Miyakogusa Predicted Gene

Lj3g3v2437560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2437560.1 Non Chatacterized Hit- tr|K4CSX9|K4CSX9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.65,3e-18,seg,NULL; Rhodanese/Cell cycle control
phosphatase,Rhodanese-like domain; CHITINASE,NULL; no
descrip,CUFF.43999.1
         (456 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G01050.1 | Symbols: TROL | thylakoid rhodanese-like | chr4:45...   425   e-119
AT3G25480.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...    97   3e-20

>AT4G01050.1 | Symbols: TROL | thylakoid rhodanese-like |
           chr4:455874-458175 FORWARD LENGTH=466
          Length = 466

 Score =  425 bits (1092), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/470 (53%), Positives = 314/470 (66%), Gaps = 38/470 (8%)

Query: 1   MEALNAAGLTPLSVLSDARKQPRKFSSHPTISACKVSNFSTSTTKKRTFQECLSTGLHGG 60
           MEAL  A  +P+SVLS+ R +PRK  S P +   K        +++   QE      +GG
Sbjct: 1   MEALKTATFSPMSVLSEKRSEPRKPFSLPNLFPPK--------SQRPISQESFLKRFNGG 52

Query: 61  LILAASVVNSGIA--KALTYEEALGQSMNPKISNSGDFDANGFVESVASFAGENXXXXXX 118
           L L  SV++S  A  K+LTYEEAL QSM    + S  FD++G +E +++F  +N      
Sbjct: 53  LALLTSVLSSATAPAKSLTYEEALQQSM----TTSSSFDSDGLIEGISNFVTDNPLVIAG 108

Query: 119 XXXXXXXXXXXSQVL-KKPKAWGVESAKNAYVKLGADGSAQLLDIRAPVEIRQVGTPDVG 177
                      SQVL KKPK+WGVESAKNAY KLG D +AQLLDIRA  + RQVG+P++ 
Sbjct: 109 GVAALAVPFVLSQVLNKKPKSWGVESAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIK 168

Query: 178 GLKKKPVAIAYKGDDKPGFLKKLSLKFKEPENTTLFVLDKFDGNSELVAELVTLNGFKAA 237
           GL KK V+  Y G+DKPGFLKKLSLKFK+PENTTL++LDKFDGNSELVAELV LNGFK+A
Sbjct: 169 GLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDKFDGNSELVAELVALNGFKSA 228

Query: 238 YAIKDGAEGPRGWTNSGLPWIAPKKALSLDFGNLTDVINDALGDTSDGLPVTLGIVAATG 297
           YAIKDGAEGPRGW NS LPWI PKK LSLD  +LTD I+   G++SDG+ V LG+ AA G
Sbjct: 229 YAIKDGAEGPRGWLNSSLPWIEPKKTLSLDLSSLTDSISGVFGESSDGVSVALGVAAAAG 288

Query: 298 LGLLAFSEIETILQLVGSAALVQFASKKLLFAEDRKKTLQQVDEFLTTKVAPKELADEIK 357
           L + AF+EIETILQL+GSAALVQ A KKLLFAEDRK+TL+QVDEFL TKVAPKEL DE+K
Sbjct: 289 LSVFAFTEIETILQLLGSAALVQLAGKKLLFAEDRKQTLKQVDEFLNTKVAPKELVDELK 348

Query: 358 QIGKALLPTSTNDKALPAP-TEQSPALATAESTVQIAEAAPD------------------ 398
           +IGKALLP ST++KALPAP T  + A +   +T  + +  P+                  
Sbjct: 349 EIGKALLPQSTSNKALPAPATVTAEAESATATTTTVDKPVPEPETVAATTTTVDKPVPEP 408

Query: 399 --TVSEPKVDVVAASLAPEINSVPKTEDKAEPVPKQPKSLSPYPYYPDFK 446
                   V  + A++A ++ + P TE +A+P P   + LSPY  YPD K
Sbjct: 409 EPVPEPVPVPAIEAAVAAQVITEP-TETEAKPKP-HSRPLSPYASYPDLK 456


>AT3G25480.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr3:9235591-9236598 REVERSE
           LENGTH=264
          Length = 264

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 66/108 (61%)

Query: 143 SAKNAYVKLGADGSAQLLDIRAPVEIRQVGTPDVGGLKKKPVAIAYKGDDKPGFLKKLSL 202
           SA NA+ KL  +  +QLLDIR    +  + +P++  L K  V + +  +D+ GFL K+  
Sbjct: 122 SAMNAFRKLKNESDSQLLDIRDVKTLALLASPNLKFLGKSSVQVPFSENDEEGFLTKVKG 181

Query: 203 KFKEPENTTLFVLDKFDGNSELVAELVTLNGFKAAYAIKDGAEGPRGW 250
            F + ENT + VLD FDGNS  VAEL+  NGFK AY I+ GA G  GW
Sbjct: 182 SFSDAENTVVCVLDNFDGNSSKVAELLIKNGFKEAYYIRGGARGKNGW 229