Miyakogusa Predicted Gene
- Lj3g3v2415310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2415310.1 Non Chatacterized Hit- tr|I1JRY6|I1JRY6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2677
PE=,82.63,0,coiled-coil,NULL; GH3,GH3 auxin-responsive promoter;
seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.43979.1
(339 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46370.4 | Symbols: JAR1 | Auxin-responsive GH3 family protei... 468 e-132
AT2G46370.2 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 famil... 465 e-131
AT2G46370.1 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 famil... 465 e-131
AT2G46370.3 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 famil... 373 e-104
AT4G03400.1 | Symbols: DFL2, GH3-10 | Auxin-responsive GH3 famil... 310 7e-85
AT4G27260.1 | Symbols: GH3.5, WES1 | Auxin-responsive GH3 family... 222 2e-58
AT1G48660.1 | Symbols: | Auxin-responsive GH3 family protein | ... 207 8e-54
AT5G54510.1 | Symbols: GH3.6, DFL1 | Auxin-responsive GH3 family... 207 8e-54
AT5G13320.1 | Symbols: PBS3, GDG1, WIN3, GH3.12 | Auxin-responsi... 207 9e-54
AT2G14960.1 | Symbols: GH3.1 | Auxin-responsive GH3 family prote... 204 7e-53
AT2G23170.1 | Symbols: GH3.3 | Auxin-responsive GH3 family prote... 203 1e-52
AT1G23160.1 | Symbols: | Auxin-responsive GH3 family protein | ... 202 2e-52
AT4G37390.1 | Symbols: YDK1, GH3.2, BRU6, GH3-2, AUR3 | Auxin-re... 198 6e-51
AT5G51470.1 | Symbols: | Auxin-responsive GH3 family protein | ... 197 8e-51
AT5G13350.1 | Symbols: | Auxin-responsive GH3 family protein | ... 188 4e-48
AT1G28130.1 | Symbols: GH3.17 | Auxin-responsive GH3 family prot... 187 9e-48
AT2G47750.1 | Symbols: GH3.9 | putative indole-3-acetic acid-ami... 185 3e-47
AT1G59500.1 | Symbols: GH3.4 | Auxin-responsive GH3 family prote... 184 7e-47
AT5G13360.2 | Symbols: | Auxin-responsive GH3 family protein | ... 176 2e-44
AT5G13360.1 | Symbols: | Auxin-responsive GH3 family protein | ... 176 2e-44
AT5G13360.3 | Symbols: | Auxin-responsive GH3 family protein | ... 176 2e-44
AT5G13370.1 | Symbols: | Auxin-responsive GH3 family protein | ... 176 3e-44
AT5G13380.1 | Symbols: | Auxin-responsive GH3 family protein | ... 171 9e-43
AT1G48670.1 | Symbols: | auxin-responsive GH3 family protein | ... 150 8e-37
AT1G28130.2 | Symbols: GH3.17 | Auxin-responsive GH3 family prot... 118 7e-27
AT1G48690.1 | Symbols: | Auxin-responsive GH3 family protein | ... 86 4e-17
>AT2G46370.4 | Symbols: JAR1 | Auxin-responsive GH3 family protein |
chr2:19034233-19036369 FORWARD LENGTH=586
Length = 586
Score = 468 bits (1203), Expect = e-132, Method: Compositional matrix adjust.
Identities = 220/339 (64%), Positives = 269/339 (79%), Gaps = 4/339 (1%)
Query: 5 KMLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGR-TDPE- 62
KMLEKVE FDM++VI+EF+ +T++A VQ++TLK IL +N SA YLQ+ GLNG TDPE
Sbjct: 11 KMLEKVETFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATDPEE 70
Query: 63 SFKSCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFE 122
+FKS +PLVT ELEP+I RM+DGD SPILTG P+ A+SLSSGT+ G+ K++P+ DEL E
Sbjct: 71 AFKSMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELME 130
Query: 123 TTLQIYHTAFAHRNREFPI--NGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSM 180
TLQ++ TAFA RNR+FPI NGKAL FI+SSK + NV+RNP FK M
Sbjct: 131 NTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGM 190
Query: 181 KALKSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWE 240
K++ S CSPDEVIF PD HQ+LYCHLL G++FR++VQ V + FAH +++AFRTFEQVWE
Sbjct: 191 KSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWE 250
Query: 241 ELCADIREGVLNRSIVVPSIRTAMSKLLKPDPELANLIKRKCLGLSNWYGLIPELFPNAK 300
E+ DI++GVL+ I VPS+RTAMSKLL P+PELA I+ KC+ LSNWYGLIP LFPNAK
Sbjct: 251 EIVTDIKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAK 310
Query: 301 YVYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSEGWIA 339
YVYGIMTGSMEPY+ KLRHYAG LPLV+ DYGSSEGWIA
Sbjct: 311 YVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIA 349
>AT2G46370.2 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 family
protein | chr2:19034342-19036369 FORWARD LENGTH=575
Length = 575
Score = 465 bits (1197), Expect = e-131, Method: Compositional matrix adjust.
Identities = 219/338 (64%), Positives = 268/338 (79%), Gaps = 4/338 (1%)
Query: 6 MLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGR-TDPE-S 63
MLEKVE FDM++VI+EF+ +T++A VQ++TLK IL +N SA YLQ+ GLNG TDPE +
Sbjct: 1 MLEKVETFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATDPEEA 60
Query: 64 FKSCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFET 123
FKS +PLVT ELEP+I RM+DGD SPILTG P+ A+SLSSGT+ G+ K++P+ DEL E
Sbjct: 61 FKSMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 120
Query: 124 TLQIYHTAFAHRNREFPI--NGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMK 181
TLQ++ TAFA RNR+FPI NGKAL FI+SSK + NV+RNP FK MK
Sbjct: 121 TLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMK 180
Query: 182 ALKSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEE 241
++ S CSPDEVIF PD HQ+LYCHLL G++FR++VQ V + FAH +++AFRTFEQVWEE
Sbjct: 181 SITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEE 240
Query: 242 LCADIREGVLNRSIVVPSIRTAMSKLLKPDPELANLIKRKCLGLSNWYGLIPELFPNAKY 301
+ DI++GVL+ I VPS+RTAMSKLL P+PELA I+ KC+ LSNWYGLIP LFPNAKY
Sbjct: 241 IVTDIKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKY 300
Query: 302 VYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSEGWIA 339
VYGIMTGSMEPY+ KLRHYAG LPLV+ DYGSSEGWIA
Sbjct: 301 VYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIA 338
>AT2G46370.1 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 family
protein | chr2:19034342-19036369 FORWARD LENGTH=575
Length = 575
Score = 465 bits (1197), Expect = e-131, Method: Compositional matrix adjust.
Identities = 219/338 (64%), Positives = 268/338 (79%), Gaps = 4/338 (1%)
Query: 6 MLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGR-TDPE-S 63
MLEKVE FDM++VI+EF+ +T++A VQ++TLK IL +N SA YLQ+ GLNG TDPE +
Sbjct: 1 MLEKVETFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATDPEEA 60
Query: 64 FKSCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFET 123
FKS +PLVT ELEP+I RM+DGD SPILTG P+ A+SLSSGT+ G+ K++P+ DEL E
Sbjct: 61 FKSMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 120
Query: 124 TLQIYHTAFAHRNREFPI--NGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMK 181
TLQ++ TAFA RNR+FPI NGKAL FI+SSK + NV+RNP FK MK
Sbjct: 121 TLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMK 180
Query: 182 ALKSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEE 241
++ S CSPDEVIF PD HQ+LYCHLL G++FR++VQ V + FAH +++AFRTFEQVWEE
Sbjct: 181 SITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEE 240
Query: 242 LCADIREGVLNRSIVVPSIRTAMSKLLKPDPELANLIKRKCLGLSNWYGLIPELFPNAKY 301
+ DI++GVL+ I VPS+RTAMSKLL P+PELA I+ KC+ LSNWYGLIP LFPNAKY
Sbjct: 241 IVTDIKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKY 300
Query: 302 VYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSEGWIA 339
VYGIMTGSMEPY+ KLRHYAG LPLV+ DYGSSEGWIA
Sbjct: 301 VYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIA 338
>AT2G46370.3 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 family
protein | chr2:19034579-19036369 FORWARD LENGTH=496
Length = 496
Score = 373 bits (958), Expect = e-104, Method: Compositional matrix adjust.
Identities = 170/259 (65%), Positives = 205/259 (79%), Gaps = 2/259 (0%)
Query: 83 MIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRNREFPI- 141
M+DGD SPILTG P+ A+SLSSGT+ G+ K++P+ DEL E TLQ++ TAFA RNR+FPI
Sbjct: 1 MVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFPID 60
Query: 142 -NGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSCCSPDEVIFGPDFH 200
NGKAL FI+SSK + NV+RNP FK MK++ S CSPDEVIF PD H
Sbjct: 61 DNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVH 120
Query: 201 QSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREGVLNRSIVVPSI 260
Q+LYCHLL G++FR++VQ V + FAH +++AFRTFEQVWEE+ DI++GVL+ I VPS+
Sbjct: 121 QALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLSNRITVPSV 180
Query: 261 RTAMSKLLKPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKKLRHY 320
RTAMSKLL P+PELA I+ KC+ LSNWYGLIP LFPNAKYVYGIMTGSMEPY+ KLRHY
Sbjct: 181 RTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHY 240
Query: 321 AGVLPLVTSDYGSSEGWIA 339
AG LPLV+ DYGSSEGWIA
Sbjct: 241 AGDLPLVSHDYGSSEGWIA 259
>AT4G03400.1 | Symbols: DFL2, GH3-10 | Auxin-responsive GH3 family
protein | chr4:1497675-1499729 REVERSE LENGTH=591
Length = 591
Score = 310 bits (795), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 12/340 (3%)
Query: 12 EFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQS-LG------LNGRTDPESF 64
E D VI FE ++++A VQ ETL+RILE N+ EYL+ LG ++ T F
Sbjct: 5 EAGHDDVIGWFEHVSENACKVQSETLRRILELNSGVEYLRKWLGTVDVEKMDDYTLETLF 64
Query: 65 KSCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETT 124
S +P+V+H +L+P+I R+ DG+ SP+LT +PIT +SLSSGTT G+QKYVP+ +TT
Sbjct: 65 TSLVPIVSHADLDPYIQRIADGETSPLLTQEPITVLSLSSGTTEGRQKYVPFTRHSAQTT 124
Query: 125 LQIYHTAFAHRNREFPI--NGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKA 182
LQI+ + A+R+R +PI G+ L FIY+ K F + + + FK +
Sbjct: 125 LQIFRLSAAYRSRFYPIREGGRILEFIYAGKEFKTLGGLTVGTATTHYYASEEFKTKQET 184
Query: 183 LKSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEEL 242
KS CSP EVI G DF Q YCHLL GL + +V+ V+S F+++I+ AF FE++W E+
Sbjct: 185 TKSFTCSPQEVISGGDFGQCTYCHLLLGLHYSSQVEFVASAFSYTIVQAFSFFEEIWREI 244
Query: 243 CADIREGVLNRSIVVPSIRTAMSKLLKPDPELANLIKRKCLGLSN---WYGLIPELFPNA 299
CADI+EG L+ I +P +R A+ L++P+P LA+ I+ CL L W+GLI +L+PNA
Sbjct: 245 CADIKEGNLSSRITLPKMRKAVLALIRPNPSLASHIEEICLELETNLGWFGLISKLWPNA 304
Query: 300 KYVYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSEGWIA 339
K++ IMTGSM PYL KLRHYAG LPLV++DYGS+E WI
Sbjct: 305 KFISSIMTGSMLPYLNKLRHYAGGLPLVSADYGSTESWIG 344
>AT4G27260.1 | Symbols: GH3.5, WES1 | Auxin-responsive GH3 family
protein | chr4:13653704-13655892 FORWARD LENGTH=612
Length = 612
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 195/340 (57%), Gaps = 9/340 (2%)
Query: 8 EKVEEFDM------DKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDP 61
E +E FD+ + ++ E LT +A+ VQR+ L+ IL NA EYL+ LNGRTD
Sbjct: 8 ESLEVFDLTLDQKNKQKLQLIEELTSNADQVQRQVLEEILTRNADVEYLRRHDLNGRTDR 67
Query: 62 ESFKSCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELF 121
E+FK+ +P++T++++EP INR+ +GD SPIL+ KPI+ SSGT+ G++K +P +E
Sbjct: 68 ETFKNIMPVITYEDIEPEINRIANGDKSPILSSKPISEFLTSSGTSGGERKLMPTIEEEL 127
Query: 122 ETTLQIYHTAFAHRNREFP--INGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPS 179
+ +Y ++ P NGK + F++ + +++ FK
Sbjct: 128 DRRSLLYSLLMPVMSQFVPGLENGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKER 187
Query: 180 MKALKSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVW 239
++ SP+E I D +QS+Y +LCGL +EV V + FA I A + E+ W
Sbjct: 188 PYDPYTNYTSPNETILCSDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAIKFLEKHW 247
Query: 240 EELCADIREGVLNRSIVVPSIRTAMSKLLKPDPELANLIKRKCLGLSNWYGLIPELFPNA 299
EL DIR G L+ I PS+R A++K+LKP P+LA+ ++ +C S+W G+I L+PN
Sbjct: 248 IELVRDIRTGTLSSLITDPSVREAVAKILKPSPKLADFVEFEC-KKSSWQGIITRLWPNT 306
Query: 300 KYVYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSEGWIA 339
KYV I+TG+M Y+ L +Y+ LPLV + Y SSE +
Sbjct: 307 KYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFG 346
>AT1G48660.1 | Symbols: | Auxin-responsive GH3 family protein |
chr1:17995948-17997972 REVERSE LENGTH=573
Length = 573
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 185/319 (57%), Gaps = 4/319 (1%)
Query: 19 IEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKELEP 78
+++ E LT +A+ +Q + LK IL NA+ EYL+ L+G +D E FK +P+V++ +++P
Sbjct: 7 LKDLEVLTTNAKQIQDDVLKEILTLNANTEYLKRF-LDGSSDKELFKKNVPVVSYNDVKP 65
Query: 79 FINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYH-TAFAHRNR 137
+I R+ +G+ S +++G IT S+GT+ G K P ND+ E + ++ N
Sbjct: 66 YIERVANGEPSDVISGGTITRFVQSTGTSGGIHKIFPVNDKYIENLGYLLAVSSLITSND 125
Query: 138 EFPINGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSCCSPDEVIFGP 197
+ GK ++F+Y+ + F + FK S SPD+VI P
Sbjct: 126 KVDEKGKKMAFLYNRLESKTPSGLALSSSFTSYFMSDYFKNRSSKCNSEYTSPDQVILCP 185
Query: 198 DFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREGVLNRSIVV 257
D +QS+YCHLLCGL RE+V VS+TFAH++I A + W+EL ++IR G ++ I
Sbjct: 186 DNNQSVYCHLLCGLSQREKVVGVSATFAHALIKAINALQIYWKELSSNIRSGHVSEWITD 245
Query: 258 PSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKK 316
+ A+S +L PDPELA++I+++C +W G+I L+P AK++ I+TG M Y+
Sbjct: 246 LDCKNAVSAILGGPDPELADVIEQEC-SHKSWEGIITRLWPKAKFIECIVTGQMAQYIPT 304
Query: 317 LRHYAGVLPLVTSDYGSSE 335
L Y+ LP+V+ YGSSE
Sbjct: 305 LDFYSNKLPIVSMVYGSSE 323
>AT5G54510.1 | Symbols: GH3.6, DFL1 | Auxin-responsive GH3 family
protein | chr5:22131321-22133564 REVERSE LENGTH=612
Length = 612
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 178/320 (55%), Gaps = 3/320 (0%)
Query: 22 FERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKELEPFIN 81
E +T +A+ VQR L+ IL NA EYL+ GL GRTD E+FK +P+VT+++++P IN
Sbjct: 28 IEDVTTNADDVQRRVLEEILSRNADVEYLKRHGLEGRTDRETFKHIMPVVTYEDIQPEIN 87
Query: 82 RMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRNREFP- 140
R+ +GD S +L PI+ SSGT+ G++K +P +E + +Y ++ P
Sbjct: 88 RIANGDKSQVLCSNPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMDQFVPG 147
Query: 141 -INGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSCCSPDEVIFGPDF 199
GK + F++ + +++ FK ++ SP++ I D
Sbjct: 148 LDKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPYDPYTNYTSPNQTILCSDS 207
Query: 200 HQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREGVLNRSIVVPS 259
+QS+Y +LCGL +EV V + FA I A + E+ W EL DIR G L+ I S
Sbjct: 208 YQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIKFLEKHWPELARDIRTGTLSSEITDSS 267
Query: 260 IRTAMSKLLKPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKKLRH 319
+R A+ ++LKPDP+LA+ ++ +C S W G+I L+PN KYV I+TG+M Y+ L +
Sbjct: 268 VREAVGEILKPDPKLADFVESECRKTS-WQGIITRLWPNTKYVDVIVTGTMSQYIPTLDY 326
Query: 320 YAGVLPLVTSDYGSSEGWIA 339
Y+ LPLV + Y SSE +
Sbjct: 327 YSNGLPLVCTMYASSECYFG 346
>AT5G13320.1 | Symbols: PBS3, GDG1, WIN3, GH3.12 | Auxin-responsive
GH3 family protein | chr5:4268902-4270896 FORWARD
LENGTH=575
Length = 575
Score = 207 bits (527), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 187/327 (57%), Gaps = 6/327 (1%)
Query: 13 FDMDKVIE-EFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLV 71
FD+++ E + + LT + + +Q L+ I+ N EYLQ L R D E FK +P+V
Sbjct: 5 FDINETFEKQLKDLTSNVKSIQDNLLEEIITPNTKTEYLQRF-LIDRFDKELFKKNVPIV 63
Query: 72 THKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIY--H 129
++++++P+++R+++G++S +++ + IT LSSGT+ G QK +PWN++ + IY
Sbjct: 64 SYEDIKPYLDRVVNGESSDVISARTITGFLLSSGTSGGAQKMMPWNNKYLDNLTFIYDLR 123
Query: 130 TAFAHRNREFPINGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSCCS 189
++ + GK + F+++ + + F++ FK S S
Sbjct: 124 MQVITKHVKGVEEGKGMMFLFTKQESMTPSGLPARVATSSYFKSDYFKNRPSNWYYSYTS 183
Query: 190 PDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREG 249
PDEVI P+ +SLYCHLLCGL+ R+EV S FA ++ A + WEELC++IR G
Sbjct: 184 PDEVILCPNNTESLYCHLLCGLVQRDEVVRTGSIFASVMVRAIEVLKNSWEELCSNIRSG 243
Query: 250 VLNRSIVVPSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTG 308
L+ + + ++S +L P PELA+ I+ C ++W G++ L+PN KY+ ++TG
Sbjct: 244 HLSNWVTDLGCQNSVSLVLGGPRPELADTIEEIC-NQNSWKGIVKRLWPNTKYIETVVTG 302
Query: 309 SMEPYLKKLRHYAGVLPLVTSDYGSSE 335
SM Y+ L +Y LPLV++ YGSSE
Sbjct: 303 SMGQYVPMLNYYCNDLPLVSTTYGSSE 329
>AT2G14960.1 | Symbols: GH3.1 | Auxin-responsive GH3 family protein
| chr2:6451659-6453670 REVERSE LENGTH=590
Length = 590
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 172/325 (52%), Gaps = 3/325 (0%)
Query: 17 KVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKEL 76
K + E +T++A+ VQ L IL NA EYL+ L G TD ++FK+ IP++T+++L
Sbjct: 21 KALRFIEEMTRNADTVQENLLAEILARNADTEYLRRFNLCGATDRDTFKTKIPVITYEDL 80
Query: 77 EPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRN 136
+P I R+ DGD SPIL+ PI+ SSGT++G++K +P E + +Y N
Sbjct: 81 QPEIQRIADGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMN 140
Query: 137 REFP--INGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSCCSPDEVI 194
P GK + F++ + +++ F+ + SP+E I
Sbjct: 141 LYVPGLDKGKGMYFLFVKSETKTPGGLPARPVLTSYYKSEHFRSRPYDPYNVYTSPNEAI 200
Query: 195 FGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREGVLNRS 254
PD QS+Y +LCGL+ R V V + FA ++ A R + W DI G L+
Sbjct: 201 LCPDSFQSMYTQMLCGLLDRLSVLRVGAVFASGLLRAIRFLQLHWSRFAHDIELGCLDSE 260
Query: 255 IVVPSIRTAMSKLLKPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPYL 314
I PSIR MS +LKPDP LA I+R+C NW +I ++PN KY+ I+TG+M Y+
Sbjct: 261 ITDPSIRQCMSGILKPDPVLAEFIRRECKS-DNWEKIITRIWPNTKYLDVIVTGAMAQYI 319
Query: 315 KKLRHYAGVLPLVTSDYGSSEGWIA 339
L +Y+G LP+ + Y SSE +
Sbjct: 320 PTLEYYSGGLPMACTMYASSECYFG 344
>AT2G23170.1 | Symbols: GH3.3 | Auxin-responsive GH3 family protein
| chr2:9864125-9866502 REVERSE LENGTH=595
Length = 595
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 180/326 (55%), Gaps = 3/326 (0%)
Query: 17 KVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKEL 76
K + E +T++ + VQ++ ++ IL N+ EYL+ GL G TD ++FK+ +P+V + +L
Sbjct: 21 KALRFIEEMTRNVDFVQKKVIREILSRNSDTEYLKRFGLKGFTDRKTFKTKVPVVIYDDL 80
Query: 77 EPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRN 136
+P I R+ +GD S IL+ PIT SSGT++G++K +P DE + +Y N
Sbjct: 81 KPEIQRIANGDRSMILSSYPITEFLTSSGTSAGERKLMPTIDEDMDRRQLLYSLLMPVMN 140
Query: 137 REFP--INGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSCCSPDEVI 194
P GKAL F++ + +++ FK + SP+E I
Sbjct: 141 LYVPGLDKGKALYFLFVKTESKTPGGLPARPVLTSYYKSEQFKRRPNDPYNVYTSPNEAI 200
Query: 195 FGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREGVLNRS 254
PD QS+Y +LCGL+ R EV + + FA ++ A + W+EL DI G L+
Sbjct: 201 LCPDSSQSMYTQMLCGLLMRHEVLRLGAVFASGLLRAIGFLQTNWKELADDISTGTLSSR 260
Query: 255 IVVPSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPY 313
I P+I+ +MSK+L KPD ELA+ I C ++W G+I +++PN KY+ I+TG+M Y
Sbjct: 261 ISDPAIKESMSKILTKPDQELADFITSVCGQDNSWEGIITKIWPNTKYLDVIVTGAMAQY 320
Query: 314 LKKLRHYAGVLPLVTSDYGSSEGWIA 339
+ L +Y+G LP+ + Y SSE +
Sbjct: 321 IPMLEYYSGGLPMACTMYASSESYFG 346
>AT1G23160.1 | Symbols: | Auxin-responsive GH3 family protein |
chr1:8209232-8211325 FORWARD LENGTH=578
Length = 578
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 176/318 (55%), Gaps = 6/318 (1%)
Query: 22 FERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKELEPFIN 81
E LT + +Q L+ IL NA+ YLQ L G D ESFK +P+VT+++++P+I
Sbjct: 18 LEDLTSNVTQIQDNVLEEILTLNANTNYLQKFFL-GSFDKESFKKNVPVVTYEDVKPYIE 76
Query: 82 RMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIY--HTAFAHRNREF 139
R+++G+ S +++ +PIT LS+GT+ G QK +PWN++ + +Y N +
Sbjct: 77 RVVNGEPSNVISARPITGFVLSTGTSGGAQKMMPWNEKYLDNLTFMYDLRMHIISNNVKD 136
Query: 140 PINGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSCCSPDEVIFGPDF 199
GKA+ F ++ + ++ FK S SPDEV PD
Sbjct: 137 VEKGKAMMFYFTKLESITPSGLPARVASSSYLKSNYFKNRPSNWYYSYTSPDEVTLCPDN 196
Query: 200 HQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREGVLNRSIVVPS 259
Q+LYCHLLCGL+ R EV + S FA ++ A + E WEELC++IR G L+ I
Sbjct: 197 KQNLYCHLLCGLVQRNEVTRMGSIFASVMVRAIKFLEDSWEELCSNIRSGQLSEWITDIG 256
Query: 260 IRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKKLR 318
R ++S +L P PE A+ I++ C W G+I L+P AKY+ I+TGSM Y+ L
Sbjct: 257 CRDSVSLVLGGPHPEAADTIEQIC-NQKCWKGIITRLWPKAKYIETIVTGSMVQYVPTLN 315
Query: 319 HYA-GVLPLVTSDYGSSE 335
+Y+ +LPL+++ Y SSE
Sbjct: 316 YYSNNMLPLISTIYASSE 333
>AT4G37390.1 | Symbols: YDK1, GH3.2, BRU6, GH3-2, AUR3 |
Auxin-responsive GH3 family protein |
chr4:17579722-17581768 FORWARD LENGTH=603
Length = 603
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 177/326 (54%), Gaps = 4/326 (1%)
Query: 17 KVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKEL 76
K ++ E +T++ + VQ + L IL N++ EYL+ L+G D ++FKS +P+VT+++L
Sbjct: 22 KALKFIEEMTRNPDSVQEKVLGEILTRNSNTEYLKRFDLDGVVDRKTFKSKVPVVTYEDL 81
Query: 77 EPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRN 136
+P I R+ +GD SPIL+ PIT SSGT++G++K +P +E + +Y N
Sbjct: 82 KPEIQRISNGDCSPILSSHPITEFLTSSGTSAGERKLMPTIEEDLDRRQLLYSLLMPVMN 141
Query: 137 REFP--INGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSCCSPDEVI 194
P GK L F++ + +++ FK + SP+E I
Sbjct: 142 LYVPGLDKGKGLYFLFVKSESKTSGGLPARPVLTSYYKSDHFKRRPYDPYNVYTSPNEAI 201
Query: 195 FGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREGVLNRS 254
D QS+Y +LCGL+ R EV + + FA ++ A + W+EL DI G L+
Sbjct: 202 LCSDSSQSMYAQMLCGLLMRHEVLRLGAVFASGLLRAISFLQNNWKELARDISTGTLSSR 261
Query: 255 IVVPSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPY 313
I P+I+ MSK+L KPD ELA + C NW G+I +++PN KY+ I+TG+M Y
Sbjct: 262 IFDPAIKNRMSKILTKPDQELAEFLVGVC-SQENWEGIITKIWPNTKYLDVIVTGAMAQY 320
Query: 314 LKKLRHYAGVLPLVTSDYGSSEGWIA 339
+ L +Y+G LP+ + Y SSE +
Sbjct: 321 IPTLEYYSGGLPMACTMYASSESYFG 346
>AT5G51470.1 | Symbols: | Auxin-responsive GH3 family protein |
chr5:20907287-20909340 FORWARD LENGTH=581
Length = 581
Score = 197 bits (501), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 175/309 (56%), Gaps = 5/309 (1%)
Query: 20 EEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKELEPF 79
E E LT + + +Q L+ IL NA+ EYL+ L+G + E FK +P+VT+++++PF
Sbjct: 14 EILEDLTSNVKQIQDNVLEEILTLNANTEYLRRF-LHGSSSKELFKKNVPVVTYEDVKPF 72
Query: 80 INRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQI--YHTAFAHRNR 137
I+R+ +G+ S I++G PIT LSSGT+ GKQK P N++ E I Y + ++
Sbjct: 73 IDRVTNGEPSDIISGNPITGFLLSSGTSGGKQKMFPRNNKYLENIKFIFYYRSLVISKHI 132
Query: 138 EFPINGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSCCSPDEVIFGP 197
+ +GK + F + + + F++ FK S SPDEVI
Sbjct: 133 DGLEHGKGMVFNFCTSENTTPSGLPSSAASTSFFKSDYFKNRPSYWHWSYTSPDEVILCS 192
Query: 198 DFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREGVLNRSIVV 257
D Q+LYCHLLCGL+ R++V V + F ++ A E W+E+C +IR G L+ I
Sbjct: 193 DTKQTLYCHLLCGLVQRDDVVKVGAAFVTILVRAINLLENSWKEICTNIRFGHLSEWITD 252
Query: 258 PSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKK 316
S R ++SK+L +P+PELA+LI+ +C S W G++P L+P AK++ I TG M ++
Sbjct: 253 ISCRDSVSKILGEPNPELADLIENECNNKS-WEGIVPRLWPKAKFIECIATGQMAQHIPT 311
Query: 317 LRHYAGVLP 325
L Y+ LP
Sbjct: 312 LEFYSNKLP 320
>AT5G13350.1 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4279884-4282287 FORWARD LENGTH=587
Length = 587
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 184/337 (54%), Gaps = 6/337 (1%)
Query: 6 MLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFK 65
ML K + D + E +T + +Q L+ +L NA EYL+ LNG+ D ++FK
Sbjct: 1 MLPKFDLTDPKASLSLLEDVTTNVTQIQDSILEAVLSRNAHTEYLKGF-LNGQVDKQTFK 59
Query: 66 SCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTL 125
+P+VT+++++P+INR+ +G+AS ++ +PI+ + +SSGTT+G Q +P E E +
Sbjct: 60 KNVPIVTYEDIKPYINRIANGEASDLICDRPISLLVMSSGTTAGIQNLIPLTTEDGEQRI 119
Query: 126 QI--YHTAFAHRNREFPINGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKAL 183
+ + ++ E GK+L+F + + + ++ K +
Sbjct: 120 MFGSLYRSLLYKYVEGIREGKSLTFYFVNPERETASGILIRTMITCILKSVN-KTNSSLW 178
Query: 184 KSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELC 243
SP E+ D QS+YC LLCGL+ R+ V + + FA I + E W+ELC
Sbjct: 179 DRLQISPHEISTCEDTTQSMYCQLLCGLLQRDNVARLGAPFASVFIRVIKYLEGHWQELC 238
Query: 244 ADIREGVLNRSIVVPSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELFPNAKYV 302
++IR G L+ I P + +SK L P+P+LA+LI+++C ++W ++ L+P AK V
Sbjct: 239 SNIRTGRLSDWITDPQCVSGISKFLTAPNPDLASLIEQEC-SKTSWEAIVKRLWPKAKCV 297
Query: 303 YGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSEGWIA 339
++TGSM Y+ L Y G LPL++S YGSSE ++
Sbjct: 298 EAVVTGSMAQYIPLLEFYGGGLPLISSWYGSSECFMG 334
>AT1G28130.1 | Symbols: GH3.17 | Auxin-responsive GH3 family protein
| chr1:9825431-9827883 FORWARD LENGTH=609
Length = 609
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 183/339 (53%), Gaps = 7/339 (2%)
Query: 6 MLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDP--ES 63
M+ + D + ++ E LT +AE +Q++ L +IL +N+ +YL++ L+G D +S
Sbjct: 1 MIPSYDPNDTEAGLKLLEDLTTNAEAIQQQVLHQILSQNSGTQYLRAF-LDGEADKNQQS 59
Query: 64 FKSCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFET 123
FK+ +P+V + +++PFI R+ DG++S I++ +PIT + SSGT++GK K +P E E
Sbjct: 60 FKNKVPVVNYDDVKPFIQRIADGESSDIVSAQPITELLTSSGTSAGKPKLMPSTAEELER 119
Query: 124 TLQIYHTAFAHRNREFP--INGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMK 181
Y N+ GK + ++ + +++ F+
Sbjct: 120 KTFFYSMLVPIMNKYVDGLDEGKGMYLLFIKPEIKTPSGLMARPVLTSYYKSQHFRNRPF 179
Query: 182 ALKSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEE 241
+ SPD+ I D QS+YC LLCGL+ R V V + FA + + A + E ++E
Sbjct: 180 NKYNVYTSPDQTILCQDSKQSMYCQLLCGLVQRSHVLRVGAVFASAFLRAVKFLEDHYKE 239
Query: 242 LCADIREGVLNRSIVVPSIRTAMSKLLK-PDPELANLIKRKCLGLSNWYGLIPELFPNAK 300
LCADIR G + I S R ++ +L P+ ELA+ I+ +C S W G++ ++P AK
Sbjct: 240 LCADIRTGTVTSWITDSSCRDSVLSILNGPNQELADEIESECAEKS-WEGILRRIWPKAK 298
Query: 301 YVYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSEGWIA 339
YV I+TGSM Y+ L Y+G LPLV++ Y SSE +
Sbjct: 299 YVEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFG 337
>AT2G47750.1 | Symbols: GH3.9 | putative indole-3-acetic acid-amido
synthetase GH3.9 | chr2:19560307-19562974 REVERSE
LENGTH=585
Length = 585
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 176/334 (52%), Gaps = 6/334 (1%)
Query: 10 VEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIP 69
V + D D V++E ER+T A VQ L+ ILE N EYL +NG D FK +P
Sbjct: 3 VMKLDHDSVLKELERITSKAAEVQDNILRGILERNKDTEYLSKY-MNGSKDVLEFKRAVP 61
Query: 70 LVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYH 129
++ +K++ P+I R+ +G+ S ++TG IT + SSGT++G+ K +P E + +Y+
Sbjct: 62 IIIYKDIYPYIQRIANGEDSSLITGHSITEILCSSGTSAGEPKLMPTIPEDLDRRTFLYN 121
Query: 130 TAFAHRNREFP--INGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSC 187
N+ GKA+ + + +++ F+ +
Sbjct: 122 LIIPIVNKYITGLDKGKAMYLNFVKAETSTPCGLPIRAVLTSYYKSKHFQCRPYDPFNDL 181
Query: 188 CSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIR 247
SP + I D +QS+YC LL GLI R +V + + FA + + A E+ W +LC DIR
Sbjct: 182 TSPIQTILCEDSNQSMYCQLLAGLIHRHKVMRLGAVFASAFLRAISYLEKKWSQLCEDIR 241
Query: 248 EGVLNRSIVVPSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIM 306
G LN I P + AMS LL P+PELA+ I+ C G S+W G++ +L+P AK++ ++
Sbjct: 242 TGSLNPMITDPGCQMAMSCLLMSPNPELASEIEEIC-GRSSWKGILCQLWPKAKFIEAVV 300
Query: 307 TGSMEPYLKKLRHYA-GVLPLVTSDYGSSEGWIA 339
TGSM Y+ L ++ G +PLV Y SSE +
Sbjct: 301 TGSMAQYIPALEFFSQGKIPLVCPMYASSETYFG 334
>AT1G59500.1 | Symbols: GH3.4 | Auxin-responsive GH3 family protein
| chr1:21854493-21856614 REVERSE LENGTH=597
Length = 597
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 172/326 (52%), Gaps = 6/326 (1%)
Query: 17 KVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKEL 76
K ++ E +T++ + VQ + L IL N++ EYL+ LNG D +SFKS +P+V +++L
Sbjct: 22 KALKFIEEITRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKSFKSKVPVVIYEDL 81
Query: 77 EPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRN 136
+ I R+ +GD SPIL+ PIT SSGT++G++K +P +E + + N
Sbjct: 82 KTDIQRISNGDRSPILSSHPITEFLTSSGTSAGERKLMPTIEEDINRRQLLGNLLMPVMN 141
Query: 137 REFP--INGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSCCSPDEVI 194
P GK L F++ + +++ F+ S S SP E I
Sbjct: 142 LYVPGLDKGKGLYFLFVKSESTTSGGLPARPALTSYYKSDYFRTSDS--DSVYTSPKEAI 199
Query: 195 FGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREGVLNRS 254
D QS+Y +LCGL+ R EV + + F ++ A + W+EL DI G L+
Sbjct: 200 LCCDSSQSMYTQMLCGLLMRHEVNRLGAVFPSGLLRAISFLQNNWKELSQDISTGTLSSK 259
Query: 255 IVVPSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPY 313
I +I+T MS +L KPD ELA + C NW G+I +++PN KY+ I+TG+M Y
Sbjct: 260 IFDHAIKTRMSNILNKPDQELAEFLIGVC-SQENWEGIITKIWPNTKYLDVIVTGAMAEY 318
Query: 314 LKKLRHYAGVLPLVTSDYGSSEGWIA 339
+ L +Y+G LP+ + Y SSE +
Sbjct: 319 IPMLEYYSGGLPMASMIYASSESYFG 344
>AT5G13360.2 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4283805-4286120 FORWARD LENGTH=594
Length = 594
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 175/339 (51%), Gaps = 18/339 (5%)
Query: 6 MLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFK 65
ML K + D + E +T + + +Q L+ IL NA EYL LNG+ D +SFK
Sbjct: 1 MLPKFDPTDQKACLSLLEDVTTNVKQIQDSVLEAILSRNAHTEYLSGF-LNGQADKKSFK 59
Query: 66 SCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTL 125
+P+VT+++++P+I+R+ +G+ S ++ +PI+ + SSGT+ G K +P E E +
Sbjct: 60 KNVPVVTYEDIKPYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTEELEQRI 119
Query: 126 QIYHTAFAHRNREFPINGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKAL-- 183
+FA R P+ K + I K F + +K++
Sbjct: 120 -----SFASLYR--PLLYKYIEGIRERKSFMLYFVTRESETASGILVRTMITCVLKSVTP 172
Query: 184 ------KSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQ 237
S SP + D QS+YC LLCGL+ R+ V + + FA S + + E
Sbjct: 173 ANSFIWDQSQISPHAITTCSDTTQSMYCQLLCGLLQRDNVGRLGAPFASSFLKIIKFLED 232
Query: 238 VWEELCADIREGVLNRSIVVPSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELF 296
W E C++IR G L+ I P + + K L P+PELA+LI+++C ++W ++ L+
Sbjct: 233 HWPEFCSNIRTGCLSDWITDPQCVSGIGKFLTAPNPELASLIEQEC-SQTSWEAIVKRLW 291
Query: 297 PNAKYVYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSE 335
P AK + I+TG+M Y L Y+G LP++++ YGSSE
Sbjct: 292 PKAKCIEAIVTGTMAQYNPLLEFYSGGLPVISTFYGSSE 330
>AT5G13360.1 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4283805-4286120 FORWARD LENGTH=594
Length = 594
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 175/339 (51%), Gaps = 18/339 (5%)
Query: 6 MLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFK 65
ML K + D + E +T + + +Q L+ IL NA EYL LNG+ D +SFK
Sbjct: 1 MLPKFDPTDQKACLSLLEDVTTNVKQIQDSVLEAILSRNAHTEYLSGF-LNGQADKKSFK 59
Query: 66 SCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTL 125
+P+VT+++++P+I+R+ +G+ S ++ +PI+ + SSGT+ G K +P E E +
Sbjct: 60 KNVPVVTYEDIKPYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTEELEQRI 119
Query: 126 QIYHTAFAHRNREFPINGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKAL-- 183
+FA R P+ K + I K F + +K++
Sbjct: 120 -----SFASLYR--PLLYKYIEGIRERKSFMLYFVTRESETASGILVRTMITCVLKSVTP 172
Query: 184 ------KSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQ 237
S SP + D QS+YC LLCGL+ R+ V + + FA S + + E
Sbjct: 173 ANSFIWDQSQISPHAITTCSDTTQSMYCQLLCGLLQRDNVGRLGAPFASSFLKIIKFLED 232
Query: 238 VWEELCADIREGVLNRSIVVPSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELF 296
W E C++IR G L+ I P + + K L P+PELA+LI+++C ++W ++ L+
Sbjct: 233 HWPEFCSNIRTGCLSDWITDPQCVSGIGKFLTAPNPELASLIEQEC-SQTSWEAIVKRLW 291
Query: 297 PNAKYVYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSE 335
P AK + I+TG+M Y L Y+G LP++++ YGSSE
Sbjct: 292 PKAKCIEAIVTGTMAQYNPLLEFYSGGLPVISTFYGSSE 330
>AT5G13360.3 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4283488-4286120 FORWARD LENGTH=672
Length = 672
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 175/339 (51%), Gaps = 18/339 (5%)
Query: 6 MLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFK 65
ML K + D + E +T + + +Q L+ IL NA EYL LNG+ D +SFK
Sbjct: 79 MLPKFDPTDQKACLSLLEDVTTNVKQIQDSVLEAILSRNAHTEYLSGF-LNGQADKKSFK 137
Query: 66 SCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTL 125
+P+VT+++++P+I+R+ +G+ S ++ +PI+ + SSGT+ G K +P E E +
Sbjct: 138 KNVPVVTYEDIKPYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTEELEQRI 197
Query: 126 QIYHTAFAHRNREFPINGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKAL-- 183
+FA R P+ K + I K F + +K++
Sbjct: 198 -----SFASLYR--PLLYKYIEGIRERKSFMLYFVTRESETASGILVRTMITCVLKSVTP 250
Query: 184 ------KSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQ 237
S SP + D QS+YC LLCGL+ R+ V + + FA S + + E
Sbjct: 251 ANSFIWDQSQISPHAITTCSDTTQSMYCQLLCGLLQRDNVGRLGAPFASSFLKIIKFLED 310
Query: 238 VWEELCADIREGVLNRSIVVPSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELF 296
W E C++IR G L+ I P + + K L P+PELA+LI+++C ++W ++ L+
Sbjct: 311 HWPEFCSNIRTGCLSDWITDPQCVSGIGKFLTAPNPELASLIEQEC-SQTSWEAIVKRLW 369
Query: 297 PNAKYVYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSE 335
P AK + I+TG+M Y L Y+G LP++++ YGSSE
Sbjct: 370 PKAKCIEAIVTGTMAQYNPLLEFYSGGLPVISTFYGSSE 408
>AT5G13370.1 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4286996-4289424 FORWARD LENGTH=595
Length = 595
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 180/338 (53%), Gaps = 8/338 (2%)
Query: 6 MLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFK 65
ML K + + + E LT + + +Q L+ IL NA EYL+ LNG+ D ++FK
Sbjct: 1 MLPKFDPTNQKACLSLLEDLTTNVKQIQDSVLEAILSRNAQTEYLRGF-LNGQVDKQNFK 59
Query: 66 SCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTL 125
+P+VT++++ +I+R+ +G+ S ++ +PI+ + SSGT+ G K +P E E +
Sbjct: 60 KNVPVVTYEDIRSYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTEDLEQRI 119
Query: 126 QI--YHTAFAHRNREFPINGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKAL 183
+ +++ + GK+L F + ++ + ++ K + L
Sbjct: 120 SFSSLYAPLLYKHIDGLSEGKSLIFYFVTRESKTANGLMVRTMVTSFLKS--IKQTNSFL 177
Query: 184 KSSC-CSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEEL 242
S SP + D QS+YC LLCGL+ R+ V + + FA S + + E W EL
Sbjct: 178 WDSLQVSPHAITTCADTTQSMYCQLLCGLLERDNVARLGAPFASSFLKVIKFLEDHWPEL 237
Query: 243 CADIREGVLNRSIVVPSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELFPNAKY 301
C++IR G L+ I + + + K L P+PELA+LI+++C ++W ++ L+P AK
Sbjct: 238 CSNIRTGRLSDWITDATCTSGIGKFLTAPNPELASLIEQEC-SKTSWEAILKRLWPKAKC 296
Query: 302 VYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSEGWIA 339
+ I+TG+M Y+ L Y+G LPL +S YGSSE ++
Sbjct: 297 IESIITGTMAQYIPLLEFYSGGLPLTSSFYGSSECFMG 334
>AT5G13380.1 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4289912-4292355 FORWARD LENGTH=624
Length = 624
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 176/338 (52%), Gaps = 8/338 (2%)
Query: 6 MLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFK 65
ML K + + + E +T + + +Q L+ IL N+ EYL+ L G+ D +SFK
Sbjct: 31 MLPKFDPTNPLATMSVLEDVTTNVKKIQDSLLEAILSRNSQTEYLRGF-LTGQLDKQSFK 89
Query: 66 SCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTL 125
+P+VT+++++P I+R+ +G+ S ++ +PI+ + ++GT+ G K +P E E +
Sbjct: 90 KNVPIVTYEDIKPHIDRIANGEPSDLICDRPISLLLATTGTSGGIPKLIPLTAEELEQRI 149
Query: 126 --QIYHTAFAHRNREFPINGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKAL 183
+ ++ E GK+L F + ++ V ++ P+ L
Sbjct: 150 LFGFLYVPLVFKHIEGLTQGKSLMFYFVTRESETVSGLMVRFMITCVLKS--VNPTNSFL 207
Query: 184 KSSC-CSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEEL 242
SP + D +Q +YC LLCGL+ RE V + + +A S + + E W EL
Sbjct: 208 WDRVQISPHAIAICEDTNQGMYCQLLCGLLQREHVARLGAPYASSFLKVIKFLEDHWPEL 267
Query: 243 CADIREGVLNRSIVVPSIRTAMSKLL-KPDPELANLIKRKCLGLSNWYGLIPELFPNAKY 301
C++IR G L+ I + + L PDP+LANLI+++C ++W ++ ++P AK
Sbjct: 268 CSNIRTGRLSDWITDAQCVSGIGNFLTAPDPDLANLIEQEC-SKTSWEAILSRIWPKAKC 326
Query: 302 VYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSEGWIA 339
+ ++TG+M Y+ L Y G LPLV+S YGSSE +I
Sbjct: 327 IEAVITGTMAQYIPLLEFYGGGLPLVSSWYGSSECFIG 364
>AT1G48670.1 | Symbols: | auxin-responsive GH3 family protein |
chr1:17998946-18001200 REVERSE LENGTH=525
Length = 525
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 161/316 (50%), Gaps = 51/316 (16%)
Query: 21 EFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKELEPFI 80
+ E LT +A+ +Q + L+ IL NA+ EYL L+G +D FK +P+VT+ +++P+I
Sbjct: 10 DLEELTSNAKQIQEDVLEEILTLNANTEYLHRF-LHGSSDKVLFKKNVPVVTYDDVKPYI 68
Query: 81 NRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRNREFP 140
R+ +G+ S +++G PIT S+GT+ GKQK P ND+ E +
Sbjct: 69 ERVANGEPSDVISGGPITMFLRSTGTSGGKQKVFPVNDKYIEKLGYVI------------ 116
Query: 141 INGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSCCSPDEVIFGPDFH 200
AL + SKHF KA++ C P P
Sbjct: 117 ----ALRSLAMSKHFDSGGEQG------------------KAMEFHCTKP------PSAT 148
Query: 201 QSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREGVLNRSIVVPSI 260
S GL R+EV V + FA ++ A E+ W+ELC++IR G ++ I
Sbjct: 149 PS-------GLP-RDEVVRVGAAFAFVLVRAIDFLEKHWKELCSNIRSGHVSEWITDLEG 200
Query: 261 RTAMSKLLK-PDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKKLRH 319
R A+S +L+ PD LA++I+++C +W G+I L+P AKY+ I+TG M Y+ L
Sbjct: 201 RNAVSTILRGPDSILADVIEQEC-SHKSWEGIITRLWPKAKYIDCIITGQMSQYIPMLEF 259
Query: 320 YAGVLPLVTSDYGSSE 335
Y+ LP+V++ YGSSE
Sbjct: 260 YSNKLPIVSTTYGSSE 275
>AT1G28130.2 | Symbols: GH3.17 | Auxin-responsive GH3 family protein
| chr1:9826379-9827883 FORWARD LENGTH=466
Length = 466
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 189 SPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIRE 248
SPD+ I D QS+YC LLCGL+ R V V + FA + + A + E ++ELCADIR
Sbjct: 44 SPDQTILCQDSKQSMYCQLLCGLVQRSHVLRVGAVFASAFLRAVKFLEDHYKELCADIRT 103
Query: 249 GVLNRSIVVPSIRTAMSKLLK-PDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMT 307
G + I S R ++ +L P+ ELA+ I+ +C S W G++ ++P AKYV I+T
Sbjct: 104 GTVTSWITDSSCRDSVLSILNGPNQELADEIESECAEKS-WEGILRRIWPKAKYVEVIVT 162
Query: 308 GSMEPYLKKLRHYAGVLPLVTSDYGSSEGWIA 339
GSM Y+ L Y+G LPLV++ Y SSE +
Sbjct: 163 GSMAQYIPTLEFYSGGLPLVSTMYASSECYFG 194
>AT1G48690.1 | Symbols: | Auxin-responsive GH3 family protein |
chr1:18009105-18009878 REVERSE LENGTH=190
Length = 190
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 8/189 (4%)
Query: 19 IEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKELEP 78
+++ E LT + + VQ + L+ IL+ NA+ EYL L+ + E FK +P+V++ ++ P
Sbjct: 7 LKDLEELTSNVKQVQDDLLEEILQINANTEYLCQF-LHRSSSKELFKKNVPVVSYDDVRP 65
Query: 79 FINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRNRE 138
+I R+ +G+ S I TG+ IT LSSGT+ GKQK P N++ FE + I+ + ++
Sbjct: 66 YIERVANGEPSNIFTGETITNFFLSSGTSGGKQKIFPVNNKYFENMIFIHALCSSTISKY 125
Query: 139 FP--INGKALSFIYSSKHFXXXXXXXXXXXXXNVFRNPGFKPSMKALKSSC-CSPDEVIF 195
GK ++F+ +++ F F + K S C SPDEVI
Sbjct: 126 IDGIGEGKVMAFL-NTRPFSKTPSGLPVAPLSTSFAMSDY---FKNRPSKCYISPDEVIL 181
Query: 196 GPDFHQSLY 204
D Q++Y
Sbjct: 182 CVDNRQNMY 190