Miyakogusa Predicted Gene
- Lj3g3v2387590.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2387590.1 Non Chatacterized Hit- tr|D8SK90|D8SK90_SELML
Putative uncharacterized protein OS=Selaginella
moelle,27.8,2e-18,LRR_6,NULL; LRR_1,Leucine-rich repeat; GB DEF:
F21O3.26 PROTEIN (HYPOTHETICAL PROTEIN AT3G07550/F21O,gene.g48931.t1.1
(376 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07550.2 | Symbols: | RNI-like superfamily protein | chr3:24... 407 e-114
AT3G07550.1 | Symbols: | RNI-like superfamily protein | chr3:24... 407 e-114
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 121 8e-28
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 109 3e-24
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr... 107 2e-23
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1... 94 1e-19
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 81 1e-15
AT5G01720.1 | Symbols: | RNI-like superfamily protein | chr5:26... 81 1e-15
AT3G58530.1 | Symbols: | RNI-like superfamily protein | chr3:21... 77 1e-14
AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276... 73 4e-13
AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 | chr3:18572... 72 5e-13
AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting prote... 70 3e-12
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei... 68 1e-11
AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein | ch... 67 2e-11
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily pr... 67 2e-11
AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein | chr... 64 3e-10
AT1G80570.1 | Symbols: | RNI-like superfamily protein | chr1:30... 63 3e-10
AT1G80570.3 | Symbols: | RNI-like superfamily protein | chr1:30... 63 3e-10
AT1G80570.2 | Symbols: | RNI-like superfamily protein | chr1:30... 63 3e-10
AT4G33210.1 | Symbols: SLOMO | F-box family protein | chr4:16015... 58 1e-08
AT5G07670.1 | Symbols: | RNI-like superfamily protein | chr5:24... 54 2e-07
AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 | chr4:41978... 53 4e-07
AT5G51380.1 | Symbols: | RNI-like superfamily protein | chr5:20... 52 5e-07
AT5G21900.1 | Symbols: | RNI-like superfamily protein | chr5:72... 52 8e-07
AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 | chr5... 52 1e-06
AT5G51370.2 | Symbols: | RNI-like superfamily protein | chr5:20... 51 1e-06
AT1G55590.1 | Symbols: | RNI-like superfamily protein | chr1:20... 50 2e-06
AT2G17020.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 3e-06
AT5G67140.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 3e-06
>AT3G07550.2 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 407 bits (1046), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/377 (56%), Positives = 279/377 (74%), Gaps = 3/377 (0%)
Query: 1 MHLPDDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSLQFECSFTVLTRTSLSGKS 60
+HLPDDCL+ IF LDS D +SFGLTC RWL+IQ+ +RRSLQF+CSF+VL +SLS +
Sbjct: 16 IHLPDDCLSFIFQRLDSVADHDSFGLTCHRWLNIQNISRRSLQFQCSFSVLNPSSLSQTN 75
Query: 61 FDIXXXXXXXXXXXXXXXESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGL 120
D+ E LSL GC L+DS L L G+ L LYLDCCF ++D G+
Sbjct: 76 PDVSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGI 135
Query: 121 SLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCR 180
S +AS CP+L+ +SLYRC ++D GLETLA A LSLKCVN+SYC +SD G+K L++ C
Sbjct: 136 STIASFCPNLSVVSLYRC-NISDIGLETLARASLSLKCVNLSYCPLVSDFGIKALSQACL 194
Query: 181 QLQAVNISHCDSITGIGFGGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWS 240
QL++V IS+C SITG+GF GCS TL V+A+SC+L P+G+ GI+SGGG+E+L++S +S
Sbjct: 195 QLESVKISNCKSITGVGFSGCSPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCY 254
Query: 241 VLGDPLSGIG--FSSRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQ 298
+ D L IG +S+L+ILN R+CRTV D S+ AIAKGCPLL+EWNLALC+EV+ISGW+
Sbjct: 255 IRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWE 314
Query: 299 AVGLYCRNLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIALELFKSHRPD 358
AVG +CRNLK+LHVNRC NL D GLLAL+ GC +L ILY++G +RLT A+E+F+ HR D
Sbjct: 315 AVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNARLTPTAIEMFRLHRAD 374
Query: 359 VCIKEEEVMSIKPNWEF 375
+ ++ EE+M I P+W
Sbjct: 375 ITLRTEEMMVIGPDWRL 391
>AT3G07550.1 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 407 bits (1046), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/377 (56%), Positives = 279/377 (74%), Gaps = 3/377 (0%)
Query: 1 MHLPDDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSLQFECSFTVLTRTSLSGKS 60
+HLPDDCL+ IF LDS D +SFGLTC RWL+IQ+ +RRSLQF+CSF+VL +SLS +
Sbjct: 16 IHLPDDCLSFIFQRLDSVADHDSFGLTCHRWLNIQNISRRSLQFQCSFSVLNPSSLSQTN 75
Query: 61 FDIXXXXXXXXXXXXXXXESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGL 120
D+ E LSL GC L+DS L L G+ L LYLDCCF ++D G+
Sbjct: 76 PDVSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGI 135
Query: 121 SLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCR 180
S +AS CP+L+ +SLYRC ++D GLETLA A LSLKCVN+SYC +SD G+K L++ C
Sbjct: 136 STIASFCPNLSVVSLYRC-NISDIGLETLARASLSLKCVNLSYCPLVSDFGIKALSQACL 194
Query: 181 QLQAVNISHCDSITGIGFGGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWS 240
QL++V IS+C SITG+GF GCS TL V+A+SC+L P+G+ GI+SGGG+E+L++S +S
Sbjct: 195 QLESVKISNCKSITGVGFSGCSPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCY 254
Query: 241 VLGDPLSGIG--FSSRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQ 298
+ D L IG +S+L+ILN R+CRTV D S+ AIAKGCPLL+EWNLALC+EV+ISGW+
Sbjct: 255 IRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWE 314
Query: 299 AVGLYCRNLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIALELFKSHRPD 358
AVG +CRNLK+LHVNRC NL D GLLAL+ GC +L ILY++G +RLT A+E+F+ HR D
Sbjct: 315 AVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNARLTPTAIEMFRLHRAD 374
Query: 359 VCIKEEEVMSIKPNWEF 375
+ ++ EE+M I P+W
Sbjct: 375 ITLRTEEMMVIGPDWRL 391
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 173/373 (46%), Gaps = 33/373 (8%)
Query: 3 LPDDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSL----------QFECSFTVLT 52
L DD L + LDS D+E FGL C+RWL++Q +R+ L + FT +
Sbjct: 10 LTDDELRWVLSRLDSDKDKEVFGLVCKRWLNLQSTDRKKLAARAGPHMLRRLASRFTQIV 69
Query: 53 RTSLS---GKSF--DIXXXXXXXXXXXXXXXESLSLCGCRELSDSGLTRLLTYGSNLQKL 107
LS +SF + L+L C+ ++D+GL + S LQ L
Sbjct: 70 ELDLSQSISRSFYPGVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFL 129
Query: 108 YLDCCFKVTDYGLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQI 167
+ C K++D GLS VA GC L + L C +TD+ L++L+ C L+ + + CT I
Sbjct: 130 DVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNI 189
Query: 168 SDKGLKTLTEHCRQLQAVNISHCDSITGIGFG----GCSKTLACVEAESC-KLTPEGVMG 222
+D GL L + CR++++++I+ C ++ G C+ +L ++ C K+ E +
Sbjct: 190 TDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISS 249
Query: 223 IVSG-GGMEYL------DVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAIA 275
+ +E L D+S S +L D LK L C +SD+S+ I
Sbjct: 250 LAQFCKNLETLIIGGCRDISDESIMLLADSC-----KDSLKNLRMDWCLNISDSSLSCIL 304
Query: 276 KGCPLLEEWNLALCNEVRISGWQAVGL-YCRNLKRLHVNRCHNLSDGGLLALQDGCRSLT 334
K C LE ++ C EV + ++ +G LK L V+ C ++ G+ L D C SL
Sbjct: 305 KQCKNLEALDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIGKLLDKCSSLE 364
Query: 335 ILYLSGCSRLTSI 347
+ + +T +
Sbjct: 365 YIDVRSLPHVTEV 377
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%)
Query: 255 LKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHVNR 314
L++LN C+ ++DT + +I + LL+ +++ C ++ G AV C +L+ LH+
Sbjct: 100 LRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAG 159
Query: 315 CHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIAL 349
C ++D L +L + CR L L L GC+ +T L
Sbjct: 160 CRFITDESLKSLSERCRDLEALGLQGCTNITDSGL 194
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Query: 79 ESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCP-SLTTISLYR 137
++L L C ++ + ++ L + NL+ L + C ++D + L+A C SL + +
Sbjct: 232 KTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDW 291
Query: 138 CLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTL-TEHCRQLQAVNISHCDSITGI 196
CL ++D L + C +L+ ++I C +++D + L ++ L+ + +S+C IT
Sbjct: 292 CLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVT 351
Query: 197 GFGGCSKTLACVEAESCKLTPEGVMGIVSGGGMEY 231
G G + +E + P S G+E+
Sbjct: 352 GIGKLLDKCSSLEYIDVRSLPHVTEVRCSEAGLEF 386
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 266 VSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLA 325
V+D+ + I++G L NL C + +G ++G L+ L V+ C LSD GL A
Sbjct: 85 VTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSA 144
Query: 326 LQDGCRSLTILYLSGCSRLTSIALE 350
+ +GC L L+L+GC +T +L+
Sbjct: 145 VAEGCHDLRALHLAGCRFITDESLK 169
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 168/366 (45%), Gaps = 15/366 (4%)
Query: 3 LPDDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSLQFECSFTVLTRTSLSGKSFD 62
LP++ + IF L+S+ +R++ L C+RWL ++ F+R +L+ SF+ SL + F
Sbjct: 11 LPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASFSPDDFISLLSRRFL 70
Query: 63 IXXXXXXXXXXXXXXXESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDC----CFKVTDY 118
+ DS K + +TD
Sbjct: 71 YITSIHVDERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVESSSLTDT 130
Query: 119 GLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEH 178
GL+ +A+G P + +SL C V+ GL +LA C SLK +++ C + D+GL + +
Sbjct: 131 GLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGC-YVGDQGLAAVGKF 189
Query: 179 CRQLQAVNISHCDSITGIGF----GGCSKTLACVE-AESCKLTPEGVMGIVSGGGMEYLD 233
C+QL+ +N+ C+ +T +G GCSK+L + A S K+T + + G + L+
Sbjct: 190 CKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAV--GSHCKLLE 247
Query: 234 VSCLSWSVLGDP--LSGIGFSSRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNE 291
V L + D ++ RLK L + C +V+D + A+ + C LE L
Sbjct: 248 VLYLDSEYIHDKGLIAVAQGCHRLKNLKLQ-CVSVTDVAFAAVGELCTSLERLALYSFQH 306
Query: 292 VRISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIALEL 351
G +A+G + LK L ++ C+ +S GL A+ GC+ L + ++GC + + +E
Sbjct: 307 FTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEA 366
Query: 352 FKSHRP 357
P
Sbjct: 367 IGKSCP 372
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 8/287 (2%)
Query: 79 ESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRC 138
E L+L + +D G+ + L+ L L C+ V+ GL +A GC L + + C
Sbjct: 297 ERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGC 356
Query: 139 LGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGF 198
+ +G+E + +C LK + + YC +I + L+ + + C+ L+ +++ C I I
Sbjct: 357 HNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAM 416
Query: 199 GGCSKTLACVEAESCKLT---PEGVMGIVS-GGGMEYLDVSCLSW--SVLGDPLSGIGFS 252
CS C + + G GI+S G + L L + V L IG
Sbjct: 417 --CSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKG 474
Query: 253 SRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHV 312
L+ LN C +SD + AIA+GCP L ++++ + +G C LK L +
Sbjct: 475 CSLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVL 534
Query: 313 NRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIALELFKSHRPDV 359
+ CH+++D GL L C+ L ++ C +TS + S P +
Sbjct: 535 SHCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGVATVVSSCPHI 581
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 23/271 (8%)
Query: 79 ESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRC 138
+S+ + +++D L + ++ L+ LYLD + + D GL VA GC L + L +C
Sbjct: 221 KSIGVAASAKITDLSLEAVGSHCKLLEVLYLDSEY-IHDKGLIAVAQGCHRLKNLKL-QC 278
Query: 139 LGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGF 198
+ VTD + C SL+ + + +DKG++ + + ++L+ + +S C ++ G
Sbjct: 279 VSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGL 338
Query: 199 GGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFSSRLKIL 258
+ C E E ++ +G G+E + SC RLK L
Sbjct: 339 EAIAH--GCKELERVEINGCHNIGTR---GIEAIGKSC----------------PRLKEL 377
Query: 259 NFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHVNRCHNL 318
C+ + ++++ I KGC LE +L C+ + ++ CRNLK+LH+ RC+ +
Sbjct: 378 ALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEI 437
Query: 319 SDGGLLALQDGCRSLTILYLSGCSRLTSIAL 349
+ G++++ C+SLT L L C ++ + AL
Sbjct: 438 GNKGIISIGKHCKSLTELSLRFCDKVGNKAL 468
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 31/291 (10%)
Query: 89 LSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCLGVTDKGLET 148
L+D+GLT L ++ L L C V+ GL +A C SL ++ L C V D+GL
Sbjct: 127 LTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCY-VGDQGLAA 185
Query: 149 LASACLSLKCVNISYCTQISDKGLKTLTEHC-RQLQAVNISHCDSITGI---GFGGCSKT 204
+ C L+ +N+ +C ++D G+ L C + L+++ ++ IT + G K
Sbjct: 186 VGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKL 245
Query: 205 LACVEAESCKLTPEGVMGIVSG-GGMEYLDVSCLS-----WSVLGD-------------- 244
L + +S + +G++ + G ++ L + C+S ++ +G+
Sbjct: 246 LEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQ 305
Query: 245 -----PLSGIGF-SSRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQ 298
+ IG S +LK L C VS + AIA GC LE + C+ + G +
Sbjct: 306 HFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIE 365
Query: 299 AVGLYCRNLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIAL 349
A+G C LK L + C + + L + GC+SL IL+L CS + IA+
Sbjct: 366 AIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAM 416
>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
chr5:8794842-8796882 REVERSE LENGTH=623
Length = 623
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 49/370 (13%)
Query: 3 LPDDCLTIIFHALDSRTDRESFGLTCRRWLHI------QDFNRRSLQ-FECSFTVLTRTS 55
LP++CL I L S +R + + WL++ + N S+Q E L+R+
Sbjct: 58 LPEECLFEILRRLPSGQERSACACVSKHWLNLLSSISRSEVNESSVQDVEEGEGFLSRSL 117
Query: 56 LSGKSFDIXXXXXXXXXXXXXXXESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKV 115
K+ D+ L+ S GL +L GS + KV
Sbjct: 118 EGKKATDLR----------------LAAIAVGTSSRGGLGKLQIRGSGFES-------KV 154
Query: 116 TDYGLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTL 175
TD GL VA GCPSL +SL+ V+D GL +A +C ++ +++S C I+D GL +
Sbjct: 155 TDVGLGAVAHGCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAI 214
Query: 176 TEHCRQLQAVNISHCDSITGIGFGGCSK---TLACVEAESC-KLTPEGVMGIVSGGG--- 228
E+C L + I C + G ++ L + SC ++ +GV +++ G
Sbjct: 215 AENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYL 274
Query: 229 ----MEYLDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTS--VVAIAKGCPLLE 282
++ L+VS LS +V+G + + + L + V++ V+ AKG L+
Sbjct: 275 TKVKLQMLNVSGLSLAVIGH------YGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLK 328
Query: 283 EWNLALCNEVRISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLSGCS 342
++ C + G +AVG C +LK + +N+C +S GL+AL SL L L C
Sbjct: 329 SLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECH 388
Query: 343 RLTSIALELF 352
R+ L F
Sbjct: 389 RINQFGLMGF 398
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 130/308 (42%), Gaps = 69/308 (22%)
Query: 79 ESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRC 138
+SLS+ CR + TD GL V +GCP L +SL +C
Sbjct: 328 KSLSVMSCRGM--------------------------TDVGLEAVGNGCPDLKHVSLNKC 361
Query: 139 LGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHC-RQLQAVNISHCDSITGI- 196
L V+ KGL LA + LSL+ + + C +I+ GL +C +L+A ++++C I+
Sbjct: 362 LLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLMNCGSKLKAFSLANCLGISDFN 421
Query: 197 ----------------------GFGGCSKTLA---CVEAESCKLTPEGVMGIVSGGGMEY 231
GFG S C + + +L G+ G+ G E
Sbjct: 422 SESSLPSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDVELC--GLNGVTDAGVREL 479
Query: 232 LDVSCLSW---------SVLGDPLSGIGF--SSRLKILNFRLCRTVSDTSVVAIAKGCPL 280
L + + +V + +S I L+ LN C+ +++ S+VA+AK C
Sbjct: 480 LQSNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNLDGCKNITNASLVAVAKNCYS 539
Query: 281 LEEWNLALCNEVRISGWQAVGLYCR--NLKRLHVNRCHNLSDGGLLALQDGCRSLTILYL 338
+ + +++ V G +A+ NL+ L + C +++D +Q R+L L +
Sbjct: 540 VNDLDIS-NTLVSDHGIKALASSPNHLNLQVLSIGGCSSITDKSKACIQKLGRTLLGLNI 598
Query: 339 SGCSRLTS 346
C R++S
Sbjct: 599 QRCGRISS 606
>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
chr2:10848018-10850275 REVERSE LENGTH=628
Length = 628
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 150/360 (41%), Gaps = 34/360 (9%)
Query: 3 LPDDCLTIIFHALDSRTDRESFGLTCRRWLH-IQDFNRRSLQFECSFTV--------LTR 53
LPD+CL IF L +R + ++WL + ++ + T L+R
Sbjct: 67 LPDECLFEIFRRLSGPQERSACAFVSKQWLTLVSSIRQKEIDVPSKITEDGDDCEGCLSR 126
Query: 54 TSLSGKSFDIXXXXXXXXXXXXXXXESLSLCGCR--ELSDSGLTRLLTYGSNLQKLYLDC 111
+ K+ D+ LS+ G ++SD GL + +L L L
Sbjct: 127 SLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWN 186
Query: 112 CFKVTDYGLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKG 171
+TD GL +A GC L + L RC +TDKGL +A +C +L + + C++I D+G
Sbjct: 187 VSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEG 246
Query: 172 LKTLTEHCRQLQAVNISHCDSITGIGFGGCSKTLACVEAESCKLTPEGVMGIVSGGGMEY 231
L + C +L++V+I +C + G C A KL ++
Sbjct: 247 LLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLA---KLK------------LQM 291
Query: 232 LDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAIAKGCPL--LEEWNLALC 289
L+V+ +S +V+G + + L VS+ + G L L + C
Sbjct: 292 LNVTDVSLAVVGH------YGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITAC 345
Query: 290 NEVRISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIAL 349
V G ++VG C N+K+ +++ LSD GL++ SL L L C R+T
Sbjct: 346 QGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGF 405
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 26/266 (9%)
Query: 88 ELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGC--PSLTTISLYRCLGVTDKG 145
++D L + YG ++ L L V++ G ++ +G L ++++ C GVTD G
Sbjct: 293 NVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMG 352
Query: 146 LETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGFGGCSKTL 205
LE++ C ++K IS +SD GL + + L+++ + C +T GF G L
Sbjct: 353 LESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFG--SLL 410
Query: 206 ACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRT 265
C E KL + V+CLS L L S L+ L+ R C
Sbjct: 411 NCGE----KLK-------------AFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNCPG 453
Query: 266 VSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLA 325
D ++ AI K CP LE+ +L + SG+ + L +L +++ + C NL+D + A
Sbjct: 454 FGDANLAAIGKLCPQLEDIDLCGLKGITESGF--LHLIQSSLVKINFSGCSNLTDRVISA 511
Query: 326 L--QDGCRSLTILYLSGCSRLTSIAL 349
+ ++G +L +L + GCS +T +L
Sbjct: 512 ITARNGW-TLEVLNIDGCSNITDASL 536
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 81 LSLCGCRELSDSGLTRLLTY-GSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCL 139
++ GC L+D ++ + G L+ L +D C +TD L +A+ C L+ + + +C
Sbjct: 496 INFSGCSNLTDRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKC- 554
Query: 140 GVTDKGLETLASA-CLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSIT 194
++D G++ LAS+ L L+ ++++ C+ ++DK L + L +N+ C SI+
Sbjct: 555 AISDSGIQALASSDKLKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSIS 610
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE LENGTH=642
Length = 642
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 10/277 (3%)
Query: 81 LSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCLG 140
+ L C +++D G+ L NL+ L L CC VTD +S VA C +L T+ L C
Sbjct: 330 IGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHL 389
Query: 141 VTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGF-- 198
+T+KGL++L + ++ ++++ C ++D+GL+ +++ C LQ + + C +I+ G
Sbjct: 390 ITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEYISK-CSNLQRLKLGLCTNISDKGIFH 448
Query: 199 --GGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSW--SVLGDPLSGIGFSSR 254
CSK L +G+ + G + L+ LS+ + + I
Sbjct: 449 IGSKCSKLLELDLYRCAGFGDDGLAAL--SRGCKSLNRLILSYCCELTDTGVEQIRQLEL 506
Query: 255 LKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHVNR 314
L L R + ++ + AIA GC L ++ LC + SG+ A+ + +NL+++++
Sbjct: 507 LSHLELRGLKNITGVGLAAIASGCKKLGYLDVKLCENIDDSGFWALAYFSKNLRQINLCN 566
Query: 315 CHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIALEL 351
C ++SD L L + + L SR+T E
Sbjct: 567 C-SVSDTALCMLMSNLSRVQDVDLVHLSRVTVEGFEF 602
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 34/284 (11%)
Query: 98 LTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLK 157
L+ + L++L +D C ++D GL+ + GC +L ISL C+ ++D G++ L C LK
Sbjct: 142 LSSATGLRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWCMEISDLGIDLLCKICKGLK 201
Query: 158 CVNISY------------------------CTQISDKGLKTLTEHCRQLQAVNISHCDSI 193
+++SY C I D GL+ L LQ V+++ CD +
Sbjct: 202 SLDVSYLKITNDSIRSIALLVKLEVLDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDRV 261
Query: 194 TGIGFGGCSK---TLACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIG 250
+ G + + ++A C G + G+++L + + + D
Sbjct: 262 SLSGLISIVRGHPDIQLLKASHCVSEVSGSF-LKYIKGLKHLKTIWIDGAHVSDSSLVSL 320
Query: 251 FSSRLKILNFRL--CRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLK 308
SS ++ L C V+D ++++A+ C L+ NLA C V AV CRNL
Sbjct: 321 SSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLG 380
Query: 309 RLHVNRCHNLSDGGLLALQDGCRSLTI--LYLSGCSRLTSIALE 350
L + CH +++ GL +L GC S+ + L L+ C + LE
Sbjct: 381 TLKLESCHLITEKGLQSL--GCYSMLVQELDLTDCYGVNDRGLE 422
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 48/221 (21%)
Query: 133 ISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDS 192
I L RC+ VTD G+ +LA CL+LK +N++ C ++D + + + CR L + + C
Sbjct: 330 IGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHL 389
Query: 193 ITGIGFGGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFS 252
IT G ++L C +S
Sbjct: 390 ITEKGL----QSLGC-------------------------------------------YS 402
Query: 253 SRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHV 312
++ L+ C V+D + I+K C L+ L LC + G +G C L L +
Sbjct: 403 MLVQELDLTDCYGVNDRGLEYISK-CSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDL 461
Query: 313 NRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIALELFK 353
RC D GL AL GC+SL L LS C LT +E +
Sbjct: 462 YRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIR 502
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 36/226 (15%)
Query: 79 ESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRC 138
+ L L C ++D GL ++ SNLQ+L L C ++D G+ + S C L + LYRC
Sbjct: 406 QELDLTDCYGVNDRGL-EYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRC 464
Query: 139 LGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCD-----SI 193
G D GL L+ C SL + +SYC +++D G+ E RQL+ +SH + +I
Sbjct: 465 AGFGDDGLAALSRGCKSLNRLILSYCCELTDTGV----EQIRQLEL--LSHLELRGLKNI 518
Query: 194 TGIGFGGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIG-FS 252
TG+G A CK + YLDV L ++ + FS
Sbjct: 519 TGVGLAAI--------ASGCK-------------KLGYLDVK-LCENIDDSGFWALAYFS 556
Query: 253 SRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQ 298
L+ +N C +VSDT++ + +++ +L + V + G++
Sbjct: 557 KNLRQINLCNC-SVSDTALCMLMSNLSRVQDVDLVHLSRVTVEGFE 601
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 14/272 (5%)
Query: 79 ESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTD-YGLSLVASGCPS---LTTIS 134
+SL+ R L L LL NL L L C K+ D L L G S + +++
Sbjct: 42 DSLTRTTIRILRVEFLPTLLFKYPNLSSLDLSVCPKLDDDVVLRLALDGAISTLGIKSLN 101
Query: 135 LYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSIT 194
L R V +GLETLA C +L+ V++S+C D+ L+ L+ + + C S++
Sbjct: 102 LSRSTAVRARGLETLARMCHALERVDVSHCWGFGDREAAALSS-ATGLRELKMDKCLSLS 160
Query: 195 GIGFG----GCSKTLACVEAESCKLTPEGVMGIVSG--GGMEYLDVSCLSWSVLGDPLSG 248
+G GCS L + + C + + ++ G++ LDVS L + D +
Sbjct: 161 DVGLARIVVGCS-NLNKISLKWCMEISDLGIDLLCKICKGLKSLDVSYLK--ITNDSIRS 217
Query: 249 IGFSSRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLK 308
I +L++L+ C + D + + G P L+E ++ C+ V +SG ++ +++
Sbjct: 218 IALLVKLEVLDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDRVSLSGLISIVRGHPDIQ 277
Query: 309 RLHVNRCHNLSDGGLLALQDGCRSLTILYLSG 340
L + C + G L G + L +++ G
Sbjct: 278 LLKASHCVSEVSGSFLKYIKGLKHLKTIWIDG 309
>AT5G01720.1 | Symbols: | RNI-like superfamily protein |
chr5:267118-270391 REVERSE LENGTH=665
Length = 665
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 139/351 (39%), Gaps = 82/351 (23%)
Query: 79 ESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYR- 137
E L L C+ L+D G+ + L + L C V D G+ L+A C + T+ L
Sbjct: 153 ERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGVGDLGVGLLAVKCKDIRTLDLSYL 212
Query: 138 -----------------------CLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKT 174
C GV D L++L C SLK ++ S C ++ +GL +
Sbjct: 213 PITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRGLTS 272
Query: 175 LTEHCRQLQAVNISHCDSITGIGFGGCSKTLACVEA---ESCKLTPEGVMGIVSGGGMEY 231
L LQ +++SHC S+ + F K ++ +++ + C +TP+G+ I G
Sbjct: 273 LLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSIRLDGCSVTPDGLKAI--GTLCNS 330
Query: 232 LDVSCLS--WSVLGDPLSGIGFSSR-LKILNFRLCRTVSDTSVVAIAKGCPLL------- 281
L LS SV + LS + + L+ L+ CR +S S+ IA CPLL
Sbjct: 331 LKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMES 390
Query: 282 -------------------EEWNL------------------------ALCNEVRISGWQ 298
EE +L +C + G
Sbjct: 391 CSLVSREAFWLIGQKCRLLEELDLTDNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLS 450
Query: 299 AVGLYCRNLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIAL 349
+G+ C NL+ L + R ++D G+ + GC L + +S C +T +L
Sbjct: 451 YIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDITDKSL 501
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 48/214 (22%)
Query: 112 CFKVTDYGLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKG 171
C +TD GLS + GC +L + LYR +G+TD G+ T+A C+ L+ +NISYC I+DK
Sbjct: 441 CLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDITDKS 500
Query: 172 LKTLTEHCRQLQAVNISHCDSITGIGFGGCS---KTLACVEAESCK-LTPEGVMGIVSGG 227
L +L++ C LQ C +IT G + K LA V+ + C + G++ +
Sbjct: 501 LVSLSK-CSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAGLLALAH-- 557
Query: 228 GMEYLDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAIA------KGCPLL 281
FS LK +N VSDT+V + GC
Sbjct: 558 -----------------------FSQNLKQIN------VSDTAVTEVGLLSLANIGCL-- 586
Query: 282 EEWNLALCNE--VRISGWQAVGLYCRNLKRLHVN 313
N+A+ N +R SG A L C L++ ++
Sbjct: 587 --QNIAVVNSSGLRPSGVAAALLGCGGLRKAKLH 618
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 58/266 (21%)
Query: 103 NLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNIS 162
+L++L L C +TD G+ +A GC L T+SL C+GV D G+ LA C ++ +++S
Sbjct: 151 SLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGVGDLGVGLLAVKCKDIRTLDLS 210
Query: 163 Y------------------------CTQISDKGLKTLTEHCRQ----------------- 181
Y C + D LK+L C+
Sbjct: 211 YLPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRGL 270
Query: 182 ---------LQAVNISHCDSITGIGFGGCSKTLACVEA---ESCKLTPEGVMGIVSGGGM 229
LQ +++SHC S+ + F K ++ +++ + C +TP+G+ I G
Sbjct: 271 TSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSIRLDGCSVTPDGLKAI--GTLC 328
Query: 230 EYLDVSCLS--WSVLGDPLSGIGFSSR-LKILNFRLCRTVSDTSVVAIAKGCPLLEEWNL 286
L LS SV + LS + + L+ L+ CR +S S+ IA CPLL +
Sbjct: 329 NSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKM 388
Query: 287 ALCNEVRISGWQAVGLYCRNLKRLHV 312
C+ V + +G CR L+ L +
Sbjct: 389 ESCSLVSREAFWLIGQKCRLLEELDL 414
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 86 CRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCLGVTDKG 145
C ++D GL+ + SNL++L L +TD G+S +A GC L TI++ C +TDK
Sbjct: 441 CLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDITDKS 500
Query: 146 LETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIG---FGGCS 202
L +L S C L+ C I+ +GL + C++L V++ C SI G S
Sbjct: 501 LVSL-SKCSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAGLLALAHFS 559
Query: 203 KTLACVEAESCKLTPEGVMGIVSGGGMEYLDV 234
+ L + +T G++ + + G ++ + V
Sbjct: 560 QNLKQINVSDTAVTEVGLLSLANIGCLQNIAV 591
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 142/329 (43%), Gaps = 62/329 (18%)
Query: 87 RELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGC---PSLTTISLYRCLGVTD 143
+ L L R+LT N L L C +VTDY LS+V GC P+L ++ L R +
Sbjct: 57 KPLRSDYLPRILTRYRNTTDLDLTFCPRVTDYALSVV--GCLSGPTLRSLDLSRSGSFSA 114
Query: 144 KGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGFG---- 199
GL LA C++L +++S T++ D + E R L+ + + C +T +G G
Sbjct: 115 AGLLRLALKCVNLVEIDLSNATEMRDADAAVVAEA-RSLERLKLGRCKMLTDMGIGCIAV 173
Query: 200 GCSKTLACVEAESCKLTPEGVMGI--VSGGGMEYLDVSCLS------------------- 238
GC K L V + C + +G+ V + LD+S L
Sbjct: 174 GCKK-LNTVSLKWCVGVGDLGVGLLAVKCKDIRTLDLSYLPITGKCLHDILKLQHLEELL 232
Query: 239 ----WSVLGDPLSGIGFSSR-LKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEV- 292
+ V D L + + LK L+ C+ ++ + ++ G L+ +L+ C+ V
Sbjct: 233 LEGCFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVI 292
Query: 293 ---------RIS---------------GWQAVGLYCRNLKRLHVNRCHNLSDGGLLALQD 328
++S G +A+G C +LK + +++C +++D GL +L
Sbjct: 293 SLDFASSLKKVSALQSIRLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVM 352
Query: 329 GCRSLTILYLSGCSRLTSIALELFKSHRP 357
+ L L ++ C +L+ +++ + P
Sbjct: 353 KLKDLRKLDITCCRKLSRVSITQIANSCP 381
>AT3G58530.1 | Symbols: | RNI-like superfamily protein |
chr3:21645759-21648219 FORWARD LENGTH=353
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 103 NLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNIS 162
+L+ L L+ C K++D G+ + S CP L S+Y + VTD G+ L C + +N+S
Sbjct: 112 SLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLS 171
Query: 163 YCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGFGGCSKTLACVEAESCKL------T 216
C ++DK ++ + E L+++NI+ C IT G + C ++ L T
Sbjct: 172 GCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVLQ--KCFSLQTLNLYALSGFT 229
Query: 217 PEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAIAK 276
+ M I + +LD+ C + ++ + + I ++L+ LN C ++D V IA
Sbjct: 230 DKAYMKISLLADLRFLDI-CGAQNISDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIAN 288
Query: 277 GCPLLE 282
C LE
Sbjct: 289 SCTSLE 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 126/278 (45%), Gaps = 43/278 (15%)
Query: 87 RELSDSGLTRLLTYGS-----NLQKLYLDCCFKVTDYGLSLVASGCP----SLTTISLYR 137
RE++++G RLL S ++ + L+ V D L LV + CP SL ++L
Sbjct: 62 REMTNAG-DRLLAALSLPRYRQVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNV 120
Query: 138 CLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIG 197
C ++D G+E + S C LK +I + +++D G++ L ++CR + +N+S C S+T
Sbjct: 121 CQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKS 180
Query: 198 FGGCSKTLACVEAES----CKLTPEGVMGIVSG-GGMEYLDVSCLSWSVLGDPLSGIGFS 252
+++ +E+ + K+T +G++ ++ ++ L++ LS I
Sbjct: 181 MQLVAESYPDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALS-GFTDKAYMKISLL 239
Query: 253 SRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHV 312
+ L+ L+ + +SD + IAK C L+ L++
Sbjct: 240 ADLRFLDICGAQNISDEGIGHIAK---------------------------CNKLESLNL 272
Query: 313 NRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIALE 350
C ++D G+ + + C SL L L G +T LE
Sbjct: 273 TWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTDRCLE 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
Query: 81 LSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCLG 140
L+L GC+ L+D + + +L+ L + C K+TD GL V C SL T++LY G
Sbjct: 168 LNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALSG 227
Query: 141 VTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGFGG 200
TDK + S L+ ++I ISD+G+ + + C +L+++N++ C IT G
Sbjct: 228 FTDKAYMKI-SLLADLRFLDICGAQNISDEGIGHIAK-CNKLESLNLTWCVRITDAGVNT 285
Query: 201 CSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSC 236
+ + +E L+ G++G V+ +E L +C
Sbjct: 286 IANSCTSLEF----LSLFGIVG-VTDRCLETLSQTC 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 81 LSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCLG 140
L +CG + +SD G+ + + L+ L L C ++TD G++ +A+ C SL +SL+ +G
Sbjct: 245 LDICGAQNISDEGIGHI-AKCNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVG 303
Query: 141 VTDKGLETLASAC-LSLKCVNISYCTQISDKGLKTLTEHCRQL 182
VTD+ LETL+ C +L ++++ CT I + + L + +L
Sbjct: 304 VTDRCLETLSQTCSTTLTTLDVNGCTGIKRRSREELLQMFPRL 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 254 RLKILNFRLCRTVSDTSVVAIAKGCP---LLEEW-NLALCNEVRISGWQAVGLYCRNLKR 309
++K +N + V D+ + + CP L EW NL +C ++ +G +A+ C LK
Sbjct: 82 QVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKV 141
Query: 310 LHVNRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIALELFKSHRPDV 359
+ ++D G+ L CR +T L LSGC LT +++L PD+
Sbjct: 142 FSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDL 191
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 40/247 (16%)
Query: 133 ISLYRCLGVTDKGLETLASAC----LSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNI- 187
I+L GV D L+ + + C LSL+ +N++ C +ISD G++ +T C +L+ +I
Sbjct: 86 INLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIY 145
Query: 188 --------------SHCDSITGIGFGGCS----KTLACVEAES------------CKLTP 217
+C IT + GC K++ V AES K+T
Sbjct: 146 WNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLV-AESYPDLESLNITRCVKITD 204
Query: 218 EGVMGIVSG-GGMEYLDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAIAK 276
+G++ ++ ++ L++ LS I + L+ L+ + +SD + IAK
Sbjct: 205 DGLLQVLQKCFSLQTLNLYALS-GFTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAK 263
Query: 277 GCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLALQDGCR-SLTI 335
C LE NL C + +G + C +L+ L + ++D L L C +LT
Sbjct: 264 -CNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTDRCLETLSQTCSTTLTT 322
Query: 336 LYLSGCS 342
L ++GC+
Sbjct: 323 LDVNGCT 329
>AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 |
chr1:17276103-17277659 REVERSE LENGTH=518
Length = 518
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 138/356 (38%), Gaps = 60/356 (16%)
Query: 3 LPDDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSLQFECSFTVLTRTSLSGKSFD 62
LPD+CL ++F L+S +R+ L CRRW+ ++ NR L ++T FD
Sbjct: 43 LPDECLALVFQFLNS-GNRKRCALVCRRWMIVEGQNRYRLSLHARSDLITSIPSLFSRFD 101
Query: 63 IXXXXXXXXXXXXXXXESLSL-CGCRELS--DSGLTRLLTYGSNLQKLYLDCCFKVTDYG 119
LSL C R +S D L ++ NL++L L C ++TD G
Sbjct: 102 --------------SVTKLSLKCDRRSVSIGDEALVKISLRCRNLKRLKLRACRELTDVG 147
Query: 120 LSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHC 179
++ A C L S C KG+K + +HC
Sbjct: 148 MAAFAENCKDLKIFSCGSC---------------------------DFGAKGVKAVLDHC 180
Query: 180 RQLQAVNISHCDSITGIGFGGCSKTLACVEAESC---KLTPEGVMGIVSGGGMEYLDVSC 236
L+ ++I T I +A +S +L G V G +
Sbjct: 181 SNLEELSIKRLRGFTDIAPEMIGPGVAASSLKSICLKELYNGQCFGPVIVGAKNLKSLKL 240
Query: 237 L----SWSVLGDPLSGIGFSSRLKILNFRLCR-TVSDTSVVAIAKGCPLLEEWNLALCNE 291
W +L +SG ++ L R VSD ++ AI+ C LE +L E
Sbjct: 241 FRCSGDWDLLLQEMSGKDHG----VVEIHLERMQVSDVALSAISY-CSSLESLHLVKTPE 295
Query: 292 VRISGWQAVGLYCRNLKRLHVN--RCHNLSDGGLLALQDGCRSLTILYLSGCSRLT 345
G A+ C+ L++LH++ + + + D GL+A+ C L L L G + T
Sbjct: 296 CTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQELVLIGVNPTT 351
>AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 |
chr3:18572788-18574356 FORWARD LENGTH=522
Length = 522
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 158/375 (42%), Gaps = 65/375 (17%)
Query: 2 HLPDDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSLQFECSFTVLTRTSLSGKSF 61
+LPDDCL IF L S DR+ L +RWL + NR R SL KS
Sbjct: 43 NLPDDCLAHIFQFL-SAGDRKRCSLVSKRWLLVDGQNRH------------RLSLDAKS- 88
Query: 62 DIXXXXXXXXXXXXXXXESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDC---CFKVTDY 118
E L C + ++ KL L C F ++D
Sbjct: 89 -----------------EILPFLPC----------IFNRFDSVTKLALRCDRRSFSLSDE 121
Query: 119 GLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEH 178
L +V+ C +L + L C +TD G+E+ A C SL+ ++ CT KG+ + EH
Sbjct: 122 ALFIVSIRCSNLIRVKLRGCREITDLGMESFARNCKSLRKLSCGSCT-FGAKGINAMLEH 180
Query: 179 CRQLQAVNISHCDSITGIGFGGCSKTLACVEAESCKLTPEGVMGIVSGGGM------EYL 232
C+ L+ +++ I G+ L+ + E V G V G + +
Sbjct: 181 CKVLEELSLKR---IRGLHELAEPIKLSLSASLRSVFLKELVNGQVFGSLVATRTLKKVK 237
Query: 233 DVSCL-SWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNE 291
+ CL +W + + ++G G SS +I RL V+D + I+K C LE ++ +
Sbjct: 238 IIRCLGNWDRVFE-MNGNGNSSLTEIRLERL--QVTDIGLFGISK-CSNLETLHIVKTPD 293
Query: 292 VRISGWQAVGLYCRNLKRLHVN--RCHNLSDGGLLALQDGCRSLTILYLSGCS----RLT 345
G +V C+ L++LH++ R + D GL+++ C +L L L G L+
Sbjct: 294 CSNLGLASVVERCKLLRKLHIDGWRVKRIGDQGLMSVAKHCLNLQELVLIGVDATYMSLS 353
Query: 346 SIALELFKSHRPDVC 360
+IA K R +C
Sbjct: 354 AIASNCKKLERLALC 368
>AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting protein
2 | chr5:26831677-26833260 REVERSE LENGTH=527
Length = 527
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 152/356 (42%), Gaps = 65/356 (18%)
Query: 3 LPDDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSLQFECSFTVLTRTSLSGKSFD 62
LPD+CL +F L + DR+ L C+RWL + +R R SL K
Sbjct: 46 LPDECLAHVFQFLGA-GDRKRCSLVCKRWLLVDGQSRH------------RLSLDAKD-- 90
Query: 63 IXXXXXXXXXXXXXXXESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFK---VTDYG 119
E+S S LT + ++ KL L C K ++D
Sbjct: 91 -------------------------EIS-SFLTSMFNRFDSVTKLALRCDRKSVSLSDEA 124
Query: 120 LSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHC 179
L++++ C +LT + L C +TD G+E A C +LK +++ C KG+ + EHC
Sbjct: 125 LAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSC-NFGAKGVNAMLEHC 183
Query: 180 RQLQAVNISHCDSITGIGFGGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSW 239
+ L+ +++ + GI L +A S L + +V+G E L + +
Sbjct: 184 KLLEELSVKR---LRGIHEAAELIHLP-DDASSSSLRSICLKELVNGQVFEPLLATTRTL 239
Query: 240 SV------LGD-----PLSGIGFSSRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLAL 288
LGD + G SS +I RL VSD + AI+K C +E ++
Sbjct: 240 KTLKIIRCLGDWDKVLQMIANGKSSLSEIHLERL--QVSDIGLSAISK-CSNVETLHIVK 296
Query: 289 CNEVRISGWQAVGLYCRNLKRLHVN--RCHNLSDGGLLALQDGCRSLTILYLSGCS 342
E G V C+ L++LH++ R + + D GLL++ C +L L L G +
Sbjct: 297 TPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAKHCLNLQELVLIGVN 352
>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
chr1:7497479-7499386 FORWARD LENGTH=360
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 70/258 (27%)
Query: 114 KVTDYGLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLK 173
++ D + +A+ C L + L + L +TD+ L LA C L +N+S CT SD +
Sbjct: 103 QLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIA 162
Query: 174 TLTEHCRQLQAVNISHCDSITGIGFGGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLD 233
LT CR+L+ +N+ CV+A V+ +E +
Sbjct: 163 YLTRFCRKLKVLNLC-----------------GCVKA-------------VTDNALEAIG 192
Query: 234 VSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVR 293
+C ++++ LN C +SD V+++A GCP L +L C +
Sbjct: 193 NNC----------------NQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLIT 236
Query: 294 ISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLAL---------------------QDGCRS 332
A+ +C +L+ L + C N++D + +L ++G RS
Sbjct: 237 DESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLRS 296
Query: 333 LTILYLSGCSRLTSIALE 350
L I S C+ LT A++
Sbjct: 297 LNI---SQCTALTPSAVQ 311
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 81 LSLCGC-RELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCL 139
L+LCGC + ++D+ L + + +Q L L C ++D G+ +A GCP L T+ L C+
Sbjct: 174 LNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCV 233
Query: 140 GVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTE 177
+TD+ + LA C+ L+ + + YC I+D+ + +L +
Sbjct: 234 LITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQ 271
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 81 LSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFK-VTDYGLSLVASGCPSLTTISLYRCL 139
L+L GC SD+ + L + L+ L L C K VTD L + + C + +++L C
Sbjct: 148 LNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCE 207
Query: 140 GVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSIT 194
++D G+ +LA C L+ +++ C I+D+ + L + C L+++ + +C +IT
Sbjct: 208 NISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNIT 262
>AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein |
chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 120/292 (41%), Gaps = 71/292 (24%)
Query: 81 LSLCGCRELSDSGLTRLLTYGSNLQKLYL-DCCFKVTDYGLSLVASGCPSLTTISLYRCL 139
LSL C++ +S + L LQ L L ++ D + +A+ C L + L +
Sbjct: 69 LSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSS 128
Query: 140 GVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGFG 199
+TD L +LA C +L +N+S CT SD L LT CR+L+ +N+
Sbjct: 129 KITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLC----------- 177
Query: 200 GCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFSSRLKILN 259
CVEA VS ++ + +C ++L+ LN
Sbjct: 178 ------GCVEA-------------VSDNTLQAIGENC----------------NQLQSLN 202
Query: 260 FRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHVNRCHNLS 319
C +SD V+++A GCP L +L C + A+ C +L+ L + C N++
Sbjct: 203 LGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNIT 262
Query: 320 DGGLLAL---------------------QDGCRSLTILYLSGCSRLTSIALE 350
D + +L ++G RSL I S C+ LT A++
Sbjct: 263 DRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSLNI---SQCTYLTPSAVQ 311
>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily
protein | chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 120/292 (41%), Gaps = 71/292 (24%)
Query: 81 LSLCGCRELSDSGLTRLLTYGSNLQKLYL-DCCFKVTDYGLSLVASGCPSLTTISLYRCL 139
LSL C++ +S + L LQ L L ++ D + +A+ C L + L +
Sbjct: 69 LSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSS 128
Query: 140 GVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGFG 199
+TD L +LA C +L +N+S CT SD L LT CR+L+ +N+
Sbjct: 129 KITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLC----------- 177
Query: 200 GCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFSSRLKILN 259
CVEA VS ++ + +C ++L+ LN
Sbjct: 178 ------GCVEA-------------VSDNTLQAIGENC----------------NQLQSLN 202
Query: 260 FRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHVNRCHNLS 319
C +SD V+++A GCP L +L C + A+ C +L+ L + C N++
Sbjct: 203 LGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNIT 262
Query: 320 DGGLLAL---------------------QDGCRSLTILYLSGCSRLTSIALE 350
D + +L ++G RSL I S C+ LT A++
Sbjct: 263 DRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSLNI---SQCTYLTPSAVQ 311
>AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein |
chr2:16672848-16675486 REVERSE LENGTH=592
Length = 592
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 158/396 (39%), Gaps = 47/396 (11%)
Query: 5 DDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSLQFECSFTV-----------LTR 53
DD + + + DR+S L CRRW I R + +T L
Sbjct: 18 DDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRS 77
Query: 54 TSLSGKS----FDIXXXXXXXXXXXXXXXESLSLCGCREL-------SDSGLTRLL-TYG 101
L GK F++ S +L + + SD L RL
Sbjct: 78 LKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARA 137
Query: 102 SNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCLGVTDKG--LETLASACLSLKCV 159
+L+ L LD C T GL + + C + T+ + G L LA SL+ +
Sbjct: 138 DDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVL 197
Query: 160 N--ISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGFGGCSKTLACVEAESCKL-- 215
N ++ +IS K L+T+ +CR L +V + + + +GF + L S
Sbjct: 198 NFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDI 257
Query: 216 -TPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAI 274
PE M +V + L +S + + + P+ F+++++ L+ ++ I
Sbjct: 258 GMPEKYMNLVFPRKLCRLGLSYMGPNEM--PIL-FPFAAQIRKLDLLYALLETEDHCTLI 314
Query: 275 AKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHVNRCHN----------LSDGGLL 324
K CP LE L N + G + + YC+ LKRL + R + +S GL+
Sbjct: 315 QK-CPNLE--VLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371
Query: 325 ALQDGCRSLTILYLSGCSRLTSIALELFKSHRPDVC 360
AL GC+ L + + S +T+ +LE ++ ++C
Sbjct: 372 ALAQGCQELEYMAVY-VSDITNESLESIGTYLKNLC 406
>AT1G80570.1 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 136/333 (40%), Gaps = 61/333 (18%)
Query: 2 HLPDDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSLQFECSFTVLTRTSLSGKSF 61
LPD + I L + DR S L+C+R+ + + R SL+ C + LS
Sbjct: 3 ELPDHLVWDILSKLHTTDDRNSLSLSCKRFFSLDNEQRYSLRIGCGLVPASDALLS---- 58
Query: 62 DIXXXXXXXXXXXXXXXESLSLCGCRELSDSGLTRLLTYG--SNLQKLYLDCCFKVTDYG 119
CR + ++ G S L K +V D G
Sbjct: 59 -----------------------LCRRFPNLSKVEIIYSGWMSKLGK-------QVDDQG 88
Query: 120 LSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHC 179
L ++ + C SLT ++L C +TD G+ L S+C L + +++ +I+ G+ +L C
Sbjct: 89 LLVLTTNCHSLTDLTLSFCTFITDVGIGHL-SSCPELSSLKLNFAPRITGCGVLSLAVGC 147
Query: 180 RQLQAVNISHC---DSITGIGFGGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSC 236
++L+ +++ C S+ + + G +TL + ++C+ EG + +
Sbjct: 148 KKLRRLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLIKLRN---------- 197
Query: 237 LSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAIAK---GCPLLEEWNLALCNEVR 293
SW L+ + F N+R + V K C L E +L C
Sbjct: 198 -SWR----KLTSLQFEVD---ANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNCIIAP 249
Query: 294 ISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLAL 326
G V C+NL++LH++ C +SD ++AL
Sbjct: 250 GRGLACVLRNCKNLEKLHLDMCTGVSDSDIIAL 282
>AT1G80570.3 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 136/333 (40%), Gaps = 61/333 (18%)
Query: 2 HLPDDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSLQFECSFTVLTRTSLSGKSF 61
LPD + I L + DR S L+C+R+ + + R SL+ C + LS
Sbjct: 3 ELPDHLVWDILSKLHTTDDRNSLSLSCKRFFSLDNEQRYSLRIGCGLVPASDALLS---- 58
Query: 62 DIXXXXXXXXXXXXXXXESLSLCGCRELSDSGLTRLLTYG--SNLQKLYLDCCFKVTDYG 119
CR + ++ G S L K +V D G
Sbjct: 59 -----------------------LCRRFPNLSKVEIIYSGWMSKLGK-------QVDDQG 88
Query: 120 LSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHC 179
L ++ + C SLT ++L C +TD G+ L S+C L + +++ +I+ G+ +L C
Sbjct: 89 LLVLTTNCHSLTDLTLSFCTFITDVGIGHL-SSCPELSSLKLNFAPRITGCGVLSLAVGC 147
Query: 180 RQLQAVNISHC---DSITGIGFGGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSC 236
++L+ +++ C S+ + + G +TL + ++C+ EG + +
Sbjct: 148 KKLRRLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLIKLRN---------- 197
Query: 237 LSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAIAK---GCPLLEEWNLALCNEVR 293
SW L+ + F N+R + V K C L E +L C
Sbjct: 198 -SWR----KLTSLQFEVD---ANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNCIIAP 249
Query: 294 ISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLAL 326
G V C+NL++LH++ C +SD ++AL
Sbjct: 250 GRGLACVLRNCKNLEKLHLDMCTGVSDSDIIAL 282
>AT1G80570.2 | Symbols: | RNI-like superfamily protein |
chr1:30290661-30292231 FORWARD LENGTH=480
Length = 480
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 136/333 (40%), Gaps = 61/333 (18%)
Query: 2 HLPDDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSLQFECSFTVLTRTSLSGKSF 61
LPD + I L + DR S L+C+R+ + + R SL+ C + LS
Sbjct: 16 ELPDHLVWDILSKLHTTDDRNSLSLSCKRFFSLDNEQRYSLRIGCGLVPASDALLS---- 71
Query: 62 DIXXXXXXXXXXXXXXXESLSLCGCRELSDSGLTRLLTYG--SNLQKLYLDCCFKVTDYG 119
CR + ++ G S L K +V D G
Sbjct: 72 -----------------------LCRRFPNLSKVEIIYSGWMSKLGK-------QVDDQG 101
Query: 120 LSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHC 179
L ++ + C SLT ++L C +TD G+ L S+C L + +++ +I+ G+ +L C
Sbjct: 102 LLVLTTNCHSLTDLTLSFCTFITDVGIGHL-SSCPELSSLKLNFAPRITGCGVLSLAVGC 160
Query: 180 RQLQAVNISHC---DSITGIGFGGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSC 236
++L+ +++ C S+ + + G +TL + ++C+ EG + +
Sbjct: 161 KKLRRLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLIKLRN---------- 210
Query: 237 LSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAIAK---GCPLLEEWNLALCNEVR 293
SW L+ + F N+R + V K C L E +L C
Sbjct: 211 -SWR----KLTSLQFEVD---ANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNCIIAP 262
Query: 294 ISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLAL 326
G V C+NL++LH++ C +SD ++AL
Sbjct: 263 GRGLACVLRNCKNLEKLHLDMCTGVSDSDIIAL 295
>AT4G33210.1 | Symbols: SLOMO | F-box family protein |
chr4:16015971-16020697 REVERSE LENGTH=990
Length = 990
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 51/275 (18%)
Query: 89 LSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCLGVTDKGLET 148
L S +++ + LQ L + C K+ D + A CP L ++ + C V+D+ L
Sbjct: 356 LKRSNMSQAMLNCPLLQLLDIASCHKLLDAAIRSAAISCPQLESLDVSNCSCVSDETLRE 415
Query: 149 LASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGFG--GCSKTLA 206
+A AC +L +N SYC IS + + H L + + C+ IT S L
Sbjct: 416 IAQACANLHILNASYCPNISLESV-----HLPMLTVLKLHSCEGITSASMTWIANSPALE 470
Query: 207 CVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTV 266
+E ++C L + + SRL+ ++ CR
Sbjct: 471 VLELDNCNLLTTVSLHL-----------------------------SRLQSISLVHCRKF 501
Query: 267 SDTSVVAI------AKGCPLLEEWNLALCNEVRISGWQ------AVGLYCRNLKRLHVNR 314
+D ++ +I CP L + N +R Q + L C +L+ + ++
Sbjct: 502 TDLNLQSIMLSSITVSNCPALRRITIT-SNALRRLALQKQENLTTLVLQCHSLQEVDLSD 560
Query: 315 CHNLSDGGLLALQD--GCRSLTILYLSGCSRLTSI 347
C +LS+ D GC L L L C LT++
Sbjct: 561 CESLSNSVCKIFSDDGGCPMLKSLILDNCESLTAV 595
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 38/274 (13%)
Query: 94 LTRLLTYGSNLQKLYLDCCFKVTDYGL------SLVASGCPSL-----TTISLYRCLGVT 142
LT + + S LQ + L C K TD L S+ S CP+L T+ +L R
Sbjct: 480 LTTVSLHLSRLQSISLVHCRKFTDLNLQSIMLSSITVSNCPALRRITITSNALRRLALQK 539
Query: 143 DKGLETLASACLSLKCVNISYCTQISDKGLKTLTEH--CRQLQAVNISHCDSITGIGFGG 200
+ L TL C SL+ V++S C +S+ K ++ C L+++ + +C+S+T + F
Sbjct: 540 QENLTTLVLQCHSLQEVDLSDCESLSNSVCKIFSDDGGCPMLKSLILDNCESLTAVRF-- 597
Query: 201 CSKTLACVEAESCKLTPE-----GVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFSSRL 255
C+ +LA + C+ + + G ++L+ + L +G +L
Sbjct: 598 CNSSLASLSLVGCRAVTSLELKCPRIEQICLDGCDHLETAFFQPVALRS--LNLGICPKL 655
Query: 256 KILNFRL----------CRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCR 305
+LN C +S+ S++ CPLL + + C+++R A C
Sbjct: 656 SVLNIEAPYMVSLELKGCGVLSEASIM-----CPLLTSLDASFCSQLRDDCLSATTASCP 710
Query: 306 NLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLS 339
++ L + C ++ GL +L +G +LT+L LS
Sbjct: 711 LIESLVLMSCPSIGSDGLSSL-NGLPNLTVLDLS 743
>AT5G07670.1 | Symbols: | RNI-like superfamily protein |
chr5:2430421-2432065 FORWARD LENGTH=476
Length = 476
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 108/265 (40%), Gaps = 30/265 (11%)
Query: 88 ELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRCLGVTDKGLE 147
EL + GL L SNL+KL + ++ GL VA C L + L++C G+
Sbjct: 171 ELVERGLKALAGGCSNLRKLVVT---NTSELGLLNVAEECSRLQELELHKCSDSVLLGIG 227
Query: 148 TLASACLSLKCVNIS--YCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGFGGCSKTL 205
+ + N+ Y + +SD GL L + C++L + + C+ GF G +
Sbjct: 228 AFENLQILRLVGNVDGLYNSLVSDIGLMILAQGCKRLVKLELVGCEG----GFDGIKEIG 283
Query: 206 ACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRT 265
C C++ E V ME W L G+ + LK L C+
Sbjct: 284 EC-----CQMLEELT---VCDNKMES------GW------LGGLRYCENLKTLKLVSCKK 323
Query: 266 VSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLA 325
+ + +++ CP LE L C + +A+ C + + C L D + +
Sbjct: 324 IDNDPDESLSCCCPALERLQLEKCQLRDKNTVKALFKMCEAAREIVFQDCWGL-DNDIFS 382
Query: 326 LQDGCRSLTILYLSGCSRLTSIALE 350
L + +LYL GCS LT+ LE
Sbjct: 383 LAMAFGRVKLLYLEGCSLLTTSGLE 407
>AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 |
chr4:4197847-4199511 REVERSE LENGTH=554
Length = 554
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 157/417 (37%), Gaps = 83/417 (19%)
Query: 2 HLPDDCLTIIFHALDSRTDRESFGLTCRRWLHIQDFNRRSLQFECSFTVLTRTSLSGKSF 61
+LPD+CL++IF +L D + L CRRWL I+ R L + +++ F
Sbjct: 76 NLPDECLSLIFQSLTC-ADLKRCSLVCRRWLTIEGQCRHRLSLKAQSDLISVIPSLFTRF 134
Query: 62 DIXXXXXXXXXXXXXXXESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLS 121
D SL +C D+ + NL +L L C +++D G+
Sbjct: 135 D-----SVTKLVLRSDRRSLGIC------DNAFVMISVRCRNLTRLKLRGCPEISDLGII 183
Query: 122 LVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQI-------------- 167
C SL +S C G KG+ L + CL L+ +++ I
Sbjct: 184 GFTENCRSLKKVSFGSC-GFGVKGMNALLNTCLGLEELSVKRLRGIGAGAELIGPGGAAG 242
Query: 168 -----------SDKGLKTLTEHCRQLQAVNISHCDSITGIGFGGC-SKTLACVEA--ESC 213
+ + L + L+ + I C F K A VE E
Sbjct: 243 SLKVICLKELHNGQCFAPLLSGAKGLRILKIFRCSGDWDRVFEAVRDKVNAIVEIHLERI 302
Query: 214 KLTPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFS---------SRLKILNFRLCR 264
+++ G+ + G+E L + V + +G + +L I ++ R
Sbjct: 303 QMSDLGLTALSKCSGVEVLHL------VKTPDCTNVGLALVAERCKLLRKLHIDGWKTNR 356
Query: 265 TVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHV------------ 312
+ D ++ +AK C L+E L N ++S +A+ C NL+RL +
Sbjct: 357 -IGDEGLIVVAKYCWNLQELVLIGVNPTKLS-LEAIVSNCLNLERLALCGSDTVGDTELC 414
Query: 313 ---NRCHNL----------SDGGLLALQDGCRSLTILYLSGCSRLTSIALELFKSHR 356
+C L +D G+ AL +GC +L + + C +T+ +L + R
Sbjct: 415 CIAEKCLALRKLCIKNCPITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLRKRR 471
>AT5G51380.1 | Symbols: | RNI-like superfamily protein |
chr5:20875945-20877779 FORWARD LENGTH=479
Length = 479
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 141/364 (38%), Gaps = 67/364 (18%)
Query: 19 TDRESFGLTCRRWLHIQDFNRRSLQ-FECSFTV----------LTRTSLSGKSFDIXXXX 67
+ E L C+RWL +Q RS++ F+ F + LT L F+
Sbjct: 82 SQNEDVSLVCKRWLSVQGRRLRSMKVFDWEFLLSGRLVSRFPKLTSVDLVNACFNPSSNS 141
Query: 68 -----XXXXXXXXXXXESLSLCGCRE------LSDSGLTRLLTYGS-NLQKLYLDCCFKV 115
SL+L E + D GL R+L GS +L KL +
Sbjct: 142 GILLCHTSISFHVSTDSSLNLNFVEESLLDNEMVDKGL-RVLGRGSFDLIKLVV---INA 197
Query: 116 TDYGLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLK------CVNISYCTQISD 169
T+ GL +A C L + L++C +D L +A AC +L+ V+ Y + +SD
Sbjct: 198 TELGLLSLAEDCSDLQELELHKC---SDNLLRGIA-ACENLRGLRLVGSVDGLYSSSVSD 253
Query: 170 KGLKTLTEHCRQLQAVNISHCD-SITGI-GFGGCSKTLACVEAESCKLTPEGVMGIVSGG 227
GL L + C++L + +S C+ S GI G C + L E C +
Sbjct: 254 IGLTILAQGCKRLVKLELSGCEGSFDGIKAIGQCCEVLE--ELSICDHRMDD-------- 303
Query: 228 GMEYLDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTV-SDTSVVAIAKGCPLLEEWNL 286
W ++ + + LK L CR + S + CP LE L
Sbjct: 304 ----------GW------IAALSYFESLKTLLISSCRKIDSSPGPGKLLGSCPALESLQL 347
Query: 287 ALCNEVRISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTS 346
C G +A+ C + ++++ C L D +L R + L L GCS LT+
Sbjct: 348 RRCCLNDKEGMRALFKVCDGVTKVNIQDCWGLDDDS-FSLAKAFRRVRFLSLEGCSILTT 406
Query: 347 IALE 350
LE
Sbjct: 407 SGLE 410
>AT5G21900.1 | Symbols: | RNI-like superfamily protein |
chr5:7238239-7240338 FORWARD LENGTH=544
Length = 544
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 51/244 (20%)
Query: 103 NLQKLYLDCCFK-VTDYGLSL----VASGCPSLTTISLYRCLGVTDKGLETLASACLSLK 157
+L+ L LD C + +TDY ++ +G PSLTT+SL +TD L ++ + L+
Sbjct: 225 SLKVLILDLCGRSMTDYTINQFFKRAPNGFPSLTTLSLQGAFCLTDNALLLISKSSPLLQ 284
Query: 158 CVNISYCTQISDKGLKTLTEHC-RQLQAVNISHCDSITGIGFGGCSKTLACVEAESCKLT 216
+N++ C+ ++ + L+ L + L+ ++I C I G S +L E KL
Sbjct: 285 YINLTECSLLTYRALRILADKFGSTLRGLSIGGCQGIK--KHKGFSSSLYKFE----KLN 338
Query: 217 PEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTVSDTSVVAIAK 276
V G+VS G+ + +F + R+
Sbjct: 339 YLSVAGLVSVN-------------------DGV-------VRSFFMFRS----------- 361
Query: 277 GCPLLEEWNLALCNEVRISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLALQDGCRSLTIL 336
+L + +LA CNEV +G YC+ L+ L + L+D L + +GCR L L
Sbjct: 362 --SILTDLSLANCNEVTDECMWHIGRYCKKLEALDITDLDKLTDKSLEFITEGCRYLKSL 419
Query: 337 YLSG 340
L+
Sbjct: 420 KLTS 423
>AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 |
chr5:23449916-23450915 REVERSE LENGTH=300
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 116 TDYGLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTL 175
+D+ LS A CP+L +++ VTD + +A C SLK ++ISYC +IS L +
Sbjct: 100 SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMI 159
Query: 176 TEHC-------RQLQAVNISHCDSITGIGFGGCSK--------------TLACVEAESCK 214
+C R L + H S+ C + L +E + +
Sbjct: 160 GRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSR 219
Query: 215 LTPEGVMGIVSG-GGMEYLDV 234
L+ +G+ I G +EYLD+
Sbjct: 220 LSVKGLASICEGCPKLEYLDL 240
>AT5G51370.2 | Symbols: | RNI-like superfamily protein |
chr5:20872783-20874192 FORWARD LENGTH=446
Length = 446
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 98/247 (39%), Gaps = 40/247 (16%)
Query: 113 FKVTDYGLSLVASGCPSLTTISLYRCLGVTDKGLETLASACLSLK------CVNISYCTQ 166
++ GL +A C L + L++C D L +A AC +LK V+ Y +
Sbjct: 159 INASELGLLSLAGDCSDLQELELHKC---NDNLLHGIA-ACKNLKGLRLVGSVDGLYSSS 214
Query: 167 ISDKGLKTLTEHCRQLQAVNISHCD-SITGI-GFGGCSKTLACVEAESCKLTPEGVMGIV 224
+SD GL L + CR L + +S C+ S GI G C + L E C +
Sbjct: 215 VSDIGLTFLAQGCRSLVKLELSGCEGSFDGIKAIGQCCEVLE--ELSICDHRMDD----- 267
Query: 225 SGGGMEYLDVSCLSWSVLGDPLSGIGFSSRLKILNFRLCRTV-SDTSVVAIAKGCPLLEE 283
W ++ + + LKIL CR + + + + CP +E
Sbjct: 268 -------------GW------IAALSYFESLKILRISSCRKIDASPGPEKLLRSCPAMES 308
Query: 284 WNLALCNEVRISGWQAVGLYCRNLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLSGCSR 343
L C G +A+ C +++ C LSD +L R + L L GCS
Sbjct: 309 LQLKRCCLNDKEGIKALFKVCDGATEVNIQDCWGLSDD-CFSLAKAFRRVRFLSLEGCSV 367
Query: 344 LTSIALE 350
LTS LE
Sbjct: 368 LTSGGLE 374
>AT1G55590.1 | Symbols: | RNI-like superfamily protein |
chr1:20769476-20771756 REVERSE LENGTH=607
Length = 607
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 29/253 (11%)
Query: 79 ESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRC 138
ES+ L G ++SD+G LL NL+K + F ++D V SL + L C
Sbjct: 314 ESVRLGGFPKVSDAGFASLLHSCRNLKKFEVRGAFLLSDLAFHDVTGSSCSLQEVRLSTC 373
Query: 139 LGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSITGIGF 198
+T + ++ L C +L+ +++ C ISD L +++ R+L ++N++ D +T G
Sbjct: 374 PLITSEAVKKLG-LCGNLEVLDLGSCKSISDSCLNSVSA-LRKLTSLNLAGAD-VTDSGM 430
Query: 199 GGCSKTLACVEAESCKLTPEGVMGIVSGGGMEYLDVSCLSWSVLGDPLSGIG-FSSRLKI 257
K+ + +L+ G VS G+ YL L+ G S L
Sbjct: 431 LALGKS----DVPITQLSLRGCRR-VSDRGISYL-------------LNNEGTISKTLST 472
Query: 258 LNFRLCRTVSDTSVVAIAKGCPLLEEWNLALCNEVRISGWQAVGLYCR-------NLKRL 310
L+ +SD ++ I C L E ++ C V S +++ + R L++L
Sbjct: 473 LDLGHMPGISDRAIHTITHCCKALTELSIRSCFHVTDSSIESLATWERQAEGGSKQLRKL 532
Query: 311 HVNRCHNLSDGGL 323
+V+ C +L+ G L
Sbjct: 533 NVHNCVSLTTGAL 545
>AT2G17020.1 | Symbols: | F-box/RNI-like superfamily protein |
chr2:7396559-7398787 REVERSE LENGTH=656
Length = 656
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 79 ESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCFKVTDYGLSLVASGCPSLTTISLYRC 138
E++ L G ++D+G +L ++L K + K+TD + + SL+ +SL RC
Sbjct: 329 ETICLGGFCRVTDAGFKTILHSCASLSKFSIYHGPKLTDLVFHDILATTLSLSHVSLRRC 388
Query: 139 LGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCD-SITGIG 197
+TD ++ LAS+ L L+ +++ C + D+ L T H +L+ + + D S TG+
Sbjct: 389 HLLTDHAIQKLASS-LKLENLDLRGCRNLRDETL-TAVSHLPKLKVLLLDGADISDTGLS 446
Query: 198 F--GGCSKTLACVEAESCKLTPEGVMGIVSGG----GMEYLDVSCLSWSVLGDPLSGIGF 251
+ G +L + C+ + M + G + LD+S L +
Sbjct: 447 YLKEGVLDSLVSLSVRGCRNLTDKFMSTLFDGSSKLALRELDLSNLPNLTDAAIFALAKS 506
Query: 252 SSRLKILNFRLCRTVSDTSVVAIA 275
+ + L R CR + D SV+A+A
Sbjct: 507 GAPITKLQLRECRLIGDASVMALA 530
>AT5G67140.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:26794009-26795213 REVERSE LENGTH=228
Length = 228
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 79 ESLSLCGCRELSDSGLTRLLTYGSNLQKLYLDCCF---KVTDYGLSLVASG--CPSLTTI 133
E+LS G + + D +RL+ NL++L + +TD GL +AS +L ++
Sbjct: 50 ETLSFAGWK-MDDDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSV 108
Query: 134 SLYRCLGVTDKGLETLASACLSLKCVNISYCTQISDKGLKTLTEHCRQLQAVNISHCDSI 193
SL+ +TD G+ L S SL+ +NI T I+D+ L + E C QL+ + + C +
Sbjct: 109 SLWGMTAITDSGVVQLISRTSSLQHLNIG-GTFITDESLFAIAERCHQLKTIGMWCCRHV 167
Query: 194 TGIGF 198
T G
Sbjct: 168 TERGL 172