Miyakogusa Predicted Gene

Lj3g3v2330790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2330790.1 tr|D7UPI5|D7UPI5_LOTJA BHLH transcription factor
LjTAN1 OS=Lotus japonicus GN=LjTAN1 PE=2 SV=1,99.5,0,SUBFAMILY NOT
NAMED,NULL; MYC,NULL; seg,NULL,CUFF.43918.1
         (397 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH...   134   1e-31
AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH...   132   6e-31
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL...   124   1e-28
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-...   112   4e-25
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he...   112   4e-25
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he...   112   4e-25
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL...    68   1e-11

>AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:217106-219684
           REVERSE LENGTH=526
          Length = 526

 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 165/328 (50%), Gaps = 60/328 (18%)

Query: 104 QDCDDNSK--------SSSLDIG-ADEVLYYTRTLCAVLGNSSSFA-----------QNL 143
           QD DD  K           L +G +DE L+Y RT+  VL  S+  +            N+
Sbjct: 224 QDNDDEKKMEIKISEEKHQLPLGISDEDLHYKRTISTVLNYSADRSGKNDKNIRHRQPNI 283

Query: 144 CASK--SSFVKWNK------GGVSERKWPRLQQMMLKKTLFDVPFMHL------SCSSLK 189
             S+  SSF++W +      G V ++K     Q +L+K L DVP MH         S L 
Sbjct: 284 VTSEPGSSFLRWKQCEQQVSGFVQKKK----SQNVLRKILHDVPLMHTKRMFPSQNSGLN 339

Query: 190 LQKENGRKEWTSKLENADNFMGNVFSDKKRESRNIQVEKISVLGDTIQYLKKLEARVEEL 249
               + R++   K       +  V           +V+K S+L +TI+YL++LEARVEEL
Sbjct: 340 QDDPSDRRKENEKFSVLRTMVPTVN----------EVDKESILNNTIKYLQELEARVEEL 389

Query: 250 ESYMDTTATGARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMI 309
           ES M +     R R+      E ++DS       + ++++  N   +  IDD     + +
Sbjct: 390 ESCMGSVNFVERQRK----TTENLNDS-------VLIEETSGNYDDSTKIDDNSGETEQV 438

Query: 310 VSEEDKPLDVKVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADGVLTF 369
               DK   ++V +KE EV+IE++C YR+YI+ DIM+ +SNLH+DA +V S T +  LT 
Sbjct: 439 TVFRDKT-HLRVKLKETEVVIEVRCSYRDYIVADIMETLSNLHMDAFSVRSHTLNKFLTL 497

Query: 370 KLKSKFRGAATAPVRMIKEALWKVSGKI 397
            LK+KFRGAA A V MIK  L +V G +
Sbjct: 498 NLKAKFRGAAVASVGMIKRELRRVIGDL 525


>AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:216866-219684
           REVERSE LENGTH=580
          Length = 580

 Score =  132 bits (331), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 110/324 (33%), Positives = 163/324 (50%), Gaps = 60/324 (18%)

Query: 104 QDCDDNSK--------SSSLDIG-ADEVLYYTRTLCAVLGNSSSFA-----------QNL 143
           QD DD  K           L +G +DE L+Y RT+  VL  S+  +            N+
Sbjct: 224 QDNDDEKKMEIKISEEKHQLPLGISDEDLHYKRTISTVLNYSADRSGKNDKNIRHRQPNI 283

Query: 144 CASK--SSFVKWNK------GGVSERKWPRLQQMMLKKTLFDVPFMHL------SCSSLK 189
             S+  SSF++W +      G V ++K     Q +L+K L DVP MH         S L 
Sbjct: 284 VTSEPGSSFLRWKQCEQQVSGFVQKKK----SQNVLRKILHDVPLMHTKRMFPSQNSGLN 339

Query: 190 LQKENGRKEWTSKLENADNFMGNVFSDKKRESRNIQVEKISVLGDTIQYLKKLEARVEEL 249
               + R++   K       +  V           +V+K S+L +TI+YL++LEARVEEL
Sbjct: 340 QDDPSDRRKENEKFSVLRTMVPTVN----------EVDKESILNNTIKYLQELEARVEEL 389

Query: 250 ESYMDTTATGARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMI 309
           ES M +     R R+      E ++DS       + ++++  N   +  IDD     + +
Sbjct: 390 ESCMGSVNFVERQRK----TTENLNDS-------VLIEETSGNYDDSTKIDDNSGETEQV 438

Query: 310 VSEEDKPLDVKVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADGVLTF 369
               DK   ++V +KE EV+IE++C YR+YI+ DIM+ +SNLH+DA +V S T +  LT 
Sbjct: 439 TVFRDKT-HLRVKLKETEVVIEVRCSYRDYIVADIMETLSNLHMDAFSVRSHTLNKFLTL 497

Query: 370 KLKSKFRGAATAPVRMIKEALWKV 393
            LK+KFRGAA A V MIK  L +V
Sbjct: 498 NLKAKFRGAAVASVGMIKRELRRV 521


>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr5:16529457-16532866
           FORWARD LENGTH=637
          Length = 637

 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 156/322 (48%), Gaps = 53/322 (16%)

Query: 102 ELQDCDDNSKSSSLDIGADEVLYYTRTLCAVLGNSSSFAQNL----CASKSSFVKWNKG- 156
           ++Q+   N K+ S D   D+V +Y   +  +   +           C  +SSF +W K  
Sbjct: 337 QIQEQQRNVKTLSFDPRNDDV-HYQSVISTIFKTNHQLILGPQFRNCDKQSSFTRWKKSS 395

Query: 157 ----GVSERKWPRLQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENADNFMGN 212
               G +    P   Q MLKK +FDVP +H     L L     R E            GN
Sbjct: 396 SSSSGTATVTAP--SQGMLKKIIFDVPRVHQK-EKLMLDSPEARDE-----------TGN 441

Query: 213 --VFSDKKRESRN-------------IQVEKISVLGDTIQYLKKLEARVEELESYMDTTA 257
             V   K+RE  N              +++K+S+L DTI+YL++LE RV+ELES  ++T 
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTD 501

Query: 258 TGAR-----TRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSE 312
           T  R      R+K  D  E+ S +   +    G K S  N  +A   +  DTG   +   
Sbjct: 502 TETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVGEA---EPADTGFTGLTD- 557

Query: 313 EDKPLDVKVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADGVLTFKLK 372
                ++++     EV+IE++C +RE +L +IMD IS+LH+D+H+V SST DG+L   + 
Sbjct: 558 -----NLRIGSFGNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDGLLCLTVN 612

Query: 373 SKFRGAATAPVRMIKEALWKVS 394
            K +G+  A   MIKEAL +V+
Sbjct: 613 CKHKGSKIATPGMIKEALQRVA 634


>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr1:23599809-23602734
           FORWARD LENGTH=596
          Length = 596

 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 139/275 (50%), Gaps = 64/275 (23%)

Query: 147 KSSFVKWNKGGVSERKWPRLQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENA 206
           +SSF +W +   S +      Q M+KK LF+VP M            N ++E    L + 
Sbjct: 356 RSSFTRWKRSS-SVKTLGEKSQKMIKKILFEVPLM------------NKKEEL---LPDT 399

Query: 207 DNFMGN-VFSDKKRES---------RNI-----QVEKISVLGDTIQYLKKLEARVEELES 251
               GN   S+KKR           R+I     +++K+S+L DTI+YL+ L+ RV+ELES
Sbjct: 400 PEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459

Query: 252 YMDTTATGART---RRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDM 308
             ++  T  R    +RK PD +E+ + +               +KRK  D++        
Sbjct: 460 CRESADTETRITMMKRKKPDDEEERASA-----------NCMNSKRKGSDVN-------- 500

Query: 309 IVSEEDKPLDV---------KVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVD 359
               ED+P D+         +++    EV+IE++C +RE IL +IMD IS+L++D+H+V 
Sbjct: 501 --VGEDEPADIGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQ 558

Query: 360 SSTADGVLTFKLKSKFRGAATAPVRMIKEALWKVS 394
           SST DG+L   +  K +G   A   MI+EAL +V+
Sbjct: 559 SSTGDGLLCLTVNCKHKGTKIATTGMIQEALQRVA 593


>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr1:23599809-23602734 FORWARD LENGTH=596
          Length = 596

 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 139/275 (50%), Gaps = 64/275 (23%)

Query: 147 KSSFVKWNKGGVSERKWPRLQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENA 206
           +SSF +W +   S +      Q M+KK LF+VP M            N ++E    L + 
Sbjct: 356 RSSFTRWKRSS-SVKTLGEKSQKMIKKILFEVPLM------------NKKEEL---LPDT 399

Query: 207 DNFMGN-VFSDKKRES---------RNI-----QVEKISVLGDTIQYLKKLEARVEELES 251
               GN   S+KKR           R+I     +++K+S+L DTI+YL+ L+ RV+ELES
Sbjct: 400 PEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459

Query: 252 YMDTTATGART---RRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDM 308
             ++  T  R    +RK PD +E+ + +               +KRK  D++        
Sbjct: 460 CRESADTETRITMMKRKKPDDEEERASA-----------NCMNSKRKGSDVN-------- 500

Query: 309 IVSEEDKPLDV---------KVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVD 359
               ED+P D+         +++    EV+IE++C +RE IL +IMD IS+L++D+H+V 
Sbjct: 501 --VGEDEPADIGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQ 558

Query: 360 SSTADGVLTFKLKSKFRGAATAPVRMIKEALWKVS 394
           SST DG+L   +  K +G   A   MI+EAL +V+
Sbjct: 559 SSTGDGLLCLTVNCKHKGTKIATTGMIQEALQRVA 593


>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr1:23599809-23602734 FORWARD LENGTH=596
          Length = 596

 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 139/275 (50%), Gaps = 64/275 (23%)

Query: 147 KSSFVKWNKGGVSERKWPRLQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENA 206
           +SSF +W +   S +      Q M+KK LF+VP M            N ++E    L + 
Sbjct: 356 RSSFTRWKRSS-SVKTLGEKSQKMIKKILFEVPLM------------NKKEEL---LPDT 399

Query: 207 DNFMGN-VFSDKKRES---------RNI-----QVEKISVLGDTIQYLKKLEARVEELES 251
               GN   S+KKR           R+I     +++K+S+L DTI+YL+ L+ RV+ELES
Sbjct: 400 PEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459

Query: 252 YMDTTATGART---RRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDM 308
             ++  T  R    +RK PD +E+ + +               +KRK  D++        
Sbjct: 460 CRESADTETRITMMKRKKPDDEEERASA-----------NCMNSKRKGSDVN-------- 500

Query: 309 IVSEEDKPLDV---------KVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVD 359
               ED+P D+         +++    EV+IE++C +RE IL +IMD IS+L++D+H+V 
Sbjct: 501 --VGEDEPADIGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQ 558

Query: 360 SSTADGVLTFKLKSKFRGAATAPVRMIKEALWKVS 394
           SST DG+L   +  K +G   A   MI+EAL +V+
Sbjct: 559 SSTGDGLLCLTVNCKHKGTKIATTGMIQEALQRVA 593


>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:6182067-6186261
           FORWARD LENGTH=518
          Length = 518

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 126/291 (43%), Gaps = 85/291 (29%)

Query: 125 YTRTLCAVLGN--SSSFAQNLCAS---KSSFVKWNKGGVSERKWPRL---QQMMLKKTLF 176
           Y++T+  +L +  +S  + ++  S   +SSF  W      E +  +     Q +LK+ +F
Sbjct: 284 YSQTVTTLLMSHPTSLLSDSVSTSSYIQSSFATWRVENGKEHQQVKTAPSSQWVLKQMIF 343

Query: 177 DVPFMHLSCSSLKLQKENGRKEWTSKLENADNFMGNVFSDKKRESR-------------- 222
            VPF+H +    +L +E+               + +V ++++R  +              
Sbjct: 344 RVPFLHDNTKDKRLPRED---------------LSHVVAERRRREKLNEKFITLRSMVPF 388

Query: 223 NIQVEKISVLGDTIQYLKKLEARVEELESYMDTTATGARTRRKCPDVQEQISDSYGPSNI 282
             +++K+S+LGDTI Y+  L  RV ELE+                   EQ          
Sbjct: 389 VTKMDKVSILGDTIAYVNHLRKRVHELENTH----------------HEQ---------- 422

Query: 283 YMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPLDVKVNMKEEEVLIEMKCPYREYILY 342
               K++R  KRK  +                   +V+V++ E +VL+EM+C YR+ +L 
Sbjct: 423 --QHKRTRTCKRKTSE-------------------EVEVSIIENDVLLEMRCEYRDGLLL 461

Query: 343 DIMDAISNLHIDAHTVDSSTADGVLTFKLKSKFRGAATAPVRMIKEALWKV 393
           DI+  +  L I+   V +S  D     ++++K RG   A +  +K A+ +V
Sbjct: 462 DILQVLHELGIETTAVHTSVNDHDFEAEIRAKVRGKK-ASIAEVKRAIHQV 511