Miyakogusa Predicted Gene

Lj3g3v2385390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2385390.1 Non Chatacterized Hit- tr|A9NM38|A9NM38_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,35.78,0.00000000009,DnaJ,Heat shock protein DnaJ, N-terminal;
seg,NULL; Chaperone J-domain,Heat shock protein DnaJ,
N-te,CUFF.43942.1
         (161 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G13830.2 | Symbols: J20 | DNAJ-like 20 | chr4:8011518-8012577...    49   1e-06

>AT4G13830.2 | Symbols: J20 | DNAJ-like 20 | chr4:8011518-8012577
           FORWARD LENGTH=197
          Length = 197

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 13/90 (14%)

Query: 55  YKVLSLKPGNHPDVCHDPSMKEESTRMFVQLNAAYKTLSNPLLREQYDSEINLGF----- 109
           YK L+ K   HPDV   P   EE T  F+++  AY+TLS+P  R  YD ++++GF     
Sbjct: 86  YKQLARK--YHPDVS-PPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFS 142

Query: 110 -----RSEMKVCDDDEGLRSRWQEQVVELK 134
                R + +V ++    +++WQ Q+  L+
Sbjct: 143 GRRQNRYDQEVVEEKSEWKAKWQTQLSGLR 172