Miyakogusa Predicted Gene

Lj3g3v2387600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2387600.1 Non Chatacterized Hit- tr|I3SHU4|I3SHU4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,91.52,0,no
description,NAD(P)-binding domain; no description,Dehydrogenase,
multihelical; NAD(P)-binding Ros,CUFF.43954.1
         (176 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G25530.1 | Symbols: GHBDH, ATGHBDH, GLYR1, GR1 | glyoxylate r...   259   6e-70
AT3G25530.2 | Symbols: GHBDH, ATGHBDH, GLYR1, GR1 | glyoxylate r...   238   1e-63
AT1G17650.1 | Symbols: GLYR2, GR2 | glyoxylate reductase 2 | chr...   189   7e-49
AT4G20930.1 | Symbols:  | 6-phosphogluconate dehydrogenase famil...    67   5e-12
AT4G29120.1 | Symbols:  | 6-phosphogluconate dehydrogenase famil...    66   9e-12
AT1G71170.1 | Symbols:  | 6-phosphogluconate dehydrogenase famil...    65   2e-11
AT1G71180.1 | Symbols:  | 6-phosphogluconate dehydrogenase famil...    56   1e-08
AT1G18270.2 | Symbols:  | ketose-bisphosphate aldolase class-II ...    54   4e-08
AT1G18270.1 | Symbols:  | ketose-bisphosphate aldolase class-II ...    54   4e-08
AT1G18270.3 | Symbols:  | ketose-bisphosphate aldolase class-II ...    54   4e-08

>AT3G25530.1 | Symbols: GHBDH, ATGHBDH, GLYR1, GR1 | glyoxylate
           reductase 1 | chr3:9271949-9273514 REVERSE LENGTH=289
          Length = 289

 Score =  259 bits (662), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 131/164 (79%), Positives = 152/164 (92%), Gaps = 1/164 (0%)

Query: 1   MLSDPAAALAVVFDKDGVLDQI-KGKGYIDMSTVDAETSLKISEAIKAKGGSFVEGPVSG 59
           MLSDP AAL+VVFDK GVL+QI +GKGYIDMSTVDAETSLKI+EAI  KGG FVEGPVSG
Sbjct: 63  MLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSG 122

Query: 60  SKKPAEDGQLVILAAGDKALYEEALPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSMMN 119
           SKKPAEDGQL+ILAAGDKAL+EE++PAFDVLGK+SF+LG+VGNGAKMKL+VNMIMGSMMN
Sbjct: 123 SKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMN 182

Query: 120 AFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPAMLKNN 163
           AFSEGL LA++SGL+  TLLD+LDLGA++N MFK KGP+M K++
Sbjct: 183 AFSEGLVLADKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSS 226


>AT3G25530.2 | Symbols: GHBDH, ATGHBDH, GLYR1, GR1 | glyoxylate
           reductase 1 | chr3:9271949-9273514 REVERSE LENGTH=278
          Length = 278

 Score =  238 bits (608), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 121/163 (74%), Positives = 142/163 (87%), Gaps = 10/163 (6%)

Query: 1   MLSDPAAALAVVFDKDGVLDQIKGKGYIDMSTVDAETSLKISEAIKAKGGSFVEGPVSGS 60
           MLSDP AAL++           +GKGYIDMSTVDAETSLKI+EAI  KGG FVEGPVSGS
Sbjct: 63  MLSDPCAALSIC----------EGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGS 112

Query: 61  KKPAEDGQLVILAAGDKALYEEALPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSMMNA 120
           KKPAEDGQL+ILAAGDKAL+EE++PAFDVLGK+SF+LG+VGNGAKMKL+VNMIMGSMMNA
Sbjct: 113 KKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNA 172

Query: 121 FSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPAMLKNN 163
           FSEGL LA++SGL+  TLLD+LDLGA++N MFK KGP+M K++
Sbjct: 173 FSEGLVLADKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSS 215


>AT1G17650.1 | Symbols: GLYR2, GR2 | glyoxylate reductase 2 |
           chr1:6069594-6071964 REVERSE LENGTH=358
          Length = 358

 Score =  189 bits (481), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 94/163 (57%), Positives = 125/163 (76%), Gaps = 1/163 (0%)

Query: 1   MLSDPAAALAVVFDKDGVLDQIK-GKGYIDMSTVDAETSLKISEAIKAKGGSFVEGPVSG 59
           ML+DP +A+ V   K+G +  I  GKGY+D+STVD  +S+ IS+ IK  G  F+E PVSG
Sbjct: 129 MLADPESAIDVACGKNGAIFGISSGKGYVDVSTVDVASSILISKQIKDTGALFLEAPVSG 188

Query: 60  SKKPAEDGQLVILAAGDKALYEEALPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSMMN 119
           SKKPAEDGQL+ L AGDK LYE+A P  D++GK  F+LGEVGNGA MKLVVNMIMGSMM 
Sbjct: 189 SKKPAEDGQLIFLTAGDKPLYEKAAPFLDIMGKSKFYLGEVGNGAAMKLVVNMIMGSMMA 248

Query: 120 AFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPAMLKN 162
           +F+EG+ L+++ GL+P  L++V+  GAI+  M+ LKGP+M+K+
Sbjct: 249 SFAEGILLSQKVGLDPNVLVEVVSQGAINAPMYSLKGPSMIKS 291


>AT4G20930.1 | Symbols:  | 6-phosphogluconate dehydrogenase family
           protein | chr4:11198627-11201036 REVERSE LENGTH=347
          Length = 347

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 13/156 (8%)

Query: 1   MLSDPAAALAVVFDKDGVL---DQIKGKGYIDMSTVDAETSLKISEAI-----KAKGGSF 52
           ML   +  + V    +G+L   + I+   +ID ST+D +T+ KIS A+     K K  ++
Sbjct: 100 MLPSSSHVMDVYTGTNGLLLGENDIRPALFIDSSTIDPQTTRKISLAVSNCNLKEKRDNW 159

Query: 53  -----VEGPVSGSKKPAEDGQLVILAAGDKALYEEALPAFDVLGKKSFFLGEVGNGAKMK 107
                ++ PVSG    AE G L  +  G +  Y  A P    +G+ S + G  GNG+  K
Sbjct: 160 EKPVMLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAK 219

Query: 108 LVVNMIMGSMMNAFSEGLTLAERSGLNPGTLLDVLD 143
           +  N+ M   M   SE L L +  G++  TL +VL+
Sbjct: 220 ICNNLAMAVSMLGTSEALALGQSLGISASTLTEVLN 255


>AT4G29120.1 | Symbols:  | 6-phosphogluconate dehydrogenase family
           protein | chr4:14350861-14351865 FORWARD LENGTH=334
          Length = 334

 Score = 66.2 bits (160), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 3/168 (1%)

Query: 5   PAAALAVVFD-KDGVLDQIKGKGY-IDMSTVDAETSLKISEAIKAKGGSFVEGPVSGSKK 62
           P+    V+ D K G L  ++  G  +DM+T +   + +I++A   K    ++ PVSG   
Sbjct: 104 PSDVRHVLLDPKSGALSGLRQGGVLVDMTTSEPSLAEEIAKAASFKNCFSIDAPVSGGDL 163

Query: 63  PAEDGQLVILAAGDKALYEEALPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSMMNAFS 122
            A++G+L I A GD+   +   P F ++GK + F+G  G G   KL   + + S M    
Sbjct: 164 GAKNGKLSIFAGGDETTVKRLDPLFSLMGKVN-FMGTSGKGQFAKLANQITIASTMLGLV 222

Query: 123 EGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPAMLKNNSAEGHEI 170
           EGL  A ++GL+    L+ +  GA  +    L G  +LK +   G  +
Sbjct: 223 EGLIYAHKAGLDVKKFLEAISTGAAGSKSIDLYGDRILKRDFDPGFYV 270


>AT1G71170.1 | Symbols:  | 6-phosphogluconate dehydrogenase family
           protein | chr1:26830673-26831572 FORWARD LENGTH=299
          Length = 299

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 2/145 (1%)

Query: 16  DGVLDQIKGKGY-IDMSTVDAETSLKISEAIKAKGGSFVEGPVSGSKKPAEDGQLVILAA 74
           DGVL  +K  G  +DM++     + +I    + +    V+ PVSG    A +G+L I A 
Sbjct: 91  DGVLSGLKPGGVTVDMTSSKPGLAREIYAEARRRDCWAVDAPVSGGDAGAREGKLTIFAG 150

Query: 75  GDKALYEEALPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSMMNAFSEGLTLAERSGLN 134
           GD  + E   P    +G   F +G  G+G   K+   + +GS M   +EG+  AE++GL+
Sbjct: 151 GDSEIVEWLAPVMKTMGIVRF-MGGAGSGQSCKIGNQICVGSNMIGLAEGIVFAEKAGLD 209

Query: 135 PGTLLDVLDLGAISNGMFKLKGPAM 159
           P   L+ +  GA  + + +L G  M
Sbjct: 210 PVKWLEAVKDGAAGSAVMRLFGEMM 234


>AT1G71180.1 | Symbols:  | 6-phosphogluconate dehydrogenase family
           protein | chr1:26832335-26833291 FORWARD LENGTH=318
          Length = 318

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 2/149 (1%)

Query: 16  DGVLDQIKGKGY-IDMSTVDAETSLKISEAIKAKGGSFVEGPVSGSKKPAEDGQLVILAA 74
           DGVL  +   G  +DM++     + +I    + +    V+ PVSG    A +G L I A 
Sbjct: 112 DGVLSGLTPGGVTVDMTSSKPGLAREIHAEARRRNCWAVDAPVSGGDAGAREGTLGIFAG 171

Query: 75  GDKALYEEALPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSMMNAFSEGLTLAERSGLN 134
           GD  + E   P    +G  ++ +GE G+G   K+   +   S +   +EG+  AE++GL+
Sbjct: 172 GDSEIVEWLSPVMKNIGTVTY-MGEAGSGQSCKIGNQIAGASNLVGLAEGIVFAEKAGLD 230

Query: 135 PGTLLDVLDLGAISNGMFKLKGPAMLKNN 163
               L+ +  GA  + + +L G  ++K +
Sbjct: 231 TVKWLEAVKDGAAGSAVMRLFGEMIVKRD 259


>AT1G18270.2 | Symbols:  | ketose-bisphosphate aldolase class-II
           family protein | chr1:6283634-6293772 REVERSE
           LENGTH=1374
          Length = 1374

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 4/166 (2%)

Query: 2   LSDPAAALAVVFDKDGVLDQIKGKGYIDMSTVDAETSL-KISEAIKAKGGSF--VEGPVS 58
           LS P     V+F  +GV+  ++    + +S+  +   L K+ + +  K      V+  V 
Sbjct: 67  LSHPDQIQDVIFGDEGVMKGLQKDAVLLLSSTISTLQLQKLEKQLTEKREQIFVVDAYVL 126

Query: 59  GSKKPAEDGQLVILAAGDKALYEEALPAFDVLGKKSF-FLGEVGNGAKMKLVVNMIMGSM 117
                  DG+L+I+A+G       A P    + +  + F GE+G G+K+K+V  ++ G  
Sbjct: 127 KGMSELLDGKLMIIASGRSDSITRAQPYLTAMCQNLYTFEGEIGAGSKVKMVNELLEGIH 186

Query: 118 MNAFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPAMLKNN 163
           + A  E ++L  ++G++P  L D++   A ++ ++K   P +LK++
Sbjct: 187 LVAAVEAISLGSQAGVHPWILYDIISNAAGNSWIYKNHIPLLLKDD 232



 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 6/168 (3%)

Query: 1   MLSDPAAALAVVFDKDGVLDQI-KGKGYIDMSTVDAETSLKISEAIKAKGG--SFVEGPV 57
           M+++   A  V++   G ++ I  G   +  STV      ++   ++ +G     V+ PV
Sbjct: 385 MVTNEVQAEDVLYGHLGAVEAIPSGATVVLASTVSPAFVSQLERRLENEGKDLKLVDAPV 444

Query: 58  SGSKKPAEDGQLVILAAG-DKALYEEALPAFDVLGKKSFFL-GEVGNGAKMKLVVNMIMG 115
           SG  K A  G+L I+A+G D+AL    L     L +K + + G  G G+ +K+V  ++ G
Sbjct: 445 SGGVKRAAMGELTIMASGTDEALKSAGL-VLSALSEKLYVIKGGCGAGSGVKMVNQLLAG 503

Query: 116 SMMNAFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPAMLKNN 163
             + + +E +    R GLN   L +V+     ++ MF+ + P ML N+
Sbjct: 504 VHIASAAEAMAFGARLGLNTRKLFNVISNSGGTSWMFENRVPHMLDND 551


>AT1G18270.1 | Symbols:  | ketose-bisphosphate aldolase class-II
           family protein | chr1:6283634-6293772 REVERSE
           LENGTH=1373
          Length = 1373

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 4/166 (2%)

Query: 2   LSDPAAALAVVFDKDGVLDQIKGKGYIDMSTVDAETSL-KISEAIKAKGGSF--VEGPVS 58
           LS P     V+F  +GV+  ++    + +S+  +   L K+ + +  K      V+  V 
Sbjct: 66  LSHPDQIQDVIFGDEGVMKGLQKDAVLLLSSTISTLQLQKLEKQLTEKREQIFVVDAYVL 125

Query: 59  GSKKPAEDGQLVILAAGDKALYEEALPAFDVLGKKSF-FLGEVGNGAKMKLVVNMIMGSM 117
                  DG+L+I+A+G       A P    + +  + F GE+G G+K+K+V  ++ G  
Sbjct: 126 KGMSELLDGKLMIIASGRSDSITRAQPYLTAMCQNLYTFEGEIGAGSKVKMVNELLEGIH 185

Query: 118 MNAFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPAMLKNN 163
           + A  E ++L  ++G++P  L D++   A ++ ++K   P +LK++
Sbjct: 186 LVAAVEAISLGSQAGVHPWILYDIISNAAGNSWIYKNHIPLLLKDD 231



 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 6/168 (3%)

Query: 1   MLSDPAAALAVVFDKDGVLDQI-KGKGYIDMSTVDAETSLKISEAIKAKGG--SFVEGPV 57
           M+++   A  V++   G ++ I  G   +  STV      ++   ++ +G     V+ PV
Sbjct: 384 MVTNEVQAEDVLYGHLGAVEAIPSGATVVLASTVSPAFVSQLERRLENEGKDLKLVDAPV 443

Query: 58  SGSKKPAEDGQLVILAAG-DKALYEEALPAFDVLGKKSFFL-GEVGNGAKMKLVVNMIMG 115
           SG  K A  G+L I+A+G D+AL    L     L +K + + G  G G+ +K+V  ++ G
Sbjct: 444 SGGVKRAAMGELTIMASGTDEALKSAGL-VLSALSEKLYVIKGGCGAGSGVKMVNQLLAG 502

Query: 116 SMMNAFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPAMLKNN 163
             + + +E +    R GLN   L +V+     ++ MF+ + P ML N+
Sbjct: 503 VHIASAAEAMAFGARLGLNTRKLFNVISNSGGTSWMFENRVPHMLDND 550


>AT1G18270.3 | Symbols:  | ketose-bisphosphate aldolase class-II
           family protein | chr1:6283634-6293772 REVERSE
           LENGTH=1393
          Length = 1393

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 4/166 (2%)

Query: 2   LSDPAAALAVVFDKDGVLDQIKGKGYIDMSTVDAETSL-KISEAIKAKGGSF--VEGPVS 58
           LS P     V+F  +GV+  ++    + +S+  +   L K+ + +  K      V+  V 
Sbjct: 66  LSHPDQIQDVIFGDEGVMKGLQKDAVLLLSSTISTLQLQKLEKQLTEKREQIFVVDAYVL 125

Query: 59  GSKKPAEDGQLVILAAGDKALYEEALPAFDVLGKKSF-FLGEVGNGAKMKLVVNMIMGSM 117
                  DG+L+I+A+G       A P    + +  + F GE+G G+K+K+V  ++ G  
Sbjct: 126 KGMSELLDGKLMIIASGRSDSITRAQPYLTAMCQNLYTFEGEIGAGSKVKMVNELLEGIH 185

Query: 118 MNAFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPAMLKNN 163
           + A  E ++L  ++G++P  L D++   A ++ ++K   P +LK++
Sbjct: 186 LVAAVEAISLGSQAGVHPWILYDIISNAAGNSWIYKNHIPLLLKDD 231



 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 6/168 (3%)

Query: 1   MLSDPAAALAVVFDKDGVLDQI-KGKGYIDMSTVDAETSLKISEAIKAKGG--SFVEGPV 57
           M+++   A  V++   G ++ I  G   +  STV      ++   ++ +G     V+ PV
Sbjct: 384 MVTNEVQAEDVLYGHLGAVEAIPSGATVVLASTVSPAFVSQLERRLENEGKDLKLVDAPV 443

Query: 58  SGSKKPAEDGQLVILAAG-DKALYEEALPAFDVLGKKSFFL-GEVGNGAKMKLVVNMIMG 115
           SG  K A  G+L I+A+G D+AL    L     L +K + + G  G G+ +K+V  ++ G
Sbjct: 444 SGGVKRAAMGELTIMASGTDEALKSAGL-VLSALSEKLYVIKGGCGAGSGVKMVNQLLAG 502

Query: 116 SMMNAFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPAMLKNN 163
             + + +E +    R GLN   L +V+     ++ MF+ + P ML N+
Sbjct: 503 VHIASAAEAMAFGARLGLNTRKLFNVISNSGGTSWMFENRVPHMLDND 550