Miyakogusa Predicted Gene

Lj3g3v2330790.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2330790.2 tr|D7UPI5|D7UPI5_LOTJA BHLH transcription factor
LjTAN1 OS=Lotus japonicus GN=LjTAN1 PE=2 SV=1,96.81,0,SUBFAMILY NOT
NAMED,NULL; MYC,NULL; seg,NULL,CUFF.43918.2
         (408 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH...   152   5e-37
AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH...   149   4e-36
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL...   135   4e-32
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-...   125   5e-29
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he...   125   5e-29
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he...   125   5e-29
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL...    79   5e-15
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel...    53   3e-07
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel...    53   3e-07
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel...    53   3e-07

>AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:217106-219684
           REVERSE LENGTH=526
          Length = 526

 Score =  152 bits (383), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/333 (35%), Positives = 176/333 (52%), Gaps = 59/333 (17%)

Query: 104 QDCDDNSK--------SSSLDIG-ADEVLYYTRTLCAVLGNSSSFA-----------QNL 143
           QD DD  K           L +G +DE L+Y RT+  VL  S+  +            N+
Sbjct: 224 QDNDDEKKMEIKISEEKHQLPLGISDEDLHYKRTISTVLNYSADRSGKNDKNIRHRQPNI 283

Query: 144 CASK--SSFVKWNK------GGVSERKWPRLQQMMLKKTLFDVPFMHLSCSSLKLQKENG 195
             S+  SSF++W +      G V ++K     Q +L+K L DVP MH   +      +N 
Sbjct: 284 VTSEPGSSFLRWKQCEQQVSGFVQKKK----SQNVLRKILHDVPLMH---TKRMFPSQN- 335

Query: 196 RKEWTSKLENADNFMGNVFSDKKRESRNIQVLKSVAPSACEVEKISVLGDTIQYLKKLEA 255
                S L   D       SD+++E+    VL+++ P+  EV+K S+L +TI+YL++LEA
Sbjct: 336 -----SGLNQDDP------SDRRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEA 384

Query: 256 RVEELESYMDTTATGARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDT 315
           RVEELES M +     R R+      E ++DS       + ++++  N   +  IDD   
Sbjct: 385 RVEELESCMGSVNFVERQRK----TTENLNDS-------VLIEETSGNYDDSTKIDDNSG 433

Query: 316 GLDMIVSEEDKPLDVKVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTAD 375
             + +    DK   ++V +KE EV+IE++C YR+YI+ DIM+ +SNLH+DA +V S T +
Sbjct: 434 ETEQVTVFRDKT-HLRVKLKETEVVIEVRCSYRDYIVADIMETLSNLHMDAFSVRSHTLN 492

Query: 376 GVLTFKLKSKFRGAATAPVRMIKEALWKVSGKI 408
             LT  LK+KFRGAA A V MIK  L +V G +
Sbjct: 493 KFLTLNLKAKFRGAAVASVGMIKRELRRVIGDL 525


>AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:216866-219684
           REVERSE LENGTH=580
          Length = 580

 Score =  149 bits (376), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/329 (35%), Positives = 174/329 (52%), Gaps = 59/329 (17%)

Query: 104 QDCDDNSK--------SSSLDIG-ADEVLYYTRTLCAVLGNSSSFA-----------QNL 143
           QD DD  K           L +G +DE L+Y RT+  VL  S+  +            N+
Sbjct: 224 QDNDDEKKMEIKISEEKHQLPLGISDEDLHYKRTISTVLNYSADRSGKNDKNIRHRQPNI 283

Query: 144 CASK--SSFVKWNK------GGVSERKWPRLQQMMLKKTLFDVPFMHLSCSSLKLQKENG 195
             S+  SSF++W +      G V ++K     Q +L+K L DVP MH   +      +N 
Sbjct: 284 VTSEPGSSFLRWKQCEQQVSGFVQKKK----SQNVLRKILHDVPLMH---TKRMFPSQN- 335

Query: 196 RKEWTSKLENADNFMGNVFSDKKRESRNIQVLKSVAPSACEVEKISVLGDTIQYLKKLEA 255
                S L   D       SD+++E+    VL+++ P+  EV+K S+L +TI+YL++LEA
Sbjct: 336 -----SGLNQDDP------SDRRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEA 384

Query: 256 RVEELESYMDTTATGARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDT 315
           RVEELES M +     R R+      E ++DS       + ++++  N   +  IDD   
Sbjct: 385 RVEELESCMGSVNFVERQRK----TTENLNDS-------VLIEETSGNYDDSTKIDDNSG 433

Query: 316 GLDMIVSEEDKPLDVKVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTAD 375
             + +    DK   ++V +KE EV+IE++C YR+YI+ DIM+ +SNLH+DA +V S T +
Sbjct: 434 ETEQVTVFRDKT-HLRVKLKETEVVIEVRCSYRDYIVADIMETLSNLHMDAFSVRSHTLN 492

Query: 376 GVLTFKLKSKFRGAATAPVRMIKEALWKV 404
             LT  LK+KFRGAA A V MIK  L +V
Sbjct: 493 KFLTLNLKAKFRGAAVASVGMIKRELRRV 521


>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr5:16529457-16532866
           FORWARD LENGTH=637
          Length = 637

 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 161/322 (50%), Gaps = 42/322 (13%)

Query: 102 ELQDCDDNSKSSSLDIGADEVLYYTRTLCAVLGNSSSFAQNL----CASKSSFVKWNKG- 156
           ++Q+   N K+ S D   D+V +Y   +  +   +           C  +SSF +W K  
Sbjct: 337 QIQEQQRNVKTLSFDPRNDDV-HYQSVISTIFKTNHQLILGPQFRNCDKQSSFTRWKKSS 395

Query: 157 ----GVSERKWPRLQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENADNFMGN 212
               G +    P   Q MLKK +FDVP +H     L L     R E            GN
Sbjct: 396 SSSSGTATVTAP--SQGMLKKIIFDVPRVHQK-EKLMLDSPEARDE-----------TGN 441

Query: 213 --VFSDKKRESRN--IQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTA 268
             V   K+RE  N     L+ + PS  +++K+S+L DTI+YL++LE RV+ELES  ++T 
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTD 501

Query: 269 TGAR-----TRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSE 323
           T  R      R+K  D  E+ S +   +    G K S  N  +A   +  DTG   +   
Sbjct: 502 TETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVGEA---EPADTGFTGLTD- 557

Query: 324 EDKPLDVKVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADGVLTFKLK 383
                ++++     EV+IE++C +RE +L +IMD IS+LH+D+H+V SST DG+L   + 
Sbjct: 558 -----NLRIGSFGNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDGLLCLTVN 612

Query: 384 SKFRGAATAPVRMIKEALWKVS 405
            K +G+  A   MIKEAL +V+
Sbjct: 613 CKHKGSKIATPGMIKEALQRVA 634


>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr1:23599809-23602734
           FORWARD LENGTH=596
          Length = 596

 Score =  125 bits (314), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 143/275 (52%), Gaps = 53/275 (19%)

Query: 147 KSSFVKWNKGGVSERKWPRLQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENA 206
           +SSF +W +   S +      Q M+KK LF+VP M            N ++E    L + 
Sbjct: 356 RSSFTRWKRSS-SVKTLGEKSQKMIKKILFEVPLM------------NKKEEL---LPDT 399

Query: 207 DNFMGN-VFSDKKRESR---NIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELES 262
               GN   S+KKR  +       L+S+ PS  +++K+S+L DTI+YL+ L+ RV+ELES
Sbjct: 400 PEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459

Query: 263 YMDTTATGART---RRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDM 319
             ++  T  R    +RK PD +E+ + +               +KRK  D++        
Sbjct: 460 CRESADTETRITMMKRKKPDDEEERASA-----------NCMNSKRKGSDVN-------- 500

Query: 320 IVSEEDKPLDV---------KVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVD 370
               ED+P D+         +++    EV+IE++C +RE IL +IMD IS+L++D+H+V 
Sbjct: 501 --VGEDEPADIGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQ 558

Query: 371 SSTADGVLTFKLKSKFRGAATAPVRMIKEALWKVS 405
           SST DG+L   +  K +G   A   MI+EAL +V+
Sbjct: 559 SSTGDGLLCLTVNCKHKGTKIATTGMIQEALQRVA 593


>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr1:23599809-23602734 FORWARD LENGTH=596
          Length = 596

 Score =  125 bits (314), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 143/275 (52%), Gaps = 53/275 (19%)

Query: 147 KSSFVKWNKGGVSERKWPRLQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENA 206
           +SSF +W +   S +      Q M+KK LF+VP M            N ++E    L + 
Sbjct: 356 RSSFTRWKRSS-SVKTLGEKSQKMIKKILFEVPLM------------NKKEEL---LPDT 399

Query: 207 DNFMGN-VFSDKKRESR---NIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELES 262
               GN   S+KKR  +       L+S+ PS  +++K+S+L DTI+YL+ L+ RV+ELES
Sbjct: 400 PEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459

Query: 263 YMDTTATGART---RRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDM 319
             ++  T  R    +RK PD +E+ + +               +KRK  D++        
Sbjct: 460 CRESADTETRITMMKRKKPDDEEERASA-----------NCMNSKRKGSDVN-------- 500

Query: 320 IVSEEDKPLDV---------KVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVD 370
               ED+P D+         +++    EV+IE++C +RE IL +IMD IS+L++D+H+V 
Sbjct: 501 --VGEDEPADIGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQ 558

Query: 371 SSTADGVLTFKLKSKFRGAATAPVRMIKEALWKVS 405
           SST DG+L   +  K +G   A   MI+EAL +V+
Sbjct: 559 SSTGDGLLCLTVNCKHKGTKIATTGMIQEALQRVA 593


>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr1:23599809-23602734 FORWARD LENGTH=596
          Length = 596

 Score =  125 bits (314), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 143/275 (52%), Gaps = 53/275 (19%)

Query: 147 KSSFVKWNKGGVSERKWPRLQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENA 206
           +SSF +W +   S +      Q M+KK LF+VP M            N ++E    L + 
Sbjct: 356 RSSFTRWKRSS-SVKTLGEKSQKMIKKILFEVPLM------------NKKEEL---LPDT 399

Query: 207 DNFMGN-VFSDKKRESR---NIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELES 262
               GN   S+KKR  +       L+S+ PS  +++K+S+L DTI+YL+ L+ RV+ELES
Sbjct: 400 PEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459

Query: 263 YMDTTATGART---RRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDM 319
             ++  T  R    +RK PD +E+ + +               +KRK  D++        
Sbjct: 460 CRESADTETRITMMKRKKPDDEEERASA-----------NCMNSKRKGSDVN-------- 500

Query: 320 IVSEEDKPLDV---------KVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVD 370
               ED+P D+         +++    EV+IE++C +RE IL +IMD IS+L++D+H+V 
Sbjct: 501 --VGEDEPADIGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQ 558

Query: 371 SSTADGVLTFKLKSKFRGAATAPVRMIKEALWKVS 405
           SST DG+L   +  K +G   A   MI+EAL +V+
Sbjct: 559 SSTGDGLLCLTVNCKHKGTKIATTGMIQEALQRVA 593


>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:6182067-6186261
           FORWARD LENGTH=518
          Length = 518

 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 131/291 (45%), Gaps = 74/291 (25%)

Query: 125 YTRTLCAVLGN--SSSFAQNLCAS---KSSFVKWNKGGVSERKWPRL---QQMMLKKTLF 176
           Y++T+  +L +  +S  + ++  S   +SSF  W      E +  +     Q +LK+ +F
Sbjct: 284 YSQTVTTLLMSHPTSLLSDSVSTSSYIQSSFATWRVENGKEHQQVKTAPSSQWVLKQMIF 343

Query: 177 DVPFMHLSCSSLKLQKENGRKEWTSKLENADNFMGNVFSDKKRESR---NIQVLKSVAPS 233
            VPF+H +    +L +E+               + +V ++++R  +       L+S+ P 
Sbjct: 344 RVPFLHDNTKDKRLPRED---------------LSHVVAERRRREKLNEKFITLRSMVPF 388

Query: 234 ACEVEKISVLGDTIQYLKKLEARVEELESYMDTTATGARTRRKCPDVQEQISDSYGPSNI 293
             +++K+S+LGDTI Y+  L  RV ELE+                   EQ          
Sbjct: 389 VTKMDKVSILGDTIAYVNHLRKRVHELENTH----------------HEQ---------- 422

Query: 294 YMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPLDVKVNMKEEEVLIEMKCPYREYILY 353
               K++R  KRK  +                   +V+V++ E +VL+EM+C YR+ +L 
Sbjct: 423 --QHKRTRTCKRKTSE-------------------EVEVSIIENDVLLEMRCEYRDGLLL 461

Query: 354 DIMDAISNLHIDAHTVDSSTADGVLTFKLKSKFRGAATAPVRMIKEALWKV 404
           DI+  +  L I+   V +S  D     ++++K RG   A +  +K A+ +V
Sbjct: 462 DILQVLHELGIETTAVHTSVNDHDFEAEIRAKVRGKK-ASIAEVKRAIHQV 511


>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr3:9832953-9834790 REVERSE LENGTH=494
          Length = 494

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 25/201 (12%)

Query: 212 NVFSDKKRESR---NIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTA 268
           N+ ++++R  +    + +L+SV P   ++++ S+LGD I YLK+L  R+ +L + +++T 
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367

Query: 269 TGARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPL 328
            G+             S S+ P          R+ K + C           + S + +  
Sbjct: 368 PGSLP---------PTSSSFHPLTPTPQTLSCRV-KEELCP--------SSLPSPKGQQA 409

Query: 329 DVKVNMKE-EEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADGVL--TFKLKSK 385
            V+V ++E   V I M C  R  +L   M A+ NL +D      S  +G     F+ +  
Sbjct: 410 RVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQC 469

Query: 386 FRGAATAPVRMIKEALWKVSG 406
             G    P + IK  L+  +G
Sbjct: 470 QEGQEILPDQ-IKAVLFDTAG 489


>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr3:9832953-9834790 REVERSE LENGTH=494
          Length = 494

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 25/201 (12%)

Query: 212 NVFSDKKRESR---NIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTA 268
           N+ ++++R  +    + +L+SV P   ++++ S+LGD I YLK+L  R+ +L + +++T 
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367

Query: 269 TGARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPL 328
            G+             S S+ P          R+ K + C           + S + +  
Sbjct: 368 PGSLP---------PTSSSFHPLTPTPQTLSCRV-KEELCP--------SSLPSPKGQQA 409

Query: 329 DVKVNMKE-EEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADGVL--TFKLKSK 385
            V+V ++E   V I M C  R  +L   M A+ NL +D      S  +G     F+ +  
Sbjct: 410 RVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQC 469

Query: 386 FRGAATAPVRMIKEALWKVSG 406
             G    P + IK  L+  +G
Sbjct: 470 QEGQEILPDQ-IKAVLFDTAG 489


>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr3:9832953-9834790 REVERSE LENGTH=494
          Length = 494

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 25/201 (12%)

Query: 212 NVFSDKKRESR---NIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTA 268
           N+ ++++R  +    + +L+SV P   ++++ S+LGD I YLK+L  R+ +L + +++T 
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367

Query: 269 TGARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPL 328
            G+             S S+ P          R+ K + C           + S + +  
Sbjct: 368 PGSLP---------PTSSSFHPLTPTPQTLSCRV-KEELCP--------SSLPSPKGQQA 409

Query: 329 DVKVNMKE-EEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADGVL--TFKLKSK 385
            V+V ++E   V I M C  R  +L   M A+ NL +D      S  +G     F+ +  
Sbjct: 410 RVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQC 469

Query: 386 FRGAATAPVRMIKEALWKVSG 406
             G    P + IK  L+  +G
Sbjct: 470 QEGQEILPDQ-IKAVLFDTAG 489