDEATQ 389

Query: 378 LLGRMKEQG 386
           L+   K Q 
Sbjct: 390 LVKNGKLQS 398


>AT4G39952.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr4:18527680-18530007 FORWARD
           LENGTH=775
          Length = 775

 Score =  112 bits (280), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/424 (21%), Positives = 190/424 (44%), Gaps = 16/424 (3%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ S A  G ++E+ +M +EM N+GM P+   ++ ++    +M LV   +     +    
Sbjct: 302 IIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHC 361

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
              DS     ++  YCK   +  A+K    + + G   +  ++  ++  + +     + +
Sbjct: 362 FSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEG---NKEAWNTMLKGYGKMKCHVKCI 418

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F K  ++G++ +  + TS+I      G++     +   +V       +    +LID  
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLY 478

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K G    A+R+F +         NV+T+ AMI  Y   ++  +A  L  RM  +   P+
Sbjct: 479 GKMGDLTVAWRMFCEA------DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPS 532

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
           + T  TL+      G+ ER   +   ++      N+    A++D   K G ++++ ++  
Sbjct: 533 SITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSREL-- 590

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
             F  G + D V +N++IS +    D++ A+ALF +M +S ++P   ++  L++      
Sbjct: 591 --FDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAG 648

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
            + + +  F +  ++   P  + Y+ ++    R GNL  A      M      PD + +G
Sbjct: 649 LVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP---FSPDGVIWG 705

Query: 571 TLIS 574
           TL+S
Sbjct: 706 TLLS 709



 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 103/518 (19%), Positives = 207/518 (39%), Gaps = 73/518 (14%)

Query: 135 LIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMG 194
           ++ +G   +   V    V  +++ G L++A  +  EM ++ +V  T  ++  ++     G
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEG 210

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAY--CKMGNVLEADKWLSVMLDRGFLVDN-- 250
            + Y      +M + G   D  + R +   +  C     L+  + L      GF V N  
Sbjct: 211 GLGY----LCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCL-----HGFAVKNGL 261

Query: 251 ASFTLIISE----FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
           AS   + S     + + G  + A   F +  D     ++ ++TS+I  L + G ++++F+
Sbjct: 262 ASSKFVQSSMFSFYSKSGNPSEAYLSFRELGD----EDMFSWTSIIASLARSGDMEESFD 317

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           M  EM  +G  P+    + LI+ L K     +  + F   V       +     ++++ Y
Sbjct: 318 MFWEMQNKGMHPDGVVISCLINELGKMMLVPQG-KAFHGFVIRHCFSLDSTVCNSLLSMY 376

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPN- 425
           C+ + L+ AE L  R+ E+G   N   + T++ G+ K     +  +L   +   G   + 
Sbjct: 377 CKFELLSVAEKLFCRISEEG---NKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDS 433

Query: 426 ----------------------------------ICTYNAIVDGLCKKGRVQEAYKMLKD 451
                                             I   N+++D   K G +  A++M  +
Sbjct: 434 ASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE 493

Query: 452 GFHNGLEADKVTYNILISE--HCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
                 + + +T+N +I+   HC+Q++  +A+ALF +M     +P   +  TL+      
Sbjct: 494 A-----DTNVITWNAMIASYVHCEQSE--KAIALFDRMVSENFKPSSITLVTLLMACVNT 546

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
             +   +M                  ++I  Y + G+L  + + F    D G   D++ +
Sbjct: 547 GSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF----DAGNQKDAVCW 602

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
             +ISG      ++ A  L+D M E  + P   T + L
Sbjct: 603 NVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLAL 640



 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/362 (20%), Positives = 148/362 (40%), Gaps = 11/362 (3%)

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKL--VRSENNKPNVLTYTAMINGYCRDDKLNRAE 376
           +V   TA+I G  + G +E       K+    S+ +KPN  T             L    
Sbjct: 191 DVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGR 250

Query: 377 MLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGL 436
            L G   + GL  +    +++   + K+GN   A+    L  RE    ++ ++ +I+  L
Sbjct: 251 CLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY----LSFRELGDEDMFSWTSIIASL 306

Query: 437 CKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI 496
            + G ++E++ M  +  + G+  D V  + LI+E  K   + Q  A    + +     D 
Sbjct: 307 ARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDS 366

Query: 497 HSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR 556
               +L++++C+ + +S +E  F    R      K  + +M+ GY +       I+ F +
Sbjct: 367 TVCNSLLSMYCKFELLSVAEKLF---CRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRK 423

Query: 557 MSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD 616
           + + G   DS +  ++IS       +   + L+  +++  L        +L   Y K+ D
Sbjct: 424 IQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGD 483

Query: 617 CCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMT 676
              A  +    +  +    A       C + +  +A   F +++  +F  + +TL   + 
Sbjct: 484 LTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIA--LFDRMVSENFKPSSITLVTLLM 541

Query: 677 AC 678
           AC
Sbjct: 542 AC 543


>AT2G34400.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr2:14516226-14518186 FORWARD
           LENGTH=621
          Length = 621

 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 188/440 (42%), Gaps = 24/440 (5%)

Query: 145 HEVMQCMVRSFAEIGRLKEAVEMVFE-MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLF 203
           H     M+R         EA   ++  M   G+ P+  T N V     ++  +   + + 
Sbjct: 96  HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155

Query: 204 EEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEK 263
             +   G+  D      +++ Y K G V  A K    + +R    D  S+  +IS + E 
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEA 211

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM-VCQGWKPNVYT 322
           G+A  A+  F K  + G +P+     SM+      G ++    +LEEM + +    + + 
Sbjct: 212 GYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFL 270

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
            + LI    K G  + A R+F +++     K + + +TAMI  Y ++ K + A  L   M
Sbjct: 271 GSKLISMYGKCGDLDSARRVFNQMI-----KKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           ++ G+ P+  T +T++      G  E    +    S      NI     +VD   K GRV
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 385

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           +EA ++    F      ++ T+N +I+ +  Q   K+AL LF +M+   + P   ++  +
Sbjct: 386 EEALRV----FEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGV 438

Query: 503 IAVFCREKRMSESEMFFEE-AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
           ++       + +   +F E +  FG +P    YT++I    R G L  A +F  R     
Sbjct: 439 LSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK- 497

Query: 562 CVPDSIAYGTLISGLCKQSK 581
             PD I    ++ G C + K
Sbjct: 498 --PDEIMLAAIL-GACHKRK 514



 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 18/305 (5%)

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
           L +++ Q L+ +      LI    + G+F  +  L ++       PN  ++N ++ GL  
Sbjct: 53  LRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEE----PNHYSFNYMIRGLTN 108

Query: 439 KGRVQEA----YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP 494
                EA    Y+ +K    +GL+ DK TYN +     K  +I    ++ S + K G++ 
Sbjct: 109 TWNDHEAALSLYRRMK---FSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLER 165

Query: 495 DIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFF 554
           D+H   +LI ++ +  ++  +   F+E      +    ++ SMI GY   G    A+  F
Sbjct: 166 DVHINHSLIMMYAKCGQVGYARKLFDEITERDTV----SWNSMISGYSEAGYAKDAMDLF 221

Query: 555 HRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKI 614
            +M + G  PD     +++        L   R L +  I K +         L   Y K 
Sbjct: 222 RKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKC 281

Query: 615 DDCCSAMVILDRLEKKLWIRTATTLVRKLCSER-KVGMAALFFHKLLDMDFHVNRVTLAA 673
            D  SA  + +++ KK   R A T +  + S+  K   A   F ++       +  TL+ 
Sbjct: 282 GDLDSARRVFNQMIKK--DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLST 339

Query: 674 FMTAC 678
            ++AC
Sbjct: 340 VLSAC 344



 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/358 (20%), Positives = 134/358 (37%), Gaps = 108/358 (30%)

Query: 317 KPNVYTHTALIDGLCKKGWT--EKAFRLFLKLVRSENNKPNVLTYT-------------- 360
           +PN Y+   +I GL    W   E A  L+ ++ +    KP+  TY               
Sbjct: 93  EPNHYSFNYMIRGLTNT-WNDHEAALSLYRRM-KFSGLKPDKFTYNFVFIACAKLEEIGV 150

Query: 361 ---------------------AMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
                                ++I  Y +  ++  A  L   + E+    +T ++ ++I 
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER----DTVSWNSMIS 206

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVD-----GLCKKGRVQEAYKMLKD--- 451
           G+ +AG  + A DL   M  EGF P+  T  +++      G  + GR+ E   + K    
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL 266

Query: 452 -----------------------GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
                                   F+  ++ D+V +  +I+ + +     +A  LF +M 
Sbjct: 267 STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME 326

Query: 489 KSGIQPDIHSYTTLIAV--------FCREKRMSESEMFF--------------------E 520
           K+G+ PD  + +T+++           ++     SE+                      E
Sbjct: 327 KTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVE 386

Query: 521 EAVR-FGFIPTKR--TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
           EA+R F  +P K   T+ +MI  Y  +G+   A+  F RMS     P  I +  ++S 
Sbjct: 387 EALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSA 441


>AT1G63320.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:23488884-23489530 REVERSE
           LENGTH=189
          Length = 189

 Score =  111 bits (278), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 11/186 (5%)

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           +  F + S  GL  N + +T++I+GL + G    A E+ +EMV  G  P++ T+  L+DG
Sbjct: 1   MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60

Query: 330 LCKKGWTEKA---------FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG 380
           LCK G  EKA         + LF  L   +  KPNV+TYT MI+G+C+      A  L  
Sbjct: 61  LCKNGKLEKALVAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119

Query: 381 RMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
           +MKE G +P++ TY TLI  H + G+   + +L+  M    F+ +  TY  + D +   G
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDG 178

Query: 441 RVQEAY 446
           R+ + +
Sbjct: 179 RLDKGF 184



 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
           L   M ++GL+ NT TYTTLI G  +AG+ + A ++   M  +G  P+I TYN ++DGLC
Sbjct: 3   LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62

Query: 438 KKGRVQEAY--KMLKDGFH-------NGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           K G++++A     ++DG+         G++ + VTY  +IS  CK+   ++A  LF KM 
Sbjct: 63  KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
           + G  PD  +Y TLI    R+   + S    +E     F     TY
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168



 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 10/183 (5%)

Query: 412 DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEH 471
           +L   MS+ G   N  TY  ++ GL + G    A ++ K+   +G+  D +TYNIL+   
Sbjct: 2   ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61

Query: 472 CKQADIKQALA---------LFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           CK   +++AL          LF  ++  G++P++ +YTT+I+ FC++    E+   F + 
Sbjct: 62  CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
              G +P   TY ++I  + R+G+   + +    M       D+  YG L++ +    +L
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRL 180

Query: 583 DEA 585
           D+ 
Sbjct: 181 DKG 183



 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 16/188 (8%)

Query: 165 VEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVA 224
           +E+  EM  +G+V NT T   +++   + G  D AQ +F+EM + GV PD  +Y +++  
Sbjct: 1   MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60

Query: 225 YCKMGNVLEA-------DKW-----LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRY 272
            CK G + +A       D W     LS+   +G   +  ++T +IS FC+KGF   A   
Sbjct: 61  LCKNGKLEKALVAGKVEDGWDLFCSLSL---KGVKPNVVTYTTMISGFCKKGFKEEAYTL 117

Query: 273 FHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCK 332
           F K  + G  P+   + ++I    + G    + E+++EM    +  +  T+  L+  +  
Sbjct: 118 FRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLH 176

Query: 333 KGWTEKAF 340
            G  +K F
Sbjct: 177 DGRLDKGF 184



 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 9/167 (5%)

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
           + LF +M++ G+  +  +YTTLI    +      ++  F+E V  G  P   TY  ++ G
Sbjct: 1   MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60

Query: 541 YCREGNLTMAI---------KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
            C+ G L  A+           F  +S  G  P+ + Y T+ISG CK+   +EA  L+  
Sbjct: 61  LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120

Query: 592 MIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATT 638
           M E G +P   T  TL   + +  D  ++  ++  +    +   A+T
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 167


>AT1G14470.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:4954080-4955702 FORWARD
           LENGTH=540
          Length = 540

 Score =  110 bits (275), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/445 (21%), Positives = 199/445 (44%), Gaps = 34/445 (7%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +++S    G L +A+     +   G   +    N++M +  +   V+ A+ +F+++S R 
Sbjct: 112 VIKSAGRFGILFQAL-----VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQR- 165

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
                + + VM+  Y K GN  EA K   +M +     D  S+T++I+ F +      A 
Sbjct: 166 ---KGSDWNVMISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENAR 218

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           +YF +  +     +++++ +M+ G  + G  + A  +  +M+  G +PN  T   +I   
Sbjct: 219 KYFDRMPE----KSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA- 273

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN--GYCRDDKLNRAEMLLGRMKEQGLI 388
           C         R  +KL+  +  + N    TA+++    CRD  +  A  +     E G  
Sbjct: 274 CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRD--IQSARRIFN---ELGTQ 328

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
            N  T+  +I G+ + G+   A  L + M +     N+ ++N+++ G    G+   A + 
Sbjct: 329 RNLVTWNAMISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEF 384

Query: 449 LKDGFHNG-LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
            +D    G  + D+VT   ++S     AD++    +   + K+ I+ +   Y +LI ++ 
Sbjct: 385 FEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYA 444

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
           R   + E++  F+E      +    +Y ++   +   G+    +    +M D G  PD +
Sbjct: 445 RGGNLWEAKRVFDEMKERDVV----SYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500

Query: 568 AYGTLISGLCKQSKLDEARGLYDSM 592
            Y ++++   +   L E + ++ S+
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFKSI 525



 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/523 (20%), Positives = 217/523 (41%), Gaps = 66/523 (12%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
           PN   +N + K   +M + +    L+E+ S  G+ PD+ S+ V++ +  + G + +A   
Sbjct: 69  PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQA--- 125

Query: 238 LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCK 297
             ++   GF  D     +I+                    DM +K   +           
Sbjct: 126 --LVEKLGFFKDPYVRNVIM--------------------DMYVKHESVE---------- 153

Query: 298 RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
             S ++ F+ + +     W         +I G  K G  E+A +LF  +   EN+   V+
Sbjct: 154 --SARKVFDQISQRKGSDW-------NVMISGYWKWGNKEEACKLFDMM--PEND---VV 199

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           ++T MI G+ +   L  A     RM E+ ++    ++  ++ G+ + G  E A  L N M
Sbjct: 200 SWTVMITGFAKVKDLENARKYFDRMPEKSVV----SWNAMLSGYAQNGFTEDALRLFNDM 255

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
            R G  PN  T+  ++     +        ++K      +  +      L+  H K  DI
Sbjct: 256 LRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDI 315

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
           + A  +F+++   G Q ++ ++  +I+ + R   MS +   F+   +   +    ++ S+
Sbjct: 316 QSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVV----SWNSL 368

Query: 538 ICGYCREGNLTMAIKFFHRMSDHG-CVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           I GY   G   +AI+FF  M D+G   PD +   +++S     + L+    + D + +  
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQ 428

Query: 597 LIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFF 656
           +   +    +L + Y +  +   A  + D ++++  + +  TL     +           
Sbjct: 429 IKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERD-VVSYNTLFTAFAANGDGVETLNLL 487

Query: 657 HKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSARIYKDNR 699
            K+ D     +RVT  + +TAC   N+  L+ +   RI+K  R
Sbjct: 488 SKMKDEGIEPDRVTYTSVLTAC---NRAGLLKE-GQRIFKSIR 526


>AT5G47360.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:19214445-19215878 REVERSE
           LENGTH=477
          Length = 477

 Score =  110 bits (274), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 148/356 (41%), Gaps = 44/356 (12%)

Query: 250 NASFTLIISEFCEKG-FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           N     I+   C +   A  AL    KF +  +  + + +  +I     +G +  A  ++
Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188

Query: 309 EEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCR 368
           +EM C G    +Y                                P+V+TYT+MINGYC 
Sbjct: 189 KEMDCVG----LY--------------------------------PDVITYTSMINGYCN 212

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG----FSP 424
             K++ A  L   M +   + N+ TY+ +++G CK+G+ ERA +L+  M +E      SP
Sbjct: 213 AGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISP 272

Query: 425 NICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ-ADIKQALAL 483
           N  TY  ++   C+K RV+EA  +L    + G   ++VT  +LI    +   D+K    L
Sbjct: 273 NAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKL 332

Query: 484 FSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCR 543
             K+ K G       +++      R KR  E+E  F   +  G  P     + +    C 
Sbjct: 333 IDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCL 392

Query: 544 EGNLTMAIKFFHRMS--DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
                     +  +   D     DS  +  L+ GLC+Q    EA  L  SM++K +
Sbjct: 393 LERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKM 448



 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 141/316 (44%), Gaps = 12/316 (3%)

Query: 197 DYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW-LSVMLDRGFLVDNASFTL 255
           D  +Y+ E         +  + R+ V+  C   N+ +   W L    +     D  ++ L
Sbjct: 112 DLIKYVIESYRKEECFVNVKTMRI-VLTLCNQANLADEALWVLRKFPEFNVCADTVAYNL 170

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
           +I  F +KG    A     +   +GL P++I +TSMI G C  G I  A+ + +EM    
Sbjct: 171 VIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHD 230

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN---KPNVLTYTAMINGYCRDDKL 372
              N  T++ +++G+CK G  E+A  L  ++ + +      PN +TYT +I  +C   ++
Sbjct: 231 CVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRV 290

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM--NLMSREGFSPNICTYN 430
             A ++L RM  +G +PN  T   LI G  +     +A   +   L+   G S + C  +
Sbjct: 291 EEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSS 350

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM--- 487
           A V  L +  R +EA K+ +     G+  D +  + +  E C          L+ ++   
Sbjct: 351 ATV-SLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKK 409

Query: 488 -AKSGIQPDIHSYTTL 502
             KS I  DIH+   L
Sbjct: 410 DVKSTIDSDIHAVLLL 425



 Score = 89.4 bits (220), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/329 (21%), Positives = 145/329 (44%), Gaps = 10/329 (3%)

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
           + A  +L +  E  +  +T  Y  +I      G+   A  L+  M   G  P++ TY ++
Sbjct: 147 DEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSM 206

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG- 491
           ++G C  G++ +A+++ K+   +    + VTY+ ++   CK  D+++AL L ++M K   
Sbjct: 207 INGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDG 266

Query: 492 ---IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
              I P+  +YT +I  FC ++R+ E+ +  +     G +P + T   +I G        
Sbjct: 267 GGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDV 326

Query: 549 MAI-KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
            A+ K   ++   G V  S  + +    L +  + +EA  ++  M+ +G+ P  +    +
Sbjct: 327 KALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHV 386

Query: 608 AYEYCKIDDCCSAMVILDRLEKKLWIRTATT-----LVRKLCSERKVGMAALFFHKLLDM 662
             E C ++      ++   +EKK    T  +     L+  LC +     AA     +LD 
Sbjct: 387 FRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDK 446

Query: 663 DFHVNRVTLAAFMTACYESNKYALVSDLS 691
              +    +   + A  ++    L+S  S
Sbjct: 447 KMRLKVSHVEKIIEALKKTGDEDLMSRFS 475



 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 175/391 (44%), Gaps = 34/391 (8%)

Query: 108 ALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEM 167
            L FF WA   S  RH   +Y              KA ++++  +R+  ++      ++ 
Sbjct: 78  GLRFFIWAGTLSSHRHSAYMY-------------TKACDILK--IRAKPDL------IKY 116

Query: 168 VFEMH-NQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYC 226
           V E +  +    N +T+ +V+ +  +  L D A ++  +     V  D+ +Y +++  + 
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFA 176

Query: 227 KMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLI 286
             G++  AD  +  M   G   D  ++T +I+ +C  G    A R   + S      N +
Sbjct: 177 DKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSV 236

Query: 287 NFTSMIEGLCKRGSIKQAFEMLEEMVCQGW----KPNVYTHTALIDGLCKKGWTEKAFRL 342
            ++ ++EG+CK G +++A E+L EM  +       PN  T+T +I   C+K   E+A  L
Sbjct: 237 TYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEAL-L 295

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA-EMLLGRMKEQGLIPNTNTYTTLIDGH 401
            L  + +    PN +T   +I G   +D+  +A   L+ ++ + G +  +  +++     
Sbjct: 296 VLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSL 355

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA-- 459
            +   +E A  +  LM   G  P+    + +   LC   R  + + + ++     +++  
Sbjct: 356 IRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTI 415

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKS 490
           D   + +L+   C+Q +  +A    +K+AKS
Sbjct: 416 DSDIHAVLLLGLCQQGNSWEA----AKLAKS 442



 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 5/161 (3%)

Query: 472 CKQADI-KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPT 530
           C QA++  +AL +  K  +  +  D  +Y  +I +F  +  ++ ++M  +E    G  P 
Sbjct: 140 CNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPD 199

Query: 531 KRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYD 590
             TYTSMI GYC  G +  A +    MS H CV +S+ Y  ++ G+CK   ++ A  L  
Sbjct: 200 VITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLA 259

Query: 591 SMIEK---GLI-PCEVTRITLAYEYCKIDDCCSAMVILDRL 627
            M ++   GLI P  VT   +   +C+      A+++LDR+
Sbjct: 260 EMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRM 300



 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 6/204 (2%)

Query: 432 IVDGLCKKGRV-QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
           IV  LC +  +  EA  +L+      + AD V YN++I     + D+  A  L  +M   
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           G+ PD+ +YT++I  +C   ++ ++    +E  +   +    TY+ ++ G C+ G++  A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254

Query: 551 IKFFHRM--SDHGCV--PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRIT 606
           ++    M   D G +  P+++ Y  +I   C++ +++EA  + D M  +G +P  VT   
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314

Query: 607 LAYEYCKIDDCCSAMV-ILDRLEK 629
           L     + D+   A+  ++D+L K
Sbjct: 315 LIQGVLENDEDVKALSKLIDKLVK 338



 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 8/190 (4%)

Query: 502 LIAVFCREKRMSESEMF-FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
           ++   C +  +++  ++   +   F        Y  +I  +  +G+L +A      M   
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSA 620
           G  PD I Y ++I+G C   K+D+A  L   M +   +   VT   +    CK  D   A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254

Query: 621 MVILDRLEKKLW-------IRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAA 673
           + +L  +EK+           T T +++  C +R+V  A L   ++ +     NRVT   
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314

Query: 674 FMTACYESNK 683
            +    E+++
Sbjct: 315 LIQGVLENDE 324


>AT3G61170.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:22638691-22641237 REVERSE
           LENGTH=783
          Length = 783

 Score =  110 bits (274), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 195/447 (43%), Gaps = 21/447 (4%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
             ++  + + G   EA  + +EM + G+ PN  TL  V+++   + L+   + +      
Sbjct: 94  NALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK 153

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G   D      ++  Y +   + EA+     M       +N ++T +++ + + GFA +
Sbjct: 154 TGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK---NNVTWTSMLTGYSQNGFAFK 210

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A+  F      G + N   F S++       + +   ++   +V  G+K N+Y  +ALID
Sbjct: 211 AIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALID 270

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
              K    E A R  L+ +  +    +V+++ +MI G  R   +  A  + GRM E+ + 
Sbjct: 271 MYAKCREMESA-RALLEGMEVD----DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325

Query: 389 PNTNTYTTLIDGHCKA---GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
            +  T  ++++  C A      + A     L+ + G++      NA+VD   K+G +  A
Sbjct: 326 IDDFTIPSILN--CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSA 383

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            K+    F   +E D +++  L++ +       +AL LF  M   GI PD     ++++ 
Sbjct: 384 LKV----FEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSA 439

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
                 +   +      ++ GF  +     S++  Y + G+L  A   F+ M     + D
Sbjct: 440 SAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME----IRD 495

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSM 592
            I +  LI G  K   L++A+  +DSM
Sbjct: 496 LITWTCLIVGYAKNGLLEDAQRYFDSM 522



 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 107/484 (22%), Positives = 195/484 (40%), Gaps = 62/484 (12%)

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
           NL++    + G VD A+ +F++M  R    D  ++  M+VAY     + +A+K     L 
Sbjct: 32  NLLLGDLSKSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNSRRLSDAEK-----LF 82

Query: 244 RGFLVDNA-SFTLIISEFCEKGFATRALRYFHKFSDMGLKP------------------- 283
           R   V N  S+  +IS +C+ G    A   F +    G+KP                   
Sbjct: 83  RSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLL 142

Query: 284 ------------------NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTA 325
                             N++N    +   CKR  I +A  + E M  +G K NV T T+
Sbjct: 143 RGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR--ISEAEYLFETM--EGEKNNV-TWTS 197

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           ++ G  + G+  KA   F  L R E N+ N  T+ +++              +   + + 
Sbjct: 198 MLTGYSQNGFAFKAIECFRDL-RREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           G   N    + LID + K    E A  L+  M  +    ++ ++N+++ G  ++G + EA
Sbjct: 257 GFKTNIYVQSALIDMYAKCREMESARALLEGMEVD----DVVSWNSMIVGCVRQGLIGEA 312

Query: 446 YKMLKDGFHNGLEADKVTY-NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
             M        ++ D  T  +IL      + ++K A +    + K+G          L+ 
Sbjct: 313 LSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVD 372

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
           ++ +   M  +   FE  +    I    ++T+++ G    G+   A+K F  M   G  P
Sbjct: 373 MYAKRGIMDSALKVFEGMIEKDVI----SWTALVTGNTHNGSYDEALKLFCNMRVGGITP 428

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVIL 624
           D I   +++S   + + L+  + ++ + I+ G         +L   Y K      A VI 
Sbjct: 429 DKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIF 488

Query: 625 DRLE 628
           + +E
Sbjct: 489 NSME 492



 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 12/123 (9%)

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
            H+  +  K+  N+L+ +  K   + +A  +F KM     + D  ++ T+I  +   +R+
Sbjct: 20  IHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMP----ERDEFTWNTMIVAYSNSRRL 75

Query: 513 SESEMFFEEAVRFGFIPTKRT--YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           S++E  F         P K T  + ++I GYC+ G+   A   F  M   G  P+    G
Sbjct: 76  SDAEKLFRSN------PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLG 129

Query: 571 TLI 573
           +++
Sbjct: 130 SVL 132



 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 127/302 (42%), Gaps = 30/302 (9%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQT----LNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
           G + EA+ M   MH + M  +  T    LN       EM +   A  L        V   
Sbjct: 307 GLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI-------VKTG 359

Query: 215 SASYRV----MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
            A+Y++    +V  Y K G +  A K    M+++    D  S+T +++     G    AL
Sbjct: 360 YATYKLVNNALVDMYAKRGIMDSALKVFEGMIEK----DVISWTALVTGNTHNGSYDEAL 415

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + F      G+ P+ I   S++    +   ++   ++    +  G+  ++  + +L+   
Sbjct: 416 KLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMY 475

Query: 331 CKKGWTEKAFRLFLKL-VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKE-QGLI 388
            K G  E A  +F  + +R      +++T+T +I GY ++  L  A+     M+   G+ 
Sbjct: 476 TKCGSLEDANVIFNSMEIR------DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGIT 529

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           P    Y  +ID   ++G+F +   L++ M  E   P+   + AI+    K G ++   + 
Sbjct: 530 PGPEHYACMIDLFGRSGDFVKVEQLLHQMEVE---PDATVWKAILAASRKHGNIENGERA 586

Query: 449 LK 450
            K
Sbjct: 587 AK 588


>AT4G01400.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 24 plant
           structures; EXPRESSED DURING: 15 growth stages; CONTAINS
           InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
           Pentatricopeptide repeat (InterPro:IPR002885); BEST
           Arabidopsis thaliana protein match is: Pentatricopeptide
           repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
           26268 Blast hits to 8959 proteins in 289 species: Archae
           - 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
           25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
           BLink). | chr4:573098-577243 REVERSE LENGTH=1110
          Length = 1110

 Score =  109 bits (273), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 10/273 (3%)

Query: 245 GFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCK-RGSIKQ 303
           G+ +    FT +I  + E     + L  F+K  +    P   +   +++ L   RG +++
Sbjct: 114 GYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQK 173

Query: 304 AFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMI 363
           AFE+ +     G  PN  ++  L+   C       A++LF K++   +  P+V +Y  +I
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLE-RDVVPDVDSYKILI 232

Query: 364 NGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS 423
            G+CR  ++N A  LL  M  +G +P+     TLI G C  G F+     +  M  +GFS
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKGFS 288

Query: 424 PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALAL 483
           P+    N +V G C  G+V+EA  +++    NG      T+ ++I   C + D  + + L
Sbjct: 289 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE-DESEKIKL 347

Query: 484 FSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE 516
           F    +  ++ +I   T ++ V    K+M E E
Sbjct: 348 F---LEDAVKEEITGDTRIVDVGIENKKMPEIE 377



 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 5/192 (2%)

Query: 333 KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
           +G+ +KAF LF K  R     PN  +Y  ++  +C +D L+ A  L G+M E+ ++P+ +
Sbjct: 168 RGYLQKAFELF-KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD 226

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDG 452
           +Y  LI G C+ G    A +L++ M  +GF P+      ++ GLC +G   E  K L++ 
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEM 282

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
              G        N L+   C    +++A  +   + K+G      ++  +I + C E   
Sbjct: 283 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDES 342

Query: 513 SESEMFFEEAVR 524
            + ++F E+AV+
Sbjct: 343 EKIKLFLEDAVK 354



 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 5/225 (2%)

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
           N  + +L + +  G       +T LI  + +A   E+       M    F+P     N I
Sbjct: 101 NLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRI 160

Query: 433 VDGLCK-KGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSG 491
           +D L   +G +Q+A+++ K    +G+  +  +YN+L+   C   D+  A  LF KM +  
Sbjct: 161 LDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERD 220

Query: 492 IQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAI 551
           + PD+ SY  LI  FCR+ +++ +    ++ +  GF+P +    ++I G C +G      
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGK 276

Query: 552 KFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           K+   M   G  P       L+ G C   K++EA  + + +++ G
Sbjct: 277 KYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321



 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 97/187 (51%), Gaps = 5/187 (2%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           G L++A E+       G++PNT++ NL+M+  C    +  A  LF +M  R V PD  SY
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
           ++++  +C+ G V  A + L  ML++GF+ D      +I   C++G      +Y  +   
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMIS 284

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
            G  P+      +++G C  G +++A +++E ++  G   +  T   +I  +C +  +EK
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344

Query: 339 AFRLFLK 345
             +LFL+
Sbjct: 345 -IKLFLE 350



 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 10/215 (4%)

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
           YKML+  F    +      ++L+S    +  +++A  LF      G+ P+  SY  L+  
Sbjct: 143 YKMLEFNFTPQPKHLNRILDVLVSH---RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQA 199

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           FC    +S +   F + +    +P   +Y  +I G+CR+G +  A++    M + G VPD
Sbjct: 200 FCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD 259

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYC---KIDDCCSAMV 622
                TLI GLC Q   DE +   + MI KG  P       L   +C   K+++ C  + 
Sbjct: 260 R----TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVE 315

Query: 623 ILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFH 657
           ++ +  + L   T   ++  +C+E +     LF  
Sbjct: 316 VVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLE 350



 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 4/177 (2%)

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G  ++AF+L       G  PN  +YN ++   C    +  AY++        +  D  +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
            ILI   C++  +  A+ L   M   G  PD     TLI   C +    E + + EE + 
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
            GF P       ++ G+C  G +  A      +  +G    S  +  +I  +C + +
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE 341



 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 1/137 (0%)

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK-RMSESEMFFEEA 522
           +  LI  + +    ++ L+ F KM +    P       ++ V    +  + ++   F+ +
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
              G +P  R+Y  ++  +C   +L++A + F +M +   VPD  +Y  LI G C++ ++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241

Query: 583 DEARGLYDSMIEKGLIP 599
           + A  L D M+ KG +P
Sbjct: 242 NGAMELLDDMLNKGFVP 258



 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
           + +++ F   G++  A+E++ +M N+G VP+   +  +    C+ G+ D  +   EEM +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGL----CDQGMFDEGKKYLEEMIS 284

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEK 263
           +G  P  +    +V  +C  G V EA   + V++  G  + + ++ ++I   C +
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE 339



 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 2/165 (1%)

Query: 483 LFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI-CGY 541
           + +K   SG       +T LI V+   K   +    F + + F F P  +    ++    
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCE 601
              G L  A + F     HG +P++ +Y  L+   C    L  A  L+  M+E+ ++P  
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225

Query: 602 VTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSE 646
            +   L   +C+      AM +LD +  K ++    TL+  LC +
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFV-PDRTLIGGLCDQ 269


>AT1G77405.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:29087145-29088521 FORWARD
           LENGTH=458
          Length = 458

 Score =  108 bits (271), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 134/290 (46%), Gaps = 20/290 (6%)

Query: 268 RALRYFHKF-SDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH--- 323
           +AL +F    +  G   N I    M   L K    K  ++ L ++  +    NV T    
Sbjct: 109 KALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASI 168

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
           T L+  L ++G+ ++A   F ++ +  + KP+V  Y  +IN  CR     +A  LL +M+
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRM-KEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQ 227

Query: 384 EQGL--IPNTNTYTTLIDGHCKAG-------NFERAFDLMNLMSRE----GFSPNICTYN 430
             G    P+T TYT LI  +C+ G          R     N M RE    GF P++ TYN
Sbjct: 228 LPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYN 287

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            ++DG CK  R+  A ++ +D    G   ++VTYN  I  +    +I+ A+ +   M K 
Sbjct: 288 CLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKL 347

Query: 491 GIQ-PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMIC 539
           G   P   +YT LI      +R +E+     E V  G +P + TY  ++C
Sbjct: 348 GHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTY-KLVC 396



 Score = 99.4 bits (246), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 142/365 (38%), Gaps = 31/365 (8%)

Query: 104 GSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKE 163
           G   AL FF W   +  F H     I C                M C++    +   L +
Sbjct: 106 GLQKALEFFFWIETHFGFDHNE---ITCRD--------------MACLLAKGNDFKGLWD 148

Query: 164 AVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
            +  V    N   V  T ++  +MK   E G V  A   F  M      PD  +Y  ++ 
Sbjct: 149 FLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIIN 208

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLV--DNASFTLIISEFCEKGFAT-----------RAL 270
           A C++GN  +A   L  M   GF    D  ++T++IS +C  G  T            A 
Sbjct: 209 ALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEAN 268

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           R F +    G  P+++ +  +I+G CK   I +A E+ E+M  +G  PN  T+ + I   
Sbjct: 269 RMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYY 328

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
                 E A  +   + +  +  P   TYT +I+      +   A  L+  M E GL+P 
Sbjct: 329 SVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPR 388

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY  + D     G      + ++   REG          I   + +K  V++ +  + 
Sbjct: 389 EYTYKLVCDALSSEGLASTLDEELHKRMREGIQQRYSRVMKIKPTMARKEVVRKYFHKI- 447

Query: 451 DGFHN 455
           DG  N
Sbjct: 448 DGNQN 452



 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 105/253 (41%), Gaps = 52/253 (20%)

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAI---VDGLCKKGRVQEAYKMLKDGFHNGLEA 459
           K  +F+  +D +  +SR     N+ T  +I   +  L ++G V+EA            + 
Sbjct: 139 KGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKP 198

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQ--PDIHSYTTLIAVFCR--------- 508
           D   YN +I+  C+  + K+A  L  +M   G +  PD ++YT LI+ +CR         
Sbjct: 199 DVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRK 258

Query: 509 --EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDS 566
              +RM E+   F E +  GF+P   TY  +I G C+   +  A++ F  M   GCVP+ 
Sbjct: 259 AIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQ 318

Query: 567 IAYGT------------------------------------LISGLCKQSKLDEARGLYD 590
           + Y +                                    LI  L +  +  EAR L  
Sbjct: 319 VTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVV 378

Query: 591 SMIEKGLIPCEVT 603
            M+E GL+P E T
Sbjct: 379 EMVEAGLVPREYT 391



 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 19/194 (9%)

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF--IPTKRTY 534
           +K+ALA F +M +   +PD+++Y T+I   CR     ++    ++    GF   P   TY
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240

Query: 535 TSMICGYCREGNLT-----------MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
           T +I  YCR G  T            A + F  M   G VPD + Y  LI G CK +++ 
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300

Query: 584 EARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKL-----WIRTATT 638
            A  L++ M  KG +P +VT  +    Y   ++   A+ ++ R  KKL        T T 
Sbjct: 301 RALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMM-RTMKKLGHGVPGSSTYTP 359

Query: 639 LVRKLCSERKVGMA 652
           L+  L   R+   A
Sbjct: 360 LIHALVETRRAAEA 373


>AT3G53170.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:19704600-19706417 REVERSE
           LENGTH=499
          Length = 499

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/429 (21%), Positives = 172/429 (40%), Gaps = 78/429 (18%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
           P  +T   + K+       D A  LFE M + G+ P    Y  ++  Y K          
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGK---------- 191

Query: 238 LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCK 297
                               SE  +K F+T  L Y    SD   KP++  FT +I   CK
Sbjct: 192 --------------------SELLDKAFST--LEYMKSVSD--CKPDVFTFTVLISCCCK 227

Query: 298 RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
            G       ++ EM   G   +  T+  +IDG  K G  E+   +   ++   ++ P+V 
Sbjct: 228 LGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVC 287

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           T  ++I  Y     + + E    R +  G+ P+  T+  LI    KAG +++   +M+ M
Sbjct: 288 TLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFM 347

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
            +  FS    TYN +++   K GR+++   + +   + G++ + +TY  L++ + K   +
Sbjct: 348 EKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLV 407

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
            +  ++  ++  S +  D                      FF                 +
Sbjct: 408 VKIDSVLRQIVNSDVVLDTP--------------------FF---------------NCI 432

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM--IEK 595
           I  Y + G+L    + + +M +  C PD I + T+I       K   A G++D++  +EK
Sbjct: 433 INAYGQAGDLATMKELYIQMEERKCKPDKITFATMI-------KTYTAHGIFDAVQELEK 485

Query: 596 GLIPCEVTR 604
            +I  ++ +
Sbjct: 486 QMISSDIGK 494



 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 147/320 (45%), Gaps = 5/320 (1%)

Query: 294 GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
           G CK+    QA  + E M+ +G KP +  +T+LI    K    +KAF     +    + K
Sbjct: 155 GNCKQPD--QASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCK 212

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           P+V T+T +I+  C+  + +  + ++  M   G+  +T TY T+IDG+ KAG FE    +
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272

Query: 414 MNLMSREGFS-PNICTYNAIVDGLCKKGRVQEAYKMLKDGFH-NGLEADKVTYNILISEH 471
           +  M  +G S P++CT N+I+ G    GR     +     F   G++ D  T+NILI   
Sbjct: 273 LADMIEDGDSLPDVCTLNSII-GSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSF 331

Query: 472 CKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTK 531
            K    K+  ++   M K        +Y  +I  F +  R+ + +  F +    G  P  
Sbjct: 332 GKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNS 391

Query: 532 RTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
            TY S++  Y + G +        ++ +   V D+  +  +I+   +   L   + LY  
Sbjct: 392 ITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQ 451

Query: 592 MIEKGLIPCEVTRITLAYEY 611
           M E+   P ++T  T+   Y
Sbjct: 452 MEERKCKPDKITFATMIKTY 471



 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 48/296 (16%)

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN--GYCRDDKLNRAEMLLGRM 382
           AL + + +  W + A ++F  L +    +P   TYT +    G C+  + ++A +L   M
Sbjct: 114 ALDEAIKENRW-QSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCK--QPDQASLLFEVM 170

Query: 383 KEQGLIPNTNTYTTLIDGH------------------------------------CKAGN 406
             +GL P  + YT+LI  +                                    CK G 
Sbjct: 171 LSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGR 230

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE-ADKVTYN 465
           F+    ++  MS  G   +  TYN I+DG  K G  +E   +L D   +G    D  T N
Sbjct: 231 FDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLN 290

Query: 466 ILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE---KRMSESEMFFEEA 522
            +I  +    ++++  + +S+    G+QPDI ++  LI  F +    K+M     F E+ 
Sbjct: 291 SIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEK- 349

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
            RF F  T  TY  +I  + + G +      F +M   G  P+SI Y +L++   K
Sbjct: 350 -RF-FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403



 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 20/230 (8%)

Query: 83  DPDSLTHEQAVTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQ 142
           D DSL     + ++    GN  +M  +    W   YSRF+            L+G   +Q
Sbjct: 279 DGDSLPDVCTLNSIIGSYGNGRNMRKME--SW---YSRFQ------------LMG---VQ 318

Query: 143 KAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYL 202
                   ++ SF + G  K+   ++  M  +     T T N+V++   + G ++    +
Sbjct: 319 PDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDV 378

Query: 203 FEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCE 262
           F +M  +GV P+S +Y  +V AY K G V++ D  L  +++   ++D   F  II+ + +
Sbjct: 379 FRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQ 438

Query: 263 KGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
            G        + +  +   KP+ I F +MI+     G      E+ ++M+
Sbjct: 439 AGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 488


>AT3G29230.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:11188803-11190605 FORWARD
           LENGTH=600
          Length = 600

 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/463 (22%), Positives = 204/463 (44%), Gaps = 33/463 (7%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++R+ A+  +  +A  +  EM   G+  +  T   ++K       +   + +   +   G
Sbjct: 88  LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147

Query: 211 VHPDSASYRVMVVAYCKMGN--VLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
           +  D      ++  Y + G   V +A K    M +R    D  S+  ++    + G    
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRD 203

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A R F +      + +LI++ +M++G  +   + +AFE+ E+M     + N  + + ++ 
Sbjct: 204 ARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELFEKMP----ERNTVSWSTMVM 255

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
           G  K G  E A  +F K+     N   V+T+T +I GY     L  A+ L+ +M   GL 
Sbjct: 256 GYSKAGDMEMARVMFDKMPLPAKN---VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 312

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
            +     +++    ++G       + +++ R     N    NA++D   K G +++A+  
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAF-- 370

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC- 507
             D F++  + D V++N ++         K+A+ LFS+M + GI+PD     T IAV C 
Sbjct: 371 --DVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPD---KVTFIAVLCS 425

Query: 508 --REKRMSES-EMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
                 + E  + F+     +  +P    Y  ++    R G L  AIK    M      P
Sbjct: 426 CNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME---P 482

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           + + +G L+      +++D A+ + D++++  L PC+    +L
Sbjct: 483 NVVIWGALLGACRMHNEVDIAKEVLDNLVK--LDPCDPGNYSL 523



 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 59/250 (23%)

Query: 389 PNTNTYTTLIDGHCK--------------------AGNFERAFDLM-------------- 414
           PN +   +LI  H +                    A NF   F L               
Sbjct: 80  PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139

Query: 415 -NLMSREGFSPNICTYNAIVD--GLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEH 471
            N + + G S +I   NA++D    C    V++A K+    F    E D V++N ++   
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL----FEKMSERDTVSWNSMLGGL 195

Query: 472 CKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTK 531
            K  +++ A  LF +M     Q D+ S+ T++  + R + MS++   FE+      +P +
Sbjct: 196 VKAGELRDARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELFEK------MPER 245

Query: 532 RT--YTSMICGYCREGNLTMAIKFFHRMSDHGCVP--DSIAYGTLISGLCKQSKLDEARG 587
            T  +++M+ GY + G++ MA   F +M     +P  + + +  +I+G  ++  L EA  
Sbjct: 246 NTVSWSTMVMGYSKAGDMEMARVMFDKMP----LPAKNVVTWTIIIAGYAEKGLLKEADR 301

Query: 588 LYDSMIEKGL 597
           L D M+  GL
Sbjct: 302 LVDQMVASGL 311



 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/266 (19%), Positives = 111/266 (41%), Gaps = 15/266 (5%)

Query: 424 PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALAL 483
           PN+   N+++    +  +  +A+ +  +    GL AD  TY  L+     Q+ +     +
Sbjct: 80  PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139

Query: 484 FSKMAKSGIQPDIHSYTTLIAVF--CREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGY 541
            + + K G+  DI+    LI  +  C    + ++   FE+      +    ++ SM+ G 
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTV----SWNSMLGGL 195

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCE 601
            + G L  A + F  M       D I++ T++ G  +  ++ +A  L++ M E+      
Sbjct: 196 VKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERN----T 247

Query: 602 VTRITLAYEYCKIDDCCSAMVILDRLE-KKLWIRTATTLVRKLCSERKVGMAALFFHKLL 660
           V+  T+   Y K  D   A V+ D++      + T T ++     +  +  A     +++
Sbjct: 248 VSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307

Query: 661 DMDFHVNRVTLAAFMTACYESNKYAL 686
                 +   + + + AC ES   +L
Sbjct: 308 ASGLKFDAAAVISILAACTESGLLSL 333


>AT4G21300.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:11336479-11339052 FORWARD
           LENGTH=857
          Length = 857

 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/525 (21%), Positives = 229/525 (43%), Gaps = 31/525 (5%)

Query: 95  TVASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRS 154
           TV+SL  +    VA S     + Y +     +L+         +  LQK   +   M+  
Sbjct: 163 TVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF---------DRVLQKDCVIWNVMLNG 213

Query: 155 FAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
           +A+ G L   ++    M    + PN  T + V+ +     L+D    L   +   GV  +
Sbjct: 214 YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH 274
            +    ++  Y K G   +A K L  M+ R    D  ++  +IS + + G    +L +F+
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASK-LFRMMSRA---DTVTWNCMISGYVQSGLMEESLTFFY 329

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           +    G+ P+ I F+S++  + K  +++   ++   ++      +++  +ALID   K  
Sbjct: 330 EMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCR 389

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDD-KLNRAEMLLGRMKEQGLIPNTNT 393
               A  +F     S+ N  +V+ +TAMI+GY  +   ++  EM    +K + + PN  T
Sbjct: 390 GVSMAQNIF-----SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEIT 443

Query: 394 YTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN-AIVDGLCKKGRVQEAYKMLKDG 452
             +++         +   +L   + ++GF  N C    A++D   K GR+  AY++    
Sbjct: 444 LVSILPVIGILLALKLGRELHGFIIKKGFD-NRCNIGCAVIDMYAKCGRMNLAYEI---- 498

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
           F    + D V++N +I+   +  +   A+ +F +M  SGI  D  S +  ++        
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE 558

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
           S  +      ++        + +++I  Y + GNL  A+  F  M +   V    ++ ++
Sbjct: 559 SFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV----SWNSI 614

Query: 573 ISGLCKQSKLDEARGLYDSMIEK-GLIPCEVTRITLAYEYCKIDD 616
           I+      KL ++  L+  M+EK G+ P ++T + +    C + D
Sbjct: 615 IAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGD 659



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/437 (21%), Positives = 193/437 (44%), Gaps = 23/437 (5%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
            CM+  + + G ++E++   +EM + G++P+  T + ++    +   ++Y + +   +  
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR 368

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
             +  D      ++ AY K   V  A    S    +   VD   FT +IS +   G    
Sbjct: 369 HSISLDIFLTSALIDAYFKCRGVSMAQNIFS----QCNSVDVVVFTAMISGYLHNGLYID 424

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           +L  F     + + PN I   S++  +    ++K   E+   ++ +G+        A+ID
Sbjct: 425 SLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVID 484

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
              K G    A+ +F +L     +K +++++ +MI    + D  + A  +  +M   G+ 
Sbjct: 485 MYAKCGRMNLAYEIFERL-----SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGIC 539

Query: 389 PNTNTYTTLIDG--HCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
            +  + +  +    +  + +F +A  +   M +   + ++ + + ++D   K G ++ A 
Sbjct: 540 YDCVSISAALSACANLPSESFGKA--IHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAM 597

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA-KSGIQPDIHSYTTLIAV 505
            +    F    E + V++N +I+       +K +L LF +M  KSGI+PD  ++  +I+ 
Sbjct: 598 NV----FKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653

Query: 506 FCREKRMSESEMFFEEAVR-FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
            C    + E   FF      +G  P +  Y  ++  + R G LT A +    M      P
Sbjct: 654 CCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP---FPP 710

Query: 565 DSIAYGTLISGLCKQSK 581
           D+  +GTL+ G C+  K
Sbjct: 711 DAGVWGTLL-GACRLHK 726



 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 100/564 (17%), Positives = 219/564 (38%), Gaps = 54/564 (9%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ SF   G L +A+   F+M   G+ P+  T   ++K    +       +L + +S+ G
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +  +      ++ AY + G +    K    + DR    D   + ++++ + + G     +
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSK----LFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           + F       + PN + F  ++     +  I    ++   +V  G         +L+   
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K G  + A +LF  + R++      +T+  MI+GY +   +  +      M   G++P+
Sbjct: 285 SKCGRFDDASKLFRMMSRADT-----VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             T+++L+    K  N E    +   + R   S +I   +A++D   K   V     M +
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVS----MAQ 395

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP---------------- 494
           + F      D V +  +IS +        +L +F  + K  I P                
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455

Query: 495 ------DIHSYT-------------TLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYT 535
                 ++H +               +I ++ +  RM+ +   FE   +   +    ++ 
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV----SWN 511

Query: 536 SMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
           SMI    +  N + AI  F +M   G   D ++    +S           + ++  MI+ 
Sbjct: 512 SMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKH 571

Query: 596 GLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALF 655
            L     +  TL   Y K  +  +AM +   +++K  I +  +++    +  K+  +   
Sbjct: 572 SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKN-IVSWNSIIAACGNHGKLKDSLCL 630

Query: 656 FHKLLDMD-FHVNRVTLAAFMTAC 678
           FH++++      +++T    +++C
Sbjct: 631 FHEMVEKSGIRPDQITFLEIISSC 654



 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/470 (20%), Positives = 178/470 (37%), Gaps = 102/470 (21%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           + S+I    + G + QA     +M+C G  P+V T   L+   C      K        V
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA-CVALKNFKGIDFLSDTV 164

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
            S     N    +++I  Y    K++    L  R+ ++  +     +  +++G+ K G  
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCV----IWNVMLNGYAKCGAL 220

Query: 408 ERAFDLMNLMSREGFSPNICTY-----------------------------------NAI 432
           +      ++M  +  SPN  T+                                   N++
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
           +    K GR  +A K+    F     AD VT+N +IS + +   ++++L  F +M  SG+
Sbjct: 281 LSMYSKCGRFDDASKL----FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336

Query: 493 QPDIHSYTTLIA-------------VFCREKRMSES-EMFFEEAVRFGFIPTKR------ 532
            PD  ++++L+              + C   R S S ++F   A+   +   +       
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396

Query: 533 -----------TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
                       +T+MI GY   G    +++ F  +      P+ I   +++  +     
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456

Query: 582 LDEARGLYDSMIEKGL-----IPCEVT-------RITLAYEYCKIDDCCSAMVILDRLEK 629
           L   R L+  +I+KG      I C V        R+ LAYE            I +RL K
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE------------IFERLSK 504

Query: 630 KLWIRTATTLVRKLCSERKVGMAAL-FFHKLLDMDFHVNRVTLAAFMTAC 678
           +  +   + + R  C++     AA+  F ++       + V+++A ++AC
Sbjct: 505 RDIVSWNSMITR--CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552



 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/336 (20%), Positives = 138/336 (41%), Gaps = 21/336 (6%)

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
           R +  + ++  + ++I+ + R+  LN+A     +M   G+ P+ +T+  L+       NF
Sbjct: 95  RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 154

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           +    L + +S  G   N    ++++    + G++    K+    F   L+ D V +N++
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKL----FDRVLQKDCVIWNVM 210

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF 527
           ++ + K   +   +  FS M    I P+  ++  +++V   +  +          V  G 
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
                   S++  Y + G    A K F  MS      D++ +  +ISG  +   ++E+  
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR----ADTVTWNCMISGYVQSGLMEESLT 326

Query: 588 LYDSMIEKGLIPCEVTRITLA--------YEYCKIDDCCSAMVILDRLEKKLWIRTATTL 639
            +  MI  G++P  +T  +L          EYCK   C      + R    L I   + L
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHC-----YIMRHSISLDIFLTSAL 381

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
           +      R V MA   F +   +D  V    ++ ++
Sbjct: 382 IDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL 417


>AT1G80550.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:30285358-30286704 REVERSE
           LENGTH=448
          Length = 448

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 148/354 (41%), Gaps = 43/354 (12%)

Query: 249 DNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           ++ +F ++   +        A+  + K  D  L+ +  +F ++++ LC+   + +A E+ 
Sbjct: 116 NHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELC 174

Query: 309 --EEMVCQGWK-PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMING 365
             + ++  G+   N   H  ++ G  K GW                             G
Sbjct: 175 FGKNVIGNGFSVSNTKIHNLILRGWSKLGWW----------------------------G 206

Query: 366 YCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPN 425
            C++           +M  +G+  +  +Y+  +D  CK+G   +A  L   M       +
Sbjct: 207 KCKE--------YWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLD 258

Query: 426 ICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFS 485
           +  YN ++  +     V+   ++ ++    G E +  T+N +I   C+   ++ A  +  
Sbjct: 259 VVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLD 318

Query: 486 KMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREG 545
           +M K G QPD  +Y  L   F R ++ SE    F   +R G  P   TY  ++  + R G
Sbjct: 319 EMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWG 375

Query: 546 NLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            L   +  +  M + G  PDS AY  +I  L ++  LD AR   + MIE+GL P
Sbjct: 376 FLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429



 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/393 (20%), Positives = 170/393 (43%), Gaps = 22/393 (5%)

Query: 83  DPDSLTHEQAVTTVASLAGNAGSMVALSFFHWAIGYSRFRH----FMRLYIVCA------ 132
           + D  +++Q     A    +     AL FF+W    S FRH    F R+  +        
Sbjct: 39  EEDQSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFE 98

Query: 133 ------TSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLV 186
                   +IGN      H   + + + +     ++EA++   ++ +  +   T   NLV
Sbjct: 99  ISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLV 158

Query: 187 MKIACEMGLVDYAQYLF-EEMSARGVH-PDSASYRVMVVAYCKMGNVLEADKWLSVMLDR 244
             +     +V+  +  F + +   G    ++  + +++  + K+G   +  ++   M   
Sbjct: 159 DALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTE 218

Query: 245 GFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQA 304
           G   D  S+++ +   C+ G   +A++ + +     +K +++ + ++I  +     ++  
Sbjct: 219 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278

Query: 305 FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN 364
             +  EM  +G +PNV TH  +I  LC+ G    A+R+  ++ +    +P+ +TY  +  
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK-RGCQPDSITYMCL-- 335

Query: 365 GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP 424
            + R +K +    L GRM   G+ P  +TY  L+    + G  +    +   M   G +P
Sbjct: 336 -FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTP 394

Query: 425 NICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           +   YNA++D L +KG +  A +  ++    GL
Sbjct: 395 DSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427



 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 5/275 (1%)

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM-KEQGLIPNTNTYT 395
           +KA   F  + R    +    T+  +I+   +  +   +  L+ RM      +PN  T+ 
Sbjct: 62  QKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFR 121

Query: 396 TLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML--KDGF 453
            +   +  A   + A D  + +           YN +VD LC+   V EA ++   K+  
Sbjct: 122 IVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVI 180

Query: 454 HNGLE-ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
            NG   ++   +N+++    K     +    + KM   G+  D+ SY+  + + C+  + 
Sbjct: 181 GNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKP 240

Query: 513 SESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTL 572
            ++   ++E            Y ++I        +   I+ F  M + GC P+   + T+
Sbjct: 241 WKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTI 300

Query: 573 ISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           I  LC+  ++ +A  + D M ++G  P  +T + L
Sbjct: 301 IKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL 335


>AT3G46610.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr3:17160224-17162221 REVERSE
           LENGTH=665
          Length = 665

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/471 (21%), Positives = 187/471 (39%), Gaps = 79/471 (16%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           EA +++ +M  +G+VPN  T N +M I  E G    A  + +    +G  P+  +Y   +
Sbjct: 202 EAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTAL 261

Query: 223 VAYCKMGNVLEADKWL----------SVMLDRGFLVDNASFTLI-----ISEFC------ 261
           + Y +M + + A ++            +  D G+   +  F  +     I   C      
Sbjct: 262 LVYRRMEDGMGALEFFVELREKYAKREIGNDVGY---DWEFEFVKLENFIGRICYQVMRR 318

Query: 262 ----EKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGS-----------IKQAFE 306
               +  + TR L+  +     G++P+      +I   C R             I++ F 
Sbjct: 319 WLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWA-CTREEHYIVGKELYKRIRERFS 377

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
            +   VC         H   + G  KK W   A  ++  L+  E  +PN L+Y  +++  
Sbjct: 378 EISLSVC--------NHLIWLMGKAKKWWA--ALEIYEDLL-DEGPEPNNLSYELVVS-- 424

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
                                      +  L+    K G +     L+N M  +G  P  
Sbjct: 425 --------------------------HFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQR 458

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK 486
             +NA++    K      A ++ K    NG +   ++Y  L+S   K     +A  +++ 
Sbjct: 459 RHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNH 518

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           M K GI+P++++YTT+ +V   +++ +  +   +E    G  P+  T+ ++I G  R G 
Sbjct: 519 MIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGL 578

Query: 547 LTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
             +A ++FHRM      P+ I Y  LI  L   +K   A  L+     +GL
Sbjct: 579 SGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGL 629



 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 8/242 (3%)

Query: 269 ALRYFHKFSDMGLKPNLIN-------FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVY 321
           AL  +    D G +PN ++       F  ++    KRG  +    +L +M  +G KP   
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
              A++    K   T  A ++F  +V     KP V++Y A+++   +    + A  +   
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMV-DNGEKPTVISYGALLSALEKGKLYDEAFRVWNH 518

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
           M + G+ PN   YTT+         F     L+  M+ +G  P++ T+NA++ G  + G 
Sbjct: 519 MIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGL 578

Query: 442 VQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTT 501
              AY+         +E +++TY +LI      A  + A  L  K    G++     Y  
Sbjct: 579 SGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDA 638

Query: 502 LI 503
           ++
Sbjct: 639 VV 640



 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 95/474 (20%), Positives = 192/474 (40%), Gaps = 36/474 (7%)

Query: 146 EVMQCMVRSFAEIGRLKEAVEMVFEMHNQ-----GMV-PNTQTLNLVMKIACEMGLVDYA 199
           +V   M++ F +  RLK AV +V  +  +     G++ PN    N ++      G    A
Sbjct: 147 QVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFG---EA 203

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT--LII 257
           + + ++M   G+ P+  +Y  ++V Y + G  L+A   L +  ++GF  +  +++  L++
Sbjct: 204 EKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLV 263

Query: 258 SEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWK 317
               E G    AL +F +  +   K  + N              +  F  LE  + +   
Sbjct: 264 YRRMEDGMG--ALEFFVELREKYAKREIGNDVGY--------DWEFEFVKLENFIGR--- 310

Query: 318 PNVYTHTALIDGLCKK-GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAE 376
                +  +   L K   WT +  +L L  + S   +P+   +  +I    R++     +
Sbjct: 311 ---ICYQVMRRWLVKDDNWTTRVLKL-LNAMDSAGVRPSREEHERLIWACTREEHYIVGK 366

Query: 377 MLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTY------- 429
            L  R++E+    + +    LI    KA  +  A ++   +  EG  PN  +Y       
Sbjct: 367 ELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHF 426

Query: 430 NAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAK 489
           N ++    K+G  +   ++L      GL+  +  +N ++    K ++   A+ +F  M  
Sbjct: 427 NILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVD 486

Query: 490 SGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTM 549
           +G +P + SY  L++   + K   E+   +   ++ G  P    YT+M      +    +
Sbjct: 487 NGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNL 546

Query: 550 AIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
                  M+  G  P  + +  +ISG  +      A   +  M  + + P E+T
Sbjct: 547 LDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEIT 600



 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 100/452 (22%), Positives = 182/452 (40%), Gaps = 54/452 (11%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRL 342
           PNL  + S++  +  RG   +A ++L++M  +G  PN+ T+  L+    ++G   KA  +
Sbjct: 185 PNLFIYNSLLGAM--RG-FGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGI 241

Query: 343 FLKLVRSENNKPNVLTYTAMINGYCR-DDKLNRAEMLLGRMKEQGL---IPNTNTYTTLI 398
            L L + +  +PN +TY+  +  Y R +D +   E  +  ++E+     I N   Y    
Sbjct: 242 -LDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFV-ELREKYAKREIGNDVGYDWEF 299

Query: 399 DGHCKAGNF--------------------ERAFDLMNLMSREGFSPNICTYNAIVDGLCK 438
           +   K  NF                     R   L+N M   G  P+   +  ++    +
Sbjct: 300 E-FVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTR 358

Query: 439 KGRV---QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
           +      +E YK +++ F    E      N LI    K      AL ++  +   G +P+
Sbjct: 359 EEHYIVGKELYKRIRERFS---EISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPN 415

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRF-------GFIPTKRTYTSMICGYCREGNLT 548
             SY  +++ F      +     +   VR        G  P +R + +++    +    T
Sbjct: 416 NLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETT 475

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
            AI+ F  M D+G  P  I+YG L+S L K    DEA  +++ MI+ G+ P      T+A
Sbjct: 476 AAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMA 535

Query: 609 YEYCKIDDCCSAMVILDRLEKKLW-------IRTATTLVRKLCSERKVGMAALFFHKLLD 661
                +        +LD L K++        + T   ++         G+A  +FH++  
Sbjct: 536 ----SVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKS 591

Query: 662 MDFHVNRVTLAAFMTACYESNKYALVSDLSAR 693
            +   N +T    + A     K  L  +L  +
Sbjct: 592 ENVEPNEITYEMLIEALANDAKPRLAYELHVK 623


>AT1G68930.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr1:25918314-25920545 FORWARD LENGTH=743
          Length = 743

 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 162/357 (45%), Gaps = 13/357 (3%)

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
           ++ L RG   D+ S+  +I    + G A  A+  F +    GLK +   F S++      
Sbjct: 224 ALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGL 283

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLT 358
           G+I +  ++   ++   ++ ++Y  +ALID  CK      A  +F ++      + NV++
Sbjct: 284 GAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM-----KQKNVVS 338

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           +TAM+ GY +  +   A  +   M+  G+ P+  T    I       + E          
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
             G    +   N++V    K G + ++ ++    F+     D V++  ++S + +     
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRL----FNEMNVRDAVSWTAMVSAYAQFGRAV 454

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFE-EAVRFGFIPTKRTYTSM 537
           + + LF KM + G++PD  + T +I+   R   + + + +F+     +G +P+   Y+ M
Sbjct: 455 ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCM 514

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
           I  + R G L  A++F + M      PD+I + TL+S    +  L+  +   +S+IE
Sbjct: 515 IDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568



 Score = 86.3 bits (212), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 98/505 (19%), Positives = 195/505 (38%), Gaps = 65/505 (12%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
           P T   N ++     M    YA+ +F+ +      P+  S+  +++AY K G + E +  
Sbjct: 39  PETFLYNNIVHAYALMKSSTYARRVFDRIP----QPNLFSWNNLLLAYSKAGLISEMEST 94

Query: 238 LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKF-SDMGLKPNLINFTSMIEGLC 296
              + DR    D  ++ ++I  +   G    A++ ++    D       +   +M++   
Sbjct: 95  FEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSS 150

Query: 297 KRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNV 356
             G +    ++  +++  G++  +   + L+      G    A ++F             
Sbjct: 151 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF------------- 197

Query: 357 LTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNL 416
                    Y  DD+                  NT  Y +L+ G    G  E A  L   
Sbjct: 198 ---------YGLDDR------------------NTVMYNSLMGGLLACGMIEDALQLFRG 230

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           M ++  S     + A++ GL + G  +EA +  ++    GL+ D+  +  ++        
Sbjct: 231 MEKDSVS-----WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGA 285

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
           I +   + + + ++  Q  I+  + LI ++C+ K +  ++  F+   +   +    ++T+
Sbjct: 286 INEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV----SWTA 341

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           M+ GY + G    A+K F  M   G  PD    G  IS     S L+E    +   I  G
Sbjct: 342 MVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG 401

Query: 597 LIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAA--- 653
           LI       +L   Y K  D   +     RL  ++ +R A +    + +  + G A    
Sbjct: 402 LIHYVTVSNSLVTLYGKCGDIDDST----RLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457

Query: 654 LFFHKLLDMDFHVNRVTLAAFMTAC 678
             F K++      + VTL   ++AC
Sbjct: 458 QLFDKMVQHGLKPDGVTLTGVISAC 482



 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/378 (21%), Positives = 160/378 (42%), Gaps = 24/378 (6%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
            ++K       M++  A+ G  KEA+E   EM  QG+  +      V+     +G ++  
Sbjct: 230 GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
           + +   +              ++  YCK     +   +   + DR    +  S+T ++  
Sbjct: 290 KQIHACIIRTNFQDHIYVGSALIDMYCK----CKCLHYAKTVFDRMKQKNVVSWTAMVVG 345

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
           + + G A  A++ F      G+ P+       I       S+++  +   + +  G    
Sbjct: 346 YGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY 405

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
           V    +L+    K G  + + RLF     +E N  + +++TAM++ Y +  +      L 
Sbjct: 406 VTVSNSLVTLYGKCGDIDDSTRLF-----NEMNVRDAVSWTAMVSAYAQFGRAVETIQLF 460

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE-GFSPNICTYNAIVDGLCK 438
            +M + GL P+  T T +I    +AG  E+      LM+ E G  P+I  Y+ ++D   +
Sbjct: 461 DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR 520

Query: 439 KGRVQEAYKMLKDGFHNGL--EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI 496
            GR++EA +     F NG+    D + +  L+S  C+    K  L +    A+S I+ D 
Sbjct: 521 SGRLEEAMR-----FINGMPFPPDAIGWTTLLSA-CRN---KGNLEIGKWAAESLIELDP 571

Query: 497 H---SYTTLIAVFCREKR 511
           H    YT L +++  + +
Sbjct: 572 HHPAGYTLLSSIYASKGK 589



 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 21/197 (10%)

Query: 81  SIDPDSLTHEQAVTTVASLAGNAGSMVALSFFHWAIGYSRFRHFMR-------LYIVC-- 131
            IDPD  T  QA++  A    N  S+   S FH     S   H++        LY  C  
Sbjct: 366 GIDPDHYTLGQAISACA----NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421

Query: 132 ---ATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMK 188
              +T L    N++ A      MV ++A+ GR  E +++  +M   G+ P+  TL  V+ 
Sbjct: 422 IDDSTRLFNEMNVRDAVS-WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480

Query: 189 IACEMGLVDYAQYLFEEMSAR-GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFL 247
                GLV+  Q  F+ M++  G+ P    Y  M+  + + G + EA ++++ M    F 
Sbjct: 481 ACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM---PFP 537

Query: 248 VDNASFTLIISEFCEKG 264
            D   +T ++S    KG
Sbjct: 538 PDAIGWTTLLSACRNKG 554


>AT3G14580.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:4903012-4904229 FORWARD
           LENGTH=405
          Length = 405

 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 101/192 (52%)

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
           LI G C++GN E A  L++   ++   PN+ T++ ++ G C KG+ +EA+K+L+      
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267

Query: 457 LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE 516
           +E D +T+NILIS   K+  +++ + L  +M   G +P+  +Y  ++     +KR  E++
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327

Query: 517 MFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
               + + +G  P+  +Y  M+ G C   ++        +M +HG VP ++ +  ++  +
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCV 387

Query: 577 CKQSKLDEARGL 588
             ++  D    L
Sbjct: 388 VSKNNDDSQANL 399



 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 117/240 (48%), Gaps = 1/240 (0%)

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS 277
           Y +M +     G +  A + L  M D G    + SF  I++            + F    
Sbjct: 135 YNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAP 194

Query: 278 DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTE 337
            +G++ +      +I+GLC+ G+++ A ++L+E   Q  +PNV T + LI G C KG  E
Sbjct: 195 KLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFE 254

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
           +AF+L L+ +  E  +P+ +T+  +I+G  +  ++     LL RMK +G  PN  TY  +
Sbjct: 255 EAFKL-LERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEV 313

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           + G         A ++M+ M   G  P+  +Y  +V GLC+   V E   +L+   ++G 
Sbjct: 314 LYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373



 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 36/282 (12%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASY 218
           GR+  A+E++F M + G  P++++ N ++ +     L D    +F      GV       
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVE------ 199

Query: 219 RVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSD 278
                                        +D     ++I   CE G    AL+   +F  
Sbjct: 200 -----------------------------IDACCLNILIKGLCESGNLEAALQLLDEFPQ 230

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
              +PN++ F+ +I G C +G  ++AF++LE M  +  +P+  T   LI GL KKG  E+
Sbjct: 231 QKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEE 290

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
              L L+ ++ +  +PN  TY  ++ G     +   A+ ++ +M   G+ P+  +Y  ++
Sbjct: 291 GIDL-LERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMV 349

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
            G C+  +      ++  M   GF P    +  +V  +  K 
Sbjct: 350 LGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKN 391



 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 36/275 (13%)

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
           G   RA+       D G  P+  +F  ++  L       +  ++       G + +    
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
             LI GLC+ G  E A +L L     + ++PNV+T++ +I G+C   K   A  LL RM+
Sbjct: 206 NILIKGLCESGNLEAALQL-LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
           ++ + P+T T+  LI G  K G  E   DL+  M  +G  PN  TY  ++ GL  K R  
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
           EA +M+                                   S+M   G++P   SY  ++
Sbjct: 325 EAKEMM-----------------------------------SQMISWGMRPSFLSYKKMV 349

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMI 538
              C  K + E +    + V  GF+P    +  ++
Sbjct: 350 LGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384



 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 90/196 (45%)

Query: 404 AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
           AG   RA +++  M   G  P+  ++N I++ L       E +K+       G+E D   
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
            NILI   C+  +++ AL L  +  +   +P++ +++ LI  FC + +  E+    E   
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264

Query: 524 RFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLD 583
           +    P   T+  +I G  ++G +   I    RM   GC P+   Y  ++ GL  + +  
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324

Query: 584 EARGLYDSMIEKGLIP 599
           EA+ +   MI  G+ P
Sbjct: 325 EAKEMMSQMISWGMRP 340



 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 80/171 (46%)

Query: 148 MQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS 207
           +  +++   E G L+ A++++ E   Q   PN  T + +++  C  G  + A  L E M 
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264

Query: 208 ARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFAT 267
              + PD+ ++ +++    K G V E    L  M  +G   +  ++  ++    +K    
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324

Query: 268 RALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
            A     +    G++P+ +++  M+ GLC+  S+ +   +L +MV  G+ P
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375


>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
           chr1:22865326-22866552 REVERSE LENGTH=408
          Length = 408

 Score =  106 bits (265), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)

Query: 162 KEAVEMVFEMHNQ-GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRV 220
           KEA  +  EM    G+ P+ +T N ++K+ CE G    +  +  EM  +G+ P+S+S+ +
Sbjct: 168 KEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGL 227

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           M+  +       E  K L++M DRG  +  +++ + I   C++  +  A          G
Sbjct: 228 MISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG 287

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF 340
           +KPN + ++ +I G C     ++A ++ + MV +G KP+   +  LI  LCK G  E A 
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETAL 347

Query: 341 RLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
            L  K    +N  P+     +++NG  +D K+  A+ L+G++KE+
Sbjct: 348 SL-CKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391



 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 103/210 (49%)

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEA 445
           G+ P+  TY  +I   C++G+   ++ ++  M R+G  PN  ++  ++ G   + +  E 
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241

Query: 446 YKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV 505
            K+L      G+     TYNI I   CK+   K+A AL   M  +G++P+  +Y+ LI  
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           FC E    E++  F+  V  G  P    Y ++I   C+ G+   A+       +   VP 
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
                +L++GL K SK++EA+ L   + EK
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391



 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 84/179 (46%)

Query: 421 GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQA 480
           G  P++ TYN ++   C+ G    +Y ++ +    G++ +  ++ ++IS    +    + 
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241

Query: 481 LALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICG 540
             + + M   G+   + +Y   I   C+ K+  E++   +  +  G  P   TY+ +I G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301

Query: 541 YCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
           +C E +   A K F  M + GC PDS  Y TLI  LCK    + A  L    +EK  +P
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 64/142 (45%), Gaps = 1/142 (0%)

Query: 476 DIKQALALFSKMAKS-GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
           D K+A  ++ +M K  GI+PD+ +Y  +I VFC     S S     E  R G  P   ++
Sbjct: 166 DYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSF 225

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
             MI G+  E       K    M D G       Y   I  LCK+ K  EA+ L D M+ 
Sbjct: 226 GLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLS 285

Query: 595 KGLIPCEVTRITLAYEYCKIDD 616
            G+ P  VT   L + +C  DD
Sbjct: 286 AGMKPNTVTYSHLIHGFCNEDD 307



 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 11/204 (5%)

Query: 456 GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSES 515
           G+E D  TYN +I   C+      + ++ ++M + GI+P+  S+  +I+ F  E +  E 
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241

Query: 516 ----EMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGT 571
                M  +  V  G      TY   I   C+      A      M   G  P+++ Y  
Sbjct: 242 GKVLAMMKDRGVNIGV----STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSH 297

Query: 572 LISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKL 631
           LI G C +   +EA+ L+  M+ +G  P      TL Y  CK  D  +A+ +     +K 
Sbjct: 298 LIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKN 357

Query: 632 WIRTAT---TLVRKLCSERKVGMA 652
           W+ + +   +LV  L  + KV  A
Sbjct: 358 WVPSFSIMKSLVNGLAKDSKVEEA 381



 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 74/158 (46%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+  F    +  E  +++  M ++G+     T N+ ++  C+      A+ L + M + G
Sbjct: 228 MISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG 287

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P++ +Y  ++  +C   +  EA K   +M++RG   D+  +  +I   C+ G    AL
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETAL 347

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
               +  +    P+     S++ GL K   +++A E++
Sbjct: 348 SLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385


>AT3G09040.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:2761195-2764281 REVERSE
           LENGTH=1028
          Length = 1028

 Score =  106 bits (264), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 103/457 (22%), Positives = 199/457 (43%), Gaps = 22/457 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           +V  +A+  R+ +A   VFE     + PNT     +     + GL + A  +FE M   G
Sbjct: 201 LVDMYAKCDRISDA-RRVFEWI---VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             PD  ++  ++  Y ++G + +A      M       D  ++ ++IS   ++G  T A+
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSP----DVVAWNVMISGHGKRGCETVAI 312

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
            YF       +K       S++  +    ++     +  E +  G   N+Y  ++L+   
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K    E A ++F  L      + N + + AMI GY  + + ++   L   MK  G   +
Sbjct: 373 SKCEKMEAAAKVFEAL-----EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             T+T+L+     + + E      +++ ++  + N+   NA+VD   K G +++A ++  
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI-- 485

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
             F    + D VT+N +I  + +  +  +A  LF +M   GI  D     + +       
Sbjct: 486 --FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVH 543

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
            + + +     +V+ G      T +S+I  Y + G +  A K F  + +   V    +  
Sbjct: 544 GLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV----SMN 599

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
            LI+G   Q+ L+EA  L+  M+ +G+ P E+T  T+
Sbjct: 600 ALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATI 635



 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 115/644 (17%), Positives = 239/644 (37%), Gaps = 39/644 (6%)

Query: 56  RVCALVCDSFHQHTHMRVSPPRLHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFFHWA 115
            +C   C  F         P RL L++      H +++       G  G+ +        
Sbjct: 50  EICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAI-------- 101

Query: 116 IGYSRFRHFMRLYIVCATSLIGNGN---LQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMH 172
                    + LY  CA           L+K       M+  ++ IG+  + +     + 
Sbjct: 102 ---------VDLYAKCAQVSYAEKQFDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLF 152

Query: 173 NQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVL 232
              + PN  T ++V+        V++ + +   M   G+  +S     +V  Y K   + 
Sbjct: 153 ENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRIS 212

Query: 233 EADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMI 292
           +A +    ++D     +   +T + S + + G    A+  F +  D G +P+ + F ++I
Sbjct: 213 DARRVFEWIVDP----NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI 268

Query: 293 EGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN 352
               + G +K A  +  EM      P+V     +I G  K+G    A   F  + R  + 
Sbjct: 269 NTYIRLGKLKDARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNM-RKSSV 323

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
           K    T  ++++       L+   ++     + GL  N    ++L+  + K    E A  
Sbjct: 324 KSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAK 383

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           +   +  +    N   +NA++ G    G   +  ++  D   +G   D  T+  L+S   
Sbjct: 384 VFEALEEK----NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
              D++      S + K  +  ++     L+ ++ +   + ++   FE       +    
Sbjct: 440 ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV---- 495

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           T+ ++I  Y ++ N + A   F RM+  G V D     + +        L + + ++   
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555

Query: 593 IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMA 652
           ++ GL     T  +L   Y K      A  +   L +  W   +   +    S+  +  A
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE--WSVVSMNALIAGYSQNNLEEA 613

Query: 653 ALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSARIYK 696
            + F ++L    + + +T A  + AC++     L +    +I K
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK 657



 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 128/647 (19%), Positives = 248/647 (38%), Gaps = 132/647 (20%)

Query: 150 CMVRSFAEIGRLKEAVEMVFE-MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
           C+   + + G  +EAV +VFE M ++G  P+      V+     +G +  A+ LF EMS+
Sbjct: 231 CLFSGYVKAGLPEEAV-LVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS 289

Query: 209 RGVHPDSASYRVMVVAYCK-------------------------MGNVLEADKWLSVMLD 243
               PD  ++ VM+  + K                         +G+VL A   +   LD
Sbjct: 290 ----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG-IVANLD 344

Query: 244 RGFLVDNASFTL-----------IISEF--CEKGFATRALRYFHKFSDMGLKPNLINFTS 290
            G +V   +  L           ++S +  CEK  A  A + F    +     N + + +
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEA--AAKVFEALEE----KNDVFWNA 398

Query: 291 MIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 350
           MI G    G   +  E+  +M   G+  + +T T+L+   C      +    F  ++  +
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL-STCAASHDLEMGSQFHSIIIKK 457

Query: 351 NNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA 410
               N+    A+++ Y +   L  A  +  RM ++    +  T+ T+I  + +  N   A
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR----DNVTWNTIIGSYVQDENESEA 513

Query: 411 FDLMNLMS-----------------------------------REGFSPNICTYNAIVDG 435
           FDL   M+                                   + G   ++ T ++++D 
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM 573

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
             K G +++A K+    F +  E   V+ N LI+ +  Q ++++A+ LF +M   G+ P 
Sbjct: 574 YSKCGIIKDARKV----FSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPS 628

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGF---------------------------- 527
             ++ T++    + + ++    F  +  + GF                            
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688

Query: 528 --IPTKRT---YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
             + + ++   +T M+ G+ + G    A+KF+  M   G +PD   + T++      S L
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL 748

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRK 642
            E R ++  +        E+T  TL   Y K  D   +  + D + ++  + +  +L+  
Sbjct: 749 REGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808

Query: 643 LCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSD 689
                    A   F  +       + +T    +TAC  + K   VSD
Sbjct: 809 YAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK---VSD 852



 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/505 (19%), Positives = 209/505 (41%), Gaps = 57/505 (11%)

Query: 141 LQKAHEVM-QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIAC-----EMG 194
           L++ ++V    M+R +A  G   + +E+  +M + G   +  T   ++         EMG
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT 254
              +   + ++  A+ +   +A    +V  Y K G + +A +    M DR    DN ++ 
Sbjct: 448 -SQFHSIIIKKKLAKNLFVGNA----LVDMYAKCGALEDARQIFERMCDR----DNVTWN 498

Query: 255 LIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ 314
            II  + +    + A   F + +  G+  +     S ++       + Q  ++    V  
Sbjct: 499 TIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC 558

Query: 315 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR 374
           G   +++T ++LID   K G  + A ++F  L      + +V++  A+I GY +++ L  
Sbjct: 559 GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL-----PEWSVVSMNALIAGYSQNN-LEE 612

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP---------- 424
           A +L   M  +G+ P+  T+ T+++   K  +          +++ GFS           
Sbjct: 613 AVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLL 672

Query: 425 -----------------------NICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
                                  +I  +  ++ G  + G  +EA K  K+  H+G+  D+
Sbjct: 673 GMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQ 732

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
            T+  ++      + +++  A+ S +       D  +  TLI ++ +   M  S   F+E
Sbjct: 733 ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE 792

Query: 522 AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
             R   + +   + S+I GY + G    A+K F  M     +PD I +  +++      K
Sbjct: 793 MRRRSNVVS---WNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK 849

Query: 582 LDEARGLYDSMIEKGLIPCEVTRIT 606
           + + R +++ MI +  I   V  + 
Sbjct: 850 VSDGRKIFEMMIGQYGIEARVDHVA 874


>AT3G13160.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:4229994-4231178 REVERSE
           LENGTH=394
          Length = 394

 Score =  106 bits (264), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 124/269 (46%), Gaps = 12/269 (4%)

Query: 338 KAFRLFLKLVRSENNKPNVLT---YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
           K F    +++  +N  PN+        +IN Y R      A+ +   M E+       ++
Sbjct: 85  KKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSF 144

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSRE-----GFSPNICTYNAIVDGLCKKGRVQEAYKML 449
             L++    +    + FDL+  + +E        P++ +YN ++ GLC KG   EA  ++
Sbjct: 145 NALLNACVNS----KKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALI 200

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
            +  + GL+ D +T+NIL+ E   +   ++   ++++M +  ++ DI SY   +     E
Sbjct: 201 DEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAME 260

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
            +  E    F++       P   T+T+MI G+  EG L  AI ++  +  +GC P    +
Sbjct: 261 NKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVF 320

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLI 598
            +L+  +CK   L+ A  L   +  K L+
Sbjct: 321 NSLLPAICKAGDLESAYELCKEIFAKRLL 349



 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 146/306 (47%), Gaps = 6/306 (1%)

Query: 290 SMIEGLCKRGSIKQAFEMLEEMVCQGWK-PNVYTH---TALIDGLCKKGWTEKAFRLFLK 345
           ++ E   +R +  + FE +EE++ +  K PN+        +I+   + G  E A ++F +
Sbjct: 72  AVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDE 131

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ-GLIPNTNTYTTLIDGHCKA 404
           +    N K   L++ A++N      K +  E +   +  +  + P+  +Y TLI G C  
Sbjct: 132 MP-ERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGK 190

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G+F  A  L++ +  +G  P+  T+N ++     KG+ +E  ++        ++ D  +Y
Sbjct: 191 GSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSY 250

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           N  +     +   ++ ++LF K+  + ++PD+ ++T +I  F  E ++ E+  +++E  +
Sbjct: 251 NARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEK 310

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
            G  P K  + S++   C+ G+L  A +    +     + D      ++  L K SK DE
Sbjct: 311 NGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDE 370

Query: 585 ARGLYD 590
           A  + +
Sbjct: 371 AEEIVE 376



 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/301 (17%), Positives = 123/301 (40%), Gaps = 37/301 (12%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR- 209
           ++  +  +G  + A ++  EM  +       + N ++         D  + +F+E+  + 
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
            + PD ASY  ++   C  G+  EA   +  + ++G   D+ +F +++ E   KG     
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
            + + +  +  +K ++ ++ + + GL      ++   + +++     KP+V+T TA+I G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
              +G                                    KL+ A      +++ G  P
Sbjct: 292 FVSEG------------------------------------KLDEAITWYKEIEKNGCRP 315

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
               + +L+   CKAG+ E A++L   +  +    +      +VD L K  +  EA +++
Sbjct: 316 LKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIV 375

Query: 450 K 450
           +
Sbjct: 376 E 376


>AT2G28050.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:11938265-11939653 REVERSE
           LENGTH=462
          Length = 462

 Score =  106 bits (264), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 136/279 (48%), Gaps = 3/279 (1%)

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS 277
           +  M++ Y   G   E  +    M +    +D  + TL +           A  +F    
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201

Query: 278 DMGLKP-NLINFTSMIEGLCKRGSIKQAFEMLEEM-VCQGWKPNVYTHTALIDGLCKKGW 335
           + G+    + + T ++  LC  G I +A E++EEM + +G K N+ T  ++I G C K W
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRW 260

Query: 336 TEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYT 395
             +   L LKL+  E+   ++ +Y  +I+G+    K+  AE L+  M ++ L   +  Y 
Sbjct: 261 DFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYN 320

Query: 396 TLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN 455
            +++G+ + G  E+  +L + MS  G +PN  TY  +++GLCK G+V EA   L +   N
Sbjct: 321 LIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVN 380

Query: 456 GLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP 494
             E D+  Y+ L  E  +   I ++L + ++M + G  P
Sbjct: 381 EFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIP 419



 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 142/313 (45%), Gaps = 2/313 (0%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           F SMI      G   +  E+ E M     K +  T T  +  L +    E A   F  +V
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK-EQGLIPNTNTYTTLIDGHCKAGN 406
            S  +   V + T ++   C + ++ RA  L+  M   +G+  N  T+ ++I    K  +
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261

Query: 407 FERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNI 466
           FE    ++ LM +E    ++ +Y  ++DG    G+V+EA +++       L  +   YN+
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNL 321

Query: 467 LISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFG 526
           +++ + +   +++ + L+S+M+  G+ P+  +Y  L+   C+  ++ E+  F  E     
Sbjct: 322 IMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE 381

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR 586
           F   +  Y+++     R G +  +++    M   G +P +     L   L + ++  EA+
Sbjct: 382 FEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNR-KEAQ 440

Query: 587 GLYDSMIEKGLIP 599
            L   +++ G+ P
Sbjct: 441 MLITIVVKCGIKP 453



 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 3/253 (1%)

Query: 177 VPNTQTLNLVMKIACEMGLVDYAQYLFEEMS-ARGVHPDSASYRVMVVAYCKMGNVLEAD 235
           V    +L +V+ + C  G +  A+ L EEM   +GV  +  +++ M+    K  +  E D
Sbjct: 207 VVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELD 266

Query: 236 KWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
             L +M     ++D  S+ ++I  F   G    A R      D  L+     +  ++ G 
Sbjct: 267 LVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGY 326

Query: 296 CKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPN 355
            + G +++  E+  EM  +G  PN  T+  L++GLCK G   +A   FL  +R    + +
Sbjct: 327 SRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMS-FLNELRVNEFEID 385

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
              Y+ +     R   ++++  ++  M   G IP       L D   +  N + A  L+ 
Sbjct: 386 EEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEV-NRKEAQMLIT 444

Query: 416 LMSREGFSPNICT 428
           ++ + G  P  C+
Sbjct: 445 IVVKCGIKPKSCS 457



 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
           + ++  F   G+++EA  +V  MH++ +   +   NL+M      GLV+    L+ EMS+
Sbjct: 285 KVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSS 344

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
           RGV P+  +Y V++   CK G V EA  +L+ +    F +D   ++ +  E    G   +
Sbjct: 345 RGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDK 404

Query: 269 ALRYFHKFSDMGLKP 283
           +L    +    G  P
Sbjct: 405 SLEVVAEMIRDGFIP 419



 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 93/194 (47%), Gaps = 7/194 (3%)

Query: 159 GRLKEAVEMVFEMHNQGMVPNTQTLNLVMK--IACEMGLVDYAQY--LFEEMSARGVHPD 214
           G +  A E+V EM   G+V   +   +  K  I C +   D+ +   + + M    V  D
Sbjct: 224 GEITRARELVEEM---GLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLD 280

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH 274
             SY+V++  +   G V EA++ + +M D+   V++  + LI++ +   G   + +  + 
Sbjct: 281 LDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYS 340

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           + S  G+ PN   +  ++ GLCK G + +A   L E+    ++ +   ++ L +   + G
Sbjct: 341 EMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVG 400

Query: 335 WTEKAFRLFLKLVR 348
             +K+  +  +++R
Sbjct: 401 MIDKSLEVVAEMIR 414


>AT3G15200.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:5117489-5119060 REVERSE
           LENGTH=523
          Length = 523

 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 160/358 (44%), Gaps = 17/358 (4%)

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH 274
           S  Y  ++    KM    E  +    M  R   V+  ++ ++++ +        A+  F 
Sbjct: 143 SMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFE 202

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP---NVYTHTALIDGLC 331
           +  + G+  +L+ F  ++  LC+   +    E  E + C   +    ++     +++G C
Sbjct: 203 RRKEFGIDDDLVAFHGLLMWLCRYKHV----EFAETLFCSRRREFGCDIKAMNMILNGWC 258

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
             G   +A R +  ++ S+  +P+V++Y  MIN   +  KL +A  L   M +    P+ 
Sbjct: 259 VLGNVHEAKRFWKDIIASKC-RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDV 317

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
                +ID  C       A ++   +S +G  PN+ TYN+++  LCK  R ++ ++++++
Sbjct: 318 KICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEE 377

Query: 452 GFHNG--LEADKVTYNILI--SEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
               G     + VT++ L+  S+  K  DI     +  +MAK+  +     Y  +  ++ 
Sbjct: 378 MELKGGSCSPNDVTFSYLLKYSQRSKDVDI-----VLERMAKNKCEMTSDLYNLMFRLYV 432

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           +  +  +    + E  R G  P +RTYT  I G   +G +  A+ +F  M   G VP+
Sbjct: 433 QWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490



 Score = 97.1 bits (240), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/360 (22%), Positives = 160/360 (44%), Gaps = 23/360 (6%)

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
           N ++ +  +M   +    +F+EMS R    +  +Y V++  Y     V EA        +
Sbjct: 147 NEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKE 206

Query: 244 RGFLVDNASFTLII--------SEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
            G   D  +F  ++         EF E  F +R   +      M +         ++ G 
Sbjct: 207 FGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNM---------ILNGW 257

Query: 296 CKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPN 355
           C  G++ +A    ++++    +P+V ++  +I+ L KKG   KA  L+  +  +  N P+
Sbjct: 258 CVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRN-PD 316

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
           V     +I+  C   ++  A  +   + E+G  PN  TY +L+   CK    E+ ++L+ 
Sbjct: 317 VKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVE 376

Query: 416 LMSREGFS--PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
            M  +G S  PN  T++ +   L    R ++   +L+    N  E     YN++   + +
Sbjct: 377 EMELKGGSCSPNDVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQ 433

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
               ++   ++S+M +SG+ PD  +YT  I     + ++ E+  +F+E +  G +P  RT
Sbjct: 434 WDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493



 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 156/328 (47%), Gaps = 10/328 (3%)

Query: 142 QKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQ-GMVPNTQTLNLVMKIACEMGLVDYAQ 200
           +K +EV+   +  +A   ++ EAV  VFE   + G+  +    + ++   C    V++A+
Sbjct: 178 EKTYEVL---LNRYAAAHKVDEAVG-VFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAE 233

Query: 201 YLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEF 260
            LF     R    D  +  +++  +C +GNV EA ++   ++      D  S+  +I+  
Sbjct: 234 TLFCS-RRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINAL 292

Query: 261 CEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNV 320
            +KG   +A+  +    D    P++    ++I+ LC +  I +A E+  E+  +G  PNV
Sbjct: 293 TKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNV 352

Query: 321 YTHTALIDGLCKKGWTEKAFRLFLKL-VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
            T+ +L+  LCK   TEK + L  ++ ++  +  PN +T++ ++    R   ++   ++L
Sbjct: 353 VTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVD---IVL 409

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
            RM +      ++ Y  +   + +    E+  ++ + M R G  P+  TY   + GL  K
Sbjct: 410 ERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTK 469

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           G++ EA    ++    G+  +  T  +L
Sbjct: 470 GKIGEALSYFQEMMSKGMVPEPRTEMLL 497



 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 3/221 (1%)

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           N  TY  ++N Y    K++ A  +  R KE G+  +   +  L+   C+  + E A  L 
Sbjct: 177 NEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLF 236

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
               RE F  +I   N I++G C  G V EA +  KD   +    D V+Y  +I+   K+
Sbjct: 237 CSRRRE-FGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKK 295

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
             + +A+ L+  M  +   PD+     +I   C +KR+ E+   F E    G  P   TY
Sbjct: 296 GKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTY 355

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHG--CVPDSIAYGTLI 573
            S++   C+        +    M   G  C P+ + +  L+
Sbjct: 356 NSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL 396



 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 46/242 (19%)

Query: 429 YNAIVDGLCKKGRVQEAYKML-----KDGFHNGLEADKVTYNILISEHCKQADIKQALAL 483
           YN I+D L K  R +E +++      +DGF N     + TY +L++ +     + +A+ +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVN-----EKTYEVLLNRYAAAHKVDEAVGV 200

Query: 484 FSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCR 543
           F +  + GI  D+ ++  L+   CR K +  +E  F  + R  F    +    ++ G+C 
Sbjct: 201 FERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFC-SRRREFGCDIKAMNMILNGWCV 259

Query: 544 EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL--------------------------- 576
            GN+  A +F+  +    C PD ++YGT+I+ L                           
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKI 319

Query: 577 --------CKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLE 628
                   C + ++ EA  ++  + EKG  P  VT  +L    CKI        +++ +E
Sbjct: 320 CNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379

Query: 629 KK 630
            K
Sbjct: 380 LK 381


>AT3G13880.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:4572180-4574426 FORWARD
           LENGTH=748
          Length = 748

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 199/457 (43%), Gaps = 25/457 (5%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  + ++G  ++A+E+  E     +  +  T    +    E   +D  + L   +   G
Sbjct: 119 LISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNG 178

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +        V++  Y K G +   D+ +S + DR    D  S+  +IS +   G A   L
Sbjct: 179 LSQQVFLINVLIDMYSKCGKL---DQAMS-LFDRCDERDQVSWNSLISGYVRVGAAEEPL 234

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLC---KRGSIKQAFEMLEEMVCQGWKPNVYTHTALI 327
               K    GL        S+++  C     G I++   +       G + ++   TAL+
Sbjct: 235 NLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALL 294

Query: 328 DGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL-----NRAEMLLGRM 382
           D   K G  ++A +LF  L+ S+N    V+TY AMI+G+ + D++     + A  L   M
Sbjct: 295 DMYAKNGSLKEAIKLF-SLMPSKN----VVTYNAMISGFLQMDEITDEASSEAFKLFMDM 349

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           + +GL P+ +T++ ++     A   E    +  L+ +  F  +    +A+++     G  
Sbjct: 350 QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGST 409

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           ++  +     F +  + D  ++  +I  H +   ++ A  LF ++  S I+P+ ++ + +
Sbjct: 410 EDGMQC----FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGC 562
           ++       +S  E     A++ G        TS I  Y + GN+ +A + F  + +   
Sbjct: 466 MSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQN--- 522

Query: 563 VPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            PD   Y  +IS L +    +EA  +++SM   G+ P
Sbjct: 523 -PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP 558



 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 26/262 (9%)

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHC-KAGNFERAFDL 413
           N++++ ++I+GY +     +A  L    +E  L  +  TY   + G C +  + +    L
Sbjct: 112 NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGAL-GFCGERCDLDLGELL 170

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
             L+   G S  +   N ++D   K G++ +A  +    F    E D+V++N LIS + +
Sbjct: 171 HGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSL----FDRCDERDQVSWNSLISGYVR 226

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV-------RFG 526
               ++ L L +KM + G+    ++  +++   C    ++ +E F E+ +       + G
Sbjct: 227 VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACC----INLNEGFIEKGMAIHCYTAKLG 282

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL---- 582
                   T+++  Y + G+L  AIK F  M     V     Y  +ISG  +  ++    
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVV----TYNAMISGFLQMDEITDEA 338

Query: 583 -DEARGLYDSMIEKGLIPCEVT 603
             EA  L+  M  +GL P   T
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPST 360



 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/246 (18%), Positives = 99/246 (40%), Gaps = 8/246 (3%)

Query: 134 SLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM 193
           +LI   N Q    +   ++  +A +G  ++ ++       Q +   T  ++       + 
Sbjct: 382 ALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMID----CHVQN 437

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF 253
             ++ A  LF ++ +  + P+  +  +M+ A      +   ++     +  G     +  
Sbjct: 438 EQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVK 497

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
           T  IS + + G    A + F +  +    P++  +++MI  L + GS  +A  + E M  
Sbjct: 498 TSSISMYAKSGNMPLANQVFIEVQN----PDVATYSAMISSLAQHGSANEALNIFESMKT 553

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
            G KPN      ++   C  G   +  + F  +       PN   +T +++   R  +L+
Sbjct: 554 HGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLS 613

Query: 374 RAEMLL 379
            AE L+
Sbjct: 614 DAENLI 619


>AT2G27610.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:11783927-11786533 REVERSE
           LENGTH=868
          Length = 868

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 203/452 (44%), Gaps = 42/452 (9%)

Query: 124 FMRLYIVCATSLIGNGNLQKAH------EV-----MQCMVRSFAEIGRLKEAVEMVFEMH 172
            + LY+ C       GN++KA       EV        M+  +A  G   EA+ M + M 
Sbjct: 235 LINLYLKC-------GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287

Query: 173 NQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVL 232
              +  +  +   V+K+   +  + + + L   +   G   D      ++VAY K   +L
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347

Query: 233 EADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMI 292
           +A   L +  + G + +  S+T +IS F +      A+  F +    G++PN   ++ ++
Sbjct: 348 DA---LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404

Query: 293 EGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN 352
             L     +    E+  ++V   ++ +    TAL+D   K G  E+A ++F     S  +
Sbjct: 405 TAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF-----SGID 455

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFE---- 408
             +++ ++AM+ GY +  +   A  + G + + G+ PN  T++++++  C A N      
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN-VCAATNASMGQG 514

Query: 409 RAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILI 468
           + F    + SR     ++C  +A++    KKG ++ A ++    F    E D V++N +I
Sbjct: 515 KQFHGFAIKSR--LDSSLCVSSALLTMYAKKGNIESAEEV----FKRQREKDLVSWNSMI 568

Query: 469 SEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFI 528
           S + +     +AL +F +M K  ++ D  ++  + A       + E E +F+  VR   I
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628

Query: 529 -PTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
            PTK   + M+  Y R G L  A+K    M +
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 660



 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/469 (22%), Positives = 195/469 (41%), Gaps = 29/469 (6%)

Query: 241 MLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIE---GLCK 297
           + D+    D  S+  ++  F   G    A R F     +G++ +   F+S+++    LC 
Sbjct: 49  LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108

Query: 298 RGSIKQAFEMLEEMVCQ----GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
               +Q       + CQ    G+  +V   T+L+D   K    +   ++F      E  +
Sbjct: 109 ELFGRQ-------LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF-----DEMKE 156

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
            NV+T+T +I+GY R+   +    L  RM+ +G  PN+ T+   +    + G   R   +
Sbjct: 157 RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV 216

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
             ++ + G    I   N++++   K G V++A  +    F        VT+N +IS +  
Sbjct: 217 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL----FDKTEVKSVVTWNSMISGYAA 272

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
                +AL +F  M  + ++    S+ ++I +    K +  +E      V++GF+  +  
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332

Query: 534 YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
            T+++  Y +   +  A++ F  +   GCV + +++  +ISG  +    +EA  L+  M 
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389

Query: 594 EKGLIPCEVTRITLAYEYCKIDDC-CSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMA 652
            KG+ P E T   +      I      A V+    E+   + TA  L+       KV  A
Sbjct: 390 RKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTA--LLDAYVKLGKVEEA 447

Query: 653 ALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSARIYKDNRLT 701
           A  F  + D D       LA +           +  +L+    K N  T
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFT 496



 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/447 (20%), Positives = 201/447 (44%), Gaps = 29/447 (6%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  +A      E + +   M N+G  PN+ T    + +  E G+      +   +   G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +         ++  Y K GNV +A     ++ D+  +    ++  +IS +   G    AL
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKA----RILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ----GWKPNVYTHTAL 326
             F+      ++ +  +F S+I+ LC   ++K+     E++ C     G+  +    TAL
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIK-LC--ANLKE-LRFTEQLHCSVVKYGFLFDQNIRTAL 336

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           +    K      A RLF ++        NV+++TAMI+G+ ++D    A  L   MK +G
Sbjct: 337 MVAYSKCTAMLDALRLFKEI----GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           + PN  TY+ ++         E    ++    +  +  +     A++D   K G+V+EA 
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVV----KTNYERSSTVGTALLDAYVKLGKVEEAA 448

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAV- 505
           K+    F    + D V ++ +++ + +  + + A+ +F ++ K GI+P+  ++++++ V 
Sbjct: 449 KV----FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504

Query: 506 FCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
                 M + + F   A++     +    ++++  Y ++GN+  A + F R  +     D
Sbjct: 505 AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK----D 560

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSM 592
            +++ ++ISG  +  +  +A  ++  M
Sbjct: 561 LVSWNSMISGYAQHGQAMKALDVFKEM 587



 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/470 (18%), Positives = 184/470 (39%), Gaps = 60/470 (12%)

Query: 155 FAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
           F+  GR +EA  +   +H  GM  +    + V+K++  +    + + L  +    G   D
Sbjct: 68  FSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDD 127

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH 274
            +    +V  Y K  N  +  K    M +R  +    ++T +IS +         L  F 
Sbjct: 128 VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV----TWTTLISGYARNSMNDEVLTLFM 183

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           +  + G +PN   F + +  L + G   +  ++   +V  G    +    +LI+   K G
Sbjct: 184 RMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCG 243

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDD------------KLNRAEM----- 377
              KA  LF K         +V+T+ +MI+GY  +             +LN   +     
Sbjct: 244 NVRKARILFDK-----TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSF 298

Query: 378 -----LLGRMKE-------------QGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
                L   +KE              G + + N  T L+  + K        D + L   
Sbjct: 299 ASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM---LDALRLFKE 355

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
            G   N+ ++ A++ G  +    +EA  +  +    G+  ++ TY+++++       +  
Sbjct: 356 IGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT----ALPVIS 411

Query: 480 ALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR--TYTSM 537
              + +++ K+  +      T L+  + +  ++ E+      A  F  I  K    +++M
Sbjct: 412 PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA------AKVFSGIDDKDIVAWSAM 465

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
           + GY + G    AIK F  ++  G  P+   + ++++ +C  +     +G
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN-VCAATNASMGQG 514


>AT2G03380.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:1028292-1030361 FORWARD
           LENGTH=689
          Length = 689

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/482 (21%), Positives = 207/482 (42%), Gaps = 51/482 (10%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTL-NLVMKIACEMGLVDYAQYLFEE 205
           V+  ++  +A+ G +K A ++  ++  + +V  T  +   V    CE GLV     LF  
Sbjct: 178 VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV-----LFNR 232

Query: 206 MSARGVHPDSASYRVMVVAYCKMGNVLEADKWL-SVMLDRGFLVDNASFTLIISEFCEKG 264
           M    V  +  +Y  +++A  K+ + L   KW    ++  G  + +   T ++  + + G
Sbjct: 233 MRENNVLGNEYTYGTLIMACTKL-SALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCG 291

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHT 324
             + A R F++ S +    +L+ +T+MI G    GS+ +A  + ++M     KPN  T  
Sbjct: 292 DISNARRVFNEHSHV----DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIA 347

Query: 325 ALIDGL----------------CKKG-WTEKAFRLFL------------KLVRSENNKPN 355
           +++ G                  K G W        +            K V    ++ +
Sbjct: 348 SVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKD 407

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
           ++ + ++I+G+ ++  ++ A  L  RM  + + PN  T  +L       G+      L  
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHA 467

Query: 416 LMSREGF--SPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
              + GF  S ++    A++D   K G  Q A +++ D      E + +T++ +I  + K
Sbjct: 468 YSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIE---EKNTITWSAMIGGYGK 523

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR-FGFIPTKR 532
           Q D   +L LF +M K   +P+  ++T++++       ++E + +F    + + F P+ +
Sbjct: 524 QGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTK 583

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
            YT M+    R G L  A+    +M      PD   +G  + G    S+ D    +   M
Sbjct: 584 HYTCMVDMLARAGELEQALDIIEKMPIQ---PDVRCFGAFLHGCGMHSRFDLGEIVIKKM 640

Query: 593 IE 594
           ++
Sbjct: 641 LD 642



 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 109/563 (19%), Positives = 212/563 (37%), Gaps = 103/563 (18%)

Query: 183 LNLVMKIACEMGLVDY---AQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLS 239
           +++  K+    G   Y   A+ +F+++      PD   ++VM+  YC     +E  K   
Sbjct: 76  ISIATKLVSLYGFFGYTKDARLVFDQIP----EPDFYLWKVMLRCYCLNKESVEVVKLYD 131

Query: 240 VMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRG 299
           +++  GF  D+  F+             +AL+   +  D+                    
Sbjct: 132 LLMKHGFRYDDIVFS-------------KALKACTELQDL-------------------- 158

Query: 300 SIKQAFEMLEEMVCQGWKPNVYTH---TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNV 356
                 +  +++ CQ  K   + +   T L+D   K G  + A ++F  +        NV
Sbjct: 159 ------DNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR-----NV 207

Query: 357 LTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNL 416
           + +T+MI GY ++D      +L  RM+E  ++ N  TY TLI    K     +       
Sbjct: 208 VCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGC 267

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           + + G   + C   +++D   K G +  A ++  +  H     D V +  +I  +     
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH----VDLVMWTAMIVGYTHNGS 323

Query: 477 IKQALALFSKMAKSGIQPD----------------------IHSYTTLIAVF-------- 506
           + +AL+LF KM    I+P+                      +H  +  + ++        
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANAL 383

Query: 507 ------CREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
                 C + R  +++  FE       +     + S+I G+ + G++  A+  FHRM+  
Sbjct: 384 VHMYAKCYQNR--DAKYVFEMESEKDIV----AWNSIISGFSQNGSIHEALFLFHRMNSE 437

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYE--YCKIDDCC 618
              P+ +   +L S       L     L+   ++ G +      +  A    Y K  D  
Sbjct: 438 SVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQ 497

Query: 619 SAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTAC 678
           SA +I D +E+K  I T + ++     +     +   F ++L      N  T  + ++AC
Sbjct: 498 SARLIFDTIEEKNTI-TWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSAC 556

Query: 679 YESNKYALVSDLSARIYKDNRLT 701
             +          + +YKD   T
Sbjct: 557 GHTGMVNEGKKYFSSMYKDYNFT 579



 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 133/304 (43%), Gaps = 20/304 (6%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   +V  +A+  + ++A + VFEM ++    +    N ++    + G +  A +LF  M
Sbjct: 379 VANALVHMYAKCYQNRDA-KYVFEMESE---KDIVAWNSIISGFSQNGSIHEALFLFHRM 434

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF--TLIISEFCEKG 264
           ++  V P+  +   +  A   +G++       +  +  GFL  ++    T ++  + + G
Sbjct: 435 NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHT 324
               A   F    +     N I +++MI G  K+G    + E+ EEM+ +  KPN  T T
Sbjct: 495 DPQSARLIFDTIEE----KNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFT 550

Query: 325 ALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKE 384
           +++      G   +  + F  + +  N  P+   YT M++   R  +L +A  ++ +M  
Sbjct: 551 SILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPI 610

Query: 385 QGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE--GFSPNICTYNAIVDGL-CKKGR 441
           Q   P+   +   + G    G   R FDL  ++ ++     P+  +Y  +V  L    GR
Sbjct: 611 Q---PDVRCFGAFLHG---CGMHSR-FDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGR 663

Query: 442 VQEA 445
             +A
Sbjct: 664 WNQA 667



 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/272 (19%), Positives = 117/272 (43%), Gaps = 41/272 (15%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMG---------------- 194
           ++  F++ G + EA+ +   M+++ + PN  T+  +      +G                
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG 473

Query: 195 ------------LVDYAQYLFEEMSARGV-----HPDSASYRVMVVAYCKMGNVLEADKW 237
                       L+D+     +  SAR +       ++ ++  M+  Y K G+ + + + 
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLEL 533

Query: 238 LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHK-FSDMGLKPNLINFTSMIEGLC 296
              ML +    + ++FT I+S     G      +YF   + D    P+  ++T M++ L 
Sbjct: 534 FEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLA 593

Query: 297 KRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNV 356
           + G ++QA +++E+M  Q   P+V    A + G       +    +  K++   +  P+ 
Sbjct: 594 RAGELEQALDIIEKMPIQ---PDVRCFGAFLHGCGMHSRFDLGEIVIKKML---DLHPDD 647

Query: 357 LTYTAMI-NGYCRDDKLNRAEMLLGRMKEQGL 387
            +Y  ++ N Y  D + N+A+ +   MK++GL
Sbjct: 648 ASYYVLVSNLYASDGRWNQAKEVRNLMKQRGL 679


>AT1G32415.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr1:11695611-11697896 FORWARD LENGTH=761
          Length = 761

 Score =  104 bits (259), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/455 (22%), Positives = 197/455 (43%), Gaps = 70/455 (15%)

Query: 185 LVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDR 244
           L+++   E GLV +A++L +++  RG       +  ++  Y K G + EA     VM +R
Sbjct: 48  LILRRLSEGGLV-HARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 106

Query: 245 GFLVDNA--------------------------SFTLIISEFCEKGFATRALRYFHKFSD 278
             +  NA                          S+T++++  C+ G +  A+  F +  +
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE 166

Query: 279 MGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK 338
                N++++ +++ GL + G +++A ++ + M  +    +V +  A+I G  +    E+
Sbjct: 167 R----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEE 218

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A     KL+  + ++ NV+T+T+M+ GYCR   +  A  L   M E+ ++    ++T +I
Sbjct: 219 A-----KLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV----SWTAMI 269

Query: 399 DGHCKAGNFERAFDLMNLMSR--EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH-- 454
            G      +  A  L   M +  +  SPN  T  ++       G +   ++ L +  H  
Sbjct: 270 SGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC---GGLGVEFRRLGEQLHAQ 326

Query: 455 ---NGLEA---DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
              NG E    D      L+  +     I  A +L ++        D+ S   +I  + +
Sbjct: 327 VISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE------SFDLQSCNIIINRYLK 380

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
              +  +E  FE   R   +  K ++TSMI GY   G+++ A   F ++ D     D + 
Sbjct: 381 NGDLERAETLFE---RVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVT 433

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
           +  +ISGL +     EA  L   M+  GL P   T
Sbjct: 434 WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNST 468



 Score = 99.4 bits (246), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 198/469 (42%), Gaps = 69/469 (14%)

Query: 133 TSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACE 192
           T LI NG+++KA +V   M                           +  + N ++K   E
Sbjct: 177 TGLIRNGDMEKAKQVFDAMPSR------------------------DVVSWNAMIKGYIE 212

Query: 193 MGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNAS 252
              ++ A+ LF +MS + V     ++  MV  YC+ G+V EA +    M +R  +    S
Sbjct: 213 NDGMEEAKLLFGDMSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEMPERNIV----S 264

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDM--GLKPNLINFTSMIEGLCKRGSIKQAFEMLEE 310
           +T +IS F        AL  F +       + PN     S+       G +   F  L E
Sbjct: 265 WTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC---GGLGVEFRRLGE 321

Query: 311 -----MVCQGWKP---NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM 362
                ++  GW+    +     +L+      G    A  L        N   ++ +   +
Sbjct: 322 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLL-------NESFDLQSCNII 374

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN-LMSREG 421
           IN Y ++  L RAE L  R+K    + +  ++T++IDG+ +AG+  RAF L   L  ++G
Sbjct: 375 INRYLKNGDLERAETLFERVKS---LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDG 431

Query: 422 FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQAL 481
                 T+  ++ GL +     EA  +L D    GL+    TY++L+S     +++ Q  
Sbjct: 432 V-----TWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486

Query: 482 ALFSKMAKSGI--QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMIC 539
            +   +AK+     PD+    +L++++ +   + ++   F + V+   +    ++ SMI 
Sbjct: 487 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV----SWNSMIM 542

Query: 540 GYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGL 588
           G    G    A+  F  M D G  P+S+ +  ++S  C  S L   RGL
Sbjct: 543 GLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA-CSHSGLI-TRGL 589



 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/468 (22%), Positives = 194/468 (41%), Gaps = 62/468 (13%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
             M+  + +  R+ EA  +  EM       N  +  +++   C+ G  + A  LF+EM  
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMPE 166

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
           R V     S+  +V    + G++ +A +    M  R    D  S+  +I  + E      
Sbjct: 167 RNV----VSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEE 218

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A   F   S+     N++ +TSM+ G C+ G +++A+ +  EM     + N+ + TA+I 
Sbjct: 219 AKLLFGDMSE----KNVVTWTSMVYGYCRYGDVREAYRLFCEMP----ERNIVSWTAMIS 270

Query: 329 GLCKKGWTEKAFRLFLKLVRSENN-KPN--VLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           G        +A  LFL++ +  +   PN   L   A   G    +     E L  ++   
Sbjct: 271 GFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISN 330

Query: 386 G---LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
           G   +  +     +L+  +  +G    A  L+N    E F    C  N I++   K G +
Sbjct: 331 GWETVDHDGRLAKSLVHMYASSGLIASAQSLLN----ESFDLQSC--NIIINRYLKNGDL 384

Query: 443 QEAYKMLK--DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM-AKSGIQPDIHSY 499
           + A  + +     H     DKV++  +I  + +  D+ +A  LF K+  K G+     ++
Sbjct: 385 ERAETLFERVKSLH-----DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV-----TW 434

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD 559
           T +I+   + +  +E+     + VR G  P   TY+ ++       NL    K  H    
Sbjct: 435 TVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG-KHIH---- 489

Query: 560 HGCV---------PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI 598
             CV         PD I   +L+S   K   +++A  ++  M++K  +
Sbjct: 490 --CVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV 535



 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/276 (20%), Positives = 116/276 (42%), Gaps = 27/276 (9%)

Query: 138 NGNLQKAHEVMQ------------CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNL 185
           NG+L++A  + +             M+  + E G +  A  +  ++H++  V    T  +
Sbjct: 381 NGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV----TWTV 436

Query: 186 VMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRG 245
           ++    +  L   A  L  +M   G+ P +++Y V++ +     N L+  K +  ++ + 
Sbjct: 437 MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN-LDQGKHIHCVIAKT 495

Query: 246 FLVDNASFTL---IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIK 302
               +    L   ++S + + G    A   F K     ++ + +++ SMI GL   G   
Sbjct: 496 TACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLAD 551

Query: 303 QAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM 362
           +A  + +EM+  G KPN  T   ++      G   +   LF  +  + + +P +  Y +M
Sbjct: 552 KALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISM 611

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           I+   R  KL  AE  +  +      P+   Y  L+
Sbjct: 612 IDLLGRAGKLKEAEEFISALP---FTPDHTVYGALL 644


>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:22561941-22564433 REVERSE
           LENGTH=830
          Length = 830

 Score =  104 bits (259), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/459 (20%), Positives = 197/459 (42%), Gaps = 23/459 (5%)

Query: 225 YCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPN 284
           Y K G + +A K    + DR  +  NA    ++  + + G    A+R F      G++P 
Sbjct: 218 YGKCGVLDDASKVFDEIPDRNAVAWNA----LMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273

Query: 285 LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 344
            +  ++ +      G +++  +     +  G + +    T+L++  CK G  E A  +F 
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD 333

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
           ++      + +V+T+  +I+GY +   +  A  +   M+ + L  +  T  TL+    + 
Sbjct: 334 RMF-----EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAART 388

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
            N +   ++     R  F  +I   + ++D   K G + +A K+    F + +E D + +
Sbjct: 389 ENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKV----FDSTVEKDLILW 444

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           N L++ + +     +AL LF  M   G+ P++ ++  +I    R  ++ E++  F +   
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
            G IP   ++T+M+ G  + G    AI F  +M + G  P++ +    +S     + L  
Sbjct: 505 SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHI 564

Query: 585 ARGLYDSMIEK----GLIPCEVTRITLAYEYCKIDDCCSA-MVILDRLEKKLWIRTATTL 639
            R ++  +I       L+  E + + +   Y K  D   A  V   +L  +L +  A   
Sbjct: 565 GRTIHGYIIRNLQHSSLVSIETSLVDM---YAKCGDINKAEKVFGSKLYSELPLSNAMIS 621

Query: 640 VRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTAC 678
              L    K  +A   +  L  +    + +T+   ++AC
Sbjct: 622 AYALYGNLKEAIA--LYRSLEGVGLKPDNITITNVLSAC 658



 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 116/584 (19%), Positives = 236/584 (40%), Gaps = 61/584 (10%)

Query: 115 AIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQ 174
           A+ +SRF   +  Y+V          L+    V   +   + + G L +A ++  E+ ++
Sbjct: 185 ALKWSRFGRGVHGYVV-------KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR 237

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
               N    N +M    + G  + A  LF +M  +GV P   +    + A   MG V E 
Sbjct: 238 ----NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
            +  ++ +  G  +DN   T +++ +C+ G     + Y     D   + +++ +  +I G
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGL----IEYAEMVFDRMFEKDVVTWNLIISG 349

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
             ++G ++ A  M + M  +  K +  T   L+    +    +    +    +R      
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
            VL  T M + Y +   +  A+ +     E+ LI     + TL+  + ++G    A  L 
Sbjct: 410 IVLASTVM-DMYAKCGSIVDAKKVFDSTVEKDLI----LWNTLLAAYAESGLSGEALRLF 464

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
             M  EG  PN+ T+N I+  L + G+V EA  M      +G+  + +++  +++   + 
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQN 524

Query: 475 ADIKQALALFSKMAKSGIQPD----------------------IHSY------------- 499
              ++A+    KM +SG++P+                      IH Y             
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584

Query: 500 -TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS 558
            T+L+ ++ +   ++++E  F   + +  +P      +MI  Y   GNL  AI  +  + 
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKL-YSELPLS---NAMISAYALYGNLKEAIALYRSLE 640

Query: 559 DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK-GLIPCEVTRITLAYEYCKIDDC 617
             G  PD+I    ++S       +++A  ++  ++ K  + PC      +        + 
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGET 700

Query: 618 CSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLD 661
             A+ +++ +  K   R   +LV     +RK  +      KLL+
Sbjct: 701 EKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLE 744



 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 56/343 (16%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEM--------------VCQG------------- 315
           P+  ++   +  LCK G IK+A  ++ EM              + QG             
Sbjct: 33  PSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI 92

Query: 316 ----------WKPNVYTHTALIDGLCKKGWTEKAFRLFLKL-VRSENNKPNVLTYTAMIN 364
                     +  N Y  T L+    K    E A  LF KL VR      NV ++ A+I 
Sbjct: 93  HARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVR------NVFSWAAIIG 146

Query: 365 GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID--GHCKAGNFERAFDLMNLMSREGF 422
             CR      A M    M E  + P+      +    G  K   F R   +   + + G 
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRG--VHGYVVKSGL 204

Query: 423 SPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALA 482
              +   +++ D   K G + +A K+    F    + + V +N L+  + +    ++A+ 
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKV----FDEIPDRNAVAWNALMVGYVQNGKNEEAIR 260

Query: 483 LFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYC 542
           LFS M K G++P   + +T ++       + E +     A+  G        TS++  YC
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC 320

Query: 543 REGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
           + G +  A   F RM +     D + +  +ISG  +Q  +++A
Sbjct: 321 KVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDA 359


>AT2G33680.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:14249608-14251791 FORWARD
           LENGTH=727
          Length = 727

 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/495 (22%), Positives = 217/495 (43%), Gaps = 53/495 (10%)

Query: 139 GNLQKAHEVMQC-----------MVRSFAEIGRLKEA---VEMVFEMHNQGMVPNTQTLN 184
           G L KAH +              ++  +++ G +  +   +++  EM  Q ++PN  TL 
Sbjct: 63  GKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLA 122

Query: 185 LVMKIACEM---GLVDYAQYLFEEMSARG-VHPDSASYRVMVVAYCKMGNVLEADKWLSV 240
            + K    +    +   A  L  +MS+ G ++ D++    +V  YCK G V +  K  + 
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTS----LVGMYCKAGLVEDGLKVFAY 178

Query: 241 MLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKF---SDMGLKPNLINFTSMIEGLCK 297
           M +R    +  +++ ++S +  +G    A++ F+ F    + G   + + FT+++  L  
Sbjct: 179 MPER----NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAA 233

Query: 298 RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
              +    ++    +  G    V    AL+    K     +A ++F       +   N +
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMF-----DSSGDRNSI 288

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           T++AM+ GY ++ +   A  L  RM   G+ P+  T   +++        E    L + +
Sbjct: 289 TWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL 348

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
            + GF  ++    A+VD   K G + +A K    GF    E D   +  LIS + + +D 
Sbjct: 349 LKLGFERHLFATTALVDMYAKAGCLADARK----GFDCLQERDVALWTSLISGYVQNSDN 404

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF---IPTKRTY 534
           ++AL L+ +M  +GI P+  +  +++        +   +      ++ GF   +P     
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSAL 464

Query: 535 TSMI--CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           ++M   CG   +GNL      F R  +     D +++  +ISGL    + DEA  L++ M
Sbjct: 465 STMYSKCGSLEDGNLV-----FRRTPN----KDVVSWNAMISGLSHNGQGDEALELFEEM 515

Query: 593 IEKGLIPCEVTRITL 607
           + +G+ P +VT + +
Sbjct: 516 LAEGMEPDDVTFVNI 530



 Score = 86.7 bits (213), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/338 (21%), Positives = 151/338 (44%), Gaps = 49/338 (14%)

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           +V  Y K  ++ EA K      DR    ++ +++ +++ + + G +  A++ F +    G
Sbjct: 262 LVTMYSKCESLNEACKMFDSSGDR----NSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAF 340
           +KP+      ++        +++  ++   ++  G++ +++  TAL+D   K G    A 
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377

Query: 341 RLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL--- 397
           + F  L      + +V  +T++I+GY ++     A +L  RMK  G+IPN  T  ++   
Sbjct: 378 KGFDCL-----QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 432

Query: 398 ------------IDGH--------------------CKAGNFERAFDLMNLMSREGFSPN 425
                       + GH                     K G+ E      NL+ R   + +
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG----NLVFRRTPNKD 488

Query: 426 ICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFS 485
           + ++NA++ GL   G+  EA ++ ++    G+E D VT+  +IS    +  +++    F+
Sbjct: 489 VVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFN 548

Query: 486 KMAKS-GIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
            M+   G+ P +  Y  ++ +  R  ++ E++ F E A
Sbjct: 549 MMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESA 586



 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 90/443 (20%), Positives = 172/443 (38%), Gaps = 50/443 (11%)

Query: 191 CEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVML---DRGFL 247
           C+ GLV+    +F  M  R  +    ++  MV  Y   G V EA K  ++ L   + G  
Sbjct: 164 CKAGLVEDGLKVFAYMPERNTY----TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD 219

Query: 248 VDNASFTLIISEFCEK-------------------GFAT------------RALRYFHKF 276
            D   FT ++S                        GF               +L    K 
Sbjct: 220 SDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKM 278

Query: 277 SDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWT 336
            D     N I +++M+ G  + G   +A ++   M   G KP+ YT   +++      + 
Sbjct: 279 FDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYL 338

Query: 337 EKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT 396
           E+  +L   L++    + ++   TA+++ Y +   L  A      ++E+    +   +T+
Sbjct: 339 EEGKQLHSFLLKLGFER-HLFATTALVDMYAKAGCLADARKGFDCLQER----DVALWTS 393

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
           LI G+ +  + E A  L   M   G  PN  T  +++        ++   ++      +G
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHG 453

Query: 457 LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE 516
              +    + L + + K   ++    +F +        D+ S+  +I+      +  E+ 
Sbjct: 454 FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP----NKDVVSWNAMISGLSHNGQGDEAL 509

Query: 517 MFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH-GCVPDSIAYGTLISG 575
             FEE +  G  P   T+ ++I     +G +     +F+ MSD  G  P    Y  ++  
Sbjct: 510 ELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDL 569

Query: 576 LCKQSKLDEARGLYDSM-IEKGL 597
           L +  +L EA+   +S  I+ GL
Sbjct: 570 LSRAGQLKEAKEFIESANIDHGL 592


>AT4G02750.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:1221116-1223461 REVERSE
           LENGTH=781
          Length = 781

 Score =  103 bits (257), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 106/511 (20%), Positives = 213/511 (41%), Gaps = 100/511 (19%)

Query: 152 VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGV 211
           + S+   GR  EA+ +   M     V    + N ++      G  + A+ LF+EM  R  
Sbjct: 71  ISSYMRTGRCNEALRVFKRMPRWSSV----SYNGMISGYLRNGEFELARKLFDEMPER-- 124

Query: 212 HPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALR 271
             D  S+ VM+  Y +  N+ +A +   +M +R    D  S+  ++S + + G    A  
Sbjct: 125 --DLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARS 178

Query: 272 YFHKFSD-----------------------MGLKPN----LINFTSMIEGLCKRGSIKQA 304
            F +  +                       M  K      L+++  ++ G  K+  I +A
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238

Query: 305 FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN 364
            +  + M  +    +V +   +I G  + G  ++A +LF      E+   +V T+TAM++
Sbjct: 239 RQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLF-----DESPVQDVFTWTAMVS 289

Query: 365 GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP 424
           GY ++  +  A  L  +M E+    N  ++  ++ G+ +    E A +L ++M       
Sbjct: 290 GYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMP----CR 341

Query: 425 NICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALF 484
           N+ T+N ++ G  + G++ EA    K+ F    + D V++  +I+ + +     +AL LF
Sbjct: 342 NVSTWNTMITGYAQCGKISEA----KNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLF 397

Query: 485 SKMAKSGIQPDIHSYTT-----------------------------------LIAVFCRE 509
            +M + G + +  S+++                                   L+ ++C+ 
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
             + E+   F+E      +    ++ +MI GY R G   +A++FF  M   G  PD    
Sbjct: 458 GSIEEANDLFKEMAGKDIV----SWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEK-GLIP 599
             ++S       +D+ R  + +M +  G++P
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544



 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/449 (22%), Positives = 198/449 (44%), Gaps = 73/449 (16%)

Query: 182 TLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA------- 234
           + N ++    + G VD A+ +F+ M  +    +  S+  ++ AY +   + EA       
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSR 214

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
           + W  V           S+  ++  F +K     A ++F     M ++ +++++ ++I G
Sbjct: 215 ENWALV-----------SWNCLLGGFVKKKKIVEARQFF---DSMNVR-DVVSWNTIITG 259

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV------- 347
             + G I +A ++ +E   Q    +V+T TA++ G  +    E+A  LF K+        
Sbjct: 260 YAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSW 315

Query: 348 -----------RSENNKP--------NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
                      R E  K         NV T+  MI GY +  K++ A+ L  +M ++  +
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIV----DGLCKKGRVQE 444
               ++  +I G+ ++G+   A  L   M REG   N  ++++ +    D +  +   Q 
Sbjct: 376 ----SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
             +++K G+  G        N L+  +CK   I++A  LF +MA      DI S+ T+IA
Sbjct: 432 HGRLVKGGYETGC----FVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIA 483

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS-DHGCV 563
            + R      +  FFE   R G  P   T  +++      G +    ++F+ M+ D+G +
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           P+S  Y  ++  L +   L++A  L  +M
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNM 572



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 124/273 (45%), Gaps = 15/273 (5%)

Query: 163 EAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMV 222
           E +EM  E+ +     N  T N ++    + G +  A+ LF++M  R    D  S+  M+
Sbjct: 326 ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMI 381

Query: 223 VAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH-KFSDMGL 281
             Y + G+  EA +    M   G  ++ +SF+  +S  C    A    +  H +    G 
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST-CADVVALELGKQLHGRLVKGGY 440

Query: 282 KPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFR 341
           +       +++   CK GSI++A ++ +EM  +    ++ +   +I G  + G+ E A R
Sbjct: 441 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALR 496

Query: 342 LFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM-KEQGLIPNTNTYTTLIDG 400
            F  + R E  KP+  T  A+++       +++       M ++ G++PN+  Y  ++D 
Sbjct: 497 FFESMKR-EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 555

Query: 401 HCKAGNFERAFDLMNLMSREGFSPNICTYNAIV 433
             +AG  E A +LM  M    F P+   +  ++
Sbjct: 556 LGRAGLLEDAHNLMKNMP---FEPDAAIWGTLL 585



 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 15/162 (9%)

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAK-SGIQPDIHSYTTLIAVFCREKRMSESE 516
           ++D   +N+ IS + +     +AL +F +M + S +     SY  +I+ + R      + 
Sbjct: 61  DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV-----SYNGMISGYLRNGEFELAR 115

Query: 517 MFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGL 576
             F+E      +    ++  MI GY R  NL  A + F  M +     D  ++ T++SG 
Sbjct: 116 KLFDEMPERDLV----SWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGY 167

Query: 577 CKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCC 618
            +   +D+AR ++D M EK  +      ++   +  K+++ C
Sbjct: 168 AQNGCVDDARSVFDRMPEKNDVSWNAL-LSAYVQNSKMEEAC 208


>AT5G60960.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:24528423-24529988 REVERSE
           LENGTH=521
          Length = 521

 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 10/285 (3%)

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
           T  + ID L + G  ++    F K+      K +  + T ++   C     + AE ++  
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN 236

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
              + + P+ N    LI G C A   + A  L   MSR GF      YN ++D +CK  R
Sbjct: 237 TANE-IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCR 295

Query: 442 VQEAYKM-------LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP 494
            ++ +K+       L +    G+  +  T+N+LI+  CK    ++A+ LF +M + G QP
Sbjct: 296 KKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQP 355

Query: 495 DIHSYTTLIAVFCREKRMSESEMFFE--EAVRFGFIPTKRTYTSMICGYCREGNLTMAIK 552
           D  +Y  LI    +  R+ E +   +  ++  +G +  K+ Y   +   C    L  A+ 
Sbjct: 356 DAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMS 415

Query: 553 FFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
            F  M  +GC P    Y  L+  +C  ++L  A GLY    +KG+
Sbjct: 416 VFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460



 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 94/453 (20%), Positives = 171/453 (37%), Gaps = 69/453 (15%)

Query: 63  DSFHQHTHMRVSPPRLHLSIDPDSLTHEQAVTTVASLAGNAGSMVALSFFHWAIGYSRFR 122
           D+  Q    R +    H++ +PD       +    +L+  AG   AL F  W    S F 
Sbjct: 88  DAESQTISQRFNLSFSHITPNPD------LILQTLNLSPEAGR-AALGFNEWLDSNSNFS 140

Query: 123 H-----------FMR-------LYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEA 164
           H           F R       L I+     I  G      + ++  +      GR K+ 
Sbjct: 141 HTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGG------KTLESAIDRLVRAGRPKQV 194

Query: 165 VEMVFEMHNQ-GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVV 223
            +   +M N  G+  + ++L LV+K  CE G    A+ + +  +A  + PD     +++ 
Sbjct: 195 TDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN-TANEIFPDENICDLLIS 253

Query: 224 AYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKP 283
            +C    + EA +    M   GF +   ++ +++   C         +   K     L+P
Sbjct: 254 GWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVC---------KLCRKKDPFKLQP 304

Query: 284 NLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLF 343
                              +  ++L EM  +G   N  T   LI+ LCK   TE+A  LF
Sbjct: 305 -------------------EVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLF 345

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL--IPNTNTYTTLIDGH 401
            ++      +P+  TY  +I    +  ++   + ++ +MK  G   + N   Y   +   
Sbjct: 346 GRMGEW-GCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKIL 404

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADK 461
           C     E A  +   M   G  P I TY+ ++  +C   ++  A  + K+    G+    
Sbjct: 405 CGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSP 464

Query: 462 VTYNI---LISEHCKQAD--IKQALALFSKMAK 489
             Y +    + +  K+ D  +K+   L  K A+
Sbjct: 465 KEYRVDPRFMKKKTKEVDSNVKKRETLPEKTAR 497


>AT1G55890.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:20901364-20902560 FORWARD
           LENGTH=398
          Length = 398

 Score =  102 bits (255), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 124/255 (48%), Gaps = 2/255 (0%)

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ-GLIPN 390
           K G  E A ++F ++  + + K +VL++ A+++ Y    K +  E L   +  +  + P+
Sbjct: 121 KAGMFENAQKVFEEMP-NRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPD 179

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             +Y TLI   C+  +   A  L++ +  +G  P+I T+N ++     KG+ +   ++  
Sbjct: 180 IVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWA 239

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                 +  D  TYN  +     +A  K+ + LF ++  SG++PD+ S+  +I     E 
Sbjct: 240 KMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEG 299

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
           +M E+E +++E V+ G+ P K T+  ++   C+ G+   AI+ F        +       
Sbjct: 300 KMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQ 359

Query: 571 TLISGLCKQSKLDEA 585
            L+  L K SK +EA
Sbjct: 360 QLVDELVKGSKREEA 374



 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 130/267 (48%), Gaps = 4/267 (1%)

Query: 186 VMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAY--CKMGNVLEADKWLSVMLD 243
           ++ +  + G+ + AQ +FEEM  R       S+  ++ AY   K  +V+E + +  +   
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVE-ELFNELPGK 173

Query: 244 RGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQ 303
                D  S+  +I   CEK     A+    +  + GLKP+++ F +++     +G  + 
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL 233

Query: 304 AFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMI 363
             E+  +MV +    ++ T+ A + GL  +  +++   LF +L ++   KP+V ++ AMI
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL-KASGLKPDVFSFNAMI 292

Query: 364 NGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS 423
            G   + K++ AE     + + G  P+  T+  L+   CKAG+FE A +L      + + 
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352

Query: 424 PNICTYNAIVDGLCKKGRVQEAYKMLK 450
               T   +VD L K  + +EA +++K
Sbjct: 353 VGQTTLQQLVDELVKGSKREEAEEIVK 379



 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 142/334 (42%), Gaps = 14/334 (4%)

Query: 312 VCQGWKPNVYTHTALIDG-LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDD 370
           V     P   + T+L++G    K   EK    F K   SE  + N+  Y   +       
Sbjct: 33  VTAAISPPQKSLTSLVNGERNPKRIVEK----FKKACESERFRTNIAVYDRTVRRLVAAK 88

Query: 371 KLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN 430
           +L+  E +L   K+   +        +I  + KAG FE A  +   M       ++ ++N
Sbjct: 89  RLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFN 148

Query: 431 AIVDGLCKKGRVQEAYKMLKDGFHN-----GLEADKVTYNILISEHCKQADIKQALALFS 485
           A++       R+ + + ++++ F+       ++ D V+YN LI   C++  + +A+AL  
Sbjct: 149 ALLSAY----RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLD 204

Query: 486 KMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREG 545
           ++   G++PDI ++ TL+     + +    E  + + V        RTY + + G   E 
Sbjct: 205 EIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEA 264

Query: 546 NLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRI 605
                +  F  +   G  PD  ++  +I G   + K+DEA   Y  +++ G  P + T  
Sbjct: 265 KSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFA 324

Query: 606 TLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTL 639
            L    CK  D  SA+ +      K ++   TTL
Sbjct: 325 LLLPAMCKAGDFESAIELFKETFSKRYLVGQTTL 358



 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 91/189 (48%), Gaps = 5/189 (2%)

Query: 160 RLKEAVEMVFEMHNQ-----GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
           RL +  ++V E+ N+      + P+  + N ++K  CE   +  A  L +E+  +G+ PD
Sbjct: 155 RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPD 214

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH 274
             ++  ++++    G     ++  + M+++   +D  ++   +     +  +   +  F 
Sbjct: 215 IVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFG 274

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           +    GLKP++ +F +MI G    G + +A    +E+V  G++P+  T   L+  +CK G
Sbjct: 275 ELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334

Query: 335 WTEKAFRLF 343
             E A  LF
Sbjct: 335 DFESAIELF 343



 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 80/190 (42%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
            ++++  E   L EAV ++ E+ N+G+ P+  T N ++  +   G  +  + ++ +M  +
Sbjct: 185 TLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEK 244

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
            V  D  +Y   ++         E       +   G   D  SF  +I     +G    A
Sbjct: 245 NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEA 304

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
             ++ +    G +P+   F  ++  +CK G  + A E+ +E   + +     T   L+D 
Sbjct: 305 EAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDE 364

Query: 330 LCKKGWTEKA 339
           L K    E+A
Sbjct: 365 LVKGSKREEA 374


>AT1G63630.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:23587613-23588220 FORWARD
           LENGTH=152
          Length = 152

 Score =  102 bits (255), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 84/134 (62%), Gaps = 1/134 (0%)

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
           P   T+ ++IDG CK+   + A R+ L  + S+   P+V+T++ +INGYC+  +++    
Sbjct: 8   PTTITYNSMIDGFCKQDRVDDAKRM-LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
           +   M  +G++ NT TYTTLI G C+ G+ + A DL+N M   G +P+  T++ ++ GLC
Sbjct: 67  IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126

Query: 438 KKGRVQEAYKMLKD 451
            K  +++A+ +L+D
Sbjct: 127 SKKELRKAFAILED 140



 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 79/137 (57%)

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL 413
           P  +TY +MI+G+C+ D+++ A+ +L  M  +G  P+  T++TLI+G+CKA   +   ++
Sbjct: 8   PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
              M R G   N  TY  ++ G C+ G +  A  +L +    G+  D +T++ +++  C 
Sbjct: 68  FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127

Query: 474 QADIKQALALFSKMAKS 490
           + ++++A A+   + KS
Sbjct: 128 KKELRKAFAILEDLQKS 144



 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 70/131 (53%)

Query: 462 VTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEE 521
           +TYN +I   CKQ  +  A  +   MA  G  PD+ +++TLI  +C+ KR+      F E
Sbjct: 11  ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70

Query: 522 AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSK 581
             R G +    TYT++I G+C+ G+L  A    + M   G  PD I +  +++GLC + +
Sbjct: 71  MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130

Query: 582 LDEARGLYDSM 592
           L +A  + + +
Sbjct: 131 LRKAFAILEDL 141



 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 75/140 (53%)

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
           M    + P T TY ++IDG CK    + A  +++ M+ +G SP++ T++ +++G CK  R
Sbjct: 1   MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60

Query: 442 VQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTT 501
           V    ++  +    G+ A+ VTY  LI   C+  D+  A  L ++M   G+ PD  ++  
Sbjct: 61  VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120

Query: 502 LIAVFCREKRMSESEMFFEE 521
           ++A  C +K + ++    E+
Sbjct: 121 MLAGLCSKKELRKAFAILED 140



 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 3/147 (2%)

Query: 417 MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
           M R    P   TYN+++DG CK+ RV +A +ML      G   D VT++ LI+ +CK   
Sbjct: 1   MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
           +   + +F +M + GI  +  +YTTLI  FC+   +  ++    E +  G  P   T+  
Sbjct: 61  VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120

Query: 537 MICGYCREGNLTMA---IKFFHRMSDH 560
           M+ G C +  L  A   ++   +  DH
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSEDH 147



 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 72/142 (50%)

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + P + +Y  M+  +CK   V +A + L  M  +G   D  +F+ +I+ +C+       +
Sbjct: 6   IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F +    G+  N + +T++I G C+ G +  A ++L EM+  G  P+  T   ++ GL
Sbjct: 66  EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125

Query: 331 CKKGWTEKAFRLFLKLVRSENN 352
           C K    KAF +   L +SE++
Sbjct: 126 CSKKELRKAFAILEDLQKSEDH 147



 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 70/136 (51%)

Query: 176 MVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEAD 235
           + P T T N ++   C+   VD A+ + + M+++G  PD  ++  ++  YCK   V    
Sbjct: 6   IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65

Query: 236 KWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGL 295
           +    M  RG + +  ++T +I  FC+ G    A    ++    G+ P+ I F  M+ GL
Sbjct: 66  EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125

Query: 296 CKRGSIKQAFEMLEEM 311
           C +  +++AF +LE++
Sbjct: 126 CSKKELRKAFAILEDL 141



 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 59/105 (56%)

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
           +R+   PT  TY SMI G+C++  +  A +    M+  GC PD + + TLI+G CK  ++
Sbjct: 2   LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 61

Query: 583 DEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL 627
           D    ++  M  +G++   VT  TL + +C++ D  +A  +L+ +
Sbjct: 62  DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106



 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 71/143 (49%)

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGN 546
           M +  I P   +Y ++I  FC++ R+ +++   +     G  P   T++++I GYC+   
Sbjct: 1   MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60

Query: 547 LTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRIT 606
           +   ++ F  M   G V +++ Y TLI G C+   LD A+ L + MI  G+ P  +T   
Sbjct: 61  VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120

Query: 607 LAYEYCKIDDCCSAMVILDRLEK 629
           +    C   +   A  IL+ L+K
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143



 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVI 623
           P +I Y ++I G CKQ ++D+A+ + DSM  KG  P  VT  TL   YCK     + M I
Sbjct: 8   PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67

Query: 624 LDRLEKKLWIR---TATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVT----LAAFMT 676
              + ++  +    T TTL+   C    +  A    ++++      + +T    LA   +
Sbjct: 68  FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127

Query: 677 ACYESNKYALVSDL 690
                  +A++ DL
Sbjct: 128 KKELRKAFAILEDL 141



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 42/76 (55%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  + +  R+   +E+  EMH +G+V NT T   ++   C++G +D AQ L  EM + G
Sbjct: 51  LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 110

Query: 211 VHPDSASYRVMVVAYC 226
           V PD  ++  M+   C
Sbjct: 111 VAPDYITFHCMLAGLC 126


>AT1G04840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:1362867-1364962 REVERSE
           LENGTH=665
          Length = 665

 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 164/380 (43%), Gaps = 28/380 (7%)

Query: 240 VMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLIN-----FTSMIEG 294
           +ML  G   D  +F  ++    + GF     R+  +        N ++       S+++ 
Sbjct: 116 LMLRLGVKPDRLTFPFVLKSNSKLGF-----RWLGRALHAATLKNFVDCDSFVRLSLVDM 170

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
             K G +K AF++ EE   +  K ++     LI+G C+     K   +   L RS   + 
Sbjct: 171 YAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRA----KDMHMATTLFRSMPER- 225

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           N  +++ +I GY    +LNRA+ L   M E+ ++    ++TTLI+G  + G++E A    
Sbjct: 226 NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV----SWTTLINGFSQTGDYETAISTY 281

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
             M  +G  PN  T  A++    K G +    ++      NG++ D+     L+  + K 
Sbjct: 282 FEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKC 341

Query: 475 ADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
            ++  A  +FS M       DI S+T +I  +    R  ++   F + +  G  P +  +
Sbjct: 342 GELDCAATVFSNMN----HKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVF 397

Query: 535 TSMICGYCREGNLTMAIKFFHRMS-DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMI 593
            +++        + + + FF  M  D+   P    Y  ++  L +  KL+EA  L ++M 
Sbjct: 398 LAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP 457

Query: 594 EKGLIPCEVTRITLAYEYCK 613
               I  ++T     Y  CK
Sbjct: 458 ----INPDLTTWAALYRACK 473



 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/326 (21%), Positives = 122/326 (37%), Gaps = 60/326 (18%)

Query: 136 IGNGNLQKAHEVMQCM-----------VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLN 184
           + +G L +A ++ + M           +  F++ G  + A+   FEM  +G+ PN  T+ 
Sbjct: 238 VDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIA 297

Query: 185 LVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDR 244
            V+    + G +     +   +   G+  D A    +V  Y K G            LD 
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE-----------LDC 346

Query: 245 GFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQA 304
              V                           FS+M  K +++++T+MI+G    G   QA
Sbjct: 347 AATV---------------------------FSNMNHK-DILSWTAMIQGWAVHGRFHQA 378

Query: 305 FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN 364
            +   +M+  G KP+     A++         +     F  +      +P +  Y  +++
Sbjct: 379 IQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVD 438

Query: 365 GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA-GNFERAFDL-MNLMSREGF 422
              R  KLN A  L+  M    + P+  T+  L    CKA   + RA  +  NL+     
Sbjct: 439 LLGRAGKLNEAHELVENMP---INPDLTTWAALYRA-CKAHKGYRRAESVSQNLLE---L 491

Query: 423 SPNICTYNAIVDGL-CKKGRVQEAYK 447
            P +C     +D     KG +Q+  K
Sbjct: 492 DPELCGSYIFLDKTHASKGNIQDVEK 517


>AT3G47840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:17651912-17654032 FORWARD
           LENGTH=706
          Length = 706

 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 146/331 (44%), Gaps = 13/331 (3%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ ++  IG+  +AVE   +M N  + PN QT   +      +  + + + L   + + G
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           ++   +    M+  Y   GN++ A    SV+       D  S++ II  +C+ GF     
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSA----SVLFQGMRCRDIISWSTIIGGYCQAGFGEEGF 396

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           +YF      G KP      S++        I+   ++    +C G + N    ++LI+  
Sbjct: 397 KYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMY 456

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K G  ++A  +F      E ++ ++++ TAMINGY    K   A  L  +  + G  P+
Sbjct: 457 SKCGSIKEASMIF-----GETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPD 511

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSRE-GFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           + T+ +++     +G  +  F   N+M       P    Y  +VD LC+ GR+ +A KM+
Sbjct: 512 SVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMI 571

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQA 480
            +      + D V +  L+     + DI++ 
Sbjct: 572 NE---MSWKKDDVVWTTLLIACKAKGDIERG 599



 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/421 (21%), Positives = 175/421 (41%), Gaps = 25/421 (5%)

Query: 184 NLVMKIACEMGLVDYAQY-----LFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWL 238
           N V   A   GLV   +Y      F EMS      D+ ++ + + A   +  V       
Sbjct: 173 NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232

Query: 239 SVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKR 298
           + ++ RGF+        + + + E G     L  F   S+     +++++TS+I    + 
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER----DVVSWTSLIVAYKRI 288

Query: 299 GSIKQAFEMLEEMVCQGWKPNVYTHTALIDG---LCKKGWTEKAFRLFLKLVRSENNKPN 355
           G   +A E   +M      PN  T  ++      L +  W E+     L L  +++    
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDS---- 344

Query: 356 VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
           +    +M+  Y     L  A +L   M+ + +I    +++T+I G+C+AG  E  F   +
Sbjct: 345 LSVSNSMMKMYSTCGNLVSASVLFQGMRCRDII----SWSTIIGGYCQAGFGEEGFKYFS 400

Query: 416 LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQA 475
            M + G  P      +++        ++   ++       GLE +    + LI+ + K  
Sbjct: 401 WMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCG 460

Query: 476 DIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYT 535
            IK+A  +F +  +     DI S T +I  +    +  E+   FE++++ GF P   T+ 
Sbjct: 461 SIKEASMIFGETDRD----DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFI 516

Query: 536 SMICGYCREGNLTMAIKFFHRMSD-HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
           S++      G L +   +F+ M + +   P    YG ++  LC+  +L +A  + + M  
Sbjct: 517 SVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSW 576

Query: 595 K 595
           K
Sbjct: 577 K 577



 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/511 (18%), Positives = 185/511 (36%), Gaps = 49/511 (9%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++      GR KE +    EM     + +T T  + +K    +  V Y + +   +  RG
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
                     +   Y + G + +       M +R    D  S+T +I  +   G   +A+
Sbjct: 240 FVTTLCVANSLATMYTECGEMQDGLCLFENMSER----DVVSWTSLIVAYKRIGQEVKAV 295

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F K  +  + PN   F SM         +    ++   ++  G   ++    +++   
Sbjct: 296 ETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMY 355

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
              G    A  LF  +        ++++++ +I GYC+             M++ G  P 
Sbjct: 356 STCGNLVSASVLFQGM-----RCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPT 410

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
                +L+         E    +  L    G   N    +++++   K G ++EA  +  
Sbjct: 411 DFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFG 470

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +   +    D V+   +I+ + +    K+A+ LF K  K G +PD  ++ +++       
Sbjct: 471 ETDRD----DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526

Query: 511 RMSESEMFFEEAVR-FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
           ++     +F      +   P K  Y  M+   CR G L+ A K  + MS      D + +
Sbjct: 527 QLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWK---KDDVVW 583

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIP-CEVTRITLAYEYC---------------- 612
            TL+     +  ++  R   + ++E  L P C    +TLA  Y                 
Sbjct: 584 TTLLIACKAKGDIERGRRAAERILE--LDPTCATALVTLANIYSSTGNLEEAANVRKNMK 641

Query: 613 -------------KIDDCCSAMVILDRLEKK 630
                        KI DC SA V  DR   +
Sbjct: 642 AKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQ 672



 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 90/471 (19%), Positives = 172/471 (36%), Gaps = 43/471 (9%)

Query: 249 DNASFTLIISEFCEKGFATRALRYFH--KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
           D  S+T II  +     +  AL  F   +  D  + P+    + +++   +  +I     
Sbjct: 70  DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGES 129

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           +    V      +VY  ++L+D   + G  +K+ R+F     SE    N +T+TA+I G 
Sbjct: 130 LHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVF-----SEMPFRNAVTWTAIITGL 184

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNI 426
               +          M     + +T T+   +         +    +   +   GF   +
Sbjct: 185 VHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTL 244

Query: 427 CTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSK 486
           C  N++     + G +Q+   +    F N  E D V++  LI  + +     +A+  F K
Sbjct: 245 CVANSLATMYTECGEMQDGLCL----FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIK 300

Query: 487 MAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR-------------- 532
           M  S + P+  ++ ++ +      R+   E      +  G   +                
Sbjct: 301 MRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGN 360

Query: 533 -----------------TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
                            +++++I GYC+ G      K+F  M   G  P   A  +L+S 
Sbjct: 361 LVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSV 420

Query: 576 LCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRT 635
               + ++  R ++   +  GL      R +L   Y K      A +I    ++   I +
Sbjct: 421 SGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDD-IVS 479

Query: 636 ATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYAL 686
            T ++       K   A   F K L + F  + VT  + +TAC  S +  L
Sbjct: 480 LTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDL 530


>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
           (TPR)-like superfamily protein | chr4:16290141-16292612
           REVERSE LENGTH=823
          Length = 823

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/430 (21%), Positives = 186/430 (43%), Gaps = 27/430 (6%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+  + + G  KEA+ +     N     ++ T+  ++    E G  +    +       G
Sbjct: 222 MISGYCQSGNAKEALTL----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           +  +      ++  Y + G + +  K    + DR ++ D  S+  II  +       RA+
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQK----VFDRMYVRDLISWNSIIKAYELNEQPLRAI 333

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW-KPNVYTHTALIDG 329
             F +     ++P+ +   S+   L + G I+    +    + +GW   ++    A++  
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPN--VLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
             K G  + A  +F       N  PN  V+++  +I+GY ++   + A  +   M+E+G 
Sbjct: 394 YAKLGLVDSARAVF-------NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 446

Query: 388 IP-NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           I  N  T+ +++    +AG   +   L   + + G   ++    ++ D   K GR+++A 
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL 506

Query: 447 KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF 506
            +    F+     + V +N LI+ H      ++A+ LF +M   G++PD  ++ TL++  
Sbjct: 507 SL----FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562

Query: 507 CREKRMSESEMFFE-EAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
                + E +  FE     +G  P+ + Y  M+  Y R G L  A+KF   MS     PD
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQ---PD 619

Query: 566 SIAYGTLISG 575
           +  +G L+S 
Sbjct: 620 ASIWGALLSA 629



 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 90/426 (21%), Positives = 186/426 (43%), Gaps = 36/426 (8%)

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGF-LVDNASFT 254
           V  A+ LF+EM  R    D  S+  M+  YC+ GN  EA     + L  G   +D+ +  
Sbjct: 201 VGNARILFDEMPVR----DMGSWNAMISGYCQSGNAKEA-----LTLSNGLRAMDSVTVV 251

Query: 255 LIISEFCEKGFATRALRYFHKFS-DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
            ++S   E G   R +   H +S   GL+  L     +I+   + G ++   ++ + M  
Sbjct: 252 SLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
           +    ++ +  ++I          +A  LF ++ R    +P+ LT  ++ +   +   + 
Sbjct: 311 R----DLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIR 365

Query: 374 RAEMLLGRMKEQG-LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
               + G    +G  + +      ++  + K G  + A  + N +     + ++ ++N I
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP----NTDVISWNTI 421

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNG-LEADKVTYNILISEHCKQAD-IKQALALFSKMAKS 490
           + G  + G   EA +M       G + A++ T+ + +   C QA  ++Q + L  ++ K+
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW-VSVLPACSQAGALRQGMKLHGRLLKN 480

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
           G+  D+   T+L  ++ +  R+ ++   F +  R   +P    + ++I  +   G+   A
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP----WNTLIACHGFHGHGEKA 536

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM-IEKGLIPCEVTRITLAY 609
           +  F  M D G  PD I + TL+S       +DE +  ++ M  + G+ P      +L +
Sbjct: 537 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP------SLKH 590

Query: 610 EYCKID 615
             C +D
Sbjct: 591 YGCMVD 596



 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 107/500 (21%), Positives = 210/500 (42%), Gaps = 65/500 (13%)

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS-DM 279
           +V  YC +GNV  A      + +R    D  ++ L+IS +   G ++  +R F  F    
Sbjct: 92  LVNLYCYLGNVALARHTFDHIQNR----DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147

Query: 280 GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKA 339
           GL P+   F S+++  C+  ++    ++    +  G+  +VY   +LI    +      A
Sbjct: 148 GLTPDYRTFPSVLKA-CR--TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID 399
             LF      E    ++ ++ AMI+GYC+      A  L   ++      ++ T  +L+ 
Sbjct: 205 RILF-----DEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLS 255

Query: 400 GHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA 459
              +AG+F R   + +   + G    +   N ++D   + GR+++  K+    F      
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV----FDRMYVR 311

Query: 460 DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF--------CRE-K 510
           D +++N +I  +       +A++LF +M  S IQPD  +  +L ++         CR  +
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371

Query: 511 RMSESEMFFEEAV-----------RFGFIPTKR------------TYTSMICGYCREGNL 547
             +  + +F E +           + G + + R            ++ ++I GY + G  
Sbjct: 372 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFA 431

Query: 548 TMAIKFFHRMSDHGCVPDSIAYGTLISGL--CKQS-KLDEARGLYDSMIEKGLIPCEVTR 604
           + AI+ ++ M + G +  +   GT +S L  C Q+  L +   L+  +++ GL       
Sbjct: 432 SEAIEMYNIMEEEGEIAAN--QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVV 489

Query: 605 ITLAYEYCK---IDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLD 661
            +LA  Y K   ++D  S    + R+    W     TL+           A + F ++LD
Sbjct: 490 TSLADMYGKCGRLEDALSLFYQIPRVNSVPW----NTLIACHGFHGHGEKAVMLFKEMLD 545

Query: 662 MDFHVNRVTLAAFMTACYES 681
                + +T    ++AC  S
Sbjct: 546 EGVKPDHITFVTLLSACSHS 565


>AT4G30825.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:15009605-15012319 FORWARD
           LENGTH=904
          Length = 904

 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/485 (20%), Positives = 204/485 (42%), Gaps = 20/485 (4%)

Query: 156 AEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDS 215
           A+ G    A++ + +M   G    +  L ++++   ++G +D    + +      +  + 
Sbjct: 430 AKYGDRDGAIKTIEDMTGIG-CQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQ 488

Query: 216 ASYRVMVVAYCKMGNV------LEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
            S+  +V+AY K G V      L   KW      R    ++  + L+I    E G  T A
Sbjct: 489 TSFSSLVMAYVKHGMVDDCLGLLREKKW------RDSAFESHLYHLLICSCKESGQLTDA 542

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           ++ ++   +   + NL   ++MI+     G   +A ++   +   G   +    + ++  
Sbjct: 543 VKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRM 602

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
             K G  E+A  +   +   ++  P+V  +  M+  Y + D  ++ + L  R+++ G+  
Sbjct: 603 YVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHW 662

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           N   Y  +I+   +A   +        M R GF+PN  T+N ++D   K    ++  ++ 
Sbjct: 663 NQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF 722

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
                +G+  D ++YN +I+ + K  D     +    M   G    + +Y TL+  + ++
Sbjct: 723 LLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKD 781

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
           K+M +     +   +    P   TY  MI  Y  +G +         + + G  PD  +Y
Sbjct: 782 KQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSY 841

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK 629
            TLI        ++EA GL   M  + +IP +VT   L     + D+       L+ ++ 
Sbjct: 842 NTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDE------FLEAIKW 895

Query: 630 KLWIR 634
            LW++
Sbjct: 896 SLWMK 900



 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 101/452 (22%), Positives = 191/452 (42%), Gaps = 40/452 (8%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFE--MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFE 204
           ++  +++++ ++G++ + V  V +   HN   +  T   +LVM    + G+VD    L  
Sbjct: 455 ILGIILQAYEKVGKI-DVVPCVLKGSFHNHIRLNQTSFSSLVMAYV-KHGMVDDCLGLLR 512

Query: 205 EMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKG 264
           E   R    +S  Y +++ +  + G + +A K  +  ++    ++    + +I  +   G
Sbjct: 513 EKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMG 572

Query: 265 FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ-GWKPNVYTH 323
             + A + +      G+  + I F+ ++    K GS+++A  +LE M  Q    P+VY  
Sbjct: 573 EFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLF 632

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
             ++    K    +K   L+ + +R      N   Y  +IN   R   L+        M 
Sbjct: 633 RDMLRIYQKCDLQDKLQHLYYR-IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 691

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR------------------------ 419
             G  PNT T+  L+D + KA  F++  +L  L  R                        
Sbjct: 692 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTN 751

Query: 420 ----------EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILIS 469
                     +GFS ++  YN ++D   K  ++++   +LK    +    D  TYNI+I+
Sbjct: 752 MSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811

Query: 470 EHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
            + +Q  I +   +  ++ +SG+ PD+ SY TLI  +     + E+    +E      IP
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIP 871

Query: 530 TKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
            K TYT+++    R      AIK+   M   G
Sbjct: 872 DKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903



 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 152/357 (42%), Gaps = 57/357 (15%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           F ++I    K+G++K A +    M+  G +PNV T   ++ GL +K W  +        +
Sbjct: 213 FNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVAT-IGMLMGLYQKNWNVEEAEFAFSHM 271

Query: 348 RSENNKPNVL---TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
           R    K  ++    Y++MI  Y R    ++AE ++  MK+  +      +  +++ + + 
Sbjct: 272 R----KFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQ 327

Query: 405 GNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY 464
           G  E A  ++  M   GFSPNI                                   + Y
Sbjct: 328 GKMELAESILVSMEAAGFSPNI-----------------------------------IAY 352

Query: 465 NILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR 524
           N LI+ + K   ++ A  LF ++   G++PD  SY ++I  + R     E++ +++E  R
Sbjct: 353 NTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKR 412

Query: 525 FGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDE 584
            G+ P      ++I    + G+   AIK    M+  GC   SI  G ++    K  K+D 
Sbjct: 413 CGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL-GIILQAYEKVGKIDV 471

Query: 585 A----RGLYDSMIEKGLIPCEVTRITLAY-EYCKIDDCCSAMVILDRLEKKLWIRTA 636
                +G + + I   L     + + +AY ++  +DDC      L  L +K W  +A
Sbjct: 472 VPCVLKGSFHNHIR--LNQTSFSSLVMAYVKHGMVDDC------LGLLREKKWRDSA 520



 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 109/568 (19%), Positives = 227/568 (39%), Gaps = 58/568 (10%)

Query: 135 LIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMG 194
           L G    QK+++V   ++ +  + G +K A +    M   G+ PN  T+ ++M +  +  
Sbjct: 200 LCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNW 259

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT 254
            V+ A++ F  M   G+  +SA Y  M+  Y ++    +A++ + +M      +   ++ 
Sbjct: 260 NVEEAEFAFSHMRKFGIVCESA-YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWL 318

Query: 255 LIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ 314
           ++++ + ++G    A          G  PN+I + ++I G  K   ++ A  +   +   
Sbjct: 319 VMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNI 378

Query: 315 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR 374
           G +P+  ++ ++I+G                                    + R D    
Sbjct: 379 GLEPDETSYRSMIEG------------------------------------WGRADNYEE 402

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVD 434
           A+     +K  G  PN+    TLI+   K G+ + A   +  M+  G     C Y++I+ 
Sbjct: 403 AKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG-----CQYSSILG 457

Query: 435 GLC----KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKS 490
            +     K G++     +LK  FHN +  ++ +++ L+  + K   +   L L  +    
Sbjct: 458 IILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWR 517

Query: 491 GIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMA 550
               + H Y  LI       +++++   +   +           ++MI  Y   G  + A
Sbjct: 518 DSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEA 577

Query: 551 IKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE-KGLIPC-----EVTR 604
            K +  +   G V D I +  ++    K   L+EA  + + M E K ++P      ++ R
Sbjct: 578 EKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLR 637

Query: 605 ITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAAL--FFHKLLDM 662
           I   Y+ C + D    +    R     W +     V   C+ R + +  L   F +++  
Sbjct: 638 I---YQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCA-RALPLDELSGTFEEMIRY 693

Query: 663 DFHVNRVTLAAFMTACYESNKYALVSDL 690
            F  N VT    +    ++  +  V++L
Sbjct: 694 GFTPNTVTFNVLLDVYGKAKLFKKVNEL 721



 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 119/615 (19%), Positives = 214/615 (34%), Gaps = 124/615 (20%)

Query: 104 GSMVALSFFHWAIGYSRF--RHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRL 161
           G ++ L   +W +  + F   H  +  IVC ++                M+  +  + RL
Sbjct: 249 GMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAY-------------SSMITIYTRL-RL 294

Query: 162 KEAVEMVFEMHNQGMVPNTQTLNLVMKIA-CEMGLVDYAQYLFEEMSARGVHPDSASYRV 220
            +  E V ++  Q  V       LVM  A  + G ++ A+ +   M A G  P+  +Y  
Sbjct: 295 YDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNT 354

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           ++  Y K+  +  A      + + G   D  S+  +I  +        A  Y+ +    G
Sbjct: 355 LITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCG 414

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV---CQ-----GWKPNVYTHTALID---- 328
            KPN  N  ++I    K G    A + +E+M    CQ     G     Y     ID    
Sbjct: 415 YKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPC 474

Query: 329 ----------------------------------GLCK-KGWTEKAFRLFL--------- 344
                                             GL + K W + AF   L         
Sbjct: 475 VLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCK 534

Query: 345 ------KLVRSENNK------PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
                   V+  N+K       N+   + MI+ Y    + + AE L   +K  G++ +  
Sbjct: 535 ESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRI 594

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSRE-------------------------------- 420
            ++ ++  + KAG+ E A  ++ +M  +                                
Sbjct: 595 GFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYR 654

Query: 421 ----GFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQAD 476
               G   N   YN +++   +   + E     ++    G   + VT+N+L+  + K   
Sbjct: 655 IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL 714

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
            K+   LF    + G+  D+ SY T+IA + + K  +      +     GF  +   Y +
Sbjct: 715 FKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNT 773

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           ++  Y ++  +        RM      PD   Y  +I+   +Q  +DE   +   + E G
Sbjct: 774 LLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESG 833

Query: 597 LIP--CEVTRITLAY 609
           L P  C    +  AY
Sbjct: 834 LGPDLCSYNTLIKAY 848



 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 109/275 (39%), Gaps = 10/275 (3%)

Query: 121 FRHFMRLYIVCATS--------LIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMH 172
           FR  +R+Y  C            I    +    E+  C++   A    L E      EM 
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 691

Query: 173 NQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVL 232
             G  PNT T N+++ +  +  L      LF      GV  D  SY  ++ AY K  +  
Sbjct: 692 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYT 750

Query: 233 EADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMI 292
                +  M   GF V   ++  ++  + +     +      +       P+   +  MI
Sbjct: 751 NMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI 810

Query: 293 EGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN 352
               ++G I +  ++L+E+   G  P++ ++  LI      G  E+A  L +K +R  N 
Sbjct: 811 NIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGL-VKEMRGRNI 869

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGL 387
            P+ +TYT ++    R+D+   A      MK+ G+
Sbjct: 870 IPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904


>AT3G03580.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:860695-863343 REVERSE
           LENGTH=882
          Length = 882

 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/448 (22%), Positives = 191/448 (42%), Gaps = 49/448 (10%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++R+F++ G   EA+E   ++    + P+  T   V+K    +   +    ++E++   G
Sbjct: 77  IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
              D      +V  Y +MG +  A +    M  R    D  S+  +IS +   G+   AL
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR----DLVSWNSLISGYSSHGYYEEAL 192

Query: 271 RYFHKFSDMGLKPNLINFTSMIEG-----LCKRGSIKQAFEM-------------LEEMV 312
             +H+  +  + P+    +S++       + K+G     F +             L  M 
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252

Query: 313 CQGWKP-------------NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
            +  +P             +  ++  +I G  K    E++ R+FL+ +  +  KP++LT 
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL--DQFKPDLLTV 310

Query: 360 TAMIN--GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLM 417
           ++++   G+ RD  L+ A+ +   M + G +  +     LID + K G+   A D+ N M
Sbjct: 311 SSVLRACGHLRD--LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
                  +  ++N+I+ G  + G + EA K+ K       +AD +TY +LIS   + AD+
Sbjct: 369 E----CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424

Query: 478 KQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSM 537
           K    L S   KSGI  D+     LI ++ +   + +S   F        +    T+ ++
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV----TWNTV 480

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPD 565
           I    R G+    ++   +M     VPD
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPD 508



 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 108/526 (20%), Positives = 203/526 (38%), Gaps = 66/526 (12%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  ++  G  +EA+E+  E+ N  +VP++ T++ V+     + +V   Q L       G
Sbjct: 178 LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG 237

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V+        +V  Y K     +A +    + D   + D+ S+  +I  + +      ++
Sbjct: 238 VNSVVVVNNGLVAMYLKFRRPTDARR----VFDEMDVRDSVSYNTMICGYLKLEMVEESV 293

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
           R F +  D   KP+L+  +S++        +  A  +   M+  G+         LID  
Sbjct: 294 RMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVY 352

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K G    A  +F  +        + +++ ++I+GY +   L  A  L   M       +
Sbjct: 353 AKCGDMITARDVFNSM-----ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             TY  LI    +  + +    L +   + G   ++   NA++D   K G V ++ K+  
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI-- 465

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY----------- 499
             F +    D VT+N +IS   +  D    L + ++M KS + PD+ ++           
Sbjct: 466 --FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523

Query: 500 ------------------------TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYT 535
                                     LI ++ +   +  S   FE   R   +    T+T
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV----TWT 579

Query: 536 SMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLY------ 589
            MI  Y   G    A++ F  M   G VPDS+ +  +I        +DE    +      
Sbjct: 580 GMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTH 639

Query: 590 ---DSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLW 632
              D MIE     C V  ++ + +  K ++   AM I  + +  +W
Sbjct: 640 YKIDPMIEH--YACVVDLLSRSQKISKAEEFIQAMPI--KPDASIW 681



 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/287 (19%), Positives = 120/287 (41%), Gaps = 19/287 (6%)

Query: 397 LIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNG 456
           LID   K  +F      +++  R   + N+  +N+I+    K G   EA +       + 
Sbjct: 45  LID---KYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESK 101

Query: 457 LEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESE 516
           +  DK T+  +I       D +    ++ ++   G + D+     L+ ++ R   ++ + 
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRAR 161

Query: 517 MFFEEAVRFGFIPTKR--TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
             F+E      +P +   ++ S+I GY   G    A++ +H + +   VPDS    +++ 
Sbjct: 162 QVFDE------MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLP 215

Query: 575 GLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIR 634
                  + + +GL+   ++ G+    V    L   Y K      A  + D ++    +R
Sbjct: 216 AFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD----VR 271

Query: 635 TATTLVRKLCSERKVGM---AALFFHKLLDMDFHVNRVTLAAFMTAC 678
            + +    +C   K+ M   +   F + LD  F  + +T+++ + AC
Sbjct: 272 DSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRAC 317


>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:3791454-3793883 REVERSE
           LENGTH=809
          Length = 809

 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 101/474 (21%), Positives = 185/474 (39%), Gaps = 45/474 (9%)

Query: 143 KAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYL 202
           K + +   M++ FA++  L +A++    M    + P       ++K+  +   +   + +
Sbjct: 98  KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157

Query: 203 FEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCE 262
              +   G   D  +   +   Y K   V EA K    M +R    D  S+  I++ + +
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQ 213

Query: 263 KGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYT 322
            G A  AL       +  LKP+ I   S++  +     I    E+    +  G+   V  
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
            TAL+D   K G  E A +LF  ++       NV+++ +MI+ Y +++    A ++  +M
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLER-----NVVSWNSMIDAYVQNENPKEAMLIFQKM 328

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
            ++G+ P   +    +      G+ ER   +  L    G   N+   N+++   CK   V
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
             A  M    F        V++N +I    +      AL  FS+M    ++PD  +Y ++
Sbjct: 389 DTAASM----FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSV 444

Query: 503 IAVF-------------------CREKRMSESEMFFEEAVRFGFIPTKR----------- 532
           I                      C +K +  +    +   + G I   R           
Sbjct: 445 ITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHV 504

Query: 533 -TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
            T+ +MI GY   G    A++ F  M      P+ + + ++IS  C  S L EA
Sbjct: 505 TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA-CSHSGLVEA 557



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/384 (19%), Positives = 160/384 (41%), Gaps = 15/384 (3%)

Query: 233 EADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMI 292
           E  + L ++   G   ++   T ++S FC  G    A R F        K N++ + +M+
Sbjct: 52  ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS---KLNVL-YHTML 107

Query: 293 EGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENN 352
           +G  K   + +A +    M     +P VY  T L+  +C      +  +    L+     
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLK-VCGDEAELRVGKEIHGLLVKSGF 166

Query: 353 KPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFD 412
             ++   T + N Y +  ++N A  +  RM E+ L+    ++ T++ G+ + G    A +
Sbjct: 167 SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLV----SWNTIVAGYSQNGMARMALE 222

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           ++  M  E   P+  T  +++  +     +    ++      +G ++       L+  + 
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           K   ++ A  LF  M    ++ ++ S+ ++I  + + +   E+ + F++ +  G  PT  
Sbjct: 283 KCGSLETARQLFDGM----LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMS-DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDS 591
           +    +      G+L    +F H++S + G   +     +LIS  CK  ++D A  ++  
Sbjct: 339 SVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397

Query: 592 MIEKGLIPCEVTRITLAYEYCKID 615
           +  + L+      +  A     ID
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPID 421



 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/362 (19%), Positives = 145/362 (40%), Gaps = 40/362 (11%)

Query: 300 SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
           S+K+  ++L  +   G     +  T L+   C+ G  ++A R+F  +    ++K NVL Y
Sbjct: 49  SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPI----DSKLNVL-Y 103

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
             M+ G+ +   L++A     RM+   + P    +T L+             ++  L+ +
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
            GFS ++     + +   K  +V EA K+    F    E D V++N +++ + +    + 
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKV----FDRMPERDLVSWNTIVAGYSQNGMARM 219

Query: 480 ALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGF------------ 527
           AL +   M +  ++P   +  +++      + +S  +     A+R GF            
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279

Query: 528 -------IPTKR------------TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
                  + T R            ++ SMI  Y +  N   A+  F +M D G  P  ++
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLE 628
               +        L+  R ++   +E GL        +L   YCK  +  +A  +  +L+
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399

Query: 629 KK 630
            +
Sbjct: 400 SR 401



 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 141/346 (40%), Gaps = 50/346 (14%)

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF 253
           G ++ A+ LF+ M  R V     S+  M+ AY +  N  EA      MLD G    + S 
Sbjct: 285 GSLETARQLFDGMLERNV----VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340

Query: 254 TLIISEFCEKGFATRALRYFHKFS-DMGLKPN---------------------------- 284
              +    + G   R  R+ HK S ++GL  N                            
Sbjct: 341 MGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399

Query: 285 ---LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFR 341
              L+++ +MI G  + G    A     +M  +  KP+ +T+ ++I  + +   T  A  
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 342 LFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGH 401
           +   ++RS  +K NV   TA+++ Y +   +  A ++   M E+    +  T+  +IDG+
Sbjct: 460 IHGVVMRSCLDK-NVFVTTALVDMYAKCGAIMIARLIFDMMSER----HVTTWNAMIDGY 514

Query: 402 CKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK---MLKDGFHNGLE 458
              G  + A +L   M +    PN  T+ +++      G V+   K   M+K+ +   L 
Sbjct: 515 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELS 574

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
            D   Y  ++    +   + +A     +M    ++P ++ Y  ++ 
Sbjct: 575 MDH--YGAMVDLLGRAGRLNEAWDFIMQMP---VKPAVNVYGAMLG 615



 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 17/226 (7%)

Query: 196 VDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL 255
           +D   Y F +M +R V PD+ +Y  ++ A  ++ ++    KW+  ++ R  L  N   T 
Sbjct: 420 IDALNY-FSQMRSRTVKPDTFTYVSVITAIAEL-SITHHAKWIHGVVMRSCLDKNVFVTT 477

Query: 256 IISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG 315
            + +   K  A    R      DM  + ++  + +MI+G    G  K A E+ EEM    
Sbjct: 478 ALVDMYAKCGAIMIARLIF---DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 534

Query: 316 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
            KPN  T  ++I      G  E   + F  +  + + + ++  Y AM++   R  +LN A
Sbjct: 535 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHC---KAGNF-----ERAFDL 413
              + +M  +   P  N Y  ++ G C   K  NF     ER F+L
Sbjct: 595 WDFIMQMPVK---PAVNVYGAML-GACQIHKNVNFAEKAAERLFEL 636


>AT3G14730.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:4949385-4951346 REVERSE
           LENGTH=653
          Length = 653

 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 178/402 (44%), Gaps = 48/402 (11%)

Query: 241 MLDRGFLVDNA-SFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRG 299
           M+ +GFL D+  + T +++ + + G   RA+  F      G + ++  + ++I G    G
Sbjct: 86  MVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG-----GSERDVFGYNALISGFVVNG 140

Query: 300 SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK------AFRL----------- 342
           S   A E   EM   G  P+ YT  +L+ G      ++       AF+L           
Sbjct: 141 SPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSG 200

Query: 343 ----FLKLVRSEN---------NKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
               + K +  E+         ++ + + + A++NGY +  +   A ++  +M+E+G+  
Sbjct: 201 LVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGV 260

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           + +T T+++     +G+ +    +  L  + G   +I   NA++D   K   ++EA  + 
Sbjct: 261 SRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSI- 319

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
              F    E D  T+N ++  H    D    LALF +M  SGI+PDI + TT++    R 
Sbjct: 320 ---FEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRL 376

Query: 510 KRMSESEMFFEEAVRFGFIPTKRT----YTSMICGYCREGNLTMAIKFFHRMSDHGCVPD 565
             + +        +  G +  K +    + S++  Y + G+L  A   F  M     V D
Sbjct: 377 ASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR----VKD 432

Query: 566 SIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           S ++  +I+G   QS  + A  ++  M   G+ P E+T + L
Sbjct: 433 SASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGL 474



 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 171/397 (43%), Gaps = 22/397 (5%)

Query: 149 QCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSA 208
             ++  F   G   +A+E   EM   G++P+  T   ++K +  M L D  + +      
Sbjct: 130 NALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKK-VHGLAFK 188

Query: 209 RGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATR 268
            G   D      +V +Y K  +V +A K    + DR    D+  +  +++ + +      
Sbjct: 189 LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRD---DSVLWNALVNGYSQIFRFED 245

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           AL  F K  + G+  +    TS++      G I     +    V  G   ++    ALID
Sbjct: 246 ALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALID 305

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM--INGYCRDDKLNRAEMLLGRMKEQG 386
              K  W E+A  +F  +     ++ ++ T+ ++  ++ YC D     A  L  RM   G
Sbjct: 306 MYGKSKWLEEANSIFEAM-----DERDLFTWNSVLCVHDYCGDHDGTLA--LFERMLCSG 358

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGF----SPNICTYNAIVDGLCKKGRV 442
           + P+  T TT++    +  +  +  ++   M   G     S N   +N+++D   K G +
Sbjct: 359 IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDL 418

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           ++A +M+ D        D  ++NI+I+ +  Q+  + AL +FS M ++G++PD  ++  L
Sbjct: 419 RDA-RMVFDSMR---VKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGL 474

Query: 503 IAVFCREKRMSESEMFFEE-AVRFGFIPTKRTYTSMI 538
           +        ++E   F  +    +  +PT   Y  +I
Sbjct: 475 LQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVI 511



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/331 (19%), Positives = 133/331 (40%), Gaps = 23/331 (6%)

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT-NTYTTLIDGHCKAGNFERAFDL 413
           NV T  A +    +       + + G M  +G + ++    T+L++ + K G   RA  +
Sbjct: 59  NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILI--SEH 471
                R+ F      YNA++ G    G   +A +  ++   NG+  DK T+  L+  S+ 
Sbjct: 119 FGGSERDVFG-----YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDA 173

Query: 472 CKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTK 531
            + +D+K+   L  K+   G   D +  + L+  + +   + +++  F+E      +P +
Sbjct: 174 MELSDVKKVHGLAFKL---GFDSDCYVGSGLVTSYSKFMSVEDAQKVFDE------LPDR 224

Query: 532 RT---YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGL 588
                + +++ GY +      A+  F +M + G         +++S       +D  R +
Sbjct: 225 DDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSI 284

Query: 589 YDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRL-EKKLWIRTATTLVRKLCSER 647
           +   ++ G     V    L   Y K      A  I + + E+ L+   +   V   C + 
Sbjct: 285 HGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDH 344

Query: 648 KVGMAALFFHKLLDMDFHVNRVTLAAFMTAC 678
              +A   F ++L      + VTL   +  C
Sbjct: 345 DGTLA--LFERMLCSGIRPDIVTLTTVLPTC 373


>AT2G13600.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:5671493-5673586 FORWARD
           LENGTH=697
          Length = 697

 Score = 99.4 bits (246), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 110/472 (23%), Positives = 190/472 (40%), Gaps = 66/472 (13%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           MV  FA+  R +EA+     MH +G V N  +   V+     +  ++    +   ++   
Sbjct: 123 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 182

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
              D      +V  Y K GNV +A +    M DR  +    S+  +I+ F + G A  AL
Sbjct: 183 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV----SWNSLITCFEQNGPAVEAL 238

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQG-WKPNVYTHTALIDG 329
             F    +  ++P+ +   S+I       +IK   E+   +V     + ++    A +D 
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298

Query: 330 LCKKGWTEKAFRLFLKL-VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
             K    ++A  +F  + +R      NV+  T+MI+GY        A ++  +M E+ ++
Sbjct: 299 YAKCSRIKEARFIFDSMPIR------NVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352

Query: 389 PNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSP------------------------ 424
               ++  LI G+ + G  E A  L  L+ RE   P                        
Sbjct: 353 ----SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408

Query: 425 -----------------NICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
                            +I   N+++D   K G V+E Y +    F   +E D V++N +
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV----FRKMMERDCVSWNAM 464

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR-FG 526
           I    +     +AL LF +M +SG +PD  +   +++       + E   +F    R FG
Sbjct: 465 IIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFG 524

Query: 527 FIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
             P +  YT M+    R G L  A      M      PDS+ +G+L++  CK
Sbjct: 525 VAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ---PDSVIWGSLLAA-CK 572



 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/451 (19%), Positives = 175/451 (38%), Gaps = 61/451 (13%)

Query: 194 GLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF 253
           G ++  + +F++M  R ++    ++  +V    K+G + EAD     M +R    D  ++
Sbjct: 69  GSLEDGRQVFDKMPQRNIY----TWNSVVTGLTKLGFLDEADSLFRSMPER----DQCTW 120

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVC 313
             ++S F +      AL YF      G   N  +F S++        + +  ++   +  
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180

Query: 314 QGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLN 373
             +  +VY  +AL+D   K G    A R+F      E    NV+++ ++I  + ++    
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVF-----DEMGDRNVVSWNSLITCFEQNGPAV 235

Query: 374 RAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMN-LMSREGFSPNICTYNAI 432
            A  +   M E  + P+  T  ++I         +   ++   ++  +    +I   NA 
Sbjct: 236 EALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAF 295

Query: 433 VDGLCKKGRVQEA---------------------YKMLKDG------FHNGLEADKVTYN 465
           VD   K  R++EA                     Y M          F    E + V++N
Sbjct: 296 VDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWN 355

Query: 466 ILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRF 525
            LI+ + +  + ++AL+LF  + +  + P  +S+  ++        +          ++ 
Sbjct: 356 ALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKH 415

Query: 526 GF---------IPTKRTYTSMI--CGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
           GF         I    +   M   CG   EG L      F +M +  CV    ++  +I 
Sbjct: 416 GFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV-----FRKMMERDCV----SWNAMII 466

Query: 575 GLCKQSKLDEARGLYDSMIEKGLIPCEVTRI 605
           G  +    +EA  L+  M+E G  P  +T I
Sbjct: 467 GFAQNGYGNEALELFREMLESGEKPDHITMI 497



 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/233 (18%), Positives = 102/233 (43%), Gaps = 12/233 (5%)

Query: 362 MINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
           +I+ Y +   L     +  +M ++    N  T+ +++ G  K G  + A  L   M    
Sbjct: 61  LIDAYSKCGSLEDGRQVFDKMPQR----NIYTWNSVVTGLTKLGFLDEADSLFRSMPER- 115

Query: 422 FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQAL 481
              + CT+N++V G  +  R +EA          G   ++ ++  ++S      D+ + +
Sbjct: 116 ---DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGV 172

Query: 482 ALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGY 541
            + S +AKS    D++  + L+ ++ +   +++++  F+E      +    ++ S+I  +
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV----SWNSLITCF 228

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
            + G    A+  F  M +    PD +   ++IS     S +   + ++  +++
Sbjct: 229 EQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281


>AT3G04750.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:1301391-1303376 REVERSE
           LENGTH=661
          Length = 661

 Score = 99.4 bits (246), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/404 (23%), Positives = 175/404 (43%), Gaps = 64/404 (15%)

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLD 243
           N ++K   E+G    A+ +F    AR  HPD +S+ VM+V Y K G  LEA K    M+ 
Sbjct: 170 NSLVKFYMELGNFGVAEKVF----ARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVS 225

Query: 244 RGFLVDN--------------------------------ASFTLIISEFC--------EK 263
            G   D                                  S  LI+S           E 
Sbjct: 226 DGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKES 285

Query: 264 GFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
           G A RA        D   K ++ ++ +M+ G  + G ++ A  + ++M     K ++ + 
Sbjct: 286 GLAKRAF-------DAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP----KRDLVSW 334

Query: 324 TALIDGLCKKGWTEKAFR-LFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
            +L+ G  KKG  ++  R LF ++   E  KP+ +T  ++I+G   + +L+    + G +
Sbjct: 335 NSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLV 394

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
               L  +    + LID +CK G  ERAF    ++ +     ++  + +++ GL   G  
Sbjct: 395 IRLQLKGDAFLSSALIDMYCKCGIIERAF----MVFKTATEKDVALWTSMITGLAFHGNG 450

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA-KSGIQPDIHSYTT 501
           Q+A ++       G+  + VT   +++       +++ L +F+ M  K G  P+   Y +
Sbjct: 451 QQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGS 510

Query: 502 LIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREG 545
           L+ + CR  R+ E++   ++  +    P++  + S++   CR G
Sbjct: 511 LVDLLCRAGRVEEAKDIVQK--KMPMRPSQSMWGSILSA-CRGG 551



 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 145/330 (43%), Gaps = 34/330 (10%)

Query: 283 PNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID----------GLCK 332
           P++ +F  MI G  K+G   +A ++  +MV  G +P+ YT  +L+           G   
Sbjct: 195 PDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGV 254

Query: 333 KGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
            GW E+         R      N++   A+++ Y +  +   A+     MK++    +  
Sbjct: 255 HGWIER---------RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKK----DMR 301

Query: 393 TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML--K 450
           ++ T++ G  + G+ E A  + + M +     ++ ++N+++ G  KKG  Q   + L  +
Sbjct: 302 SWNTMVVGFVRLGDMEAAQAVFDQMPKR----DLVSWNSLLFGYSKKGCDQRTVRELFYE 357

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
                 ++ D+VT   LIS      ++     +   + +  ++ D    + LI ++C+  
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCG 417

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
            +  + M F+ A           +TSMI G    GN   A++ F RM + G  P+++   
Sbjct: 418 IIERAFMVFKTATE----KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLL 473

Query: 571 TLISGLCKQSKLDEARGLYDSMIEK-GLIP 599
            +++       ++E   +++ M +K G  P
Sbjct: 474 AVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/381 (20%), Positives = 164/381 (43%), Gaps = 32/381 (8%)

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS 277
           +  +V  Y ++GN   A+K  + M       D +SF ++I  + ++GF+  AL+ + K  
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHP----DVSSFNVMIVGYAKQGFSLEALKLYFKMV 224

Query: 278 DMGLKPNLINFTSMIE--GLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL--CKK 333
             G++P+     S++   G      + +      E     +  N+    AL+D    CK+
Sbjct: 225 SDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKE 284

Query: 334 -GWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN 392
            G  ++AF            K ++ ++  M+ G+ R   +  A+ +  +M ++ L+    
Sbjct: 285 SGLAKRAFDAM--------KKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV---- 332

Query: 393 TYTTLIDGHCKAGNFERA----FDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKM 448
           ++ +L+ G+ K G  +R     F  M ++  E   P+  T  +++ G    G +     +
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIV--EKVKPDRVTMVSLISGAANNGELSHGRWV 390

Query: 449 LKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCR 508
                   L+ D    + LI  +CK   I++A  +F    K+  + D+  +T++I     
Sbjct: 391 HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF----KTATEKDVALWTSMITGLAF 446

Query: 509 EKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH-GCVPDSI 567
                ++   F      G  P   T  +++      G +   +  F+ M D  G  P++ 
Sbjct: 447 HGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETE 506

Query: 568 AYGTLISGLCKQSKLDEARGL 588
            YG+L+  LC+  +++EA+ +
Sbjct: 507 HYGSLVDLLCRAGRVEEAKDI 527



 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 145/312 (46%), Gaps = 27/312 (8%)

Query: 305 FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN 364
           F + E++  +   P+V +   +I G  K+G++ +A +L+ K+V S+  +P+  T  +++ 
Sbjct: 182 FGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMV-SDGIEPDEYTVLSLLV 240

Query: 365 --GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTT--LIDGHCK---AGNFERAFDLMNLM 417
             G+  D +L +   + G ++ +G + ++N   +  L+D + K   +G  +RAFD M   
Sbjct: 241 CCGHLSDIRLGKG--VHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMK-- 296

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQA-D 476
                  ++ ++N +V G  + G ++ A  +    F    + D V++N L+  + K+  D
Sbjct: 297 -----KKDMRSWNTMVVGFVRLGDMEAAQAV----FDQMPKRDLVSWNSLLFGYSKKGCD 347

Query: 477 IKQALALFSKMA-KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYT 535
            +    LF +M     ++PD  +  +LI+       +S         +R          +
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSS 407

Query: 536 SMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
           ++I  YC+ G +  A   F   ++     D   + ++I+GL       +A  L+  M E+
Sbjct: 408 ALIDMYCKCGIIERAFMVFKTATEK----DVALWTSMITGLAFHGNGQQALQLFGRMQEE 463

Query: 596 GLIPCEVTRITL 607
           G+ P  VT + +
Sbjct: 464 GVTPNNVTLLAV 475



 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 37/337 (10%)

Query: 359 YTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMS 418
           + +++  Y        AE +  RM      P+ +++  +I G+ K G    A  L   M 
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPH----PDVSSFNVMIVGYAKQGFSLEALKLYFKMV 224

Query: 419 REGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTY--NILISE------ 470
            +G  P+  T   ++  L   G + +    L  G H  +E     Y  N+++S       
Sbjct: 225 SDGIEPDEYT---VLSLLVCCGHLSDI--RLGKGVHGWIERRGPVYSSNLILSNALLDMY 279

Query: 471 -HCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
             CK++ +  A   F  M K     D+ S+ T++  F R   M  ++  F++  +   + 
Sbjct: 280 FKCKESGL--AKRAFDAMKKK----DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV- 332

Query: 530 TKRTYTSMICGYCREG--NLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARG 587
              ++ S++ GY ++G    T+   F+         PD +   +LISG     +L   R 
Sbjct: 333 ---SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW 389

Query: 588 LYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK---LWIRTATTLVRKLC 644
           ++  +I   L         L   YCK      A ++     +K   LW    T+++  L 
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALW----TSMITGLA 445

Query: 645 SERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYES 681
                  A   F ++ +     N VTL A +TAC  S
Sbjct: 446 FHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHS 482



 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 13/257 (5%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMS-AR 209
           MV  F  +G ++ A  +  +M  + +V     L    K  C+   V   + LF EM+   
Sbjct: 306 MVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTV---RELFYEMTIVE 362

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT-LIISEFCEKGFATR 268
            V PD  +   ++      G  L   +W+  ++ R  L  +A  +  +I  +C+ G   R
Sbjct: 363 KVKPDRVTMVSLISGAANNGE-LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIER 421

Query: 269 ALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALID 328
           A   F   ++     ++  +TSMI GL   G+ +QA ++   M  +G  PN  T  A++ 
Sbjct: 422 AFMVFKTATE----KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLT 477

Query: 329 GLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI 388
                G  E+   +F  +       P    Y ++++  CR  ++  A+ ++   K+  + 
Sbjct: 478 ACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIV--QKKMPMR 535

Query: 389 PNTNTYTTLIDGHCKAG 405
           P+ + + +++   C+ G
Sbjct: 536 PSQSMWGSILSA-CRGG 551


>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:1181560-1183452 FORWARD
           LENGTH=630
          Length = 630

 Score = 99.4 bits (246), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 152/341 (44%), Gaps = 54/341 (15%)

Query: 274 HKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTH---------- 323
           H+  D   + N+I++T+MI    K    ++A E+L  M+    +PNVYT+          
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175

Query: 324 ----------------------TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTA 361
                                 +ALID   K G  E A  +F ++V  +      + + +
Sbjct: 176 SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGD-----AIVWNS 230

Query: 362 MINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG 421
           +I G+ ++ + + A  L  RMK  G I    T T+++         E        + +  
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-- 288

Query: 422 FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQAL 481
           +  ++   NA+VD  CK G +++A ++    F+   E D +T++ +IS   +    ++AL
Sbjct: 289 YDQDLILNNALVDMYCKCGSLEDALRV----FNQMKERDVITWSTMISGLAQNGYSQEAL 344

Query: 482 ALFSKMAKSGIQPDIHSYTTLIAVF--CREKRMSESEMFFEEAVR--FGFIPTKRTYTSM 537
            LF +M  SG +P+   Y T++ V   C    + E   ++  +++  +G  P +  Y  M
Sbjct: 345 KLFERMKSSGTKPN---YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCM 401

Query: 538 ICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
           I    + G L  A+K  + M    C PD++ + TL+ G C+
Sbjct: 402 IDLLGKAGKLDDAVKLLNEME---CEPDAVTWRTLL-GACR 438



 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 150/349 (42%), Gaps = 51/349 (14%)

Query: 295 LCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP 354
           LC +  + +A + ++ +   G   +  T++ LI   C          L  + +    ++P
Sbjct: 36  LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIK-CCISNRAVHEGNLICRHLYFNGHRP 94

Query: 355 NVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
            +     +IN Y + + LN A  L  +M ++ +I    ++TT+I  + K    ++A +L+
Sbjct: 95  MMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKALELL 150

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGF-HNGLEADKVTYNILISEHCK 473
            LM R+   PN+ TY++++        V    +ML  G    GLE+D    + LI    K
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDV----RMLHCGIIKEGLESDVFVRSALIDVFAK 206

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
             + + AL++F +M    +  D   + ++I  F +  R   +   F+   R GFI  + T
Sbjct: 207 LGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 262

Query: 534 YTSMICG---------------------------------YCREGNLTMAIKFFHRMSDH 560
            TS++                                   YC+ G+L  A++ F++M + 
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322

Query: 561 GCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAY 609
               D I + T+ISGL +     EA  L++ M   G  P  +T + + +
Sbjct: 323 ----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367


>AT2G15980.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:6951349-6952845 REVERSE
           LENGTH=498
          Length = 498

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 130/309 (42%), Gaps = 23/309 (7%)

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM- 311
           F L+I    +      A+    K    G+   +    ++I  + +R      ++M  E+ 
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224

Query: 312 ------------VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
                       +    KPN  T  +++    ++G TE   R++ ++       PNV +Y
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFE--RAFDLMNLM 417
             ++  YC    ++ AE +   MK +G++ +   Y T+I G C   NFE  +A +L   M
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLC--SNFEVVKAKELFRDM 342

Query: 418 SREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADI 477
             +G      TY  +V+G CK G V     + ++    G EAD +T   L+   C   D 
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD- 401

Query: 478 KQALALFSKMAKSGIQ-----PDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
            Q +   + + K  ++     P  + Y  L+   C + +M  +     E V  GF P++ 
Sbjct: 402 GQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQE 461

Query: 533 TYTSMICGY 541
           TY + I GY
Sbjct: 462 TYRAFIDGY 470



 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 4/235 (1%)

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR-GVHPDSASYRVMVVAYCKMGNVLEADK 236
           PN  T N +M      G  +  + ++ EM    G  P+  SY V++ AYC  G + EA+K
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302

Query: 237 WLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLC 296
               M  RG + D  ++  +I   C      +A   F      G++   + +  ++ G C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362

Query: 297 KRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEK---AFRLFLKLVRSENNK 353
           K G +     +  EM  +G++ +  T  AL++GLC     ++   A  +    VR     
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422

Query: 354 PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFE 408
           P+   Y  ++   C D K++RA  +   M  +G  P+  TY   IDG+   G+ E
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEE 477



 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 10/240 (4%)

Query: 369 DDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSRE-GFSPNIC 427
           D  ++ A+ ++G++K     PN  T+ +++    + G  E    +   M  E G SPN+ 
Sbjct: 228 DVSVDEAKKMIGKIK-----PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY 282

Query: 428 TYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKM 487
           +YN +++  C +G + EA K+ ++    G+  D V YN +I   C   ++ +A  LF  M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342

Query: 488 AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYC--REG 545
              GI+    +Y  L+  +C+   +    + + E  R GF     T  +++ G C  R+G
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402

Query: 546 NLTMAIKFFHRMSDHGCV--PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
              +      + +    +  P    Y  L+  LC+  K+D A  +   M+ KG  P + T
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQET 462



 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 7/252 (2%)

Query: 245 GFLVDNAS-FTLIISEFCEKGFATRALRYFHKFSD-MGLKPNLINFTSMIEGLCKRGSIK 302
           G +  NA+ F  ++  F  +G      R + +  + +G  PN+ ++  ++E  C RG + 
Sbjct: 239 GKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMS 298

Query: 303 QAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAM 362
           +A ++ EEM  +G   ++  +  +I GLC      KA  LF + +  +  +   LTY  +
Sbjct: 299 EAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELF-RDMGLKGIECTCLTYEHL 357

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER---AFDLMNLMSR 419
           +NGYC+   ++   ++   MK +G   +  T   L++G C   + +R   A D++    R
Sbjct: 358 VNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVR 417

Query: 420 EG-FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
           E  F P+   Y  +V  LC+ G++  A  +  +    G +  + TY   I  +    D +
Sbjct: 418 EAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEE 477

Query: 479 QALALFSKMAKS 490
            +  L  +MA+S
Sbjct: 478 TSALLAIEMAES 489



 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 125/259 (48%), Gaps = 13/259 (5%)

Query: 117 GYSRFRHFMRLYIVC---ATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVF-EMH 172
           GY  +R    L  V    A  +IG   ++        M+ SF   G   E VE ++ EM 
Sbjct: 216 GYKMYREVFGLDDVSVDEAKKMIGK--IKPNATTFNSMMVSFYREGE-TEMVERIWREME 272

Query: 173 NQ-GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNV 231
            + G  PN  + N++M+  C  GL+  A+ ++EEM  RGV  D  +Y  M+   C    V
Sbjct: 273 EEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEV 332

Query: 232 LEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSM 291
           ++A +    M  +G      ++  +++ +C+ G     L  + +    G + + +   ++
Sbjct: 333 VKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEAL 392

Query: 292 IEGLC--KRGS-IKQAFEMLEEMVCQG-WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           +EGLC  + G  + +A +++++ V +  + P+   +  L+  LC+ G  ++A  +  ++V
Sbjct: 393 VEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMV 452

Query: 348 RSENNKPNVLTYTAMINGY 366
             +  KP+  TY A I+GY
Sbjct: 453 -GKGFKPSQETYRAFIDGY 470



 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 153/379 (40%), Gaps = 46/379 (12%)

Query: 333 KGWTEKAFRLFLKLVRSENNKPNVL-TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
           K    +  RL L+L  ++ ++  VL  + ++I  Y      NR           G  P  
Sbjct: 121 KSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSY------NRC----------GSAPFV 164

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
             +  LI     +   + A  +M  +   G +  I T NA++  + ++      YKM ++
Sbjct: 165 --FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYRE 222

Query: 452 GFH-------------NGLEADKVTYNILISEHCKQADIKQALALFSKMAKS-GIQPDIH 497
            F                ++ +  T+N ++    ++ + +    ++ +M +  G  P+++
Sbjct: 223 VFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY 282

Query: 498 SYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
           SY  L+  +C    MSE+E  +EE    G +     Y +MI G C    +  A + F  M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDD- 616
              G     + Y  L++G CK   +D    +Y  M  KG     +T   L    C   D 
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402

Query: 617 ---CCSAMVILDRLEKKLWIRTAT---TLVRKLCSERKVGMAALFFHKLLDMDFHVNRVT 670
                +A ++ D + + ++  +      LV++LC + K+  A     +++   F  ++ T
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQET 462

Query: 671 LAAFMTACYESNKYALVSD 689
             AF+      + Y +V D
Sbjct: 463 YRAFI------DGYGIVGD 475


>AT1G25360.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr1:8894428-8896800 FORWARD
           LENGTH=790
          Length = 790

 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/513 (21%), Positives = 201/513 (39%), Gaps = 112/513 (21%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           G  P    LN ++ + C+   ++YA+ LF+E+S     PD  +   MV  YC  G+    
Sbjct: 44  GFQPRAHILNRLIDVYCKSSELNYARQLFDEIS----EPDKIARTTMVSGYCASGD---- 95

Query: 235 DKWLSVMLDRGF-------LVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLIN 287
                + L RG        + D   +  +I+ F        A+  F K    G KP+   
Sbjct: 96  -----ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFT 150

Query: 288 FTSMIEGLC-----------------KRG--------------------------SIKQA 304
           F S++ GL                  K G                          S ++ 
Sbjct: 151 FASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKV 210

Query: 305 FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN 364
           F+ + E   + W       T ++ G  K G+    F L  +L+   ++   ++ Y AMI+
Sbjct: 211 FDEILEKDERSW-------TTMMTGYVKNGY----FDLGEELLEGMDDNMKLVAYNAMIS 259

Query: 365 GYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDL-MNLMSREGFS 423
           GY        A  ++ RM   G+  +  TY ++I     AG  +    +   ++ RE FS
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS 319

Query: 424 -----------------------------PNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
                                         ++ ++NA++ G    G + EA  + K+   
Sbjct: 320 FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE--- 376

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
              E + +++ I+IS   +    ++ L LFS M + G +P  ++++  I           
Sbjct: 377 -MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
            + +  + ++ GF  +     ++I  Y + G +  A + F  M    C+ DS+++  LI+
Sbjct: 436 GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP---CL-DSVSWNALIA 491

Query: 575 GLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
            L +     EA  +Y+ M++KG+ P  +T +T+
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524



 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 96/448 (21%), Positives = 174/448 (38%), Gaps = 99/448 (22%)

Query: 188 KIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFL 247
           K A    L+  A+ +F+E+    +  D  S+  M+  Y K G     ++ L  M D   L
Sbjct: 196 KCASSPSLLHSARKVFDEI----LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL 251

Query: 248 VDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEM 307
           V   ++  +IS +  +GF   AL    +    G++ +   + S+I   C    + Q  + 
Sbjct: 252 V---AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRA-CATAGLLQLGKQ 307

Query: 308 LEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYC 367
           +   V +    + +   +L+    K G  ++A  +F K+        +++++ A+++GY 
Sbjct: 308 VHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKM-----PAKDLVSWNALLSGYV 362

Query: 368 RDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNIC 427
               +  A+++   MKE+ ++    ++  +I G  + G  E    L + M REGF P  C
Sbjct: 363 SSGHIGEAKLIFKEMKEKNIL----SWMIMISGLAENGFGEEGLKLFSCMKREGFEP--C 416

Query: 428 TYNAIVDGLCKKGRVQEAY--------KMLKDGFHNGLEA-------------------- 459
            Y     G  K   V  AY        ++LK GF + L A                    
Sbjct: 417 DY--AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474

Query: 460 -------DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD----------------- 495
                  D V++N LI+   +     +A+ ++ +M K GI+PD                 
Sbjct: 475 FRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534

Query: 496 -------------------IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
                                 Y  LI + CR  + S++E   E      F PT   + +
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIES---LPFKPTAEIWEA 591

Query: 537 MICGYCREGNLTMAI----KFFHRMSDH 560
           ++ G    GN+ + I    K F  + +H
Sbjct: 592 LLSGCRVHGNMELGIIAADKLFGLIPEH 619



 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/376 (20%), Positives = 145/376 (38%), Gaps = 68/376 (18%)

Query: 126 RLYIVCATSLIGNGNLQKAHEVMQ------------CMVRSFAEIGRLKEAVEMVFEMHN 173
           R +    T  + NG      E+++             M+  +   G  +EA+EMV  M +
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279

Query: 174 QGMVPNTQTLNLVMKIACEMGLV----------------------------------DYA 199
            G+  +  T   V++     GL+                                  D A
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEA 339

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
           + +FE+M A+    D  S+  ++  Y   G++ EA      M ++  L    S+ ++IS 
Sbjct: 340 RAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL----SWMIMISG 391

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
             E GF    L+ F      G +P    F+  I+     G+     +   +++  G+  +
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKP--NVLTYTAMINGYCRDDKLNRAEM 377
           +    ALI    K G  E+A ++F  +       P  + +++ A+I    +      A  
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTM-------PCLDSVSWNALIAALGQHGHGAEAVD 504

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERA---FDLMNLMSREGFSPNICTYNAIVD 434
           +   M ++G+ P+  T  T++     AG  ++    FD M  + R    P    Y  ++D
Sbjct: 505 VYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR--IPPGADHYARLID 562

Query: 435 GLCKKGRVQEAYKMLK 450
            LC+ G+  +A  +++
Sbjct: 563 LLCRSGKFSDAESVIE 578


>AT2G21090.1 | Symbols:  | Pentatricopeptide repeat (PPR-like)
           superfamily protein | chr2:9045695-9047488 REVERSE
           LENGTH=597
          Length = 597

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 207/490 (42%), Gaps = 53/490 (10%)

Query: 96  VASLAGNAGSMVALSFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSF 155
           +ASL    G   +L    W   + +   F R   + +  LIG          M+C     
Sbjct: 49  LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGM--------YMKC----- 95

Query: 156 AEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDS 215
              G+  +A ++  +MH    + N  + N ++    + G++  A+ +F+ M  R    D 
Sbjct: 96  ---GKPIDACKVFDQMH----LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPER----DV 144

Query: 216 ASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH- 274
            S+  MV+ Y + GN+ EA  +       G   +  SF  +++  C K    +  R  H 
Sbjct: 145 VSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTA-CVKSRQLQLNRQAHG 203

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           +    G   N++   S+I+   K G ++ A    +EM  +    +++  T LI G  K G
Sbjct: 204 QVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK----DIHIWTTLISGYAKLG 259

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
             E A +LF      E  + N +++TA+I GY R    NRA  L  +M   G+ P   T+
Sbjct: 260 DMEAAEKLF-----CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK--DG 452
           ++ +       +     ++   M R    PN    ++++D   K G ++ + ++ +  D 
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVF--CREK 510
            H     D V +N +IS   +     +AL +   M K  +QP+    TTL+ +   C   
Sbjct: 375 KH-----DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPN---RTTLVVILNACSHS 426

Query: 511 RMSESEM-FFEE-AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
            + E  + +FE   V+ G +P +  Y  +I    R G      +   ++ +    PD   
Sbjct: 427 GLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK---ELMRKIEEMPFEPDKHI 483

Query: 569 YGTLISGLCK 578
           +  ++ G+C+
Sbjct: 484 WNAIL-GVCR 492



 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/433 (20%), Positives = 178/433 (41%), Gaps = 32/433 (7%)

Query: 257 ISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW 316
           +S+   K   ++A+      +  G++       S+++      S+KQ   +   +   G+
Sbjct: 18  LSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGF 77

Query: 317 K-PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA 375
           K PN      LI    K G    A ++F ++     +  N+ ++  M++GY +   L RA
Sbjct: 78  KRPNTLLSNHLIGMYMKCGKPIDACKVFDQM-----HLRNLYSWNNMVSGYVKSGMLVRA 132

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
            ++   M E+ ++    ++ T++ G+ + GN   A        R G   N  ++  ++  
Sbjct: 133 RVVFDSMPERDVV----SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTA 188

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
             K  ++Q   +        G  ++ V    +I  + K   ++ A   F +M       D
Sbjct: 189 CVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK----D 244

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR--TYTSMICGYCREGNLTMAIKF 553
           IH +TTLI+ + +   M  +E  F E      +P K   ++T++I GY R+G+   A+  
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCE------MPEKNPVSWTALIAGYVRQGSGNRALDL 298

Query: 554 FHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCK 613
           F +M   G  P+   + + +      + L   + ++  MI   + P  +   +L   Y K
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358

Query: 614 IDDCCSAMVIL----DRLEKKLWIRTATTLVRKLCSERKVGMAAL-FFHKLLDMDFHVNR 668
                ++  +     D+ +   W     T++  L ++  +G  AL     ++      NR
Sbjct: 359 SGSLEASERVFRICDDKHDCVFW----NTMISAL-AQHGLGHKALRMLDDMIKFRVQPNR 413

Query: 669 VTLAAFMTACYES 681
            TL   + AC  S
Sbjct: 414 TTLVVILNACSHS 426


>AT5G02830.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:644458-648421 REVERSE
           LENGTH=852
          Length = 852

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 171/414 (41%), Gaps = 33/414 (7%)

Query: 170 EMHNQGMVPNTQTLNLVMKI-ACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKM 228
           ++  + + PN   +N +M + + ++G   Y   +++ M    V  D  SY +++   C  
Sbjct: 292 DLLKENIKPNIYVINSLMNVNSHDLG---YTLKVYKNMQILDVTADMTSYNILLKTCCLA 348

Query: 229 GNV-LEAD--KWLSVMLDRGFL-VDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPN 284
           G V L  D  K    M   G L +D  ++  II  F +      AL+       +G+ PN
Sbjct: 349 GRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPN 408

Query: 285 LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 344
              ++S+I      G ++QA  + EEM+  G +PN      L+    +    ++AFRLF 
Sbjct: 409 THTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQ 468

Query: 345 KLVRSENNK---------------PNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
               S  N+               PN+L      NG       N     +   K     P
Sbjct: 469 SWKGSSVNESLYADDIVSKGRTSSPNILKN----NGPGSLVNRNSNSPYIQASKRFCFKP 524

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
            T TY  L+   C   ++ R  +LM+ M   G SPN  T++ ++D     G V+ A ++L
Sbjct: 525 TTATYNILLKA-C-GTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRIL 582

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
           +     G   D V Y   I    +   +K A +LF +M +  I+P+  +Y TL+    + 
Sbjct: 583 RTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKY 642

Query: 510 KRMSESEM---FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDH 560
             + E       +++    G+ P       +I  +C EG +    +   ++SD 
Sbjct: 643 GSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWC-EGVIQENGQSQDKISDQ 695



 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 112/553 (20%), Positives = 216/553 (39%), Gaps = 84/553 (15%)

Query: 125 MRLYIVCATSLIGNGNLQKAHEVMQCMV-RSFAEIGRLKEAVEMVFEMHNQGMVPNTQTL 183
           +  Y   A+ L  +G ++    + + +   S A + R    V+  +++ ++G+  N +  
Sbjct: 81  LEYYADFASKLAEDGRIEDVALIAETLAAESGANVARFASMVD--YDLLSKGISSNLR-- 136

Query: 184 NLVMKIACEMGLVDYAQYLFEEMSARGVHP----DSASYRVMVVAYCKMGNVLEADKWLS 239
                     G ++   Y  + +   G+ P    D +S ++M   +  M N ++ +K + 
Sbjct: 137 ---------QGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMANSVQVEKAID 187

Query: 240 VM---LDRGF----LVD------------NASFTL---------------IISEFCEKGF 265
           +M      GF    LVD            N    +               II  F +KG 
Sbjct: 188 LMEILAGLGFKIKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFGKKGD 247

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIE--GLCKRGSIKQAFEMLEEMVCQGWKPNVYTH 323
               +  +     +   PN+    +MI+  GLC  G   ++  + E+++ +  KPN+Y  
Sbjct: 248 MVSVMTAYEACKQILDTPNMYICRTMIDVCGLC--GDYVKSRYIYEDLLKENIKPNIYVI 305

Query: 324 TALIDGLCKK-GWTEKAFRLFLKL-VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
            +L++      G+T K ++    L V ++    N+L  T  + G  R D          R
Sbjct: 306 NSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAG--RVDLAQDIYKEAKR 363

Query: 382 MKEQGLIP-NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKG 440
           M+  GL+  +  TY T+I     A  ++ A  + + M   G +PN  T+++++      G
Sbjct: 364 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 423

Query: 441 RVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYT 500
            V++A  + ++   +G E +   +NIL+    +     +A  LF     S +   +++  
Sbjct: 424 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD 483

Query: 501 TLIAVFCREKRM------------SESEMFFEEAVRFGFIPTKRTYTSMI--CG--YCRE 544
            +         +            + +  + + + RF F PT  TY  ++  CG  Y R 
Sbjct: 484 IVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRG 543

Query: 545 GNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTR 604
             L         M   G  P+ I + TLI        ++ A  +  +M   G  P +V  
Sbjct: 544 KEL------MDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRP-DVVA 596

Query: 605 ITLAYEYCKIDDC 617
            T A + C  + C
Sbjct: 597 YTTAIKICAENKC 609



 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/440 (20%), Positives = 168/440 (38%), Gaps = 65/440 (14%)

Query: 197 DY--AQYLFEEMSARGVHPD-SASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASF 253
           DY  ++Y++E++    + P+      +M V    +G  L+  K + ++       D  S+
Sbjct: 282 DYVKSRYIYEDLLKENIKPNIYVINSLMNVNSHDLGYTLKVYKNMQIL---DVTADMTSY 338

Query: 254 TLIISEFCEKGFATRALRYFHKFSDMG----LKPNLINFTSMIEGLCKRGSIKQAFEMLE 309
            +++   C  G    A   + +   M     LK +   + ++I+        K A ++ +
Sbjct: 339 NILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKD 398

Query: 310 EMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRD 369
           +M   G  PN +T ++LI      G  E+A  LF +++ S   +PN   +  +++     
Sbjct: 399 DMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLAS-GCEPNSQCFNILLHACVEA 457

Query: 370 DKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG-------- 421
            + +RA  L    K   +  +      +  G   + N  +     +L++R          
Sbjct: 458 CQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQAS 517

Query: 422 ----FSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHN-GLEADKVTYNILISEHCKQAD 476
               F P   TYN ++      G      K L D   + GL  +++T++ LI       D
Sbjct: 518 KRFCFKPTTATYNILLKAC---GTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGD 574

Query: 477 IKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTS 536
           ++ A+ +   M  +G +PD+ +YTT I + C E +                         
Sbjct: 575 VEGAVRILRTMHSAGTRPDVVAYTTAIKI-CAENK------------------------- 608

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR---GLYDSMI 593
                C    L +A   F  M  +   P+ + Y TL+    K   L E R    +Y  M 
Sbjct: 609 -----C----LKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMR 659

Query: 594 EKGLIPCEVTRITLAYEYCK 613
             G  P +     L  E+C+
Sbjct: 660 NAGYKPNDHFLKELIEEWCE 679



 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 128/317 (40%), Gaps = 42/317 (13%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++ + A  G +++A  +  EM   G  PN+Q  N+++    E    D A  LF+      
Sbjct: 415 LISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSS 474

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           V+    +  ++        N+L+ +   S +++R     N+ +      FC         
Sbjct: 475 VNESLYADDIVSKGRTSSPNILKNNGPGS-LVNRN---SNSPYIQASKRFC--------- 521

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
                      KP    +  +++  C     +   E+++EM   G  PN  T + LID  
Sbjct: 522 ----------FKPTTATYNILLKA-CGTDYYR-GKELMDEMKSLGLSPNQITWSTLIDMC 569

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK-LNRAEMLLGRMKEQGLIP 389
              G  E A R+ L+ + S   +P+V+ YT  I   C ++K L  A  L   M+   + P
Sbjct: 570 GGSGDVEGAVRI-LRTMHSAGTRPDVVAYTTAIK-ICAENKCLKLAFSLFEEMRRYQIKP 627

Query: 390 NTNTYTTLIDGHCKAGNF---ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAY 446
           N  TY TL+    K G+     +   +   M   G+ PN      +++  C +G +QE  
Sbjct: 628 NWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWC-EGVIQE-- 684

Query: 447 KMLKDGFHNGLEADKVT 463
                   NG   DK++
Sbjct: 685 --------NGQSQDKIS 693


>AT3G02010.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:337965-340442 FORWARD
           LENGTH=825
          Length = 825

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/495 (21%), Positives = 204/495 (41%), Gaps = 39/495 (7%)

Query: 142 QKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA-- 199
           +K       ++  + + G   E++ +  +M   G  P+  T + V+K    +GL D+A  
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFALG 269

Query: 200 QYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
           Q L       G   D++    ++  Y K   VLE      ++ D    +D  S+ ++IS 
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLET----RMLFDEMPELDFVSYNVVISS 325

Query: 260 FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN 319
           + +      +L +F +   MG       F +M+       S++   ++  + +       
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385

Query: 320 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLL 379
           ++   +L+D   K    E+A  +F  L +        +++TA+I+GY +         L 
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQR-----TTVSWTALISGYVQKGLHGAGLKLF 440

Query: 380 GRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKK 439
            +M+   L  + +T+ T++       +      L   + R G   N+ + + +VD   K 
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC 500

Query: 440 GRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
           G +++A ++    F    + + V++N LIS H    D + A+  F+KM +SG+QPD  S 
Sbjct: 501 GSIKDAVQV----FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556

Query: 500 TTLIAVFCREKRMSE--SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
             ++   C      E  +E F   +  +G  P K+ Y  M+    R G    A K    M
Sbjct: 557 LGVLTA-CSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAY-------- 609
                 PD I + ++++      ++ + + L +   EK L   E  R   AY        
Sbjct: 616 PFE---PDEIMWSSVLNAC----RIHKNQSLAERAAEK-LFSMEKLRDAAAYVSMSNIYA 667

Query: 610 ---EYCKIDDCCSAM 621
              E+ K+ D   AM
Sbjct: 668 AAGEWEKVRDVKKAM 682



 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 114/590 (19%), Positives = 231/590 (39%), Gaps = 63/590 (10%)

Query: 125 MRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLN 184
           M+LY  C ++ + +  L    ++ Q    +F +  R+   +         G   +T   N
Sbjct: 1   MKLY--CNSNEVRSRTLATLRQLRQPSPATFLDTRRVDARI------IKTGFDTDTCRSN 52

Query: 185 LVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDR 244
            +++     G V  A+ +++EM     H ++ S   M+  + K G+V  A      M DR
Sbjct: 53  FIVEDLLRRGQVSAARKVYDEMP----HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDR 108

Query: 245 GFLVDNASFTLIISEFCEKGFATRALRYFHKF--SDMGLKPNLINFTSMIEGLCKRGSIK 302
             +    ++T+++  +        A + F +   S     P+ + FT+++ G C     +
Sbjct: 109 TVV----TWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPG-CNDAVPQ 163

Query: 303 QAFEMLEEMVCQ-GWKPNVY--THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
            A   +     + G+  N +      L+   C+    + A  LF ++   ++     +T+
Sbjct: 164 NAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDS-----VTF 218

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
             +I GY +D     +  L  +M++ G  P+  T++ ++       +F     L  L   
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQ 479
            GFS +    N I+D   K  RV E  +ML   F    E D V+YN++IS + +    + 
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLET-RML---FDEMPELDFVSYNVVISSYSQADQYEA 334

Query: 480 ALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM--------------------------- 512
           +L  F +M   G       + T++++      +                           
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVD 394

Query: 513 --SESEMFFEEAVRFGFIPTKRT--YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIA 568
             ++ EMF E  + F  +P + T  +T++I GY ++G     +K F +M       D   
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454

Query: 569 YGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLE 628
           + T++      + L   + L+  +I  G +    +   L   Y K      A+ + + + 
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514

Query: 629 KKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFMTAC 678
            +  + +   L+           A   F K+++     + V++   +TAC
Sbjct: 515 DRNAV-SWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC 563



 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 95/475 (20%), Positives = 184/475 (38%), Gaps = 44/475 (9%)

Query: 241 MLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGS 300
           ++  GF  D      I+ +   +G  + A + + +        N ++  +MI G  K G 
Sbjct: 39  IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMP----HKNTVSTNTMISGHVKTGD 94

Query: 301 IKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSEN-NKPNVLTY 359
           +  A ++ + M  +     V T T L+    +    ++AF+LF ++ RS +   P+ +T+
Sbjct: 95  VSSARDLFDAMPDR----TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQG--LIPNTNTYTT----LIDGHCKAGNFERAFDL 413
           T ++ G C D     A   +G++      L  +TN + T    L+  +C+     R  DL
Sbjct: 151 TTLLPG-CNDAVPQNA---VGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV----RRLDL 202

Query: 414 MNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCK 473
             ++  E    +  T+N ++ G  K G   E+  +      +G +    T++ ++     
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262

Query: 474 QADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRT 533
             D      L +    +G   D      ++  + +  R+ E+ M F+E     F+    +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV----S 318

Query: 534 YTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLY---- 589
           Y  +I  Y +      ++ FF  M   G    +  + T++S     S L   R L+    
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378

Query: 590 ----DSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCS 645
               DS++  G         +L   Y K +    A +I   L ++  + + T L+     
Sbjct: 379 LATADSILHVG--------NSLVDMYAKCEMFEEAELIFKSLPQRTTV-SWTALISGYVQ 429

Query: 646 ERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYESNKYALVSDLSARIYKDNRL 700
           +   G     F K+   +   ++ T A  + A        L   L A I +   L
Sbjct: 430 KGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484


>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:2514374-2516599 REVERSE
           LENGTH=741
          Length = 741

 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/420 (21%), Positives = 171/420 (40%), Gaps = 56/420 (13%)

Query: 213 PDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRY 272
           P+   +  M   +    + + A K    M+  G L ++ +F  ++   C K  A +  + 
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS-CAKSKAFKEGQQ 155

Query: 273 FHKFS-DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLC 331
            H     +G   +L   TS+I    + G ++ A ++ ++   +    +V ++TALI G  
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYA 211

Query: 332 KKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNT 391
            +G+ E A +LF      E    +V+++ AMI+GY        A  L   M +  + P+ 
Sbjct: 212 SRGYIENAQKLF-----DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266

Query: 392 NTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKD 451
           +T  T++    ++G+ E    +   +   GF  N+   NA++D   K G ++ A  +   
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL--- 323

Query: 452 GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD---------------- 495
            F      D +++N LI  +      K+AL LF +M +SG  P+                
Sbjct: 324 -FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382

Query: 496 ------IHSY---------------TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY 534
                 IH Y               T+LI ++ +   +  +   F   +      +  ++
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH----KSLSSW 438

Query: 535 TSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
            +MI G+   G    +   F RM   G  PD I +  L+S       LD  R ++ +M +
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498



 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 183/445 (41%), Gaps = 35/445 (7%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           +   M R  A       A+++   M + G++PN+ T   V+K   +       Q +   +
Sbjct: 101 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHV 160

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
              G   D   +  ++  Y + G + +A K    + D+    D  S+T +I  +  +G+ 
Sbjct: 161 LKLGCDLDLYVHTSLISMYVQNGRLEDAHK----VFDKSPHRDVVSYTALIKGYASRGYI 216

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
             A +    F ++ +K +++++ +MI G  + G+ K+A E+ ++M+    +P+  T   +
Sbjct: 217 ENAQKL---FDEIPVK-DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           +    + G  E   ++ L  +       N+    A+I+ Y +  +L  A  L  R+  + 
Sbjct: 273 VSACAQSGSIELGRQVHL-WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 331

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVD-----GLCKKGR 441
           +I    ++ TLI G+     ++ A  L   M R G +PN  T  +I+      G    GR
Sbjct: 332 VI----SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387

Query: 442 VQEAY--KMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSY 499
               Y  K LK     G+         LI  + K  DI+ A  +F+ +    +   + S+
Sbjct: 388 WIHVYIDKRLK-----GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI----LHKSLSSW 438

Query: 500 TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMS- 558
             +I  F    R   S   F    + G  P   T+  ++      G L +    F  M+ 
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498

Query: 559 DHGCVPDSIAYGTLI-----SGLCK 578
           D+   P    YG +I     SGL K
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFK 523



 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/398 (21%), Positives = 157/398 (39%), Gaps = 59/398 (14%)

Query: 241 MLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGS 300
           M+  G    N + + +I EFC        L Y         +PNL+ + +M  G      
Sbjct: 56  MIKIGLHNTNYALSKLI-EFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSD 114

Query: 301 IKQAFEMLEEMVCQGWKPNVYT-----------------------------------HTA 325
              A ++   M+  G  PN YT                                   HT+
Sbjct: 115 PVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 174

Query: 326 LIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQ 385
           LI    + G  E A ++F K     +   +V++YTA+I GY     +  A+ L   +  +
Sbjct: 175 LISMYVQNGRLEDAHKVFDK-----SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229

Query: 386 GLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ-- 443
            ++    ++  +I G+ + GN++ A +L   M +    P+  T   +V    + G ++  
Sbjct: 230 DVV----SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285

Query: 444 -EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
            + +  + D   +G  ++    N LI  + K  +++ A  LF ++       D+ S+ TL
Sbjct: 286 RQVHLWIDD---HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTL 338

Query: 503 IAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSD--- 559
           I  +       E+ + F+E +R G  P   T  S++      G + +  ++ H   D   
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG-RWIHVYIDKRL 397

Query: 560 HGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGL 597
            G    S    +LI    K   ++ A  +++S++ K L
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435



 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/283 (20%), Positives = 117/283 (41%), Gaps = 31/283 (10%)

Query: 352 NKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAF 411
            +PN+L +  M  G+        A  L   M   GL+PN+ T+  ++    K+  F+   
Sbjct: 95  QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154

Query: 412 DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEA------------ 459
            +   + + G   ++  + +++    + GR+++A+K+     H  + +            
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214

Query: 460 ---------------DKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
                          D V++N +IS + +  + K+AL LF  M K+ ++PD  +  T+++
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
              +   +             GF    +   ++I  Y + G L  A   F R+       
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP----YK 330

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           D I++ TLI G    +   EA  L+  M+  G  P +VT +++
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373



 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/389 (20%), Positives = 155/389 (39%), Gaps = 66/389 (16%)

Query: 133 TSLIG----NGNLQKAHEVMQ-----------CMVRSFAEIGRLKEAVEMVFEMHNQGMV 177
           TSLI     NG L+ AH+V              +++ +A  G ++ A ++  E+     V
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI----PV 228

Query: 178 PNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKW 237
            +  + N ++    E G    A  LF++M    V PD ++  V VV+ C     +E  + 
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM-VTVVSACAQSGSIELGRQ 287

Query: 238 LSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCK 297
           + + +D                                  D G   NL    ++I+   K
Sbjct: 288 VHLWID----------------------------------DHGFGSNLKIVNALIDLYSK 313

Query: 298 RGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVL 357
            G ++ A  + E +  +    +V +   LI G       ++A  LF +++RS    PN +
Sbjct: 314 CGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRS-GETPNDV 368

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKE--QGLIPNTNTYTTLIDGHCKAGNFERAFDLMN 415
           T  +++        ++    +   + +  +G+   ++  T+LID + K G+ E A  + N
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428

Query: 416 LMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQA 475
            +  +  S    ++NA++ G    GR   ++ +       G++ D +T+  L+S      
Sbjct: 429 SILHKSLS----SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSG 484

Query: 476 DIKQALALFSKMAKS-GIQPDIHSYTTLI 503
            +     +F  M +   + P +  Y  +I
Sbjct: 485 MLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513


>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
           repeat (TPR)-like superfamily protein |
           chr1:5329111-5331711 FORWARD LENGTH=866
          Length = 866

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/434 (22%), Positives = 184/434 (42%), Gaps = 20/434 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEM-GLVDYAQYLFEEMSAR 209
           M+  + E G   E +E+ F M    + P+  TL  V+  ACE+ G     + +   +   
Sbjct: 268 MISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS-ACELLGDRRLGRDIHAYVITT 326

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           G   D +    +   Y   G+  EA+K  S M  +    D  S+T +IS +       +A
Sbjct: 327 GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK----DIVSWTTMISGYEYNFLPDKA 382

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           +  +       +KP+ I   +++      G +    E+ +  +       V     LI+ 
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
             K    +KA  +F  + R      NV+++T++I G   +++   A + L +MK   L P
Sbjct: 443 YSKCKCIDKALDIFHNIPRK-----NVISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQP 496

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           N  T T  +    + G      ++   + R G   +    NA++D   + GR+  A+   
Sbjct: 497 NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF 556

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
                N  + D  ++NIL++ + ++      + LF +M KS ++PD  ++ +L+    + 
Sbjct: 557 -----NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKS 611

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
           + + +  M+F +   +G  P  + Y  ++    R G L  A KF  +M      PD   +
Sbjct: 612 QMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP---VTPDPAVW 668

Query: 570 GTLISGLCKQSKLD 583
           G L++      K+D
Sbjct: 669 GALLNACRIHHKID 682



 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 103/505 (20%), Positives = 206/505 (40%), Gaps = 35/505 (6%)

Query: 104 GSMVALSFFHWAI---GYSRFRHF---MRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAE 157
           G M   + F W +   GY++  +F   M LY      ++  G ++       C++R+   
Sbjct: 153 GKMSERNLFSWNVLVGGYAKQGYFDEAMCLY----HRMLWVGGVKPDVYTFPCVLRTCGG 208

Query: 158 IGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSAS 217
           I  L    E+   +   G   +   +N ++ +  + G V  A+ LF+ M  R    D  S
Sbjct: 209 IPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR----DIIS 264

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTL--IISEFCEKGFATRALRYFHK 275
           +  M+  Y + G   E  +    M  RG  VD    TL  +IS  CE     R  R  H 
Sbjct: 265 WNAMISGYFENGMCHEGLELFFAM--RGLSVDPDLMTLTSVISA-CELLGDRRLGRDIHA 321

Query: 276 FS-DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           +    G   ++    S+ +     GS ++A ++   M     + ++ + T +I G     
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME----RKDIVSWTTMISGYEYNF 377

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
             +KA   + +++  ++ KP+ +T  A+++       L+    L     +  LI      
Sbjct: 378 LPDKAIDTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
             LI+ + K    ++A D+ + + R+    N+ ++ +I+ GL    R  EA   L+    
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRK----NVISWTSIIAGLRLNNRCFEALIFLRQ-MK 491

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
             L+ + +T    ++   +   +     + + + ++G+  D      L+ ++ R  RM+ 
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
           +   F    +        ++  ++ GY   G  +M ++ F RM      PD I + +L+ 
Sbjct: 552 AWSQFNSQKK-----DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLC 606

Query: 575 GLCKQSKLDEARGLYDSMIEKGLIP 599
           G  K   + +    +  M + G+ P
Sbjct: 607 GCSKSQMVRQGLMYFSKMEDYGVTP 631



 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 88/458 (19%), Positives = 185/458 (40%), Gaps = 20/458 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMV-PNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
           +V  +A+ G   EA+ +   M   G V P+  T   V++    +  +   + +   +   
Sbjct: 166 LVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRY 225

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           G   D      ++  Y K G+V  A     ++ DR    D  S+  +IS + E G     
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSA----RLLFDRMPRRDIISWNAMISGYFENGMCHEG 281

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           L  F     + + P+L+  TS+I      G  +   ++   ++  G+  ++    +L   
Sbjct: 282 LELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQM 341

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
               G   +A +LF ++ R +     ++++T MI+GY  +   ++A      M +  + P
Sbjct: 342 YLNAGSWREAEKLFSRMERKD-----IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           +  T   ++      G+ +   +L  L  +      +   N +++   K   + +A    
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL--- 453

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
            D FHN    + +++  +I+         +AL +F +  K  +QP+  + T  +A   R 
Sbjct: 454 -DIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARI 511

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
             +   +      +R G         +++  Y R G +  A   F+         D  ++
Sbjct: 512 GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-----KDVTSW 566

Query: 570 GTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
             L++G  ++ +      L+D M++  + P E+T I+L
Sbjct: 567 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL 604



 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 85/416 (20%), Positives = 161/416 (38%), Gaps = 34/416 (8%)

Query: 226 CKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNL 285
           C  G + EA K L+ M +    VD   F  ++   CE          + +  + G K   
Sbjct: 70  CANGKLEEAMKLLNSMQELRVAVDEDVFVALV-RLCE----------WKRAQEEGSKVYS 118

Query: 286 INFTSM-----------IEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           I  +SM           +    + G++  A+ +  +M     + N+++   L+ G  K+G
Sbjct: 119 IALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMS----ERNLFSWNVLVGGYAKQG 174

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
           + ++A  L+ +++     KP+V T+  ++        L R + +   +   G   + +  
Sbjct: 175 YFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV 234

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
             LI  + K G+ + A  L + M R     +I ++NA++ G  + G   E  ++      
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRR----DIISWNAMISGYFENGMCHEGLELFFAMRG 290

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSE 514
             ++ D +T   +IS      D +    + + +  +G   DI    +L  ++       E
Sbjct: 291 LSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWRE 350

Query: 515 SEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLIS 574
           +E  F    R   +    ++T+MI GY        AI  +  M      PD I    ++S
Sbjct: 351 AEKLFSRMERKDIV----SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLS 406

Query: 575 GLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK 630
                  LD    L+   I+  LI   +    L   Y K      A+ I   + +K
Sbjct: 407 ACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462



 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/231 (19%), Positives = 99/231 (42%), Gaps = 9/231 (3%)

Query: 363 INGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGF 422
           ++G C + KL  A  LL  M+E  +  + + +  L+         E    + ++      
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125

Query: 423 SPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALA 482
           S  +   NA +    + G + +A+ +    F    E +  ++N+L+  + KQ    +A+ 
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYV----FGKMSERNLFSWNVLVGGYAKQGYFDEAMC 181

Query: 483 LFSKMAK-SGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGY 541
           L+ +M    G++PD++++  ++        ++  +      VR+G+        ++I  Y
Sbjct: 182 LYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
            + G++  A   F RM       D I++  +ISG  +     E   L+ +M
Sbjct: 242 VKCGDVKSARLLFDRMPRR----DIISWNAMISGYFENGMCHEGLELFFAM 288


>AT1G09190.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:2966263-2967717 REVERSE
           LENGTH=484
          Length = 484

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 173/410 (42%), Gaps = 59/410 (14%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   M++ ++ +G   E++     M ++G+  +  T   ++K    +  + + + +  E+
Sbjct: 69  VFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGEL 128

Query: 207 SARGVHPDSASYRVMVVA-YCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGF 265
              G H      R+ VV  Y   G + +A K    M +R  +V N    L+I  FC+ G 
Sbjct: 129 IRTGFHR-LGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN----LMIRGFCDSGD 183

Query: 266 ATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPN------ 319
             R L  F + S+     +++++ SMI  L K G  ++A E+  EM+ QG+ P+      
Sbjct: 184 VERGLHLFKQMSER----SIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVT 239

Query: 320 ------------------------------VYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
                                         +    AL+D  CK G  E A  +F K+ R 
Sbjct: 240 VLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR 299

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLI-PNTNTYTTLIDGHCKAGNFE 408
                NV+++  +I+G   + K      L   M E+G + PN  T+  ++      G  E
Sbjct: 300 -----NVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVE 354

Query: 409 RAFDLMNL-MSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           R  +L  L M R         Y A+VD + + GR+ EA+K LK+   N   A+   +  L
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVN---ANAAMWGSL 411

Query: 468 ISEHCKQADIKQALALFSKMAKSGIQP-DIHSYTTLIAVFCREKRMSESE 516
           +S      D+K  LA  + M    I+P +  +Y  L  ++  E R  + E
Sbjct: 412 LSACRSHGDVK--LAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVE 459



 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/416 (21%), Positives = 166/416 (39%), Gaps = 47/416 (11%)

Query: 197 DYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLI 256
           DYA  +F  +     +P+   +  M+  Y  +G  LE+  + S M  RG   D  ++  +
Sbjct: 53  DYANRVFSHIQ----NPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPL 108

Query: 257 ISE----------FCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFE 306
           +             C  G   R    FH+   + +         ++E     G +  A +
Sbjct: 109 LKSCSSLSDLRFGKCVHGELIRT--GFHRLGKIRI--------GVVELYTSGGRMGDAQK 158

Query: 307 MLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY 366
           + +EM     + NV     +I G C  G  E+   LF ++     ++ +++++ +MI+  
Sbjct: 159 VFDEMS----ERNVVVWNLMIRGFCDSGDVERGLHLFKQM-----SERSIVSWNSMISSL 209

Query: 367 CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREG-FSPN 425
            +  +   A  L   M +QG  P+  T  T++      G  +    + +     G F   
Sbjct: 210 SKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDF 269

Query: 426 ICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFS 485
           I   NA+VD  CK G ++ A  +    F      + V++N LIS        +  + LF 
Sbjct: 270 ITVGNALVDFYCKSGDLEAATAI----FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFD 325

Query: 486 KMAKSG-IQPDIHSYTTLIAVFCREKRMSESEMFFEEAV-RFGFIPTKRTYTSMICGYCR 543
            M + G + P+  ++  ++A      ++   E  F   + RF        Y +M+    R
Sbjct: 326 AMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSR 385

Query: 544 EGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQS---KLDEARGLYDSMIEKG 596
            G +T A KF   M  +    ++  +G+L+S  C+     KL E   +    IE G
Sbjct: 386 SGRITEAFKFLKNMPVNA---NAAMWGSLLSA-CRSHGDVKLAEVAAMELVKIEPG 437



 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 143/383 (37%), Gaps = 76/383 (19%)

Query: 347 VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLID------- 399
           V S    PNVL + AMI  Y        +      MK +G+  +  TY  L+        
Sbjct: 58  VFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSD 117

Query: 400 ---GHC----------------------------KAGNFERAFDLMNLMSREGFSPNICT 428
              G C                            + G+ ++ FD M+         N+  
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMS-------ERNVVV 170

Query: 429 YNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           +N ++ G C  G V+    +    F    E   V++N +IS   K    ++AL LF +M 
Sbjct: 171 WNLMIRGFCDSGDVERGLHL----FKQMSERSIVSWNSMISSLSKCGRDREALELFCEMI 226

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTY-TSMICGYCREGNL 547
             G  PD  +  T++ +      +   +     A   G      T   +++  YC+ G+L
Sbjct: 227 DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDL 286

Query: 548 TMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLI-PCEVTRIT 606
             A   F +M     V    ++ TLISG     K +    L+D+MIE+G + P E T   
Sbjct: 287 EAATAIFRKMQRRNVV----SWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEAT--- 339

Query: 607 LAYEYCKIDDCCSAMVILDRLEK---------KLWIRTA--TTLVRKLCSERKVGMAALF 655
               +  +  CCS    ++R E+         KL  RT     +V  +    ++  A   
Sbjct: 340 ----FLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEA--- 392

Query: 656 FHKLLDMDFHVNRVTLAAFMTAC 678
           F  L +M  + N     + ++AC
Sbjct: 393 FKFLKNMPVNANAAMWGSLLSAC 415


>AT1G56570.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:21195804-21197721 FORWARD
           LENGTH=611
          Length = 611

 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 115/511 (22%), Positives = 210/511 (41%), Gaps = 91/511 (17%)

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           ++V+Y + G V EA      M DR    D  ++T +I+ +    +  RA   FH+    G
Sbjct: 51  LIVSYFEKGLVEEARSLFDEMPDR----DVVAWTAMITGYASSNYNARAWECFHEMVKQG 106

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ-GWKPNVYTHTALIDGLCKKGWTEKA 339
             PN    +S+++  C+   +     ++  +V + G + ++Y   A+++       T +A
Sbjct: 107 TSPNEFTLSSVLKS-CRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165

Query: 340 FRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLG-RMKEQGLIPNTNT----Y 394
             L  + ++ +N+    +T+T +I G+      +  + + G +M +Q L+ N        
Sbjct: 166 ACLIFRDIKVKND----VTWTTLITGFT-----HLGDGIGGLKMYKQMLLENAEVTPYCI 216

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFH 454
           T  +       +      +   + + GF  N+   N+I+D  C+ G + EA    K  FH
Sbjct: 217 TIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEA----KHYFH 272

Query: 455 NGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA---------- 504
              + D +T+N LISE  +++D  +AL +F +    G  P+ +++T+L+A          
Sbjct: 273 EMEDKDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNC 331

Query: 505 -------VFCR--EKRMSESEMFFEEAVRFGFIPTKR-------------TYTSMICGYC 542
                  +F R   K +  +    +   + G IP  +             ++TSM+ GY 
Sbjct: 332 GQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391

Query: 543 REGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEV 602
             G    A++ F +M   G  PD I +  ++S  C+ + L          +EKGL    V
Sbjct: 392 SHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSA-CRHAGL----------VEKGLKYFNV 440

Query: 603 TRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDM 662
               +  EY    D      ++D L +   I  A  LV +                   M
Sbjct: 441 ----MESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVER-------------------M 477

Query: 663 DFHVNRVTLAAFMTACYESNKYALVSDLSAR 693
            F  +  T  A + AC       L+S L+AR
Sbjct: 478 PFKPDESTWGAILGACKAHKHNGLISRLAAR 508



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/431 (21%), Positives = 179/431 (41%), Gaps = 54/431 (12%)

Query: 150 CMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSAR 209
            M+  +A       A E   EM  QG  PN  TL+ V+K    M ++ Y   +   +   
Sbjct: 81  AMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKL 140

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDN-ASFTLIISEFCEKGFATR 268
           G+         M+  Y      +EA    + ++ R   V N  ++T +I+ F   G    
Sbjct: 141 GMEGSLYVDNAMMNMYATCSVTMEA----ACLIFRDIKVKNDVTWTTLITGFTHLGDGIG 196

Query: 269 ALRYFHK--FSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
            L+ + +    +  + P  I  T  +       S+    ++   ++ +G++ N+    ++
Sbjct: 197 GLKMYKQMLLENAEVTPYCI--TIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSI 254

Query: 327 IDGLCKKGWTEKAFRLF---------------LKLVRSENNK--------------PNVL 357
           +D  C+ G+  +A   F                +L RS++++              PN  
Sbjct: 255 LDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCY 314

Query: 358 TYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF---ERAFDLM 414
           T+T+++        LN  + L GR+  +G   N      LID + K GN    +R F   
Sbjct: 315 TFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFG-- 372

Query: 415 NLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQ 474
            ++ R     N+ ++ +++ G    G   EA ++      +G+  D++ +  ++S  C+ 
Sbjct: 373 EIVDRR----NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSA-CRH 427

Query: 475 AD-IKQALALFSKM-AKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           A  +++ L  F+ M ++ GI PD   Y  ++ +  R  ++ E+   +E   R  F P + 
Sbjct: 428 AGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEA---YELVERMPFKPDES 484

Query: 533 TYTSMICGYCR 543
           T+ + I G C+
Sbjct: 485 TWGA-ILGACK 494



 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 15/273 (5%)

Query: 133 TSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVP-NTQTLNLVMKIAC 191
            S+I  G  Q    VM  ++  +   G L EA     EM ++ ++  NT    L    + 
Sbjct: 237 ASVIKRG-FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSS 295

Query: 192 EMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNA 251
           E      A  +F+   ++G  P+  ++  +V A   +  +    +    +  RGF  +  
Sbjct: 296 E------ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVE 349

Query: 252 SFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEM 311
               +I  + + G    + R F +  D   + NL+++TSM+ G    G   +A E+ ++M
Sbjct: 350 LANALIDMYAKCGNIPDSQRVFGEIVD---RRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406

Query: 312 VCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDK 371
           V  G +P+     A++      G  EK  + F  +       P+   Y  +++   R  K
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466

Query: 372 LNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKA 404
           +  A  L+ RM  +   P+ +T+  ++ G CKA
Sbjct: 467 IGEAYELVERMPFK---PDESTWGAIL-GACKA 495



 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 13/276 (4%)

Query: 324 TALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMK 383
           T LI    +KG  E+A  LF      E    +V+ +TAMI GY   +   RA      M 
Sbjct: 49  TNLIVSYFEKGLVEEARSLF-----DEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103

Query: 384 EQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQ 443
           +QG  PN  T ++++              +  ++ + G   ++   NA+++         
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
           EA  ++   F +    + VT+  LI+      D    L ++ +M     +   +  T  +
Sbjct: 164 EAACLI---FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
                   ++  +      ++ GF        S++  YCR G L+ A  +FH M D    
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK--- 277

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            D I + TLIS L ++S   EA  ++     +G +P
Sbjct: 278 -DLITWNTLISEL-ERSDSSEALLMFQRFESQGFVP 311


>AT3G08820.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:2677122-2679179 REVERSE
           LENGTH=685
          Length = 685

 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/437 (21%), Positives = 179/437 (40%), Gaps = 19/437 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++  F       E +++   +   G+  +  T  LV+K             L   +   G
Sbjct: 82  LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
            + D A+   ++  Y   G + +A K    + DR  +    ++T + S +   G    A+
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVV----TWTALFSGYTTSGRHREAI 197

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F K  +MG+KP+      ++      G +     +++ M     + N +  T L++  
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLY 257

Query: 331 CKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPN 390
            K G  EKA  +F  +V     + +++T++ MI GY  +        L  +M ++ L P+
Sbjct: 258 AKCGKMEKARSVFDSMV-----EKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312

Query: 391 TNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
             +    +      G  +     ++L+ R  F  N+   NA++D   K G +   +++ K
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
           +      E D V  N  IS   K   +K + A+F +  K GI PD  ++  L+       
Sbjct: 373 E----MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAG 428

Query: 511 RMSESEMFFEE-AVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
            + +   FF   +  +    T   Y  M+  + R G L  A +    + D    P++I +
Sbjct: 429 LIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRL---ICDMPMRPNAIVW 485

Query: 570 GTLISG--LCKQSKLDE 584
           G L+SG  L K ++L E
Sbjct: 486 GALLSGCRLVKDTQLAE 502



 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 9/257 (3%)

Query: 424 PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALAL 483
           PNI  YN++++G        E   +      +GL     T+ +++    + +  K  + L
Sbjct: 74  PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133

Query: 484 FSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR--TYTSMICGY 541
            S + K G   D+ + T+L++++    R++++   F+E      IP +   T+T++  GY
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE------IPDRSVVTWTALFSGY 187

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCE 601
              G    AI  F +M + G  PDS     ++S       LD    +   M E  +    
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS 247

Query: 602 VTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLD 661
             R TL   Y K      A  + D + +K  I T +T+++   S          F ++L 
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMVEKD-IVTWSTMIQGYASNSFPKEGIELFLQMLQ 306

Query: 662 MDFHVNRVTLAAFMTAC 678
            +   ++ ++  F+++C
Sbjct: 307 ENLKPDQFSIVGFLSSC 323



 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/254 (20%), Positives = 110/254 (43%), Gaps = 8/254 (3%)

Query: 346 LVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAG 405
           L+ S    PN+  Y ++ING+  +   +    L   +++ GL  +  T+  ++    +A 
Sbjct: 66  LLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRAS 125

Query: 406 NFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYN 465
           + +   DL +L+ + GF+ ++    +++      GR+ +A+K+    F    +   VT+ 
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKL----FDEIPDRSVVTWT 181

Query: 466 ILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRF 525
            L S +      ++A+ LF KM + G++PD +    +++       +   E   +     
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM 241

Query: 526 GFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEA 585
                    T+++  Y + G +  A   F  M +     D + + T+I G    S   E 
Sbjct: 242 EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVE----KDIVTWSTMIQGYASNSFPKEG 297

Query: 586 RGLYDSMIEKGLIP 599
             L+  M+++ L P
Sbjct: 298 IELFLQMLQENLKP 311


>AT3G61360.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:22704630-22706126 REVERSE
           LENGTH=498
          Length = 498

 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 9/321 (2%)

Query: 283 PNLINFTSMIEGLCK---RGSIKQAFEMLEEMVCQGWKPN--VYTHTALIDGLCKKGWTE 337
           PNL++F SM   LCK    GS ++  E   +M  + ++    V     L+   C +   +
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMK 193

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
           +A  +F KL    N  P+V T   ++ G+     +   E+    M ++G  PN+ TY   
Sbjct: 194 EARSIFEKLHSRFN--PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIR 251

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGL 457
           IDG CK  NF  A  L   M R  F   +     ++ G        +A ++  +    GL
Sbjct: 252 IDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGL 311

Query: 458 EADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEM 517
             D   YN L+S   K  D+  A+ +  +M + GI+PD  ++ ++     + K    + +
Sbjct: 312 TPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGV 371

Query: 518 --FFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
             ++++      +P   T   ++  +C  G + + +  +  M + G  P   A   L + 
Sbjct: 372 CEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTA 431

Query: 576 LCKQSKLDEARGLYDSMIEKG 596
           LC + + ++A       +E+G
Sbjct: 432 LCARRRANDAFECSWQTVERG 452



 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 154/336 (45%), Gaps = 13/336 (3%)

Query: 119 SRFRHFMRLYIVCATSLIGNGNLQ--KAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGM 176
           +R R+F + + + A       NL   K+  ++ C +   A+ G  +E +E   +M  +  
Sbjct: 114 ARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKI---AKFGSYEETLEAFVKMEKEIF 170

Query: 177 VPN--TQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
                    N++++  C    +  A+ +FE++ +R  +PD  +  ++++ + + G+V   
Sbjct: 171 RKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTAT 229

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
           + +   M+ RGF  ++ ++ + I  FC+K     ALR F     +     +   T++I G
Sbjct: 230 ELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHG 289

Query: 295 L-CKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNK 353
               R  IK A ++ +E+  +G  P+   + AL+  L K G    A ++ +K +  +  +
Sbjct: 290 SGVARNKIK-ARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKV-MKEMEEKGIE 347

Query: 354 PNVLTYTAMINGYCRDDKL--NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAF 411
           P+ +T+ +M  G  +  +   N       +MKE+ L+P T T   L+   C  G      
Sbjct: 348 PDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGL 407

Query: 412 DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
           DL   M  +G+ P+      +   LC + R  +A++
Sbjct: 408 DLWKYMLEKGYCPHGHALELLTTALCARRRANDAFE 443



 Score = 79.3 bits (194), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 6/220 (2%)

Query: 389 PNTNTYTTLIDGHCKA---GNFERAFDLMNLMSREGFSPN--ICTYNAIVDGLCKKGRVQ 443
           PN  ++ ++    CK    G++E   +    M +E F     +  +N ++   C +  ++
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMK 193

Query: 444 EAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLI 503
           EA  +  +  H+    D  T NIL+    +  D+      + +M K G +P+  +Y   I
Sbjct: 194 EARSIF-EKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRI 252

Query: 504 AVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV 563
             FC+++   E+   FE+  R  F  T +  T++I G     N   A + F  +S  G  
Sbjct: 253 DGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLT 312

Query: 564 PDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
           PD  AY  L+S L K   +  A  +   M EKG+ P  VT
Sbjct: 313 PDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVT 352



 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 118/303 (38%), Gaps = 45/303 (14%)

Query: 218 YRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFS 277
           + +++ A+C    + EA      +  R F  D  +  +++  F E G  T    ++H+  
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237

Query: 278 DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTE 337
             G KPN + +   I+G CK+ +  +A  + E+M    +   V   T LI G        
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHG-------- 289

Query: 338 KAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTL 397
                                     +G  R+    +A  L   + ++GL P+   Y  L
Sbjct: 290 --------------------------SGVARNKI--KARQLFDEISKRGLTPDCGAYNAL 321

Query: 398 IDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR-----VQEAYKMLKDG 452
           +    K G+   A  +M  M  +G  P+  T++++  G+ K        V E Y+ +K+ 
Sbjct: 322 MSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKE- 380

Query: 453 FHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRM 512
               L     T  +L+   C   ++   L L+  M + G  P  H+   L    C  +R 
Sbjct: 381 --RSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRA 438

Query: 513 SES 515
           +++
Sbjct: 439 NDA 441


>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
           superfamily protein | chr2:868468-870279 FORWARD
           LENGTH=603
          Length = 603

 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 161/399 (40%), Gaps = 54/399 (13%)

Query: 198 YAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLII 257
           YA++LFE MS     PD   +  M   Y +  N LE       +L+ G L DN +F  ++
Sbjct: 81  YARHLFEAMS----EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136

Query: 258 SEFCEKGFATRALRYFHKFS-DMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGW 316
              C    A    R  H  S  +GL  N+    ++I                        
Sbjct: 137 KA-CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLI------------------------ 171

Query: 317 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAE 376
             N+YT    +D          A  +F ++V     +P V+ Y AMI GY R ++ N A 
Sbjct: 172 --NMYTECEDVDS---------ARCVFDRIV-----EPCVVCYNAMITGYARRNRPNEAL 215

Query: 377 MLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGL 436
            L   M+ + L PN  T  +++      G+ +    +     +  F   +    A++D  
Sbjct: 216 SLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMF 275

Query: 437 CKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDI 496
            K G + +A  +    F      D   ++ +I  +      ++++ +F +M    +QPD 
Sbjct: 276 AKCGSLDDAVSI----FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDE 331

Query: 497 HSYTTLIAVFCREKRMSESEMFFEEAV-RFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
            ++  L+       R+ E   +F + V +FG +P+ + Y SM+    R GNL  A +F  
Sbjct: 332 ITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFID 391

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIE 594
           ++      P  + +  L++     + LD A  + + + E
Sbjct: 392 KLP---ISPTPMLWRILLAACSSHNNLDLAEKVSERIFE 427



 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/284 (20%), Positives = 115/284 (40%), Gaps = 44/284 (15%)

Query: 352 NKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAF 411
           ++P+++ + +M  GY R         L   + E G++P+  T+ +L+     A   E   
Sbjct: 90  SEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGR 149

Query: 412 DLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEH 471
            L  L  + G   N+     +++   +   V  A  +    F   +E   V YN +I+ +
Sbjct: 150 QLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCV----FDRIVEPCVVCYNAMITGY 205

Query: 472 CKQADIKQALALFSKMAKSGIQPD----------------------IHSY---------- 499
            ++    +AL+LF +M    ++P+                      IH Y          
Sbjct: 206 ARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYV 265

Query: 500 ---TTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHR 556
              T LI +F +   + ++   FE+ +R+      + +++MI  Y   G    ++  F R
Sbjct: 266 KVNTALIDMFAKCGSLDDAVSIFEK-MRYK---DTQAWSAMIVAYANHGKAEKSMLMFER 321

Query: 557 MSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK-GLIP 599
           M      PD I +  L++      +++E R  +  M+ K G++P
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVP 365


>AT5G59600.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:24011315-24012919 REVERSE
           LENGTH=534
          Length = 534

 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 170/377 (45%), Gaps = 17/377 (4%)

Query: 221 MVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMG 280
           +V  Y + G VL+A K    M  R    D +   ++I      G+   +L +F +    G
Sbjct: 57  LVTFYVECGKVLDARKVFDEMPKR----DISGCVVMIGACARNGYYQESLDFFREMYKDG 112

Query: 281 LKPNLINFTSMIEGLCKRGSIKQAF-EMLEEMVCQ-GWKPNVYTHTALIDGLCKKGWTEK 338
           LK +     S+++    R  + + F +M+  +V +  ++ + +  ++LID   K G    
Sbjct: 113 LKLDAFIVPSLLKA--SRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGN 170

Query: 339 AFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI 398
           A ++F     S+  + +++ + AMI+GY  + + + A  L+  MK  G+ P+  T+  LI
Sbjct: 171 ARKVF-----SDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALI 225

Query: 399 DGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLE 458
            G     N E+  +++ LM  +G+ P++ ++ +I+ GL    + ++A+   K    +GL 
Sbjct: 226 SGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLY 285

Query: 459 ADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMF 518
            +  T   L+      A +K    +      +G++      + L+ ++ +   +SE+ + 
Sbjct: 286 PNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMIL 345

Query: 519 FEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCK 578
           F +  +     T  T+ SMI  Y   G    A++ F +M   G   D + +  +++    
Sbjct: 346 FRKTPK----KTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSH 401

Query: 579 QSKLDEARGLYDSMIEK 595
               D  + L+  M  K
Sbjct: 402 AGLTDLGQNLFLLMQNK 418



 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 133/305 (43%), Gaps = 10/305 (3%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           ++  ++  +++ G +  A ++  ++  Q +V      N ++         D A  L ++M
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLV----VFNAMISGYANNSQADEALNLVKDM 209

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
              G+ PD  ++  ++  +  M N  +  + L +M   G+  D  S+T IIS        
Sbjct: 210 KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQN 269

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTAL 326
            +A   F +    GL PN     +++        +K   E+    V  G + + +  +AL
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSAL 329

Query: 327 IDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQG 386
           +D   K G+  +A  LF K       K   +T+ +MI  Y      ++A  L  +M+  G
Sbjct: 330 LDMYGKCGFISEAMILFRK-----TPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATG 384

Query: 387 LIPNTNTYTTLIDGHCKAGNFERAFDLMNLM-SREGFSPNICTYNAIVDGLCKKGRVQEA 445
              +  T+T ++     AG  +   +L  LM ++    P +  Y  +VD L + G++ EA
Sbjct: 385 EKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEA 444

Query: 446 YKMLK 450
           Y+M+K
Sbjct: 445 YEMIK 449



 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 11/267 (4%)

Query: 430 NAIVDGLCKKGRVQEAYKMLKD-GFHNGLEADKVTYNILISEHCKQADIKQALALFSKMA 488
           ++++D   K G V  A K+  D G     E D V +N +IS +   +   +AL L   M 
Sbjct: 156 SSLIDMYSKFGEVGNARKVFSDLG-----EQDLVVFNAMISGYANNSQADEALNLVKDMK 210

Query: 489 KSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLT 548
             GI+PD+ ++  LI+ F   +   +     E     G+ P   ++TS+I G        
Sbjct: 211 LLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNE 270

Query: 549 MAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLA 608
            A   F +M  HG  P+S    TL+      + +   + ++   +  GL      R  L 
Sbjct: 271 KAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALL 330

Query: 609 YEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFFHKLLDMDFHVNR 668
             Y K      AM++  +  KK  + T  +++    +      A   F ++      ++ 
Sbjct: 331 DMYGKCGFISEAMILFRKTPKKTTV-TFNSMIFCYANHGLADKAVELFDQMEATGEKLDH 389

Query: 669 VTLAAFMTACYESNKYALVSDLSARIY 695
           +T  A +TAC     +A ++DL   ++
Sbjct: 390 LTFTAILTAC----SHAGLTDLGQNLF 412



 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 121/304 (39%), Gaps = 52/304 (17%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNL----------------VMKIA 190
           V   M+  +A   +  EA+ +V +M   G+ P+  T N                 ++++ 
Sbjct: 185 VFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM 244

Query: 191 CEMG----LVDYAQYL---------------FEEMSARGVHPDSASYRVMV-----VAYC 226
           C  G    +V +   +               F++M   G++P+SA+   ++     +AY 
Sbjct: 245 CLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYM 304

Query: 227 KMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLI 286
           K G  +     ++ + D GF+      + ++  + + GF + A+  F K      K   +
Sbjct: 305 KHGKEIHGYSVVTGLEDHGFVR-----SALLDMYGKCGFISEAMILFRKTP----KKTTV 355

Query: 287 NFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 346
            F SMI      G   +A E+ ++M   G K +  T TA++      G T+    LFL +
Sbjct: 356 TFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLM 415

Query: 347 VRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGN 406
                  P +  Y  M++   R  KL  A  ++  M+ +   P+   +  L+      GN
Sbjct: 416 QNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRME---PDLFVWGALLAACRNHGN 472

Query: 407 FERA 410
            E A
Sbjct: 473 MELA 476


>AT3G16610.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr3:5656371-5658335 REVERSE LENGTH=654
          Length = 654

 Score = 96.3 bits (238), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 103/460 (22%), Positives = 191/460 (41%), Gaps = 20/460 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+R++A     ++A+++ ++M N G+ P   T   V+K    +  +D  + +   ++   
Sbjct: 74  MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
              D      +V  Y K G +  A K    M  R  +  NA    +IS F      T  +
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNA----MISGFSLHCCLTDVI 189

Query: 271 RYFHKFSDM-GLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
             F     + GL PNL     M   L + G++++   +       G+  ++   T ++D 
Sbjct: 190 GLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDV 249

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRA-EMLLGRMKEQGLI 388
             K      A R+F       + K N +T++AMI GY  ++ +  A E+    +    + 
Sbjct: 250 YAKSKCIIYARRVF-----DLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVA 304

Query: 389 PNTNTYTTLIDGHC-KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYK 447
             T     LI   C + G+      +     + GF  ++   N I+    K G + +A++
Sbjct: 305 MVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFR 364

Query: 448 MLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFC 507
              +    GL+ D ++YN LI+        +++  LF +M  SGI+PDI +   ++    
Sbjct: 365 QFSE---IGLK-DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420

Query: 508 REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSI 567
               +          V  G+        +++  Y + G L +A + F  M       D +
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKR----DIV 476

Query: 568 AYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITL 607
           ++ T++ G        EA  L++SM E G+ P EVT + +
Sbjct: 477 SWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAI 516



 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/477 (21%), Positives = 195/477 (40%), Gaps = 60/477 (12%)

Query: 248 VDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEM 307
           ++  ++ L+I  +    FA +AL  ++K  + G++P    +  +++      +I     +
Sbjct: 66  INPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLI 125

Query: 308 LEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGY- 366
              + C  +  ++Y  TAL+D   K G  E A ++F      E  K +++ + AMI+G+ 
Sbjct: 126 HSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVF-----DEMPKRDMVAWNAMISGFS 180

Query: 367 ---CRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS 423
              C  D +    + L   +  GL PN +T   +     +AG       +    +R GFS
Sbjct: 181 LHCCLTDVIG---LFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFS 237

Query: 424 PNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALAL 483
            ++     I+D   K   +  A ++    F    + ++VT++ +I  + +   IK+A  +
Sbjct: 238 NDLVVKTGILDVYAKSKCIIYARRVFDLDF----KKNEVTWSAMIGGYVENEMIKEAGEV 293

Query: 484 FSKM-AKSGIQPDIHSYTTLIAVFC-REKRMSESEMFFEEAVRFGFIPTKRTYTSMICGY 541
           F +M     +         LI + C R   +S        AV+ GFI       ++I  Y
Sbjct: 294 FFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFY 353

Query: 542 CREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCE 601
            + G+L  A + F  +     + D I+Y +LI+G     + +E+  L+  M   G+ P  
Sbjct: 354 AKYGSLCDAFRQFSEIG----LKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDI 409

Query: 602 VTRITL---------------AYEYCKI------DDCCSAMV--------------ILDR 626
            T + +                + YC +         C+A++              + D 
Sbjct: 410 TTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDT 469

Query: 627 LEKKLWIRTATTLVRKLCSERKVGMAAL-FFHKLLDMDFHVNRVTLAAFMTACYESN 682
           + K+  +   T L         +G  AL  F+ + +   + + VTL A ++AC  S 
Sbjct: 470 MHKRDIVSWNTMLFG--FGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSG 524



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 97/468 (20%), Positives = 176/468 (37%), Gaps = 58/468 (12%)

Query: 147 VMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEM 206
           V   +V  +A+ G L+ A+++  EM  + MV     ++      C   L D      +  
Sbjct: 140 VCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC---LTDVIGLFLDMR 196

Query: 207 SARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFA 266
              G+ P+ ++   M  A  + G + E           GF  D    T I+  + +    
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK---- 252

Query: 267 TRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ------------ 314
           ++ + Y  +  D+  K N + +++MI G  +   IK+A E+  +M+              
Sbjct: 253 SKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIG 312

Query: 315 -------------------------GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
                                    G+  ++     +I    K G    AFR F     S
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQF-----S 367

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
           E    +V++Y ++I G   + +   +  L   M+  G+ P+  T   ++           
Sbjct: 368 EIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGH 427

Query: 410 AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILIS 469
                      G++ N    NA++D   K G++  A ++  D  H   + D V++N ++ 
Sbjct: 428 GSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVF-DTMH---KRDIVSWNTMLF 483

Query: 470 EHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVR--FGF 527
                   K+AL+LF+ M ++G+ PD  +   +++       + E +  F    R  F  
Sbjct: 484 GFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNV 543

Query: 528 IPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISG 575
           IP    Y  M     R G L  A  F ++M      PD    GTL+S 
Sbjct: 544 IPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFE---PDIRVLGTLLSA 588



 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 131/323 (40%), Gaps = 29/323 (8%)

Query: 140 NLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYA 199
           + +K       M+  + E   +KEA E+ F+M    +V +    N+ M     +GL+   
Sbjct: 266 DFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM----LVND----NVAMVTPVAIGLILMG 317

Query: 200 QYLFEEMSA-RGVH---------PDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVD 249
              F ++S  R VH          D      ++  Y K G++ +A +  S +     L D
Sbjct: 318 CARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEI----GLKD 373

Query: 250 NASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLE 309
             S+  +I+          + R FH+    G++P++     ++       ++        
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433

Query: 310 EMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRD 369
             V  G+  N     AL+D   K G  + A R+F  +     +K +++++  M+ G+   
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM-----HKRDIVSWNTMLFGFGIH 488

Query: 370 DKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS--PNIC 427
                A  L   M+E G+ P+  T   ++     +G  +    L N MSR  F+  P I 
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID 548

Query: 428 TYNAIVDGLCKKGRVQEAYKMLK 450
            YN + D L + G + EAY  + 
Sbjct: 549 HYNCMTDLLARAGYLDEAYDFVN 571


>AT1G69350.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:26069882-26072245 FORWARD
           LENGTH=787
          Length = 787

 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 109/509 (21%), Positives = 224/509 (44%), Gaps = 68/509 (13%)

Query: 139 GNLQKAHEVMQCM-----------VRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVM 187
           GNL  A +V   M           V S  E G + +A+ M   M + G+ P+  T+  V+
Sbjct: 150 GNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVV 209

Query: 188 KIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFL 247
           +   E+G +  A+ +  +++ +    D      ++  Y K G++L +++    +  +   
Sbjct: 210 EGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK--- 266

Query: 248 VDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIE-----GLCKRGSIK 302
            +  S+T +IS +    F+ +ALR F +    G++PNL+   S++      GL + G   
Sbjct: 267 -NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSV 325

Query: 303 QAFEM--------------LEEMVCQGWK-------------PNVYTHTALIDGLCKKGW 335
             F +              L E+  +  K              N+    +LI     +G 
Sbjct: 326 HGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGM 385

Query: 336 TEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTN--- 392
             +A  LF ++V ++  KP+  T  + I+  C +  L    + LG+ +  G +  T+   
Sbjct: 386 VIQALGLFRQMV-TQRIKPDAFTLASSISA-CENAGL----VPLGK-QIHGHVIRTDVSD 438

Query: 393 --TYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLK 450
                +LID + K+G+ + A  + N +       ++ T+N+++ G  + G   EA  +  
Sbjct: 439 EFVQNSLIDMYSKSGSVDSASTVFNQIKHR----SVVTWNSMLCGFSQNGNSVEAISLFD 494

Query: 451 DGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREK 510
             +H+ LE ++VT+  +I        +++   +  K+  SG++ D+ + T LI ++ +  
Sbjct: 495 YMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCG 553

Query: 511 RMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYG 570
            ++ +E  F    R     +  +++SMI  Y   G +  AI  F++M + G  P+ + + 
Sbjct: 554 DLNAAETVF----RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFM 609

Query: 571 TLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            ++S       ++E +  ++ M   G+ P
Sbjct: 610 NVLSACGHSGSVEEGKYYFNLMKSFGVSP 638



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/509 (20%), Positives = 209/509 (41%), Gaps = 58/509 (11%)

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           GV  D+     ++  Y + GN+ +A+K    M  R    D  +++ ++S   E G   +A
Sbjct: 131 GVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVR----DLVAWSTLVSSCLENGEVVKA 186

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           LR F    D G++P+ +   S++EG  + G ++ A  +  ++  + +  +     +L+  
Sbjct: 187 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTM 246

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
             K G    + R+F K+      K N +++TAMI+ Y R +   +A      M + G+ P
Sbjct: 247 YSKCGDLLSSERIFEKIA-----KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYN-AIVDGLCKKGRVQEAYKM 448
           N  T  +++      G       +     R    PN  + + A+V+   + G++ +   +
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETV 361

Query: 449 LKDGFHNGLEADK--VTYNILISEHCKQADIKQALALFSKMAKSGIQPD----------- 495
           L+      + +D+  V +N LIS +  +  + QAL LF +M    I+PD           
Sbjct: 362 LR------VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISAC 415

Query: 496 -----------IHSYT------------TLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
                      IH +             +LI ++ +   +  +   F +      +    
Sbjct: 416 ENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVV---- 471

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           T+ SM+CG+ + GN   AI  F  M       + + +  +I        L++ + ++  +
Sbjct: 472 TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL 531

Query: 593 IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMA 652
           I  GL     T   L   Y K  D  +A  +  R      I + ++++       ++G A
Sbjct: 532 IISGLKDL-FTDTALIDMYAKCGDLNAAETVF-RAMSSRSIVSWSSMINAYGMHGRIGSA 589

Query: 653 ALFFHKLLDMDFHVNRVTLAAFMTACYES 681
              F+++++     N V     ++AC  S
Sbjct: 590 ISTFNQMVESGTKPNEVVFMNVLSACGHS 618



 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/443 (20%), Positives = 186/443 (41%), Gaps = 19/443 (4%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+ S+      ++A+    EM   G+ PN  TL  V+     +GL+   + +      R 
Sbjct: 274 MISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE 333

Query: 211 VHPDSASYRVMVVA-YCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
           + P+  S  + +V  Y + G + + +  L V+ DR  +  N+    +IS +  +G   +A
Sbjct: 334 LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNS----LISLYAHRGMVIQA 389

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           L  F +     +KP+     S I   C+   +    + +   V +    + +   +LID 
Sbjct: 390 LGLFRQMVTQRIKPDAFTLASSISA-CENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDM 448

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
             K G  + A  +F ++        +V+T+ +M+ G+ ++     A  L   M    L  
Sbjct: 449 YSKSGSVDSASTVFNQI-----KHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           N  T+  +I      G+ E+   + + +   G   ++ T  A++D   K G +  A  + 
Sbjct: 504 NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETV- 561

Query: 450 KDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCRE 509
              F        V+++ +I+ +     I  A++ F++M +SG +P+   +  +++     
Sbjct: 562 ---FRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618

Query: 510 KRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAY 569
             + E + +F     FG  P    +   I    R G+L  A +    M     + D+  +
Sbjct: 619 GSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMP---FLADASVW 675

Query: 570 GTLISGLCKQSKLDEARGLYDSM 592
           G+L++G     K+D  + + + +
Sbjct: 676 GSLVNGCRIHQKMDIIKAIKNDL 698



 Score = 72.8 bits (177), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 163/369 (44%), Gaps = 25/369 (6%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACE-MGLVDYAQYLFEEMSAR 209
           ++  +A  G + +A+ +  +M  Q + P+  TL   +  ACE  GLV   + +   +   
Sbjct: 376 LISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSIS-ACENAGLVPLGKQIHGHVIRT 434

Query: 210 GVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRA 269
            V  D      ++  Y K G+V  A    + +  R  +  N+    ++  F + G +  A
Sbjct: 435 DV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNS----MLCGFSQNGNSVEA 489

Query: 270 LRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDG 329
           +  F       L+ N + F ++I+     GS+++   +  +++  G K +++T TALID 
Sbjct: 490 ISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDM 548

Query: 330 LCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIP 389
             K G    A  +F  +         ++++++MIN Y    ++  A     +M E G  P
Sbjct: 549 YAKCGDLNAAETVFRAMSSRS-----IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKP 603

Query: 390 NTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
           N   +  ++     +G+ E      NLM   G SPN   +   +D L + G ++EAY+ +
Sbjct: 604 NEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 663

Query: 450 KDGFHNGLEADKVTYNILISEHCK---QADIKQALALFSKMAKSGIQPDIHSYTTLIA-V 505
           K+       AD   +  L++  C+   + DI +A+    K   S I  D   Y TL++ +
Sbjct: 664 KE---MPFLADASVWGSLVN-GCRIHQKMDIIKAI----KNDLSDIVTDDTGYYTLLSNI 715

Query: 506 FCREKRMSE 514
           +  E    E
Sbjct: 716 YAEEGEWEE 724


>AT5G06540.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr5:1999181-2001049 REVERSE
           LENGTH=622
          Length = 622

 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/348 (20%), Positives = 153/348 (43%), Gaps = 14/348 (4%)

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMV 312
           F L+I  F      ++A  ++ +     + P+ I F  +I+   +   +    +   ++V
Sbjct: 85  FNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIV 144

Query: 313 CQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKL 372
             G++ +VY   +L+      G+   A R+F ++        +V+++T+M+ GYC+   +
Sbjct: 145 RFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM-----GFRDVVSWTSMVAGYCKCGMV 199

Query: 373 NRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAI 432
             A  +   M  + L     T++ +I+G+ K   FE+A DL   M REG   N     ++
Sbjct: 200 ENAREMFDEMPHRNLF----TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255

Query: 433 VDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGI 492
           +      G ++   +  +    + +  + +    L+    +  DI++A+ +F  + ++  
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET-- 313

Query: 493 QPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIK 552
             D  S++++I          ++  +F + +  GFIP   T+T+++      G +   ++
Sbjct: 314 --DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE 371

Query: 553 FFHRMS-DHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIP 599
            +  M  DHG  P    YG ++  L +  KL EA      M  K   P
Sbjct: 372 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAP 419



 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/403 (21%), Positives = 165/403 (40%), Gaps = 24/403 (5%)

Query: 195 LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFT 254
           L+ YA  +F ++     +P+   + +++  +       +A  + + ML      DN +F 
Sbjct: 66  LLGYAYGIFSQIQ----NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFP 121

Query: 255 LIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQ 314
            +I    E        +   +    G + ++    S++      G I  A  +  +M   
Sbjct: 122 FLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM--- 178

Query: 315 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNR 374
           G++ +V + T+++ G CK G  E A  +F      E    N+ T++ MINGY +++   +
Sbjct: 179 GFR-DVVSWTSMVAGYCKCGMVENAREMF-----DEMPHRNLFTWSIMINGYAKNNCFEK 232

Query: 375 AEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVD 434
           A  L   MK +G++ N     ++I      G  E        + +   + N+    A+VD
Sbjct: 233 AIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVD 292

Query: 435 GLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQP 494
              + G +++A  +    F    E D ++++ +I          +A+  FS+M   G  P
Sbjct: 293 MFWRCGDIEKAIHV----FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIP 348

Query: 495 DIHSYTTLIAVFCREKRMSESEMFFEEAVR--FGFIPTKRTYTSMICGYCREGNLTMAIK 552
              ++T +++  C    + E  +   E ++   G  P    Y  ++    R G L  A  
Sbjct: 349 RDVTFTAVLSA-CSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAEN 407

Query: 553 FFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEK 595
           F  +M      P++   G L+ G CK  K  E      +M+ K
Sbjct: 408 FILKMH---VKPNAPILGALL-GACKIYKNTEVAERVGNMLIK 446



 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 123/286 (43%), Gaps = 13/286 (4%)

Query: 318 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEM 377
           PN++    LI          KAF  + ++++S    P+ +T+  +I      + +   E 
Sbjct: 80  PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRI-WPDNITFPFLIKASSEMECVLVGEQ 138

Query: 378 LLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLC 437
              ++   G   +     +L+  +   G    A  +   M   GF  ++ ++ ++V G C
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM---GFR-DVVSWTSMVAGYC 194

Query: 438 KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIH 497
           K G V+ A +M  +  H  L     T++I+I+ + K    ++A+ LF  M + G+  +  
Sbjct: 195 KCGMVENAREMFDEMPHRNL----FTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250

Query: 498 SYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRM 557
              ++I+       +   E  +E  V+          T+++  + R G++  AI  F  +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310

Query: 558 SDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVT 603
            +     DS+++ ++I GL       +A   +  MI  G IP +VT
Sbjct: 311 PE----TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVT 352



 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 26/255 (10%)

Query: 191 CEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDN 250
           C+ G+V+ A+ +F+EM  R +     ++ +M+  Y K     +A      M   G + + 
Sbjct: 194 CKCGMVENAREMFDEMPHRNLF----TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249

Query: 251 ASFTLIISEFCEKG---FATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQA--- 304
                +IS     G   F  RA  Y  K S M +  NLI  T++++   + G I++A   
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVK-SHMTV--NLILGTALVDMFWRCGDIEKAIHV 306

Query: 305 FEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMIN 364
           FE L E     W       +++I GL   G   KA   F +++ S    P  +T+TA+++
Sbjct: 307 FEGLPETDSLSW-------SSIIKGLAVHGHAHKAMHYFSQMI-SLGFIPRDVTFTAVLS 358

Query: 365 GYCRDDKLNRA-EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFS 423
                  + +  E+     K+ G+ P    Y  ++D   +AG    A    N + +    
Sbjct: 359 ACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA---ENFILKMHVK 415

Query: 424 PNICTYNAIVDGLCK 438
           PN     A++ G CK
Sbjct: 416 PNAPILGALL-GACK 429



 Score = 53.5 bits (127), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/322 (20%), Positives = 127/322 (39%), Gaps = 25/322 (7%)

Query: 367 CRDDK-LNRAEMLLGR---MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGF 422
           C DD   N+   LLG    +  Q   PN   +  LI          +AF     M +   
Sbjct: 54  CVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRI 113

Query: 423 SPNICTYNAIVDGL----CKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIK 478
            P+  T+  ++       C     Q   ++++ GF N    D    N L+  +     I 
Sbjct: 114 WPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN----DVYVENSLVHMYANCGFIA 169

Query: 479 QALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR--TYTS 536
            A  +F +M       D+ S+T+++A +C+   +  +   F+E      +P +   T++ 
Sbjct: 170 AAGRIFGQMGFR----DVVSWTSMVAGYCKCGMVENAREMFDE------MPHRNLFTWSI 219

Query: 537 MICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSMIEKG 596
           MI GY +      AI  F  M   G V +     ++IS       L+     Y+ +++  
Sbjct: 220 MINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSH 279

Query: 597 LIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTLVRKLCSERKVGMAALFF 656
           +    +    L   + +  D   A+ + + L +   + + +++++ L        A  +F
Sbjct: 280 MTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL-SWSSIIKGLAVHGHAHKAMHYF 338

Query: 657 HKLLDMDFHVNRVTLAAFMTAC 678
            +++ + F    VT  A ++AC
Sbjct: 339 SQMISLGFIPRDVTFTAVLSAC 360


>AT5G46580.1 | Symbols:  | pentatricopeptide (PPR) repeat-containing
           protein | chr5:18897510-18899645 REVERSE LENGTH=711
          Length = 711

 Score = 95.9 bits (237), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 6/298 (2%)

Query: 166 EMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAY 225
           EM  EM   G+  +  T + ++  A    L + A   FE M   G+ PD  +Y  ++  Y
Sbjct: 207 EMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVY 266

Query: 226 CKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRY-FHKFSDMGLKPN 284
            K G V E        +  G+  D  +F+++   F E G     +RY   +   M +KPN
Sbjct: 267 SKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG-DYDGIRYVLQEMKSMDVKPN 325

Query: 285 LINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 344
           ++ + +++E + + G    A  +  EM+  G  PN  T TAL+    K  W   A +L+ 
Sbjct: 326 VVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWE 385

Query: 345 KLVRSENNKPNVLTYTAMINGYCRDDKL-NRAEMLLGRMKEQ-GLIPNTNTYTTLIDGHC 402
           ++ +++    + + Y  ++N  C D  L   AE L   MKE     P+  +YT +++ + 
Sbjct: 386 EM-KAKKWPMDFILYNTLLN-MCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYG 443

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEAD 460
             G  E+A +L   M + G   N+     +V  L K  R+ +   +       G++ D
Sbjct: 444 SGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501



 Score = 86.3 bits (212), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 86/392 (21%), Positives = 157/392 (40%), Gaps = 22/392 (5%)

Query: 110 SFFHWAIGYSRFRHFMRLYIVCATSLIGNGNLQKAHEVMQCMVRSFAEIGRL-------- 161
           +FF+W    S F      Y V   SL      Q   E+   MV+   E+  +        
Sbjct: 171 TFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC 230

Query: 162 -------KEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPD 214
                   +A+E    M+  G++P+  T + ++ +  + G V+    L+E   A G  PD
Sbjct: 231 AKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPD 290

Query: 215 SASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFH 274
           + ++ V+   + + G+       L  M       +   +  ++      G    A   F+
Sbjct: 291 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFN 350

Query: 275 KFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKG 334
           +  + GL PN    T++++   K    + A ++ EEM  + W  +   +  L++     G
Sbjct: 351 EMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIG 410

Query: 335 WTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTY 394
             E+A RLF  +  S   +P+  +YTAM+N Y    K  +A  L   M + G+  N    
Sbjct: 411 LEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGC 470

Query: 395 TTLIDGHCKAGNFERAFDLMNLMSREGFSPN--ICTYNAIVDGLCKKGRVQEAYKMLKDG 452
           T L+    KA   +    + +L  + G  P+  +C     V  LC+     E      + 
Sbjct: 471 TCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLER 530

Query: 453 FHNGLEADKVTY-NILISEHCKQADIKQALAL 483
            +  L    VT+ N+++ E  +   +K+   L
Sbjct: 531 ANKKL----VTFVNLIVDEKTEYETVKEEFKL 558



 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 4/188 (2%)

Query: 445 AYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIA 504
           A +M+KDG    +E D +TY+ +I+   +     +A+  F +M K+G+ PD  +Y+ ++ 
Sbjct: 209 ALEMVKDG----VELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILD 264

Query: 505 VFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVP 564
           V+ +  ++ E    +E AV  G+ P    ++ +   +   G+          M      P
Sbjct: 265 VYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKP 324

Query: 565 DSIAYGTLISGLCKQSKLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVIL 624
           + + Y TL+  + +  K   AR L++ M+E GL P E T   L   Y K      A+ + 
Sbjct: 325 NVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLW 384

Query: 625 DRLEKKLW 632
           + ++ K W
Sbjct: 385 EEMKAKKW 392



 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 3/220 (1%)

Query: 376 EMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDG 435
           EM L  +K+ G+  +  TY+T+I    +   + +A +    M + G  P+  TY+AI+D 
Sbjct: 207 EMALEMVKD-GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDV 265

Query: 436 LCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPD 495
             K G+V+E   + +     G + D + +++L     +  D      +  +M    ++P+
Sbjct: 266 YSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPN 325

Query: 496 IHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFH 555
           +  Y TL+    R  +   +   F E +  G  P ++T T+++  Y +      A++ + 
Sbjct: 326 VVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWE 385

Query: 556 RMSDHGCVPDSIAYGTLISGLCKQSKL-DEARGLYDSMIE 594
            M       D I Y TL++ +C    L +EA  L++ M E
Sbjct: 386 EMKAKKWPMDFILYNTLLN-MCADIGLEEEAERLFNDMKE 424



 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 3/158 (1%)

Query: 521 EAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQS 580
           E V+ G      TY+++I    R      AI++F RM   G +PD + Y  ++    K  
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270

Query: 581 KLDEARGLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEK---KLWIRTAT 637
           K++E   LY+  +  G  P  +    L   + +  D      +L  ++    K  +    
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330

Query: 638 TLVRKLCSERKVGMAALFFHKLLDMDFHVNRVTLAAFM 675
           TL+  +    K G+A   F+++L+     N  TL A +
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALV 368


>AT3G17370.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr3:5949006-5949644 REVERSE
           LENGTH=212
          Length = 212

 Score = 95.9 bits (237), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 13/204 (6%)

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGR 441
           M+E  +  +T  Y  +I G CKAG F+ A ++   +   G  P++ TYN ++      GR
Sbjct: 5   MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGR 63

Query: 442 VQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTT 501
            ++ Y  +      GL  D +TYN +I   CKQ  + QA     K++KS       ++ T
Sbjct: 64  AEKLYAEM---IRRGLVPDTITYNSMIHGLCKQNKLAQA----RKVSKS-----CSTFNT 111

Query: 502 LIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHG 561
           LI  +C+  R+ +    F E  R G +    TYT++I G+ + G+   A+  F  M  +G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171

Query: 562 CVPDSIAYGTLISGLCKQSKLDEA 585
               SI +  ++  LC + +L +A
Sbjct: 172 VYSSSITFRDILPQLCSRKELRKA 195



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 14/210 (6%)

Query: 240 VMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRG 299
           VM +    +D A + +II   C+ G    A   F      GL+P++  +  MI    +  
Sbjct: 4   VMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFS 59

Query: 300 SIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTY 359
           S+ +A ++  EM+ +G  P+  T+ ++I GLCK+           KL ++     +  T+
Sbjct: 60  SLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQN----------KLAQARKVSKSCSTF 109

Query: 360 TAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR 419
             +INGYC+  ++     L   M  +G++ N  TYTTLI G  + G+F  A D+   M  
Sbjct: 110 NTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169

Query: 420 EGFSPNICTYNAIVDGLCKKGRVQEAYKML 449
            G   +  T+  I+  LC +  +++A  ML
Sbjct: 170 NGVYSSSITFRDILPQLCSRKELRKAVAML 199



 Score = 92.4 bits (228), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 14/193 (7%)

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
           +  +I GLCK G  ++A  +F  L+ S   +P+V TY  MI    R   L RAE L   M
Sbjct: 17  YNIIIHGLCKAGKFDEAGNIFTNLLIS-GLQPDVQTYNMMI----RFSSLGRAEKLYAEM 71

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
             +GL+P+T TY ++I G CK     +A            S +  T+N +++G CK  RV
Sbjct: 72  IRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRV 122

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTL 502
           ++   +  + +  G+ A+ +TY  LI    +  D   AL +F +M  +G+     ++  +
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDI 182

Query: 503 IAVFCREKRMSES 515
           +   C  K + ++
Sbjct: 183 LPQLCSRKELRKA 195



 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 102/197 (51%), Gaps = 14/197 (7%)

Query: 288 FTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 347
           +  +I GLCK G   +A  +   ++  G +P+V T+  +I      G  EK   L+ +++
Sbjct: 17  YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEK---LYAEMI 72

Query: 348 RSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNF 407
           R     P+ +TY +MI+G C+ +KL +A         + +  + +T+ TLI+G+CKA   
Sbjct: 73  R-RGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRV 122

Query: 408 ERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNIL 467
           +   +L   M R G   N+ TY  ++ G  + G    A  + ++   NG+ +  +T+  +
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDI 182

Query: 468 ISEHCKQADIKQALALF 484
           + + C + ++++A+A+ 
Sbjct: 183 LPQLCSRKELRKAVAML 199



 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 13/208 (6%)

Query: 344 LKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCK 403
            K++R  N   +   Y  +I+G C+  K + A  +   +   GL P+  TY  +I    +
Sbjct: 2   FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----R 57

Query: 404 AGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVT 463
             +  RA  L   M R G  P+  TYN+++ GLCK+ ++ +A K+ K            T
Sbjct: 58  FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSC---------ST 108

Query: 464 YNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAV 523
           +N LI+ +CK   +K  + LF +M + GI  ++ +YTTLI  F +    + +   F+E V
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168

Query: 524 RFGFIPTKRTYTSMICGYCREGNLTMAI 551
             G   +  T+  ++   C    L  A+
Sbjct: 169 SNGVYSSSITFRDILPQLCSRKELRKAV 196



 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 15/227 (6%)

Query: 413 LMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHC 472
           +  +M       +   YN I+ GLCK G+  EA  +  +   +GL+ D  TYN++I    
Sbjct: 1   MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56

Query: 473 KQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKR 532
           + + + +A  L+++M + G+ PD  +Y ++I   C++ +++++    +            
Sbjct: 57  RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSC---------S 107

Query: 533 TYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEARGLYDSM 592
           T+ ++I GYC+   +   +  F  M   G V + I Y TLI G  +    + A  ++  M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167

Query: 593 IEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTATTL 639
           +  G+    +T   +  + C   +   A+ +L  L+K   +    TL
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML--LQKSSMVSNNVTL 212



 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 14/213 (6%)

Query: 202 LFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFC 261
           +F+ M    +  D+A Y +++   CK G   EA    + +L  G   D  ++ ++I  F 
Sbjct: 1   MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RFS 59

Query: 262 EKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVY 321
             G   RA + + +    GL P+ I + SMI GLCK+  + QA ++           +  
Sbjct: 60  SLG---RAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCS 107

Query: 322 THTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGR 381
           T   LI+G CK    +    LF ++ R      NV+TYT +I+G+ +    N A  +   
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYR-RGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166

Query: 382 MKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLM 414
           M   G+  ++ T+  ++   C      +A  ++
Sbjct: 167 MVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199



 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 13/195 (6%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           ++    + G+  EA  +   +   G+ P+ QT N++++ +     +  A+ L+ EM  RG
Sbjct: 20  IIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS----LGRAEKLYAEMIRRG 75

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
           + PD+ +Y  M+   CK   + +A K              ++F  +I+ +C+       +
Sbjct: 76  LVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFNTLINGYCKATRVKDGM 126

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGL 330
             F +    G+  N+I +T++I G  + G    A ++ +EMV  G   +  T   ++  L
Sbjct: 127 NLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQL 186

Query: 331 CKKGWTEKAFRLFLK 345
           C +    KA  + L+
Sbjct: 187 CSRKELRKAVAMLLQ 201



 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 16/223 (7%)

Query: 171 MHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGN 230
           M    M  +T   N+++   C+ G  D A  +F  +   G+ PD  +Y +M+    +  +
Sbjct: 5   MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60

Query: 231 VLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTS 290
           +  A+K  + M+ RG + D  ++  +I   C++    +A +     S          F +
Sbjct: 61  LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS---------TFNT 111

Query: 291 MIEGLCKRGSIKQAFEMLEEMVCQGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 350
           +I G CK   +K    +  EM  +G   NV T+T LI G  + G    A  +F ++V S 
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV-SN 170

Query: 351 NNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNT 393
               + +T+  ++   C   +L +A  +L  +++  ++ N  T
Sbjct: 171 GVYSSSITFRDILPQLCSRKELRKAVAML--LQKSSMVSNNVT 211



 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 34/206 (16%)

Query: 483 LFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIPTKRTYTSMICGYC 542
           +F  M +S +  D   Y  +I   C+  +  E+   F   +  G  P  +TY  MI    
Sbjct: 1   MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56

Query: 543 REGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKLDEAR---------------- 586
           R  +L  A K +  M   G VPD+I Y ++I GLCKQ+KL +AR                
Sbjct: 57  RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGY 116

Query: 587 ----------GLYDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKKLWIRTA 636
                      L+  M  +G++   +T  TL + + ++ D  +A+ I   +       ++
Sbjct: 117 CKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSS 176

Query: 637 TT---LVRKLCSERKVGMA-ALFFHK 658
            T   ++ +LCS +++  A A+   K
Sbjct: 177 ITFRDILPQLCSRKELRKAVAMLLQK 202



 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 14/176 (7%)

Query: 133 TSLIGNGNLQKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACE 192
           T+L+ +G LQ   +    M+R F+ +GR   A ++  EM  +G+VP+T T N ++   C+
Sbjct: 38  TNLLISG-LQPDVQTYNMMIR-FSSLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCK 92

Query: 193 MGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNAS 252
                 AQ       AR V    +++  ++  YCK   V +       M  RG + +  +
Sbjct: 93  QN--KLAQ-------ARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVIT 143

Query: 253 FTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEGLCKRGSIKQAFEML 308
           +T +I  F + G    AL  F +    G+  + I F  ++  LC R  +++A  ML
Sbjct: 144 YTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199


>AT4G20770.1 | Symbols:  | Pentatricopeptide repeat (PPR)
           superfamily protein | chr4:11130762-11133086 REVERSE
           LENGTH=774
          Length = 774

 Score = 95.9 bits (237), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 199/475 (41%), Gaps = 53/475 (11%)

Query: 175 GMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLEA 234
           GM  +T   N ++ +  E G  DYA+ +F+EMS R V+    S+   +   CK+G++ EA
Sbjct: 36  GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVY----SWNAFLTFRCKVGDLGEA 91

Query: 235 DKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIEG 294
            +    M +R    D  S+  +IS    KGF  +AL  + +    G  P+     S++  
Sbjct: 92  CEVFDGMPER----DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSA 147

Query: 295 LCKRGSIKQAFEMLEEMVC--QGWKPNVYTHTALIDGLCKKGW-TEKAFRLFLKLVRSEN 351
             K   +   F M    V    G   N++   AL+    K G+  +   R+F  L     
Sbjct: 148 CSK--VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL----- 200

Query: 352 NKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLI---------DGHC 402
           ++PN ++YTA+I G  R++K+  A  +   M E+G+  ++   + ++         D   
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 260

Query: 403 KAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKV 462
           +    E    +  L  R GF  ++   N++++   K   +  A  +    F    E + V
Sbjct: 261 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELI----FAEMPEVNVV 316

Query: 463 TYNILISEHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEA 522
           ++NI+I    ++    +++   ++M  SG QP+  +  +++    R   +      F   
Sbjct: 317 SWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376

Query: 523 VRFGFIPTKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCVPDSIAYGTLISGLCKQSKL 582
            +    P+   + +M+ GY    +   AI  F +M      PD      ++S   +   L
Sbjct: 377 PQ----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFL 432

Query: 583 DEARGLY----------DSMIEKGLIP----CEVTRITLAYEYCKIDDCCSAMVI 623
           +  + ++          +S I  GLI     CE   I+     C  DDC + + I
Sbjct: 433 EGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEIS----ECIFDDCINELDI 483



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/516 (19%), Positives = 218/516 (42%), Gaps = 59/516 (11%)

Query: 175 GMVPNTQTLNLVMKIACEMG-LVDYAQYLFEEMSARGVHPDSASYRVMVVAYCKMGNVLE 233
           G+  N    N ++ +  + G +VDY   +FE +S     P+  SY  ++    +   VLE
Sbjct: 168 GLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS----QPNEVSYTAVIGGLARENKVLE 223

Query: 234 ADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRALRYFHKFSDMGLKPNLINFTSMIE 293
           A +   +M ++G  VD+   +                             N+++ ++  E
Sbjct: 224 AVQMFRLMCEKGVQVDSVCLS-----------------------------NILSISAPRE 254

Query: 294 GLCKRGSIKQAFEMLEEMVCQ----GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 349
           G C   S     E+ +++ C     G+  +++ + +L++   K      A     +L+ +
Sbjct: 255 G-CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGA-----ELIFA 308

Query: 350 ENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRMKEQGLIPNTNTYTTLIDGHCKAGNFER 409
           E  + NV+++  MI G+ ++ + +++   L RM++ G  PN  T  +++    ++G+ E 
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 368

Query: 410 AFDLMNLMSREGFSPNICTYNAIVDGLCKKGRVQEAYKMLKDGFHNGLEADKVTYNILIS 469
              + + + +    P++  +NA++ G       +EA    +      L+ DK T ++++S
Sbjct: 369 GRRIFSSIPQ----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILS 424

Query: 470 EHCKQADIKQALALFSKMAKSGIQPDIHSYTTLIAVFCREKRMSESEMFFEEAVRFGFIP 529
              +   ++    +   + ++ I  + H  + LIAV+   ++M  SE  F++ +    I 
Sbjct: 425 SCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIA 484

Query: 530 TKRTYTSMICGYCREGNLTMAIKFFHRMSDHGCV-PDSIAYGTLISGLCKQSKLDEARGL 588
               + SMI G+      T A+  F RM     + P+  ++ T++S   +   L   R  
Sbjct: 485 ---CWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541

Query: 589 YDSMIEKGLIPCEVTRITLAYEYCKIDDCCSAMVILDRLEKK---LWIRTATTLVRKLCS 645
           +  +++ G +        L   YCK  +  SA    D + +K   +W             
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRG 601

Query: 646 ERKVGMAALFFHKLLDMDFHVNRVTLAAFMTACYES 681
           +  VG+    + K++      + +T  + +TAC  S
Sbjct: 602 DEAVGL----YRKMISSGEKPDGITFVSVLTACSHS 633



 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 152/352 (43%), Gaps = 17/352 (4%)

Query: 142 QKAHEVMQCMVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQY 201
           Q +      M+  ++     +EA+    +M  Q + P+  TL++++     +  ++  + 
Sbjct: 378 QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437

Query: 202 LFEEMSARGVHPDS--ASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISE 259
           +   +    +  +S   S  + V + C+   + E      +  D    +D A +  +IS 
Sbjct: 438 IHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC-----IFDDCINELDIACWNSMISG 492

Query: 260 FCEKGFATRALRYFHKFSDMG-LKPNLINFTSMIEGLCKRGSIKQAFEMLEEMVCQGWKP 318
           F      T+AL  F +      L PN  +F +++    +  S+    +    +V  G+  
Sbjct: 493 FRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS 552

Query: 319 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEML 378
           + +  TAL D  CK G  + A + F  ++R      N + +  MI+GY  + + + A  L
Sbjct: 553 DSFVETALTDMYCKCGEIDSARQFFDAVLR-----KNTVIWNEMIHGYGHNGRGDEAVGL 607

Query: 379 LGRMKEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSR-EGFSPNICTYNAIVDGLC 437
             +M   G  P+  T+ +++     +G  E   ++++ M R  G  P +  Y  IVD L 
Sbjct: 608 YRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLG 667

Query: 438 KKGRVQEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAK 489
           + GR+++A K+ +       ++  V + IL+S      D+  A  +  K+ +
Sbjct: 668 RAGRLEDAEKLAE---ATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMR 716



 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/379 (19%), Positives = 154/379 (40%), Gaps = 28/379 (7%)

Query: 151 MVRSFAEIGRLKEAVEMVFEMHNQGMVPNTQTLNLVMKIACEMGLVDYAQYLFEEMSARG 210
           M+  F +  R  ++VE +  M + G  PN  T   V+      G V+  + +F  +    
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP--- 377

Query: 211 VHPDSASYRVMVVAYCKMGNVLEADKWLSVMLDRGFLVDNASFTLIISEFCEKGFATRAL 270
             P  +++  M+  Y    +  EA      M  +    D  + ++I+S  C +    R L
Sbjct: 378 -QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS-CAR---LRFL 432

Query: 271 RYFHKFSDMGLKPNLINFTSMIEGL------CKRGSIKQAF--EMLEEMVCQGWKPNVYT 322
               +   + ++  +   + ++ GL      C++  I +    + + E+    W      
Sbjct: 433 EGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACW------ 486

Query: 323 HTALIDGLCKKGWTEKAFRLFLKLVRSENNKPNVLTYTAMINGYCRDDKLNRAEMLLGRM 382
             ++I G        KA  LF ++ ++    PN  ++  +++   R   L       G +
Sbjct: 487 -NSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV 545

Query: 383 KEQGLIPNTNTYTTLIDGHCKAGNFERAFDLMNLMSREGFSPNICTYNAIVDGLCKKGRV 442
            + G + ++   T L D +CK G  + A    + + R+    N   +N ++ G    GR 
Sbjct: 546 VKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRK----NTVIWNEMIHGYGHNGRG 601

Query: 443 QEAYKMLKDGFHNGLEADKVTYNILISEHCKQADIKQALALFSKMAK-SGIQPDIHSYTT 501
            EA  + +    +G + D +T+  +++       ++  L + S M +  GI+P++  Y  
Sbjct: 602 DEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYIC 661

Query: 502 LIAVFCREKRMSESEMFFE 520
           ++    R  R+ ++E   E
Sbjct: 662 IVDCLGRAGRLEDAEKLAE 680