Miyakogusa Predicted Gene
- Lj3g3v2320680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2320680.1 tr|G7IG29|G7IG29_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_2g0,22.07,2e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
PPR_3,,NODE_48611_length_1577_cov_11.637286.path1.1
(493 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 587 e-168
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 587 e-168
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 248 7e-66
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 4e-65
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 4e-65
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 7e-55
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 193 3e-49
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 7e-47
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 4e-46
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 4e-46
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 2e-45
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 4e-45
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 8e-45
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 177 1e-44
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 175 5e-44
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 175 7e-44
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 174 9e-44
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 170 2e-42
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 170 2e-42
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 3e-42
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 3e-42
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 7e-42
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 8e-42
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 1e-41
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 2e-41
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 2e-40
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 2e-40
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 3e-40
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 6e-40
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 6e-40
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 6e-40
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 7e-40
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 7e-40
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 161 1e-39
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 157 2e-38
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 6e-38
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 6e-38
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 155 7e-38
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 7e-38
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 1e-37
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 6e-37
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 7e-37
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 152 7e-37
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 151 8e-37
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 3e-36
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 8e-36
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 9e-34
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 4e-33
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 7e-33
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 9e-33
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 5e-32
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 135 6e-32
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 1e-31
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 132 6e-31
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 131 9e-31
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 127 2e-29
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 9e-29
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 4e-28
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 121 1e-27
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 115 7e-26
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 115 8e-26
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 115 9e-26
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 112 7e-25
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 109 3e-24
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 109 4e-24
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 108 8e-24
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 108 1e-23
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 106 5e-23
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 105 6e-23
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 103 2e-22
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 97 2e-20
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 97 3e-20
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 97 3e-20
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 96 5e-20
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 95 1e-19
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 92 8e-19
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 90 3e-18
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 90 4e-18
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 87 2e-17
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 86 4e-17
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 86 4e-17
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 83 3e-16
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 80 2e-15
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 80 4e-15
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 80 4e-15
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 80 4e-15
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 80 5e-15
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 80 5e-15
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 79 8e-15
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 79 9e-15
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 78 1e-14
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 78 1e-14
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 77 2e-14
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 77 2e-14
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 75 7e-14
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 9e-14
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 75 1e-13
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 75 1e-13
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 75 1e-13
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 74 2e-13
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 72 8e-13
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 71 1e-12
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 70 4e-12
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 69 5e-12
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 69 6e-12
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 69 7e-12
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 69 9e-12
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 69 1e-11
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 64 4e-10
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 62 1e-09
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 60 4e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 56 6e-08
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G32230.1 | Symbols: PRORP1 | proteinaceous RNase P 1 | chr2:1... 54 2e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 54 3e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 1e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 1e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 1e-06
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 50 4e-06
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G48000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 587 bits (1512), Expect = e-168, Method: Compositional matrix adjust.
Identities = 283/476 (59%), Positives = 354/476 (74%)
Query: 2 RRNIRFSGTDLDFVNIAHSHLIHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFN 61
RRN G DLDFVN+AHSHLI S W+ L+ LS L FRVK++LLK++ D +LSLEFFN
Sbjct: 44 RRNPEPKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFN 103
Query: 62 WVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRL 121
W NP SH+L+TH+I+LHTL NRKFK+A SILR ++ +FDALL SYR
Sbjct: 104 WAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRE 163
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
CDS+P VFD++FKT+A+L K R+AT TF++MK+YGFLPT+ESCNA++SSLL R ++AL
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
FYREMRR ISPN YTLNMV+ YC+SG L + +E L+ M+ +G T VS+N LI+G+
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C KGLL ALK+K++MG + PNVVTFNTLI+GFC+ KL EA +VF EMK NVAPNT
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
VTYNTLINGYSQ G+ E R +E+M N ++ DILTYNALI GLCK KT+KAA VKE
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
LDK+NLVPN+STFSALI GQCVR N++R F++Y+SM G PNE TF ML+S FC+NED
Sbjct: 404 LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED 463
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
FDGA QVLR+M+ RS+ DS + + NGL G+ +L +L EME K+ L E F
Sbjct: 464 FDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESF 519
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 587 bits (1512), Expect = e-168, Method: Compositional matrix adjust.
Identities = 283/476 (59%), Positives = 354/476 (74%)
Query: 2 RRNIRFSGTDLDFVNIAHSHLIHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFN 61
RRN G DLDFVN+AHSHLI S W+ L+ LS L FRVK++LLK++ D +LSLEFFN
Sbjct: 44 RRNPEPKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFN 103
Query: 62 WVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRL 121
W NP SH+L+TH+I+LHTL NRKFK+A SILR ++ +FDALL SYR
Sbjct: 104 WAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRE 163
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
CDS+P VFD++FKT+A+L K R+AT TF++MK+YGFLPT+ESCNA++SSLL R ++AL
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
FYREMRR ISPN YTLNMV+ YC+SG L + +E L+ M+ +G T VS+N LI+G+
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C KGLL ALK+K++MG + PNVVTFNTLI+GFC+ KL EA +VF EMK NVAPNT
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
VTYNTLINGYSQ G+ E R +E+M N ++ DILTYNALI GLCK KT+KAA VKE
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
LDK+NLVPN+STFSALI GQCVR N++R F++Y+SM G PNE TF ML+S FC+NED
Sbjct: 404 LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED 463
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
FDGA QVLR+M+ RS+ DS + + NGL G+ +L +L EME K+ L E F
Sbjct: 464 FDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESF 519
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 248/487 (50%), Gaps = 41/487 (8%)
Query: 29 NLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSH-TLQTHSILLHTLANNR 87
LH LS + TP ++LLK +ND L L+F NW NP TL+ I LH L +
Sbjct: 38 QLHHLSANFTPEAASNLLLKSQNDQALILKFLNWA---NPHQFFTLRCKCITLHILTKFK 94
Query: 88 KFKTAHSILRRIINVNVASSSNTL-FDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDAT 146
+KTA + + + +L F +L +Y LC S+ VFD V K+Y+ L+ + A
Sbjct: 95 LYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKAL 154
Query: 147 HTFLRMKEYGFLPTLESCNAFLSSLLQLRR-AEVALAFYREMRRDCISPNVYTLNMVICA 205
+ +GF+P + S NA L + ++ +R A ++EM +SPNV+T N++I
Sbjct: 155 SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 214
Query: 206 YCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPN 265
+C +G++ AL +KM+ G P VV++N LI GYC + K+ M + PN
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 274
Query: 266 VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE 325
++++N +ING C+EG++ E V +EM + + VTYNTLI GY + GN + +
Sbjct: 275 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 326 EMGRNQVKPDILTYNALILGLCK------------------------------DGKTKK- 354
EM R+ + P ++TY +LI +CK DG ++K
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 355 ----AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFG 410
A +++E++ + P+ T++ALI G CV E A + M G SP+ ++
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 411 MLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
++S FC++ D D A++V R+M+++ + PD+ S+L G R + A +L EM
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 471 RLLPEGF 477
L P+ F
Sbjct: 515 GLPPDEF 521
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 218/450 (48%), Gaps = 32/450 (7%)
Query: 52 DDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASS---- 107
D LS+ H P L +++L T+ + R A ++ + ++ V+ +
Sbjct: 151 DKALSIVHLAQAHGFMPG--VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTY 208
Query: 108 ---------------SNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRM 152
+ TLFD + + C + + ++ + Y L K+ D M
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKM--ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 153 KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDL 212
G P L S N ++ L + R + EM R S + T N +I YCK G+
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTL 272
+AL +M GL+P+V+++ +LI C G + A++ M + PN T+ TL
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQV 332
++GF ++G ++EAYRV EM +P+ VTYN LING+ G E + + E+M +
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ 392
PD+++Y+ ++ G C+ +A + +E+ + + P+ T+S+LI G C + ++ A
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 393 IYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLS 452
+Y M +G P+E T+ LI+ +C D + A+Q+ +M+++ + PD S L NGL+
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 453 RCGRKRLALELCSEMEAKRLLPEGFGQEKI 482
+ R R EAKRLL + F +E +
Sbjct: 567 KQSRTR---------EAKRLLLKLFYEESV 587
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 173/360 (48%), Gaps = 23/360 (6%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ ++ + K Y A M +G P++ + + + S+ + A+ F +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
MR + PN T ++ + + G + A L +M D G SP+VV++NALI+G+C G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ A+ + M +SP+VV+++T+++GFC+ + EA RV EM + P+T+TY++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI G+ + + L+EEM R + PD TY ALI C +G +KA L E+ +
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYS---PNESTFGMLISVFCKNEDFD 423
++P+ T+S LI G N R + R + + Y P++ T+ LI C N +F
Sbjct: 551 VLPDVVTYSVLING---LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFK 606
Query: 424 GAV----------------QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
V QV ML ++ PD + + +G R G R A L EM
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 160/321 (49%), Gaps = 15/321 (4%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+M+ G P + + Q A REM + SP+V T N +I +C +G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
+ A+ LE MK+ GLSP VVS++ ++SG+C + AL++K M + P+ +T++
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
+LI GFC++ + EA ++ EM + P+ TY LIN Y G+ E ++L EM
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS--------------- 375
V PD++TY+ LI GL K +T++A L+ +L + VP+ T+
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV 609
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
+LI G C++ A Q++ SM + P+ + + ++I C+ D A + ++M+
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 436 SMTPDSGILSALYNGLSRCGR 456
+ + AL L + G+
Sbjct: 670 GFLLHTVTVIALVKALHKEGK 690
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 135/331 (40%), Gaps = 50/331 (15%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
S + ++A+ + K+ DA MKE G P + S + LS + + AL
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
REM I P+ T + +I +C+ A + E+M +GL P ++ ALI+ YC +
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLING----------------------------- 275
G L AL++ + M V P+VVT++ LING
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 276 ---------------------FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
FC +G + EA +VF M N P+ YN +I+G+ +
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G+ L++EM ++ +T AL+ L K+GK + +++ + + + A
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA 713
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
L+ N + + M G+ PN
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/453 (31%), Positives = 231/453 (50%), Gaps = 13/453 (2%)
Query: 31 HPLSTSLTPFRVK-------HILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTL 83
PL SL P+ K +L+K+K D L L+FF+W + S+ L++ I++H
Sbjct: 72 EPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSN--LESLCIVIHLA 129
Query: 84 ANNRKFKTAHSILRRIIN---VNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLN 140
++ K A S++ +NV S FD L+ +Y+ S P VFD F+ +
Sbjct: 130 VASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFG 189
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ-LRRAEVALAFYREMRRDCISPNVYTL 199
LR+A F +M YG + +++SCN +L+ L + + A+ +RE + NV +
Sbjct: 190 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASY 249
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
N+VI C+ G + A L M+ G +P V+S++ +++GYC G L K+ +M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
+ PN + ++I C+ KL EA FSEM + P+TV Y TLI+G+ + G+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
+ F EM + PD+LTY A+I G C+ G +A L E+ L P++ TF+ LI
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
G C + + AF+++ M G SPN T+ LI CK D D A ++L +M + P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 440 DSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
+ +++ NGL + G A++L E EA L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 189/415 (45%), Gaps = 17/415 (4%)
Query: 73 LQTHSILLHTLANNRKFKTAHSIL---------RRIINVNVASSSNTLFDALLCSYRLCD 123
+ +++I++H + + K AH +L +I+ + + F L ++L +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 124 --------SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLR 175
+ ++ ++ + KL +A F M G LP + +
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
A F+ EM I+P+V T +I +C+ GD+ A + +M GL P V+F
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
LI+GYC G + A ++ + M SPNVVT+ TLI+G CKEG L A + EM
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
+ PN TYN+++NG + GN E ++L E + D +TY L+ CK G+ KA
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV 415
++KE+ L P TF+ L+ G C+ E ++ M + G +PN +TF L+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 416 FCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
+C + A + +DM R + PD L G + + A L EM+ K
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 174/346 (50%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
++ V L ++++A H L M+ G+ P + S + ++ + + M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
R + PN Y +I C+ L A E +M G+ P V + LI G+C +G +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
A K M + ++P+V+T+ +I+GFC+ G + EA ++F EM + P++VT+ LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
NGY + G+ + R+ M + P+++TY LI GLCK+G A L+ E+ K L
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
PN T+++++ G C N E A ++ + G + + T+ L+ +CK+ + D A ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 429 LRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
L++ML + + P + L NG G +L + M AK + P
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+V+ + + +R A+ F M P + + A +S Q+ A + E
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M + P+ T +I YCK+G + A M G SP VV++ LI G C +G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A ++ M + PN+ T+N+++NG CK G + EA ++ E + A + +TVTY T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
L++ Y + G + + +EM ++P I+T+N L+ G C G + L+ +
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ PNA+TF++L+ C+RNN + A IY+ M S G P+ T+ L+ CK + A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
+ ++M + + S L G + + A E+ +M + L
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 154/325 (47%), Gaps = 2/325 (0%)
Query: 123 DSSP--LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVA 180
D +P L + A+ + + + +A F M G P + ++ + + A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
+ M + SPNV T +I CK GDL A E L +M +GL P + ++N++++G
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
C G + A+K+ ++ + VT+ TL++ +CK G++ +A + EM + P
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
VT+N L+NG+ G E G +L M + P+ T+N+L+ C K A + K
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 361 ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
++ + P+ T+ L+ G C N + A+ +++ M G+S + ST+ +LI F K +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 421 DFDGAVQVLRDMLDRSMTPDSGILS 445
F A +V M + D I
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIFD 705
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 156/351 (44%), Gaps = 2/351 (0%)
Query: 91 TAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFL 150
T +I+ + + LF + C DS + F + Y ++DA
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS--VTFTELINGYCKAGHMKDAFRVHN 445
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
M + G P + + + L + + A EM + + PN++T N ++ CKSG
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
++ A++ + + + GL+ V++ L+ YC G + A ++ M + P +VTFN
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
L+NGFC G L + ++ + M +APN T+N+L+ Y N + ++++M
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
V PD TY L+ G CK K+A L +E+ + ST+S LI G R A
Sbjct: 626 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
+++ M G + ++ F K + D V + ++++ + +
Sbjct: 686 REVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 3/254 (1%)
Query: 223 KDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG-K 281
KD G P V F+ + GLL A ++ M NY + +V + N + K+ K
Sbjct: 169 KDWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK 226
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNA 341
A VF E V N +YN +I+ Q+G + L M PD+++Y+
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 342 LILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIG 401
++ G C+ G+ K L++ + + L PN+ + ++I C A + + M G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 402 YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLAL 461
P+ + LI FCK D A + +M R +TPD +A+ +G + G A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 462 ELCSEMEAKRLLPE 475
+L EM K L P+
Sbjct: 407 KLFHEMFCKGLEPD 420
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/453 (31%), Positives = 231/453 (50%), Gaps = 13/453 (2%)
Query: 31 HPLSTSLTPFRVK-------HILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTL 83
PL SL P+ K +L+K+K D L L+FF+W + S+ L++ I++H
Sbjct: 72 EPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSN--LESLCIVIHLA 129
Query: 84 ANNRKFKTAHSILRRIIN---VNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLN 140
++ K A S++ +NV S FD L+ +Y+ S P VFD F+ +
Sbjct: 130 VASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFG 189
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ-LRRAEVALAFYREMRRDCISPNVYTL 199
LR+A F +M YG + +++SCN +L+ L + + A+ +RE + NV +
Sbjct: 190 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASY 249
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
N+VI C+ G + A L M+ G +P V+S++ +++GYC G L K+ +M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
+ PN + ++I C+ KL EA FSEM + P+TV Y TLI+G+ + G+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
+ F EM + PD+LTY A+I G C+ G +A L E+ L P++ TF+ LI
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
G C + + AF+++ M G SPN T+ LI CK D D A ++L +M + P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 440 DSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
+ +++ NGL + G A++L E EA L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 189/415 (45%), Gaps = 17/415 (4%)
Query: 73 LQTHSILLHTLANNRKFKTAHSIL---------RRIINVNVASSSNTLFDALLCSYRLCD 123
+ +++I++H + + K AH +L +I+ + + F L ++L +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 124 --------SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLR 175
+ ++ ++ + KL +A F M G LP + +
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
A F+ EM I+P+V T +I +C+ GD+ A + +M GL P V+F
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
LI+GYC G + A ++ + M SPNVVT+ TLI+G CKEG L A + EM
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
+ PN TYN+++NG + GN E ++L E + D +TY L+ CK G+ KA
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV 415
++KE+ L P TF+ L+ G C+ E ++ M + G +PN +TF L+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 416 FCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
+C + A + +DM R + PD L G + + A L EM+ K
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 174/346 (50%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
++ V L ++++A H L M+ G+ P + S + ++ + + M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
R + PN Y +I C+ L A E +M G+ P V + LI G+C +G +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
A K M + ++P+V+T+ +I+GFC+ G + EA ++F EM + P++VT+ LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
NGY + G+ + R+ M + P+++TY LI GLCK+G A L+ E+ K L
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
PN T+++++ G C N E A ++ + G + + T+ L+ +CK+ + D A ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 429 LRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
L++ML + + P + L NG G +L + M AK + P
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+V+ + + +R A+ F M P + + A +S Q+ A + E
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M + P+ T +I YCK+G + A M G SP VV++ LI G C +G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A ++ M + PN+ T+N+++NG CK G + EA ++ E + A + +TVTY T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
L++ Y + G + + +EM ++P I+T+N L+ G C G + L+ +
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ PNA+TF++L+ C+RNN + A IY+ M S G P+ T+ L+ CK + A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
+ ++M + + S L G + + A E+ +M + L
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 154/325 (47%), Gaps = 2/325 (0%)
Query: 123 DSSP--LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVA 180
D +P L + A+ + + + +A F M G P + ++ + + A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
+ M + SPNV T +I CK GDL A E L +M +GL P + ++N++++G
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
C G + A+K+ ++ + VT+ TL++ +CK G++ +A + EM + P
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
VT+N L+NG+ G E G +L M + P+ T+N+L+ C K A + K
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 361 ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
++ + P+ T+ L+ G C N + A+ +++ M G+S + ST+ +LI F K +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 421 DFDGAVQVLRDMLDRSMTPDSGILS 445
F A +V M + D I
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIFD 705
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 156/351 (44%), Gaps = 2/351 (0%)
Query: 91 TAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFL 150
T +I+ + + LF + C DS + F + Y ++DA
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS--VTFTELINGYCKAGHMKDAFRVHN 445
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
M + G P + + + L + + A EM + + PN++T N ++ CKSG
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
++ A++ + + + GL+ V++ L+ YC G + A ++ M + P +VTFN
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
L+NGFC G L + ++ + M +APN T+N+L+ Y N + ++++M
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
V PD TY L+ G CK K+A L +E+ + ST+S LI G R A
Sbjct: 626 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
+++ M G + ++ F K + D V + ++++ + +
Sbjct: 686 REVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 3/254 (1%)
Query: 223 KDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG-K 281
KD G P V F+ + GLL A ++ M NY + +V + N + K+ K
Sbjct: 169 KDWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK 226
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNA 341
A VF E V N +YN +I+ Q+G + L M PD+++Y+
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 342 LILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIG 401
++ G C+ G+ K L++ + + L PN+ + ++I C A + + M G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 402 YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLAL 461
P+ + LI FCK D A + +M R +TPD +A+ +G + G A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 462 ELCSEMEAKRLLPE 475
+L EM K L P+
Sbjct: 407 KLFHEMFCKGLEPD 420
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 230/468 (49%), Gaps = 38/468 (8%)
Query: 36 SLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSI 95
+L P V +L++LK D L+ +FF W N H+++++ I+ H L R + A+S+
Sbjct: 105 TLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSV 164
Query: 96 LRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEY 155
L+ ++ ++ + +FD L + +C VFDA+F +L L +A F +MK +
Sbjct: 165 LKEMV---LSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRF 221
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
P SCN L +L + + F+++M P V+T N++I CK GD+ A
Sbjct: 222 RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAA 281
Query: 216 ---LETL--------------------------------EKMKDMGLSPTVVSFNALISG 240
E + E+MKDM P V+++NALI+
Sbjct: 282 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 341
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
+C G L + L+ M + PNVV+++TL++ FCKEG + +A + + +M+ + PN
Sbjct: 342 FCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 401
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
TY +LI+ +IGN RL EM + V+ +++TY ALI GLC + K+A L
Sbjct: 402 EYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFG 461
Query: 361 ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
++D ++PN ++++ALI G N +RA ++ + G P+ +G I C E
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 421 DFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
+ A V+ +M + + +S I + L + + G L L EM+
Sbjct: 522 KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 177/365 (48%), Gaps = 6/365 (1%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ ++++ + + +L D F MK+ P + + NA ++ + + + L FYRE
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M+ + + PNV + + ++ A+CK G + +A++ M+ +GL P ++ +LI C G
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A ++ + M V NVVT+ LI+G C ++ EA +F +M A V PN +YN
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI+G+ + N + + L E+ +KPD+L Y I GLC K + A ++ E+ +
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ N+ ++ L+ N + M + TF +LI CKN+ AV
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 427 QVL-RDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQEKIAIT 485
R D + ++ I +A+ +GL + + A L +M K L+P ++ A T
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP-----DRTAYT 652
Query: 486 SPENG 490
S +G
Sbjct: 653 SLMDG 657
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 171/390 (43%), Gaps = 36/390 (9%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C+ + ++A+ + KL + MK G P + S + + + + + A+
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
FY +MRR + PN YT +I A CK G+L A +M +G+ VV++ ALI G
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF------------------------- 276
C+ + A ++ M V PN+ ++N LI+GF
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 277 ----------CKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
C K+ A V +EMK + N++ Y TL++ Y + GN G+ L +E
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD-NLVPNASTFSALITGQCVRN 385
M ++ ++T+ LI GLCK+ KA + + D L NA+ F+A+I G C N
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 386 NSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILS 445
E A ++ M G P+ + + L+ K + A+ + M + M D +
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 446 ALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+L GLS C + + A EM + + P+
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%)
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
P F+ L + G L EA + FS+MK V P T + N L++ ++++G + R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
F++M +P + TYN +I +CK+G + A L +E+ LVP+ T++++I G
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
+ + M + P+ T+ LI+ FCK ++ R+M + P+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 444 LSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
S L + + G + A++ +M L+P
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 225/459 (49%), Gaps = 6/459 (1%)
Query: 20 SHLIHSQ-WENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSI 78
+ LI Q W L T + P + L+ + D L L +++W+ + S +L+
Sbjct: 47 ADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFK 106
Query: 79 LLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYAN 138
LLH+LAN +++ S L + +++F A+ +C +S ++ D + YAN
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNS-IIADMLVLAYAN 165
Query: 139 LNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYT 198
++ F R YG+ + SC + +LL+ R+ Y+EM R I PNV+T
Sbjct: 166 NSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFT 225
Query: 199 LNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL-- 256
N+VI A CK+G + +A + +E MK G SP VVS+N LI GYC G G K ++
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 257 -MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
M VSPN+ TFN LI+GF K+ L + +VF EM +V PN ++YN+LING G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
+ + ++M V+P+++TYNALI G CK+ K+A ++ + VP ++
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
LI C + F + M G P+ T+ LI+ C+N + + A ++ D L
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTS 464
Query: 436 SMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
PD L G R G R A L EM L P
Sbjct: 465 KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 186/352 (52%), Gaps = 9/352 (2%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLR---RAEVALAF 183
+V +A+ KT +NK RD MK YG P + S N + +L + A A
Sbjct: 228 VVINALCKT-GKMNKARDVMED---MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
+EM + +SPN+ T N++I + K +LP +++ ++M D + P V+S+N+LI+G CN
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
G + A+ M+ M + V PN++T+N LINGFCK L EA +F +K P T
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
YN LI+ Y ++G + G L EEM R + PD+ TYN LI GLC++G + A L +L
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
L P+ TF L+ G C + S +A + + M+ +G P T+ +++ +CK +
Sbjct: 464 SKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 424 GAVQVLRDM-LDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
A + M +R + + + L G S+ G+ A L +EM K L+P
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 3/289 (1%)
Query: 190 DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGL 249
D + N +M++ AY + E ++ G + +S L+ +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 250 ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
+ M ++ PNV TFN +IN CK GK+++A V +MKV +PN V+YNTLI+
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 310 GYSQIGNCETGMR---LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
GY ++G + + +EM N V P++ T+N LI G KD + + KE+ +
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ PN ++++LI G C A + M S G PN T+ LI+ FCKN+ A+
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ + + P + + + L + + G+ L EME + ++P+
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 158/331 (47%), Gaps = 21/331 (6%)
Query: 63 VHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLC 122
V+ C+P+ + T L N K A ++L+ ++ N S + T F+ L+ +
Sbjct: 251 VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE-NDVSPNLTTFNILIDGFWKD 309
Query: 123 DSSP------------------LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESC 164
D+ P + ++++ N K+ +A +M G P L +
Sbjct: 310 DNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITY 369
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
NA ++ + + AL + ++ P NM+I AYCK G + E+M+
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
G+ P V ++N LI+G C G + A K+ + + + P++VTF+ L+ G+C++G+ +
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRK 488
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ-VKPDILTYNALI 343
A + EM + P +TYN ++ GY + GN + + +M + + ++ ++ +YN L+
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 344 LGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G + GK + A L+ E+ + LVPN T+
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 239/453 (52%), Gaps = 11/453 (2%)
Query: 37 LTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPS-SHTLQTHSILLHTLANNRKFKTAHSI 95
L P V +L + +ND L F + + P+ HT + S ++H L + + A S
Sbjct: 76 LNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSC 135
Query: 96 LRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEY 155
L R+I + S + ++L ++ C S+ VFD + +TY KLR+A F ++
Sbjct: 136 LLRMIRRS-GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSK 194
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
GF ++++CNA + SL+++ E+A Y+E+ R + NVYTLN+++ A CK G + +
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 216 LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLING 275
L ++++ G+ P +V++N LIS Y +KGL+ A ++ + M SP V T+NT+ING
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 276 FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
CK GK A VF+EM + ++P++ TY +L+ + G+ ++F +M V PD
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 336 ILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYR 395
++ +++++ + G KA + + L+P+ ++ LI G C + A +
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 396 SMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
M G + + T+ ++ CK + A ++ +M +R++ PDS L+ L +G + G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 456 RKRLALELCSEMEAKRL---------LPEGFGQ 479
+ A+EL +M+ KR+ L +GFG+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 151/278 (54%), Gaps = 2/278 (0%)
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
N L L + + A + EM + P+ YTL ++I +CK G+L A+E +KMK+
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
+ VV++N L+ G+ G + A ++ + M + + P ++++ L+N C +G L E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
A+RV+ EM N+ P + N++I GY + GN G E+M PD ++YN LI
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 345 GLCKDGKTKKAANLVKELDKDN--LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
G ++ KA LVK+++++ LVP+ T+++++ G C +N + A + R M G
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Query: 403 SPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
+P+ ST+ +I+ F ++ A ++ +ML R +PD
Sbjct: 689 NPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 158/332 (47%), Gaps = 1/332 (0%)
Query: 144 DATHTFL-RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMV 202
+ TFL +++E G P + + N +S+ E A M SP VYT N V
Sbjct: 252 EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
Query: 203 ICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRV 262
I CK G RA E +M GLSP ++ +L+ C KG + K+ S M + V
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 263 SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMR 322
P++V F+++++ F + G L +A F+ +K A + P+ V Y LI GY + G M
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 323 LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC 382
L EM + D++TYN ++ GLCK +A L E+ + L P++ T + LI G C
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491
Query: 383 VRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSG 442
N + A ++++ M + T+ L+ F K D D A ++ DM+ + + P
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 443 ILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
S L N L G A + EM +K + P
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 166/351 (47%), Gaps = 2/351 (0%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
++ V K A F M G P + + L + + +MR
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
+ P++ + ++ + +SG+L +AL +K+ GL P V + LI GYC KG++
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
+A+ +++ M + +VVT+NT+++G CK L EA ++F+EM + P++ T LI
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
+G+ ++GN + M LF++M +++ D++TYN L+ G K G A + ++ ++
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
P ++S L+ C + + AF+++ M S P +I +C++ +
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 429 LRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR--LLPEGF 477
L M+ PD + L G R A L +ME ++ L+P+ F
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 192/429 (44%), Gaps = 27/429 (6%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNT----LFDA----------- 114
S + T++ +++ L + K++ A + ++ ++ S T L +A
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 115 LLCSYRLCDSSP--LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
+ R D P + F ++ + L A F +KE G +P N + L+
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD----NVIYTILI 417
Query: 173 Q--LRRA--EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLS 228
Q R+ VA+ EM + + +V T N ++ CK L A + +M + L
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 229 PTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRV 288
P + LI G+C G L A+++ M R+ +VVT+NTL++GF K G + A +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 289 FSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
+++M + P ++Y+ L+N G+ R+++EM +KP ++ N++I G C+
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 349 DGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI--GYSPNE 406
G + ++++ + VP+ +++ LI G N +AF + + M G P+
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 407 STFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSE 466
T+ ++ FC+ A VLR M++R + PD + + NG A + E
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 467 MEAKRLLPE 475
M + P+
Sbjct: 718 MLQRGFSPD 726
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 141/287 (49%), Gaps = 2/287 (0%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C + ++ + L +A F M E P + + +L + A+
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+++M+ I +V T N ++ + K GD+ A E M + PT +S++ L++
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C+KG L A ++ M + + P V+ N++I G+C+ G + +M P+
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQ--VKPDILTYNALILGLCKDGKTKKAANLV 359
++YNTLI G+ + N L ++M Q + PD+ TYN+++ G C+ + K+A ++
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
+++ + + P+ ST++ +I G ++N AF+I+ M G+SP++
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 231/474 (48%), Gaps = 14/474 (2%)
Query: 7 FSGTDLDFVNIAHSHLIHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNC 66
F + D ++ L +W +L+ + R+ H L+L+F WV
Sbjct: 52 FGVSGFDMEKSIYNILTIDRWGSLNHMDYRQARLRLVH--------GKLALKFLKWVVK- 102
Query: 67 NP---SSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCD 123
P + H +Q I H L R + A IL+ + ++ S+ +F AL+ +YRLC+
Sbjct: 103 QPGLETDHIVQLVCITTHILVRARMYDPARHILKEL--SLMSGKSSFVFGALMTTYRLCN 160
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
S+P V+D + + Y ++D+ F M YGF P++ +CNA L S+++ +F
Sbjct: 161 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
+EM + I P+V T N++I C G ++ ++KM+ G +PT+V++N ++ YC
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
KG A+++ M + V +V T+N LI+ C+ ++ + Y + +M+ + PN VT
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
YNTLING+S G +L EM + P+ +T+NALI G +G K+A + ++
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
L P+ ++ L+ G C + A Y M G T+ +I CKN D
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
AV +L +M + PD SAL NG + GR + A E+ + L P G
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 161/341 (47%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ ++ V Y + + A MK G + + N + L + R R+
Sbjct: 269 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
MR+ I PN T N +I + G + A + L +M GLSP V+FNALI G+ ++G
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
ALKM +M ++P+ V++ L++G CK + A + MK V +TY
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
+I+G + G + + L EM ++ + PDI+TY+ALI G CK G+ K A +V + +
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
L PN +S LI C + A +IY +M G++ + TF +L++ CK A
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
+ +R M + P++ L NG G A + EM
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 201/464 (43%), Gaps = 69/464 (14%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY------------ 119
T+ T++ +LH +FK A +L + + V DA +C+Y
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV--------DADVCTYNMLIHDLCRSNR 318
Query: 120 -------------RLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNA 166
R+ + + ++ + ++N K+ A+ M +G P + NA
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 167 FLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMG 226
+ + + AL + M ++P+ + +++ CK+ + A +MK G
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 227 LSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
+ +++ +I G C G L A+ + + M + P++VT++ LINGFCK G+ A
Sbjct: 439 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 498
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGL 346
+ + ++PN + Y+TLI ++G + +R++E M D T+N L+ L
Sbjct: 499 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 558
Query: 347 CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
CK GK +A ++ + D ++PN +F LI G +AF ++ MT +G+ P
Sbjct: 559 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 618
Query: 407 STFG-----------------------------------MLISVFCKNEDFDGAVQVLRD 431
T+G L++ CK+ + AV + +
Sbjct: 619 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 678
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK-RLLP 474
M+ RS+ PDS ++L +GL R G+ +A+ E EA+ +LP
Sbjct: 679 MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 722
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 172/385 (44%), Gaps = 42/385 (10%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ---LRRAEVALAFYR 185
FD + Y N + A F M + G PT + + L L + LR AE F +
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE---KFLK 642
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
+ + + N ++ A CKSG+L +A+ +M + P ++ +LISG C KG
Sbjct: 643 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Query: 246 LLGLAL------------------------------------KMKSLMGNYRVSPNVVTF 269
+A+ + M N +P++VT
Sbjct: 703 KTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTT 762
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
N +I+G+ + GK+ + + EM N PN TYN L++GYS+ + T L+ +
Sbjct: 763 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 822
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
N + PD LT ++L+LG+C+ + ++K + + TF+ LI+ C
Sbjct: 823 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 882
Query: 390 AFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYN 449
AF + + MTS+G S ++ T ++SV +N F + VL +M + ++P+S L N
Sbjct: 883 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 942
Query: 450 GLSRCGRKRLALELCSEMEAKRLLP 474
GL R G + A + EM A ++ P
Sbjct: 943 GLCRVGDIKTAFVVKEEMIAHKICP 967
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 181/408 (44%), Gaps = 27/408 (6%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
T T+ LL L + A L+ + V A+ +++ LL + +C S
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP-AAVDTVMYNTLLTA--MCKS------- 666
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR-RD 190
NL K A F M + LP + + +S L + + +A+ F +E R
Sbjct: 667 -----GNLAK---AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
+ PN + K+G + E+M ++G +P +V+ NA+I GY G +
Sbjct: 719 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
+ MGN PN+ T+N L++G+ K + ++ ++ + + + P+ +T ++L+ G
Sbjct: 779 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
+ E G+++ + V+ D T+N LI C +G+ A +LVK + + +
Sbjct: 839 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898
Query: 371 ASTFSALITGQCVRNNSERAFQ----IYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
T A+++ V N + R FQ + M+ G SP + LI+ C+ D A
Sbjct: 899 KDTCDAMVS---VLNRNHR-FQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
V +M+ + P + SA+ L++CG+ A L M +L+P
Sbjct: 955 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 1002
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 138/301 (45%), Gaps = 4/301 (1%)
Query: 140 NKLRDATHTFLRMKEY---GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
+K +D + +FL + G LP +C++ + + + E+ L + + +
Sbjct: 805 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 864
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
YT NM+I C +G++ A + ++ M +G+S + +A++S + +
Sbjct: 865 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 924
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M +SP + LING C+ G + A+ V EM + P V + ++ ++ G
Sbjct: 925 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 984
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+ L M + ++ P I ++ L+ CK+G +A L + L + +++
Sbjct: 985 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1044
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI-SVFCKNEDFDGAVQVLRDMLDR 435
LITG C + + AF++Y M G+ N +T+ LI + + F GA +L+D+L R
Sbjct: 1045 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLAR 1104
Query: 436 S 436
Sbjct: 1105 G 1105
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 140/324 (43%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+M G P + + NA + ++ + E EM PN+ T N+++ Y K
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
D+ + + G+ P ++ ++L+ G C +L + LK+ V + TFN
Sbjct: 809 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
LI+ C G+++ A+ + M ++ + T + +++ ++ + + EM +
Sbjct: 869 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 928
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
+ P+ Y LI GLC+ G K A + +E+ + P SA++ ++ A
Sbjct: 929 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
+ R M + P ++F L+ + CKN + A+++ M + + D + L G
Sbjct: 989 TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITG 1048
Query: 451 LSRCGRKRLALELCSEMEAKRLLP 474
L G LA EL EM+ L
Sbjct: 1049 LCAKGDMALAFELYEEMKGDGFLA 1072
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 230/452 (50%), Gaps = 8/452 (1%)
Query: 25 SQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLA 84
SQW + ++ LTP V LL L L+ FN+V++ + QT + + ++
Sbjct: 57 SQWHIVEHVADKLTPSLVSTTLLSLVKTPNLA---FNFVNHIDLYRLDFQTQCLAIAVIS 113
Query: 85 NNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY-RLCDSSPLVFDAVFKTYANLNKLR 143
K +L+ ++ S N LFD L+ ++ RL S ++FD + + L +
Sbjct: 114 KLSSPKPVTQLLKEVVTSRKNSIRN-LFDELVLAHDRLETKSTILFDLLVRCCCQLRMVD 172
Query: 144 DATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVI 203
+A F MKE GF P E+CN L+ L +L R E A FY +M R I NVYT N++I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 204 CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVS 263
CK G L +A L M+ G+ PT+V++N L+ G+ +G + A + S M +
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
P++ T+N +++ C EG+ E R EMK + P++V+YN LI G S G+ E
Sbjct: 293 PDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
+EM + + P TYN LI GL + K + A L++E+ + +V ++ T++ LI G C
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
++++AF ++ M + G P + T+ LI V C+ A ++ ++ + M PD +
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 444 LSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
++ L +G G A L EM+ + P+
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPD 501
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 172/350 (49%), Gaps = 4/350 (1%)
Query: 119 YRL-CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRA 177
YR+ S+ F+ + KL+ A M+ +G PT+ + N + R
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 178 EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
E A EM+ P++ T N ++ C G RA E L +MK++GL P VS+N L
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNIL 333
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
I G N G L +A + M + P T+NTLI+G E K+ A + E++ +
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
++VTYN LINGY Q G+ + L +EM + ++P TY +LI LC+ KT++A
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
L +++ + P+ + L+ G C N +RAF + + M + +P++ T+ L+ C
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
F+ A +++ +M R + PD + L +G S+ G + A + EM
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 157/314 (50%)
Query: 145 ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVIC 204
A+ MKE G +P S N + E+A A+ EM + + P YT N +I
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 205 AYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSP 264
+ A + ++++ G+ V++N LI+GYC G A + M + P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 265 NVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF 324
T+ +LI C++ K EA +F ++ + P+ V NTL++G+ IGN + L
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
+EM + PD +TYN L+ GLC +GK ++A L+ E+ + + P+ +++ LI+G +
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGIL 444
+++ AF + M S+G++P T+ L+ KN++ + A ++LR+M + P+
Sbjct: 551 GDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Query: 445 SALYNGLSRCGRKR 458
++ +S K+
Sbjct: 611 CSVIEAMSNLDAKK 624
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 130/253 (51%), Gaps = 7/253 (2%)
Query: 133 FKTYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYR 185
F TY L NK+ A ++E G + + N ++ Q A+ A A +
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
EM D I P +T +I C+ A E EK+ G+ P +V N L+ G+C G
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
+ A + M ++P+ VT+N L+ G C EGK EA + EMK + P+ ++YN
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
TLI+GYS+ G+ + + +EM P +LTYNAL+ GL K+ + + A L++E+ +
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSE 601
Query: 366 NLVPNASTFSALI 378
+VPN S+F ++I
Sbjct: 602 GIVPNDSSFCSVI 614
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 23/263 (8%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALL---CSYRLCDSSPLV 128
T T++ L+H L K + A ++R I + S T ++ L+ C + + +
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVT-YNILINGYCQHGDAKKAFAL 419
Query: 129 FDAVFK--------TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ 173
D + TY +L NK R+A F ++ G P L N +
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 174 LRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
+ + A + +EM I+P+ T N ++ C G A E + +MK G+ P +S
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK--EGKLHEAYRVFSE 291
+N LISGY KG A ++ M + +P ++T+N L+ G K EG+L E + E
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAE--ELLRE 597
Query: 292 MKVANVAPNTVTYNTLINGYSQI 314
MK + PN ++ ++I S +
Sbjct: 598 MKSEGIVPNDSSFCSVIEAMSNL 620
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 219/418 (52%), Gaps = 1/418 (0%)
Query: 55 LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDA 114
LS FF W + S H+LQ+ ++ L ++ FKTAH +L ++ + SS L
Sbjct: 62 LSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSL 121
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
+ + VF + YA + D+ F +++ G P L++C L+SL++
Sbjct: 122 VGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQ 181
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
R + +++M + + N++ N+++ A KSGD +A + L +M++ G+ P + ++
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTY 241
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
N LIS YC K + AL ++ M V+PN+VT+N+ I+GF +EG++ EA R+F E+K
Sbjct: 242 NTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK- 300
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
+V N VTY TLI+GY ++ + + +RL E M P ++TYN+++ LC+DG+ ++
Sbjct: 301 DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIRE 360
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
A L+ E+ + P+ T + LI C + A ++ + M G + ++ LI
Sbjct: 361 ANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
FCK + + A + L M+++ +P S L +G ++ +L E E + L
Sbjct: 421 GFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ + + Y +N + +A M+ GF P + + N+ L L + R A E
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M I P+ T N +I AYCK D+ A++ +KM + GL + S+ ALI G+C
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLE 427
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A + M SP T++ L++GF + K E ++ E + + + Y
Sbjct: 428 LENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRG 487
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI ++ + LFE M + + D + + + + GK +A+ L +
Sbjct: 488 LIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRR 547
Query: 367 LVPNASTFSALITGQCVRNNSERAF 391
L+ N + ++ N+ R F
Sbjct: 548 LMVNLKLYKSISASYAGDNDVLRFF 572
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 218/437 (49%), Gaps = 7/437 (1%)
Query: 44 HILLKLKNDDVLSL------EFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILR 97
H ++ L N + LSL FF ++ + T++T+ +L LA + F A S++
Sbjct: 83 HHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIE 142
Query: 98 RIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGF 157
+++ +S++++F +L+ R+ + DA+ TY +L + DA F +++ F
Sbjct: 143 LVVSRKGKNSASSVFISLV-EMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRF 201
Query: 158 LPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALE 217
+ C L +++L FY E+ NVY N+++ +CK G++ A +
Sbjct: 202 DVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQK 261
Query: 218 TLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFC 277
+++ L PTVVSFN LI+GYC G L ++K M R P+V T++ LIN C
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 278 KEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDIL 337
KE K+ A+ +F EM + PN V + TLI+G+S+ G + +++M ++PDI+
Sbjct: 322 KENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIV 381
Query: 338 TYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
YN L+ G CK+G A N+V + + L P+ T++ LI G C + E A +I + M
Sbjct: 382 LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
G + F L+ CK A + LR+ML + PD + + + + G
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDA 501
Query: 458 RLALELCSEMEAKRLLP 474
+ +L EM++ +P
Sbjct: 502 QTGFKLLKEMQSDGHVP 518
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 165/326 (50%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
VF+ + + + DA F + + PT+ S N ++ ++ + +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
+ P+V+T + +I A CK + A ++M GL P V F LI G+ G +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
L + M + + P++V +NTL+NGFCK G L A + M + P+ +TY TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
I+G+ + G+ ET + + +EM +N ++ D + ++AL+ G+CK+G+ A ++E+ + +
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 368 VPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQ 427
P+ T++ ++ C + +++ F++ + M S G+ P+ T+ +L++ CK A
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADM 541
Query: 428 VLRDMLDRSMTPDSGILSALYNGLSR 453
+L ML+ + PD + L G R
Sbjct: 542 LLDAMLNIGVVPDDITYNTLLEGHHR 567
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 8/269 (2%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ--LRRAEVAL--A 182
+ A+ NK+ A F M + G +P + ++L+ R E+ L
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPN----DVIFTTLIHGHSRNGEIDLMKE 366
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
Y++M + P++ N ++ +CK+GDL A ++ M GL P +++ LI G+C
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
G + AL+++ M + + V F+ L+ G CKEG++ +A R EM A + P+ V
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
TY +++ + + G+ +TG +L +EM + P ++TYN L+ GLCK G+ K A L+ +
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAM 546
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAF 391
+VP+ T++ L+ G NS + +
Sbjct: 547 LNIGVVPDDITYNTLLEGHHRHANSSKRY 575
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%)
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
+AL+ Y + G + A++ L +R + L++ K + + E+
Sbjct: 174 DALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILD 233
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
A N +N L+N + + GN ++F+E+ + ++P ++++N LI G CK G +
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
L +++K P+ T+SALI C N + A ++ M G PN+ F LI
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+N + D + + ML + + PD + + L NG + G A + M + L P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 475 E 475
+
Sbjct: 414 D 414
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 241/496 (48%), Gaps = 44/496 (8%)
Query: 21 HLIHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCN---PSSHTLQTHS 77
+L +W LH S+SLT + +L + ++ L+LEF+NWV N S + +
Sbjct: 39 NLRQRRWNTLHQFSSSLTNPLISRVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASC 98
Query: 78 ILLHTLANNRKFKTAHSILRRIINVNVASSSNT-LFDALLCSYRLCDSSPLVFDAVFKTY 136
+++H L +R+F A SI+ +++V S + L+ SY+ C SSP VFD++ +
Sbjct: 99 VMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRAC 158
Query: 137 ANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
+ A + + GF ++ + N F+ LL + + Y+EM NV
Sbjct: 159 TQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENV 218
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL----K 252
T N+VI ++CK L AL +M G+ P VVSFN +I G C G + AL K
Sbjct: 219 NTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGK 278
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
M + GN+ VSPN VT+N++INGFCK G+L A R+ +M + V N TY L++ Y
Sbjct: 279 MGMMSGNF-VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYG 337
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
+ G+ + +RL +EM + + + YN+++ L +G + A +++++++ N+ +
Sbjct: 338 RAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRF 397
Query: 373 TFSALITGQC-----------VRNNSER------------------------AFQIYRSM 397
T + ++ G C R SE+ A QI SM
Sbjct: 398 TQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSM 457
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
G S + +FG LI + K + A+++ M+ + T + I +++ NGLS+ G
Sbjct: 458 LVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMA 517
Query: 458 RLALELCSEMEAKRLL 473
A + + ME K ++
Sbjct: 518 GAAEAVVNAMEIKDIV 533
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 150/323 (46%), Gaps = 6/323 (1%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
D + + A+ Y +A M G + N+ + L E A++
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
R+M + + +T +V+ C++G + A+E ++ + L +V N L+ +
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFV 442
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
L A ++ M +S + ++F TLI+G+ KEGKL A ++ M N N V
Sbjct: 443 RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLV 502
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
YN+++NG S+ G + M ++K DI+TYN L+ K G ++A +++ ++
Sbjct: 503 IYNSIVNGLSKRGMAGAAEAVVNAM---EIK-DIVTYNTLLNESLKTGNVEEADDILSKM 558
Query: 363 DKDNLVPNAS--TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
K + + S TF+ +I C + E+A ++ + M G P+ T+G LI+ F K+
Sbjct: 559 QKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHR 618
Query: 421 DFDGAVQVLRDMLDRSMTPDSGI 443
+ V++ ++ + +TP I
Sbjct: 619 SQEKVVELHDYLILQGVTPHEHI 641
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 117/232 (50%), Gaps = 6/232 (2%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A+ F R++ + ++ N ++ + + L A + L M GLS +SF LI
Sbjct: 415 AVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLID 474
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
GY +G L AL++ M + N+V +N+++NG K G A V + M++ ++
Sbjct: 475 GYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI-- 532
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDI--LTYNALILGLCKDGKTKKAAN 357
VTYNTL+N + GN E + +M + + + +T+N +I LCK G +KA
Sbjct: 533 --VTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKE 590
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
++K + + +VP++ T+ LIT + E+ +++ + G +P+E +
Sbjct: 591 VLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIY 642
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 134/289 (46%), Gaps = 6/289 (2%)
Query: 177 AEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNA 236
++ AL EM + N N ++ GD+ A+ L M + +
Sbjct: 342 SDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAI 401
Query: 237 LISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
++ G C G + A++ + + ++ ++V NTL++ F ++ KL A ++ M V
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
++ + +++ TLI+GY + G E + +++ M + +++ YN+++ GL K G A
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNES--TFGMLIS 414
+V ++ ++V T++ L+ N E A I M + S TF ++I+
Sbjct: 522 AVVNAMEIKDIV----TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMIN 577
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
CK ++ A +VL+ M++R + PDS L S+ + +EL
Sbjct: 578 HLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVEL 626
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
++V+ EM N T+N +I + + + +F M + V P+++++N +I G
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 346 LCKDGKTKKAANLVKELD--KDNLV-PNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
CK G + A L+ ++ N V PNA T++++I G C + A +I M G
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 403 SPNESTFGMLISVFCK-----------------------------------NEDFDGAVQ 427
NE T+G L+ + + D +GA+
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 428 VLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
VLRDM ++M D + + GL R G + A+E ++ K+L+ +
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVED 430
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 221/472 (46%), Gaps = 9/472 (1%)
Query: 15 VNIAHSHLIHSQWE----NLHPLSTSLTPF----RVKHILLKLKNDDVLSLEFFNWVHNC 66
V++ S L HS + NL SL P + +LL+ ++D ++ FF WV
Sbjct: 47 VDVICSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFD 106
Query: 67 NPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP 126
+ + +LLH L +++KF A L +I + +F L+ + C+ P
Sbjct: 107 LGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDP 166
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+VFD + K Y L + + F + + GF ++ +CN L+ LL+L E Y
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M R I PN YT N++ +C + + LEKM++ G P +V++N L+S YC +G
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A + +M RV P++VT+ +LI G CK+G++ EA++ F M + P+ ++YNT
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI Y + G + +L EM N V PD T ++ G ++G+ A N V EL +
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLK 406
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIY-RSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
+ LI C A + R + G+ T+ LI + + + A
Sbjct: 407 VDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEA 466
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ + + +++ D+ AL L R GR R A L +EM + P+ F
Sbjct: 467 LVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSF 518
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 129/327 (39%), Gaps = 37/327 (11%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ ++ + +Y +L++A + + M +P L + + + L + R A +
Sbjct: 272 VTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHR 331
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M I P+ + N +I AYCK G + ++ + L +M + P + ++ G+ +G
Sbjct: 332 MVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGK------------------------- 281
L A+ + +V + LI C+EGK
Sbjct: 392 LLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYN 451
Query: 282 -----------LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
+ EA + ++K N + TY LI +IG L EM +
Sbjct: 452 NLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDS 511
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRN-NSER 389
+VKPD AL+ G CK+ KA L+ + + + ++++L+ C ++
Sbjct: 512 EVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKK 571
Query: 390 AFQIYRSMTSIGYSPNESTFGMLISVF 416
A ++ M +G+ PN T LI V
Sbjct: 572 ALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 179/347 (51%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
++ +++ + N + DA + F M G P + + N+ + L R A
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
+M I+PNV T + +I A+ K G L A + ++M + P + ++++LI+G+C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
L A M LM + PNVVT+NTLI GFCK ++ E +F EM + NTV
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
TYNTLI G Q G+C+ ++F++M + V PDI+TY+ L+ GLCK GK +KA + + L
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
K + P+ T++ +I G C E + ++ S++ G PN + +IS FC+
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 423 DGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
+ A + R+M + P+SG + L R G K + EL EM +
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 206/424 (48%), Gaps = 21/424 (4%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY----RLCDSS 125
S+ L +++IL++ + A ++L +++ + TL +LL Y R+ ++
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTL-SSLLNGYCHGKRISEAV 170
Query: 126 PLVFDAVFK--------TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSS 170
LV D +F T+ L NK +A RM G P L + ++
Sbjct: 171 ALV-DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 171 LLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT 230
L + ++AL+ ++M + I +V +I A C ++ AL +M + G+ P
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 231 VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS 290
VV++N+LI CN G A ++ S M +++PNVVTF+ LI+ F KEGKL EA +++
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
EM ++ P+ TY++LING+ + +FE M P+++TYN LI G CK
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 351 KTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFG 410
+ ++ L +E+ + LV N T++ LI G + + A +I++ M S G P+ T+
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 411 MLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
+L+ CK + A+ V + M PD + + G+ + G+ +L + K
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 471 RLLP 474
+ P
Sbjct: 530 GVKP 533
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 208/450 (46%), Gaps = 20/450 (4%)
Query: 43 KHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINV 102
+++LL LK DD + L F + P ++ + LL +A KF S+ R+ N+
Sbjct: 53 RNVLLDLKLDDAVDL--FGEMVQSRPLPSIVEFNK-LLSAIAKMNKFDLVISLGERMQNL 109
Query: 103 NVAS---SSNTLFD------------ALLCSYRLCDSSP--LVFDAVFKTYANLNKLRDA 145
++ S N L + A+L P + ++ Y + ++ +A
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 146 THTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICA 205
+M + P + N + L +A A+A M P+++T V+
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 206 YCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPN 265
CK GD+ AL L+KM+ + VV + +I CN + AL + + M N + PN
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 266 VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE 325
VVT+N+LI C G+ +A R+ S+M + PN VT++ LI+ + + G +L++
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 326 EMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRN 385
EM + + PDI TY++LI G C + +A ++ + + + PN T++ LI G C
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 386 NSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILS 445
E +++R M+ G N T+ LI + D D A ++ + M+ + PD S
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 446 ALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
L +GL + G+ AL + ++ ++ P+
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 195/420 (46%), Gaps = 22/420 (5%)
Query: 64 HNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSYR 120
C P L T+ +++ L A S+L+++ + + T+ DAL C+Y+
Sbjct: 214 RGCQPD---LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL-CNYK 269
Query: 121 LCDSS---------------PLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCN 165
+ + + ++++ + N + DA+ M E P + + +
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 166 AFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDM 225
A + + ++ + A Y EM + I P+++T + +I +C L A E M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 226 GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
P VV++N LI G+C + +++ M + N VT+NTLI G + G A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
++F +M V P+ +TY+ L++G + G E + +FE + +++++PDI TYN +I G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 346 LCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
+CK GK + +L L + PN ++ +I+G C + E A ++R M G PN
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 406 ESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCS 465
T+ LI ++ D + +++++M D+ +S + N L ++ LE+ S
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 149/298 (50%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A+ + EM + P++ N ++ A K + E+M+++ +S + S+N LI+
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
+C + L LAL + M P++VT ++L+NG+C ++ EA + +M V P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
NTVT+NTLI+G + L + M +PD+ TY ++ GLCK G A +L+
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
K+++K + + ++ +I C N A ++ M + G PN T+ LI C
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ A ++L DM++R + P+ SAL + + G+ A +L EM + + P+ F
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 180/343 (52%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
L+++ + + DA + F M+ G P + + ++ +S L R A +
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M I+P+V+T + +I A+ K G L A + ++M + P++V++++LI+G+C
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A +M M + P+VVT+NTLI GFCK ++ E VF EM + NTVTYN
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI G Q G+C+ +F+EM + V P+I+TYN L+ GLCK+GK +KA + + L +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ P T++ +I G C E + ++ +++ G P+ + +IS FC+ + A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
+ ++M + P+SG + L R G + + EL EM +
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 206/424 (48%), Gaps = 21/424 (4%)
Query: 71 HTLQTHSILLHTLANNRKFKTAHSILRRIINV----NVASSSNTLFDALLCSYRLCDSSP 126
H T+SIL++ + A ++L +++ + N+ + S +L + S R+ ++
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLS-SLLNGYCHSKRISEAVA 172
Query: 127 LVFDAVFKT--------YANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSL 171
LV D +F T + L NK +A RM G P L + ++ L
Sbjct: 173 LV-DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 172 LQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
+ ++A +M + + P V N +I CK + AL ++M+ G+ P V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 232 VSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
V++++LIS CN G A ++ S M +++P+V TF+ LI+ F KEGKL EA +++ E
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
M ++ P+ VTY++LING+ + ++FE M PD++TYN LI G CK +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 352 TKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGM 411
++ + +E+ + LV N T++ LI G + + A +I++ M S G PN T+
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 412 LISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR 471
L+ CKN + A+ V + M P + + G+ + G+ +L + K
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 472 LLPE 475
+ P+
Sbjct: 532 VKPD 535
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 165/335 (49%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
KL DA F M + P++ + LS++ ++ + +V ++ +M+ I N YT +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++I +C+ LP AL L KM +G P +V+ ++L++GYC+ + A+ + M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
PN VTFNTLI+G K EA + M P+ VTY ++NG + G+ +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
L +M + +++P +L YN +I GLCK A NL KE++ + PN T+S+LI+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C A ++ M +P+ TF LI F K A ++ +M+ RS+ P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
S+L NG R A ++ M +K P+
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 162/328 (49%), Gaps = 17/328 (5%)
Query: 100 INVNVASSSNTLFDALLCSY-RLCDSSPLV--------------FDAVFKTYANLNKLRD 144
I NV + S+ + + LC+Y R D+S L+ F A+ + KL +
Sbjct: 287 IRPNVVTYSSLI--SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 145 ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVIC 204
A + M + P++ + ++ ++ R + A + M P+V T N +I
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 205 AYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSP 264
+CK + +E +M GL V++N LI G G +A ++ M + V P
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 265 NVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF 324
N++T+NTL++G CK GKL +A VF ++ + + P TYN +I G + G E G LF
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
+ VKPD++ YN +I G C+ G ++A L KE+ +D +PN+ ++ LI +
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGML 412
+ E + ++ + M S G++ + ST G++
Sbjct: 585 GDREASAELIKEMRSCGFAGDASTIGLV 612
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 177/385 (45%), Gaps = 35/385 (9%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
S + F + A +NK +M+ G + + ++ + + +ALA
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI------ 238
+M + PN+ TL+ ++ YC S + A+ +++M G P V+FN LI
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 239 -----------------------------SGYCNKGLLGLALKMKSLMGNYRVSPNVVTF 269
+G C +G LA + + M ++ P V+ +
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
NT+I+G CK + +A +F EM+ + PN VTY++LI+ G RL +M
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
++ PD+ T++ALI K+GK +A L E+ K ++ P+ T+S+LI G C+ + +
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 390 AFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYN 449
A Q++ M S P+ T+ LI FCK + + ++V R+M R + ++ + L
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 450 GLSRCGRKRLALELCSEMEAKRLLP 474
GL + G +A E+ EM + + P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPP 464
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%)
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
E KL +A +F EM + P+ + ++ L++ +++ + + L E+M + + T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMT 398
Y+ LI C+ + A ++ ++ K PN T S+L+ G C A + M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 399 SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKR 458
GY PN TF LI + A+ ++ M+ + PD + NGL + G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 459 LALELCSEMEAKRLLP 474
LA L ++ME +L P
Sbjct: 239 LAFNLLNKMEQGKLEP 254
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 204/417 (48%), Gaps = 27/417 (6%)
Query: 63 VHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSY 119
V C P L T+ I+++ L A S+L+++ + NT+ DAL C+Y
Sbjct: 214 VKGCQPD---LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL-CNY 269
Query: 120 RLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV 179
+ N+N DA + F M G P + + N+ + L R
Sbjct: 270 K-----------------NVN---DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A +M I+PNV T + +I A+ K G L A + ++M + P + ++++LI+
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
G+C L A M LM + PNVVT+NTLI GFCK ++ E +F EM +
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
NTVTY TLI+G+ Q C+ +F++M + V PDI+TY+ L+ GLC +GK + A +
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
+ L + + P+ T++ +I G C E + ++ S++ G PN T+ ++S FC+
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEG 476
+ A + R+M + PDSG + L R G K + EL EM + R + +
Sbjct: 550 GLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 606
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 195/406 (48%), Gaps = 18/406 (4%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVF 129
SH L T+SIL++ + A ++L +++ + TL
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL------------------ 154
Query: 130 DAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRR 189
+++ + + N++ DA +M E G+ P + N + L + RA A+A M
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 190 DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGL 249
P++ T +V+ CK GD+ AL L+KM+ + P VV +N +I CN +
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 250 ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
AL + + M N + PNVVT+N+LI C G+ +A R+ S+M + PN VT++ LI+
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 310 GYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP 369
+ + G +L++EM + + PDI TY++LI G C + +A ++ + + + P
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 370 NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
N T++ LI G C + +++R M+ G N T+ LI F + + D A V
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 430 RDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ M+ + PD S L +GL G+ AL + ++ ++ P+
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 177/360 (49%), Gaps = 2/360 (0%)
Query: 117 CSYRLCDSSPLVFDAVFKTYANLN--KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
CS+ + D S + +D + LN KL DA + F M + P++ + LS++ ++
Sbjct: 35 CSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKM 94
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
+ ++ ++ +M+ IS N+YT +++I +C+ L AL L KM +G P +V+
Sbjct: 95 NKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 154
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
N+L++G+C+ + A+ + M P+ TFNTLI+G + + EA + M V
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
P+ VTY ++NG + G+ + + L ++M + +++P ++ YN +I LC
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
A NL E+D + PN T+++LI C A ++ M +PN TF LI
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
F K A ++ +M+ RS+ PD S+L NG R A + M +K P
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 151/298 (50%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A+ + +M + P++ + ++ A K + E+M+++G+S + +++ LI+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
+C + L LAL + + M P++VT N+L+NGFC ++ +A + +M P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
++ T+NTLI+G + + L + M +PD++TY ++ GLCK G A +L+
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
K++++ + P ++ +I C N A ++ M + G PN T+ LI C
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ A ++L DM++R + P+ SAL + + G+ A +L EM + + P+ F
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 162/336 (48%), Gaps = 22/336 (6%)
Query: 75 THSILLHTLANNRKFKTAHSIL----RRIINVNVASSSNTLFDALLCSYRLCDSSPLVFD 130
T++ L+ L N ++ A +L R IN NV + S L DA + +L ++ L +D
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS-ALIDAFVKEGKLVEAEKL-YD 350
Query: 131 AVFK--------TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLR 175
+ K TY++L ++L +A H F M P + + N + + +
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
R + + +REM + + N T +I + ++ + A ++M G+ P +++++
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
L+ G CN G + AL + + ++ P++ T+N +I G CK GK+ + + +F + +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
V PN VTY T+++G+ + G E LF EM PD TYN LI +DG +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAF 391
A L++E+ V +AST L+T +++F
Sbjct: 591 AELIREMRSCRFVGDASTI-GLVTNMLHDGRLDKSF 625
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%)
Query: 318 ETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSAL 377
+ + LF +M +++ P I+ ++ L+ + K K +L +++ + N T+S L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 378 ITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSM 437
I C R+ A + M +GY P+ T L++ FC AV ++ M++
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 438 TPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
PDS + L +GL R R A+ L M K P+
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD 220
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%)
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMT 398
Y + + D K A NL ++ K P+ FS L++ N + + M
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 399 SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKR 458
++G S N T+ +LI+ FC+ A+ VL M+ PD L++L NG R
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 459 LALELCSEMEAKRLLPEGF 477
A+ L +M P+ F
Sbjct: 169 DAVSLVGQMVEMGYQPDSF 187
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 182/350 (52%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
++ +++ V + + DA + F M G P + + ++ +S L R A
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
+M I+PNV T N +I A+ K G L A + ++M + P +V++N+LI+G+C
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
L A ++ +LM + P+VVT+NTLINGFCK K+ + +F +M + NTV
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
TY TLI+G+ Q +C+ +F++M + V P+I+TYN L+ GLCK+GK +KA + + L
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
K + P+ T++ + G C E + ++ S++ G P+ + +IS FCK
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 423 DGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
+ A + M + PDSG + L R G K + EL EM + R
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 203/423 (47%), Gaps = 17/423 (4%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSYRLCDSSP 126
SH L T++I+++ L + A +IL +++ + S N+L + R+ ++
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 127 LVFDAVFKTYA--------------NLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
LV V Y NK +A RM G P L + A ++ L
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 173 QLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVV 232
+ ++AL +M + I +V + VI + CK + AL +M + G+ P V
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
++++LIS CN G A ++ S M +++PNVVTFN+LI+ F KEGKL EA ++F EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
++ PN VTYN+LING+ + ++F M PD++TYN LI G CK K
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
L +++ + LV N T++ LI G ++ + A +++ M S G PN T+ L
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
+ CKN + A+ V + M PD + + G+ + G+ +L + K +
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 473 LPE 475
P+
Sbjct: 517 KPD 519
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 169/335 (50%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
KL +A F M + P++ + LS++ ++++ ++ ++F +M +S N+YT N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++I C+ L AL L KM +G P++V+ N+L++G+C+ + A+ + M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
P+ VTF TL++G + K EA + M V P+ VTY +ING + G +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+ L +M + +++ D++ Y+ +I LCK A NL E+D + P+ T+S+LI+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C A ++ M +PN TF LI F K A ++ +M+ RS+ P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
++L NG R A ++ + M +K LP+
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 166/340 (48%), Gaps = 4/340 (1%)
Query: 91 TAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFL 150
T S++ + N S ++ L +L R + + + F+++ +A KL +A F
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDML--ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 151 RMKEYGFLPTLESCNAFLSSL-LQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKS 209
M + P + + N+ ++ + R E F + +DC+ P+V T N +I +CK+
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTLINGFCKA 393
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF 269
+ +E M GL V++ LI G+ A + M + V PN++T+
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
NTL++G CK GKL +A VF ++ + + P+ TYN + G + G E G LF +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
VKPD++ YN +I G CK G ++A L ++ +D +P++ T++ LI +
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 390 AFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
+ ++ + M S ++ + ST+G++ + G ++VL
Sbjct: 574 SAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVL 613
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 159/336 (47%), Gaps = 22/336 (6%)
Query: 75 THSILLHTLANNRKFKTAH----SILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFD 130
T+S L+ L N ++ A +L R IN NV + N+L DA +L ++ L FD
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF-NSLIDAFAKEGKLIEAEKL-FD 334
Query: 131 AVFK--------TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLR 175
+ + TY +L ++L +A F M LP + + N ++ + +
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
+ + +R+M R + N T +I + ++ D A ++M G+ P ++++N
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
L+ G C G L A+ + + ++ P++ T+N + G CK GK+ + + +F + +
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
V P+ + YNT+I+G+ + G E LF +M + PD TYN LI +DG +
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 574
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAF 391
A L+KE+ +AST+ L+T ++ F
Sbjct: 575 AELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKGF 609
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%)
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
R P++V F+ L++ K K +M++ V+ N TYN +IN +
Sbjct: 60 RPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFA 119
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+ + +M + P I+T N+L+ G C + +A LV ++ + P+ TF+ L+ G
Sbjct: 120 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
N + A + M G P+ T+G +I+ CK + D A+ +L M + D
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
I S + + L + AL L +EM+ K + P+ F
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 199/408 (48%), Gaps = 27/408 (6%)
Query: 65 NCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSYRL 121
C P L T+ +++ L A S+L+++ + + NT+ D L C Y+
Sbjct: 218 GCQPD---LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL-CKYKH 273
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
D DA + F M G P + + ++ +S L R A
Sbjct: 274 MD--------------------DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+M I+PNV T + +I A+ K G L A + ++M + P + ++++LI+G+
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C L A M LM + PNVVT++TLI GFCK ++ E +F EM + NT
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
VTY TLI+G+ Q +C+ +F++M V P+ILTYN L+ GLCK+GK KA + +
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
L + + P+ T++ +I G C E ++++ +++ G SPN + +IS FC+
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
+ A +L+ M + P+SG + L R G + + EL EM +
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 207/423 (48%), Gaps = 19/423 (4%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY----RLCDSS 125
SH L T+SI ++ + A ++L +++ + TL +LL Y R+ D+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL-SSLLNGYCHSKRISDAV 173
Query: 126 PLVFDAV---FK----TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSL 171
LV V +K T+ L NK +A +M + G P L + ++ L
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 172 LQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
+ ++AL+ ++M + I +V N +I CK + AL +M + G+ P V
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 232 VSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
++++LIS CN G A ++ S M +++PNVVTF+ LI+ F KEGKL EA +++ E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
M ++ P+ TY++LING+ + +FE M P+++TY+ LI G CK +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 352 TKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGM 411
++ L +E+ + LV N T++ LI G + + A +++ M S+G PN T+ +
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 412 LISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR 471
L+ CKN A+ V + +M PD + + G+ + G+ EL + K
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 472 LLP 474
+ P
Sbjct: 534 VSP 536
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 168/338 (49%)
Query: 137 ANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
+++ K+ DA F M + P++ N LS++ ++ + E+ ++ +M+ IS ++
Sbjct: 59 SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
YT ++ I +C+ L AL L KM +G P +V+ ++L++GYC+ + A+ +
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M P+ TF TLI+G K EA + +M P+ VTY T++NG + G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+ + L ++M + +++ D++ YN +I GLCK A NL E+D + P+ T+S+
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
LI+ C A ++ M +PN TF LI F K A ++ +M+ RS
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ PD S+L NG R A + M +K P
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 154/302 (50%)
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
+ + A+ + +M + P++ N ++ A K + E+M+ +G+S + +++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
I+ +C + L LAL + + M P++VT ++L+NG+C ++ +A + +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
P+T T+ TLI+G + L ++M + +PD++TY ++ GLCK G A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV 415
+L+K+++K + + ++ +I G C + + A ++ M + G P+ T+ LIS
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 416 FCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
C + A ++L DM++R + P+ SAL + + G+ A +L EM + + P+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 476 GF 477
F
Sbjct: 363 IF 364
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 164/336 (48%), Gaps = 22/336 (6%)
Query: 75 THSILLHTLANNRKFKTAHSIL----RRIINVNVASSSNTLFDALLCSYRLCDSSPLVFD 130
T+S L+ L N ++ A +L R IN NV + S L DA + +L ++ L +D
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS-ALIDAFVKEGKLVEAEKL-YD 352
Query: 131 AVFK--------TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLR 175
+ K TY++L ++L +A H F M P + + + + + +
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
R E + +REM + + N T +I + ++ D A ++M +G+ P ++++N
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
L+ G C G L A+ + + + P++ T+N +I G CK GK+ + + +F + +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
V+PN + YNT+I+G+ + G+ E L ++M + P+ TYN LI +DG + +
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAF 391
A L+KE+ +AST L+T +++F
Sbjct: 593 AELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKSF 627
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
P V +F L C E A + E+ L N S I + + L
Sbjct: 25 PTVPSFFNLCGSGCWERSFASASGDYREI--------------LRNRLSDIIKVDDAVDL 70
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
F +M +++ P I+ +N L+ + K K + +L +++ + + T+S I C
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
R+ A + M +GY P+ T L++ +C ++ AV ++ M++ PD+
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 444 LSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ L +GL + A+ L +M + P+
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 193/421 (45%), Gaps = 24/421 (5%)
Query: 55 LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDA 114
L+L FF + N N HT T +++ LA + + + +L+++
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQM-----------KLQG 106
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
CS L F +V Y + A F R+KE+G P+++ N L +LL
Sbjct: 107 FHCSEDL-------FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGE 159
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
R ++ YR+M+RD PNV+T N+++ A CK+ + A + L +M + G P VS+
Sbjct: 160 NRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSY 219
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
+IS C GL+ ++ R P V +N LING CKE A+ + EM
Sbjct: 220 TTVISSMCEVGLVKEGRELAE-----RFEPVVSVYNALINGLCKEHDYKGAFELMREMVE 274
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
++PN ++Y+TLIN G E +M + P+I T ++L+ G G T
Sbjct: 275 KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD 334
Query: 355 AANLVKELDKD-NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
A +L ++ + L PN ++ L+ G C N +A ++ M IG SPN T+G LI
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
+ F K DGAV + ML P+ + + + L R + + A L M +
Sbjct: 395 NGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 474 P 474
P
Sbjct: 455 P 455
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 198/452 (43%), Gaps = 53/452 (11%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVA--SSSNTLFDALLCSYRLCDSS------- 125
T+++LL L N K A +L + N + S T + +C L
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF 242
Query: 126 -PLV--FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
P+V ++A+ + + A M E G P + S + ++ L + E+A +
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM-KDMGLSPTVVSFNALISGY 241
F +M + PN+YTL+ ++ G AL+ +M + GL P VV++N L+ G+
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C+ G + A+ + S M SPN+ T+ +LINGF K G L A ++++M + PN
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 302 V-----------------------------------TYNTLINGYSQIGNCETGMRLFEE 326
V T+N I G G + ++F +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 327 M-GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRN 385
M +++ P+I+TYN L+ GL K + ++A L +E+ + ++ST++ L+ G C
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 386 NSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD---RSMTPDSG 442
A Q+ M G SP+E T M+I +CK + A Q+L D++ R PD
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVI 601
Query: 443 ILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ + GL R + + L M + ++P
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 21/363 (5%)
Query: 75 THSILLHTLANNRKFKTAHSILRRII------NVNVASS-------SNTLFDALLCSYRL 121
++S L++ L N+ + + A S L +++ N+ SS T FDAL ++
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 122 C-----DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRR 176
+ + ++ + + + + + A F M+E G P + + + ++ +
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 177 AEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNA 236
+ A+ + +M PNV ++ A C+ A +E M +P+V +FNA
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Query: 237 LISGYCNKGLLGLALKM-KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
I G C+ G L A K+ + + +R PN+VT+N L++G K ++ EAY + E+ +
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
V ++ TYNTL++G G ++L +M + PD +T N +IL CK GK ++A
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Query: 356 ANLVKELD--KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
A ++ + + P+ +++ +I G C N E + M S G P+ +T+ +LI
Sbjct: 583 AQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Query: 414 SVF 416
+ F
Sbjct: 643 NCF 645
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 191/381 (50%), Gaps = 29/381 (7%)
Query: 66 CNPSSHTLQTHSILLHTLANNRKFKTAHSILRRI----INVNVASSSNTLFDALLCSYRL 121
C P+ L T+ ++++ L A ++L ++ I NV S T+ D+L C YR
Sbjct: 221 CQPN---LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS-TVIDSL-CKYRH 275
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
D DA + F M+ G P + + ++ +S L R A
Sbjct: 276 ED--------------------DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+M I+PNV T N +I A+ K G L A + ++M + P + ++++LI+G+
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C L A M LM + PNVVT+NTLINGFCK ++ E +F EM + NT
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
VTY TLI+G+ Q +C+ +F++M + V P+I+TYN L+ GLCK+GK +KA + +
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
L + + P T++ +I G C E + ++ S++ G P+ + +IS FC+
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 422 FDGAVQVLRDMLDRSMTPDSG 442
+ A + R M + PDSG
Sbjct: 556 KEEADALFRKMREDGPLPDSG 576
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 204/426 (47%), Gaps = 23/426 (5%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY----RLCDSS 125
SH L T++IL++ + A ++L +++ + S TL +LL Y R+ D+
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL-SSLLNGYCHGKRISDAV 175
Query: 126 PLVFDAVFK-------TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSL 171
LV V T+ L NK +A RM + G P L + ++ L
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 172 LQLRRAEVALAF--YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSP 229
+R ++ LAF +M I NV + VI + CK AL +M++ G+ P
Sbjct: 236 C--KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 230 TVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF 289
V+++++LIS CN A ++ S M +++PNVVTFN LI+ F KEGKL EA +++
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 290 SEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKD 349
EM ++ P+ TY++LING+ + +FE M P+++TYN LI G CK
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 350 GKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
+ + L +E+ + LV N T++ LI G + + A +++ M S G PN T+
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
L+ CKN + A+ V + M P + + G+ + G+ +L +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 470 KRLLPE 475
K + P+
Sbjct: 534 KGVKPD 539
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 165/334 (49%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
KL DA F M + LP++ N LS++ ++++ ++ ++ +M+R IS N+YT N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++I +C+ + AL L KM +G P++V+ ++L++GYC+ + A+ + M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
P+ +TF TLI+G K EA + M PN VTY ++NG + G+ +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
L +M +++ +++ Y+ +I LCK A NL E++ + PN T+S+LI+
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C A ++ M +PN TF LI F K A ++ +M+ RS+ PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
S+L NG R A + M +K P
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 150/298 (50%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A+ + M + P+++ N ++ A K + EKM+ +G+S + ++N LI+
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
+C + + LAL + M P++VT ++L+NG+C ++ +A + +M P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+T+T+ TLI+G + L + M + +P+++TY ++ GLCK G A NL+
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
+++ + N +S +I C + + A ++ M + G PN T+ LIS C
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
E + A ++L DM++R + P+ +AL + + G+ A +L EM + + P+ F
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 135/306 (44%), Gaps = 59/306 (19%)
Query: 52 DDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSIL----RRIINVNVASS 107
DD L+L F + N + + T+S L+ L N ++ A +L R IN NV +
Sbjct: 277 DDALNL--FTEMENKGVRPNVI-TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF 333
Query: 108 SNTLFDALLCSYRLCDSSPLVFDAVFK--------TYANL-------NKLRDATHTFLRM 152
N L DA + +L ++ L +D + K TY++L ++L +A H F M
Sbjct: 334 -NALIDAFVKEGKLVEAEKL-YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 153 KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR---------------------RDC 191
P + + N ++ + +R + + +REM RDC
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 192 --------------ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
+ PN+ T N ++ CK+G L +A+ E ++ + PT+ ++N +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
I G C G + + + V P+V+ +NT+I+GFC++G EA +F +M+
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 298 APNTVT 303
P++ T
Sbjct: 572 LPDSGT 577
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 173/335 (51%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
+ DA F M LP++ L++ LRR E + F ++M IS ++Y+
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++I +C+ L AL L KM +G P++V+F +L+ G+C +G A + LM
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
PNVV +NTLI+G CK G+L+ A + +EM+ + + VTYNTL+ G G
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
R+ +M + + PD++T+ ALI K G +A L KE+ + ++ PN T++++I G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C+ A + + M S G PN T+ LIS FCK D +++ + M D
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ L +G + G+ R+AL++ M ++R+ P+
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 184/404 (45%), Gaps = 18/404 (4%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVF 129
SH L + +IL+H + A S+L +++ + + S + F
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGY------------------EPSIVTF 144
Query: 130 DAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRR 189
++ + +N++ DA + M + G+ P + N + L + +AL EM +
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204
Query: 190 DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGL 249
+ +V T N ++ C SG A L M ++P VV+F ALI + +G L
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Query: 250 ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
A ++ M V PN VT+N++ING C G+L++A + F M PN VTYNTLI+
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
Query: 310 GYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP 369
G+ + + GM+LF+ M DI TYN LI G C+ GK + A ++ + + P
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Query: 370 NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
+ T L+ G CV E A + M + ++I CK + + A ++
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Query: 430 RDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
+ + PD+ + + GL + G +R A EL M+ + ++
Sbjct: 445 CRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 185/404 (45%), Gaps = 12/404 (2%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFK 134
HS L ++ + + TA + LRR V S L+ S+ L F +
Sbjct: 63 VHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGI---SHDLYS-----FTILIH 114
Query: 135 TYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISP 194
+ ++L A +M + G+ P++ + + L + R A + M + P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
NV N +I CK+G+L ALE L +M+ GL VV++N L++G C G A +M
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
M ++P+VVTF LI+ F K+G L EA ++ EM ++V PN VTYN++ING
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G + F+ M P+++TYN LI G CK + L + + + + T+
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD 434
+ LI G C A I+ M S +P+ T +L+ C N + + A+ DM
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM-- 412
Query: 435 RSMTPDSGILS--ALYNGLSRCGRKRLALELCSEMEAKRLLPEG 476
R GI++ + +GL + + A EL + + + P+
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%)
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
L GF + +A+ +F EM + P+ V + L+ + + ET + ++M
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 332 VKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAF 391
+ D+ ++ LI C+ + A +++ ++ K P+ TF +L+ G C+ N AF
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 392 QIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
+ M GY PN + LI CKN + + A+++L +M + + D + L GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 452 SRCGRKRLALELCSEMEAKRLLPE 475
GR A + +M + + P+
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPD 245
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 204/426 (47%), Gaps = 17/426 (3%)
Query: 67 NPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSYRLCD 123
N H + T +I+++ +K A S+L R + + +TL + R+ +
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 124 SSPLVFDAV-FKTYANL-------------NKLRDATHTFLRMKEYGFLPTLESCNAFLS 169
+ LV V K +L ++ +A RM EYGF P + L+
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 170 SLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSP 229
L + + +AL +R+M I +V ++VI + CK G AL +M+ G+
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 230 TVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF 289
VV++++LI G CN G KM M + P+VVTF+ LI+ F KEGKL EA ++
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 290 SEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKD 349
+EM +AP+T+TYN+LI+G+ + ++F+ M +PDI+TY+ LI CK
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 350 GKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
+ L +E+ L+PN T++ L+ G C A ++++ M S G P+ T+
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
G+L+ C N + + A+++ M MT GI + + +G+ + A L +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 470 KRLLPE 475
K + P+
Sbjct: 519 KGVKPD 524
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 157/317 (49%)
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
+S + + V + DA F M+ G + + ++ + L + +
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
REM I P+V T + +I + K G L A E +M G++P +++N+LI G+C
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
+ L A +M LM + P++VT++ LIN +CK ++ + R+F E+ + PNT+T
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
YNTL+ G+ Q G LF+EM V P ++TY L+ GLC +G+ KA + +++
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
K + ++ +I G C + + A+ ++ S++ G P+ T+ ++I CK
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 424 GAVQVLRDMLDRSMTPD 440
A + R M + TPD
Sbjct: 543 EADMLFRKMKEDGCTPD 559
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 173/369 (46%), Gaps = 35/369 (9%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
K+ DA F M + LPT N S++ + ++ ++ L F + M + I ++YT+
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++I YC+ L A L + +G P ++F+ L++G+C +G + A+ + M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN---- 316
+ P++VT +TLING C +G++ EA + M P+ VTY ++N + GN
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 317 --------------------------CETG-----MRLFEEMGRNQVKPDILTYNALILG 345
C+ G + LF EM +K D++TY++LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 346 LCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
LC DGK A +++E+ N++P+ TFSALI A ++Y M + G +P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 406 ESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCS 465
T+ LI FCK A Q+ M+ + PD S L N + R + L
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 466 EMEAKRLLP 474
E+ +K L+P
Sbjct: 410 EISSKGLIP 418
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 180/398 (45%), Gaps = 19/398 (4%)
Query: 55 LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDA 114
L+L+ F + N + +Q +SI++ +L + F A S+ + + + T
Sbjct: 228 LALDLFRKMEERNIKASVVQ-YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT---- 282
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
+ ++ N K D M +P + + +A + ++
Sbjct: 283 --------------YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
+ A Y EM I+P+ T N +I +CK L A + + M G P +V++
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
+ LI+ YC + +++ + + + PN +T+NTL+ GFC+ GKL+ A +F EM
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
V P+ VTY L++G G + +FE+M ++++ I YN +I G+C K
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
A +L L + P+ T++ +I G C + + A ++R M G +P++ T+ +LI
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLS 452
+V+++ +M + DS + + + LS
Sbjct: 569 AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 205/427 (48%), Gaps = 23/427 (5%)
Query: 13 DFVNIAHSHLIHSQWENLHPLSTS-LTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSH 71
D V+I H S+W L L S TP + I L L+N+ LSL FF + + SH
Sbjct: 44 DAVSILTHHRSKSRWSTLRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSH 103
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSN----TLFDALLCSYRLCDSSPL 127
+ S L+H L+ +R A I+R + + +F +L+ SY C S+P
Sbjct: 104 DTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPF 163
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
VFD + K+ + ++ A +++ G + +CNA ++ + + R A YRE+
Sbjct: 164 VFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREV 223
Query: 188 -------------RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD-MGLSPTVVS 233
I PN T N ++ ++ + G+ +M++ +G SP V S
Sbjct: 224 FGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS 283
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
+N L+ YC +GL+ A K+ M V ++V +NT+I G C ++ +A +F +M
Sbjct: 284 YNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMG 343
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
+ + +TY L+NGY + G+ ++G+ ++ EM R + D LT AL+ GLC D +
Sbjct: 344 LKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQ 403
Query: 354 K---AANLVKELDKDNLV-PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
+ AA++VK+ ++ + P+ + + L+ C +RA I M G+ P++ T+
Sbjct: 404 RVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETY 463
Query: 410 GMLISVF 416
I +
Sbjct: 464 RAFIDGY 470
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 4/213 (1%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C + ++ + + Y + +A + MK G + + + N + L A
Sbjct: 277 CSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAK 336
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+R+M I T ++ YCK+GD+ L +MK G ++ AL+ G
Sbjct: 337 ELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGL 396
Query: 242 CN----KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
C+ + ++ A +K + P+ + L+ C++GK+ A + +EM
Sbjct: 397 CDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGF 456
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
P+ TY I+GY +G+ ET L EM +
Sbjct: 457 KPSQETYRAFIDGYGIVGDEETSALLAIEMAES 489
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 228/455 (50%), Gaps = 3/455 (0%)
Query: 22 LIHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLH 81
L+ ++E LH LS + + IL +L+ + LE FN + + ++H
Sbjct: 53 LVLGRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVH 112
Query: 82 TLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNK 141
L+ R ++ S L ++ +N S ++ L+ ++ SP VFD + K YA
Sbjct: 113 ILSRARNYQQTKSYLCELVALN--HSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGL 170
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNM 201
+++A H F M YG +P+L SCN+ LS+L++ VAL Y +M +SP+V+T ++
Sbjct: 171 VKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSI 230
Query: 202 VICAYCKSGDLPRALE-TLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
V+ AYC+SG++ +A+ E +GL VV++N+LI+GY G + ++ LM
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
VS NVVT+ +LI G+CK+G + EA VF +K + + Y L++GY + G
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+R+ + M V+ + N+LI G CK G+ +A + ++ +L P+ T++ L+ G
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDG 410
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C + A ++ M P T+ +L+ + + F + + + ML R + D
Sbjct: 411 YCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNAD 470
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
S L L + G A++L + A+ LL +
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 150/355 (42%)
Query: 116 LCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLR 175
L S R + + + ++ K Y + +A H F +KE + + +
Sbjct: 286 LMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTG 345
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
+ A+ + M + N N +I YCKSG L A + +M D L P ++N
Sbjct: 346 QIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYN 405
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
L+ GYC G + ALK+ M V P V+T+N L+ G+ + G H+ ++ M
Sbjct: 406 TLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR 465
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
V + ++ +TL+ ++G+ M+L+E + + D +T N +I GLCK K +A
Sbjct: 466 GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV 415
++ ++ P T+ AL G N + AF + M G P + LIS
Sbjct: 526 KEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG 585
Query: 416 FCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
K + ++ ++ R +TP AL G G A C EM K
Sbjct: 586 AFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK 640
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 140/319 (43%), Gaps = 39/319 (12%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C + + A+ Y + L++A M+ G PT+E N +S + R
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLS------------- 228
E+R ++P V T +I +C G + +A T +M + G++
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656
Query: 229 -------------PTVVSFNALISGYCN-KGLLGLA----LKMKSLMGNYRVS------- 263
+V F+ L+ GY + K L + LK + + + S
Sbjct: 657 FRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLV 716
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN-VAPNTVTYNTLINGYSQIGNCETGMR 322
PN + +N I G CK GKL +A ++FS++ ++ P+ TY LI+G + G+
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 323 LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC 382
L +EM + P+I+TYNALI GLCK G +A L+ +L + + PNA T++ LI G
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 383 VRNNSERAFQIYRSMTSIG 401
N A ++ M G
Sbjct: 837 KSGNVAEAMRLKEKMIEKG 855
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 161/350 (46%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
++ + Y ++RDA M E G CN+ ++ + + A + M
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
+ P+ +T N ++ YC++G + AL+ ++M + PTV+++N L+ GY G
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
L + +M V+ + ++ +TL+ K G +EA +++ + + +T+T N +
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
I+G ++ + + + + KP + TY AL G K G K+A + + +++ +
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 368 VPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQ 427
P ++ LI+G + + + + + G +P +T+G LI+ +C D A
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632
Query: 428 VLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+M+++ +T + I S + N L R + A L ++ LL G+
Sbjct: 633 TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGY 682
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 188/436 (43%), Gaps = 47/436 (10%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSI----LRRIINVNVASSSNTLFDALLCSYRLCD---- 123
T+ T++ILL + F S+ L+R +N + S S TL +AL ++L D
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCS-TLLEAL---FKLGDFNEA 490
Query: 124 -------------SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSS 170
+ + + + + K+ +A + + P +++ A
Sbjct: 491 MKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHG 550
Query: 171 LLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT 230
++ + A A M R I P + N +I K L + + + +++ GL+PT
Sbjct: 551 YYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610
Query: 231 VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS 290
V ++ ALI+G+CN G++ A M ++ NV + + N + K+ EA +
Sbjct: 611 VATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQ 670
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGN--------CETGMRLFEEMGRNQVK----PDILT 338
++ V ++ L+ GY + C ++ E + + K P+ +
Sbjct: 671 KI---------VDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIV 721
Query: 339 YNALILGLCKDGKTKKAANLVKEL-DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
YN I GLCK GK + A L +L D +P+ T++ LI G + + +AF + M
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
G PN T+ LI CK + D A ++L + + +TP++ + L +GL + G
Sbjct: 782 ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNV 841
Query: 458 RLALELCSEMEAKRLL 473
A+ L +M K L+
Sbjct: 842 AEAMRLKEKMIEKGLV 857
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 144/328 (43%), Gaps = 26/328 (7%)
Query: 63 VHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDA-------- 114
+ C P+ T Q S + + N ++ + R NTL
Sbjct: 534 IFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN 593
Query: 115 ----LLCSYRLCDSSPLV--FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFL 168
L+ R +P V + A+ + N+ + A T M E G + C+
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 653
Query: 169 SSLLQLRRA-EVALAFYREMRRDCISPNVYTLNMVICAYC----KSGDLPRALE--TLEK 221
+SL +L + E L + + D + P +L + A K+ + ++E T +K
Sbjct: 654 NSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKK 713
Query: 222 MKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS-LMGNYRVSPNVVTFNTLINGFCKEG 280
+ L P + +N I+G C G L A K+ S L+ + R P+ T+ LI+G G
Sbjct: 714 L----LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAG 769
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
+++A+ + EM + + PN VTYN LI G ++GN + RL ++ + + P+ +TYN
Sbjct: 770 DINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYN 829
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLV 368
LI GL K G +A L +++ + LV
Sbjct: 830 TLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 196/411 (47%), Gaps = 18/411 (4%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVF 129
S + T++ +L +L ++ K K A +L R++ R C + +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ------------------RDCYPDVITY 242
Query: 130 DAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRR 189
+ + + + A M++ G P + + N ++ + + R + A+ F +M
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 190 DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGL 249
PNV T N+++ + C +G A + L M G SP+VV+FN LI+ C KGLLG
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 250 ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
A+ + M + PN +++N L++GFCKE K+ A M P+ VTYNT++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 310 GYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP 369
+ G E + + ++ P ++TYN +I GL K GKT KA L+ E+ +L P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 370 NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
+ T+S+L+ G + A + + +G PN TF ++ CK+ D A+ L
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 430 RDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQE 480
M++R P+ + L GL+ G + ALEL +E+ K L+ + ++
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQ 593
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 177/344 (51%), Gaps = 3/344 (0%)
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+ + + L K R A ++ G +P + + N +S + AL+ M
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS--- 199
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
+SP+V T N ++ + C SG L +A+E L++M P V+++ LI C +G A+
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
K+ M + +P+VVT+N L+NG CKEG+L EA + ++M + PN +T+N ++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
G +L +M R P ++T+N LI LC+ G +A ++++++ + PN+
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
+++ L+ G C +RA + M S G P+ T+ +++ CK+ + AV++L
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ + +P + + +GL++ G+ A++L EM AK L P+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 178/349 (51%), Gaps = 5/349 (1%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY-R 185
+ ++ + Y ++ +A RM P + + N L SL + + A+ R
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
++RDC P+V T ++I A C+ + A++ L++M+D G +P VV++N L++G C +G
Sbjct: 230 MLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
L A+K + M + PNV+T N ++ C G+ +A ++ ++M +P+ VT+N
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
LIN + G + + E+M ++ +P+ L+YN L+ G CK+ K +A ++ +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
P+ T++ ++T C E A +I ++S G SP T+ +I K A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+++L +M + + PD+ S+L GLSR G+ A++ E E + P
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 150/318 (47%), Gaps = 4/318 (1%)
Query: 158 LPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALE 217
L +ES N L +++ E F M P++ +I +C+ G +A +
Sbjct: 100 LEDVES-NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAK 158
Query: 218 TLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFC 277
LE ++ G P V+++N +ISGYC G + AL S++ VSP+VVT+NT++ C
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNAL---SVLDRMSVSPDVVTYNTILRSLC 215
Query: 278 KEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDIL 337
GKL +A V M + P+ +TY LI + M+L +EM PD++
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 338 TYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
TYN L+ G+CK+G+ +A + ++ PN T + ++ C A ++ M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
G+SP+ TF +LI+ C+ A+ +L M P+S + L +G + +
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 458 RLALELCSEMEAKRLLPE 475
A+E M ++ P+
Sbjct: 396 DRAIEYLERMVSRGCYPD 413
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 8/254 (3%)
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
K++ GL+ F L SGY N G + N + V N + + G
Sbjct: 62 KVESSGLNGRAQKFETLSSGYSNSNGNGHYSSV-----NSSFALEDVESNNHLRQMVRTG 116
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
+L E ++ M P+ + TLI G+ ++G ++ E + + PD++TYN
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
+I G CK G+ A ++ LD+ ++ P+ T++ ++ C ++A ++ M
Sbjct: 177 VMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
P+ T+ +LI C++ A+++L +M DR TPD + L NG+ + GR A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 461 LELCSEMEAKRLLP 474
++ ++M + P
Sbjct: 294 IKFLNDMPSSGCQP 307
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 3/181 (1%)
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
++ A V N + + G E G + E M + PDI+ LI G C+ GKT+K
Sbjct: 96 SSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRK 155
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
AA +++ L+ VP+ T++ +I+G C A + M+ SP+ T+ ++
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILR 212
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
C + A++VL ML R PD + L R A++L EM + P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 475 E 475
+
Sbjct: 273 D 273
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 211/426 (49%), Gaps = 22/426 (5%)
Query: 31 HPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFK 90
PL + + +V + K KN D L + F+ + C H L +++I+++ L +F
Sbjct: 64 RPLPSIVDFSKVLSKIAKSKNYD-LVISLFHHMEVCGIG-HDLYSYNIVINCLCRCSRFV 121
Query: 91 TAHSILRRIIN-------VNVAS------SSNTLFDALLCSYRLCD----SSPLVFDAVF 133
A S++ +++ V V+S N +FDA+ ++ + ++++ +
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 181
Query: 134 KTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCIS 193
+ + DA F RM+ G + N+ ++ L R A R+M I
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
PNV T VI + K G A++ E+M + P V ++N+LI+G C G + A +M
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
LM P+VVT+NTLINGFCK ++ E ++F EM + +T+TYNT+I GY Q
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
G + +F M +P+I TY+ L+ GLC + + +KA L + + K + + +T
Sbjct: 362 AGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT 418
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
++ +I G C N E A+ ++RS++ G P+ ++ +IS FC+ +D + + R M
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Query: 434 DRSMTP 439
+ + P
Sbjct: 479 EDGLLP 484
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 191/382 (50%), Gaps = 11/382 (2%)
Query: 96 LRRIINVNVASSSNTLFDALLCSYRLCDSSPLV-------FDAVFKTYANLNKLRDATHT 148
+RR +++AS +N + L L +P++ + F T + L +
Sbjct: 1 MRRSTTISIASKANKFLNLCL----LQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDL 56
Query: 149 FLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK 208
F +M + LP++ + LS + + + ++ ++ + M I ++Y+ N+VI C+
Sbjct: 57 FCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCR 116
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVT 268
AL + KM G P VV+ ++LI+G+C + A+ + S M P+VV
Sbjct: 117 CSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI 176
Query: 269 FNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMG 328
+NT+I+G CK G +++A +F M+ V + VTYN+L+ G G RL +M
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 329 RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE 388
+ P+++T+ A+I K+GK +A L +E+ + + P+ T+++LI G C+ +
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 389 RAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALY 448
A Q+ M + G P+ T+ LI+ FCK++ D ++ R+M R + D+ + +
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 449 NGLSRCGRKRLALELCSEMEAK 470
G + GR A E+ S M+++
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSR 378
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 168/359 (46%), Gaps = 32/359 (8%)
Query: 149 FLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK 208
F M+ G L S N ++ L + R +AL+ +M + P+V T++ +I +C+
Sbjct: 92 FHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ 151
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVT 268
+ A++ + KM++MG P VV +N +I G C GL+ A+++ M V + VT
Sbjct: 152 GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVT 211
Query: 269 FNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMG 328
+N+L+ G C G+ +A R+ +M + ++ PN +T+ +I+ + + G M+L+EEM
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 329 RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE 388
R V PD+ TYN+LI GLC G+ +A ++ + +P+ T++ LI G C +
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 389 RAFQIYRSMTSIGY--------------------------------SPNESTFGMLISVF 416
+++R M G PN T+ +L+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGL 391
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
C N + A+ + +M + D + + +G+ + G A +L + K L P+
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 143/282 (50%)
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
P++ + V+ KS + + M+ G+ + S+N +I+ C +AL +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
M + P+VVT ++LINGFC+ ++ +A + S+M+ P+ V YNT+I+G +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
IG + LF+ M R+ V+ D +TYN+L+ GLC G+ AA L++++ ++VPN T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
F+A+I A ++Y MT P+ T+ LI+ C + D A Q+L M+
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 434 DRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ PD + L NG + R +L EM + L+ +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 106/221 (47%)
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M R P++V F+ +++ K +F M+V + + +YN +IN +
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+ + +M + +PD++T ++LI G C+ + A +LV ++++ P+ ++
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
+I G C A +++ M G + T+ L++ C + + A +++RDM+ R
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ P+ +A+ + + G+ A++L EM + + P+ F
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 199/414 (48%), Gaps = 18/414 (4%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSYRLCDSSP 126
+H++ T SI+++ RK A S + +I+ + + NTL + L R+ ++
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179
Query: 127 LVFDAVF----KTYANLN----------KLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
LV V T LN K+ DA RM E GF P + L+ +
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239
Query: 173 QLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVV 232
+ + +A+ R+M I + +++I CK G L A +M+ G ++
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
++N LI G+CN G K+ M ++SPNVVTF+ LI+ F KEGKL EA ++ EM
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
+APNT+TYN+LI+G+ + E +++ + M PDI+T+N LI G CK +
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
L +E+ ++ N T++ L+ G C E A ++++ M S P+ ++ +L
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL-CS 465
+ C N + + A+++ + M D GI + +G+ + A +L CS
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 163/299 (54%)
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNM 201
L +A + F M+ GF + + N + R + R+M + ISPNV T ++
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYR 261
+I ++ K G L A + L++M G++P +++N+LI G+C + L A++M LM +
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGM 321
P+++TFN LING+CK ++ + +F EM + V NTVTYNTL+ G+ Q G E
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 322 RLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQ 381
+LF+EM +V+PDI++Y L+ GLC +G+ +KA + +++K + + + +I G
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 382 CVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C + + A+ ++ S+ G + + ++IS C+ + A + R M + PD
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPD 577
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 211/430 (49%), Gaps = 21/430 (4%)
Query: 46 LLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVA 105
L+ +K DD +++ F + P + + L +A ++++ ++ +++ + +A
Sbjct: 64 LVGIKADD--AVDLFRDMIQSRPLPTVIDFNR-LFSAIAKTKQYELVLALCKQMESKGIA 120
Query: 106 SSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCN 165
S TL + C + KL A T ++ + G+ P N
Sbjct: 121 HSIYTLSIMINC------------------FCRCRKLSYAFSTMGKIMKLGYEPDTVIFN 162
Query: 166 AFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDM 225
L+ L R AL M P + TLN ++ C +G + A+ +++M +
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET 222
Query: 226 GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
G P V++ +++ C G LA+++ M + + V ++ +I+G CK+G L A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
+ +F+EM++ + +TYNTLI G+ G + G +L +M + ++ P+++T++ LI
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 346 LCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
K+GK ++A L+KE+ + + PN T+++LI G C N E A Q+ M S G P+
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 406 ESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCS 465
TF +LI+ +CK D +++ R+M R + ++ + L G + G+ +A +L
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 466 EMEAKRLLPE 475
EM ++R+ P+
Sbjct: 463 EMVSRRVRPD 472
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 162/326 (49%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ ++ + + N + D M + P + + + + S ++ + A +E
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M + I+PN T N +I +CK L A++ ++ M G P +++FN LI+GYC
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ L++ M V N VT+NTL+ GFC+ GKL A ++F EM V P+ V+Y
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
L++G G E + +F ++ +++++ DI Y +I G+C K A +L L
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ +A ++ +I+ C +++ +A ++R MT G++P+E T+ +LI ++D A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLS 452
+++ +M D + + N LS
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINMLS 624
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 178/371 (47%), Gaps = 34/371 (9%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
++ +A F++MK+ PT+ + + SL R AL +EM I PN++T
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++I + C +A E L +M + GL P V+++NALI+GYC +G++ A+ + LM +
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 261 RVSPN----------------------------------VVTFNTLINGFCKEGKLHEAY 286
++SPN VVT+N+LI+G C+ G AY
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGL 346
R+ S M + P+ TY ++I+ + E LF+ + + V P+++ Y ALI G
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 347 CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
CK GK +A +++++ N +PN+ TF+ALI G C + A + M IG P
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 407 STFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSE 466
ST +LI K+ DFD A + ML PD+ + R GR A ++ ++
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 467 MEAKRLLPEGF 477
M + P+ F
Sbjct: 663 MRENGVSPDLF 673
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 209/451 (46%), Gaps = 41/451 (9%)
Query: 17 IAHSHLIHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTH 76
+A++HLIH L + + +K+K+D+ C P T++T+
Sbjct: 289 VAYTHLIHG-------LCVARRIDEAMDLFVKMKDDE------------CFP---TVRTY 326
Query: 77 SILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTY 136
++L+ +L + + A ++++ + + + +T + + +
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT------------------YTVLIDSL 368
Query: 137 ANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
+ K A +M E G +P + + NA ++ + E A+ M +SPN
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
T N +I YCKS ++ +A+ L KM + + P VV++N+LI G C G A ++ SL
Sbjct: 429 RTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M + + P+ T+ ++I+ CK ++ EA +F ++ V PN V Y LI+GY + G
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+ + E+M P+ LT+NALI GLC DGK K+A L +++ K L P ST +
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
LI + + A+ ++ M S G P+ T+ I +C+ A ++ M +
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEM 467
++PD S+L G G+ A ++ M
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 209/470 (44%), Gaps = 34/470 (7%)
Query: 13 DFVNIAH---SHLIHSQWENLHPLSTSLTPFRVKHI--LLKLKNDDVLSLEFFNWVHNCN 67
D +++ H S L W L + ++ H+ L L D +L F +W+
Sbjct: 58 DSMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNP 117
Query: 68 PSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPL 127
H++ +++ LL L NN +F L + CDS
Sbjct: 118 RYKHSVYSYASLLTLLINN-------------------GYVGVVFKIRLLMIKSCDS--- 155
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
V DA++ +L + + F E + + N L+SL + + Y EM
Sbjct: 156 VGDALY--VLDLCRKMNKDERF----ELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEM 209
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
D + PN+YT N ++ YCK G++ A + + K+ + GL P ++ +LI GYC + L
Sbjct: 210 LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDL 269
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
A K+ + M N V + LI+G C ++ EA +F +MK P TY L
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
I + L +EM +KP+I TY LI LC K +KA L+ ++ + L
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 368 VPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQ 427
+PN T++ALI G C R E A + M S SPN T+ LI +CK+ + A+
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMG 448
Query: 428 VLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
VL ML+R + PD ++L +G R G A L S M + L+P+ +
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 197/432 (45%), Gaps = 38/432 (8%)
Query: 73 LQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY------------- 119
+ T+++L+ +L + KF+ A +L +++ + + T ++AL+ Y
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT-YNALINGYCKRGMIEDAVDVV 416
Query: 120 RLCDSSPL-----VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
L +S L ++ + K Y N + A +M E LP + + N+ + +
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
+ A M + P+ +T +I + CKS + A + + ++ G++P VV +
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
ALI GYC G + A M M + PN +TFN LI+G C +GKL EA + +M
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
+ P T LI+ + G+ + F++M + KPD TY I C++G+
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
A +++ ++ ++ + P+ T+S+LI G + AF + + M G P++ TF LI
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Query: 415 VFCKNE------------------DFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
+ + +FD V++L M++ S+TP++ L G+ G
Sbjct: 716 HLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGN 775
Query: 457 KRLALELCSEME 468
R+A ++ M+
Sbjct: 776 LRVAEKVFDHMQ 787
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 148/361 (40%), Gaps = 54/361 (14%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD 211
M + G +P + + + SL + +R E A + + + ++PNV +I YCK+G
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
+ A LEKM P ++FNALI G C G L A ++ M + P V T
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
LI+ K+G AY F +M + P+ TY T I Y + G + +M N
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 332 VKPDILTYNALILGLCKDGKTKKAANLVK------------------------------- 360
V PD+ TY++LI G G+T A +++K
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 361 ------------ELD----------KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMT 398
E D + ++ PNA ++ LI G C N A +++ M
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 399 -SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
+ G SP+E F L+S CK + + A +V+ DM+ P L GL + G K
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 458 R 458
Sbjct: 848 E 848
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 142/311 (45%), Gaps = 19/311 (6%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C + L F+A+ KL++AT +M + G PT+ + + LL+ + A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+ +++M P+ +T I YC+ G L A + + KM++ G+SP + ++++LI GY
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLIN---------------GFCKEGKLHE-- 284
+ G A + M + P+ TF +LI C + E
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 285 -AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ-VKPDILTYNAL 342
+ +M +V PN +Y LI G ++GN ++F+ M RN+ + P L +NAL
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 343 ILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
+ CK K +AA +V ++ +P + LI G + ER +++++ GY
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Query: 403 SPNESTFGMLI 413
+E + ++I
Sbjct: 863 YEDELAWKIII 873
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 137/328 (41%), Gaps = 37/328 (11%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
T+ T +IL+H L + F A+S +++++ ++T +
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT------------------YTT 642
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+TY +L DA +M+E G P L + ++ + L + A + MR
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 192 ISPNVYTLNMVI------------------CAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
P+ +T +I CA + +E LEKM + ++P S
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Query: 234 FNALISGYCNKGLLGLALKM-KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
+ LI G C G L +A K+ + N +SP+ + FN L++ CK K +EA +V +M
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
P + LI G + G E G +F+ + + D L + +I G+ K G
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882
Query: 353 KKAANLVKELDKDNLVPNASTFSALITG 380
+ L ++K+ ++ T+S LI G
Sbjct: 883 EAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 177/346 (51%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
F + K ++ + + + E+GF P + + + E A + EM
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
+ + N T ++I K+G + E EKM++ G+ P + ++N +++ C G
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
A ++ M VS N+VT+NTLI G C+E KL+EA +V +MK + PN +TYNTLI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
+G+ +G + L ++ + P ++TYN L+ G C+ G T AA +VKE+++ +
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
P+ T++ LI +N E+A Q+ SM +G P+ T+ +LI FC + A ++
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 429 LRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ M++++ P+ I + + G + G AL+L EME K L P
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 166/305 (54%)
Query: 143 RDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMV 202
+ + +M+E G P L + N ++ L + R + A + EMR +S N+ T N +
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 203 ICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRV 262
I C+ L A + +++MK G++P ++++N LI G+C G LG AL + + + +
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 263 SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMR 322
SP++VT+N L++GFC++G A ++ EM+ + P+ VTY LI+ +++ N E ++
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 323 LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC 382
L M + PD+ TY+ LI G C G+ +A+ L K + + N PN ++ +I G C
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 383 VRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSG 442
+S RA ++ + M +PN +++ +I V CK A +++ M+D + P +
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
Query: 443 ILSAL 447
ILS +
Sbjct: 550 ILSLI 554
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 196/390 (50%), Gaps = 5/390 (1%)
Query: 89 FKTAHSILRRIINVNVAS---SSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDA 145
F A S+L ++I+ + S +S++L L S + +++ + +Y L +
Sbjct: 55 FSHAQSLLLQVISGKIHSQFFTSSSLLHYLTES-ETSKTKFRLYEVIINSYVQSQSLNLS 113
Query: 146 THTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICA 205
F M + GF+P N L+ ++ +F+ E + + +VY+ ++I
Sbjct: 114 ISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVV-LDVYSFGILIKG 172
Query: 206 YCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPN 265
C++G++ ++ + L ++ + G SP VV + LI G C KG + A + MG + N
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 266 VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE 325
T+ LING K G + + ++ +M+ V PN TYN ++N + G + ++F+
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 326 EMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRN 385
EM V +I+TYN LI GLC++ K +A +V ++ D + PN T++ LI G C
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 386 NSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILS 445
+A + R + S G SP+ T+ +L+S FC+ D GA +++++M +R + P +
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412
Query: 446 ALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
L + +R A++L ME L+P+
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 161/300 (53%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
++ A F M + G + + ++ L + + Y +M+ D + PN+YT N
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
V+ CK G A + ++M++ G+S +V++N LI G C + L A K+ M +
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
++PN++T+NTLI+GFC GKL +A + ++K ++P+ VTYN L++G+ + G+
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
++ +EM +KP +TY LI + +KA L +++ LVP+ T+S LI G
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C++ A ++++SM PNE + +I +CK A+++L++M ++ + P+
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPN 512
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 141/272 (51%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
+ +DA F M+E G + + N + L + + A +M+ D I+PN+ T N
Sbjct: 283 RTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYN 342
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
+I +C G L +AL +K GLSP++V++N L+SG+C KG A KM M
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
+ P+ VT+ LI+ F + + +A ++ M+ + P+ TY+ LI+G+ G
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
RLF+ M +P+ + YN +ILG CK+G + +A L+KE+++ L PN +++ +I
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
C S+ A ++ M G P+ S ++
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 131/280 (46%), Gaps = 19/280 (6%)
Query: 73 LQTHSILLHTLANNRKFKTAHSIL----RRIINVNVASSSNTLFDALLCSYRLCDSSPLV 128
L T++ +++ L + + K A + R ++ N+ + NTL L +L +++ +V
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTY-NTLIGGLCREMKLNEANKVV 326
Query: 129 --------------FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
++ + + + KL A +K G P+L + N +S +
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
A +EM I P+ T ++I + +S ++ +A++ M+++GL P V ++
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
+ LI G+C KG + A ++ M PN V +NT+I G+CKEG + A ++ EM+
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKP 334
+APN +Y +I + + RL E+M + + P
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 176/354 (49%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
++ ++F+ + + + DA + F M+ G P + + ++ +S L R A
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
+M I+PN+ T N +I A+ K G A + + M + P + ++N+L++G+C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
L A +M M + P+VVT+NTLI GFCK ++ + +F EM + +TV
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
TY TLI G G+C+ ++F++M + V PDI+TY+ L+ GLC +GK +KA + +
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
K + + ++ +I G C + + ++ S++ G PN T+ +IS C
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 423 DGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEG 476
A +L+ M + P+SG + L R G K + EL EM + R + +
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 610
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 204/422 (48%), Gaps = 19/422 (4%)
Query: 71 HTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY----RLCDSSP 126
H L T++IL++ + A ++L +++ + S TL +LL Y R+ D+
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL-SSLLNGYCHGKRISDAVA 176
Query: 127 LVFDAVFK-------TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
LV V T+ L NK +A RM + G P L + ++ L
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 173 QLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVV 232
+ ++AL +M I +V N +I + CK + AL ++M+ G+ P VV
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
++++LIS C+ G A ++ S M +++PN+VTFN LI+ F KEGK EA +++ +M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
++ P+ TYN+L+NG+ + ++FE M PD++TYN LI G CK +
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
+ L +E+ LV + T++ LI G + + A ++++ M S G P+ T+ +L
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
+ C N + A++V M + D I + + G+ + G+ +L + K +
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 473 LP 474
P
Sbjct: 537 KP 538
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 168/335 (50%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
KL DA F M + LP++ N LS++ ++++ +V ++ +M+R I +YT N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++I +C+ + AL L KM +G P++V+ ++L++GYC+ + A+ + M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
P+ +TF TLI+G K EA + M PN VTY ++NG + G+ +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+ L +M +++ D++ +N +I LCK A NL KE++ + PN T+S+LI+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C A Q+ M +PN TF LI F K F A ++ DM+ RS+ PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
++L NG R A ++ M +K P+
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 187/405 (46%), Gaps = 22/405 (5%)
Query: 65 NCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSYRL 121
C P+ L T+ ++++ L A ++L ++ + + NT+ D+L C YR
Sbjct: 220 GCQPN---LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL-CKYRH 275
Query: 122 CDSSPLVFDAV--------FKTYANL-------NKLRDATHTFLRMKEYGFLPTLESCNA 166
D + +F + TY++L + DA+ M E P L + NA
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 167 FLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMG 226
+ + ++ + A Y +M + I P+++T N ++ +C L +A + E M
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 227 LSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
P VV++N LI G+C + ++ M + + + VT+ TLI G +G A
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGL 346
+VF +M V P+ +TY+ L++G G E + +F+ M ++++K DI Y +I G+
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 347 CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
CK GK +L L + PN T++ +I+G C + + A+ + + M G PN
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 407 STFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
T+ LI ++ D + +++R+M D+ + + N L
Sbjct: 576 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 166/325 (51%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+M + G+ P++ + ++ L+ +R A+A +M P+ T +I
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
A+ +++M G P +V++ +++G C +G LAL + + M ++ +VV FN
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
T+I+ CK + +A +F EM+ + PN VTY++LI+ G +L +M
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
++ P+++T+NALI K+GK +A L ++ K ++ P+ T+++L+ G C+ + ++A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
Q++ M S P+ T+ LI FCK++ + ++ R+M R + D+ + L G
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 451 LSRCGRKRLALELCSEMEAKRLLPE 475
L G A ++ +M + + P+
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPD 469
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 148/298 (49%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A+ + M + P++ N ++ A K + EKM+ + + + ++N LI+
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
+C + + LAL + M P++VT ++L+NG+C ++ +A + +M P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+T+T+ TLI+G + L + M + +P+++TY ++ GLCK G T A NL+
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
+++ + + F+ +I C + + A +++ M + G PN T+ LIS C
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ A Q+L DM+++ + P+ +AL + + G+ A +L +M + + P+ F
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 195/414 (47%), Gaps = 27/414 (6%)
Query: 66 CNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSYRLC 122
C P+ L T+ ++++ L A ++L ++ + + NT+ D+L C YR
Sbjct: 146 CQPN---LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL-CKYRHV 201
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
D DA + F M+ G P + + ++ +S L R A
Sbjct: 202 D--------------------DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
+M I+PN+ T N +I A+ K G A + + M + P + ++N+LI+G+C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
L A +M M + P++ T+NTLI GFCK ++ + +F EM + +TV
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
TY TLI G G+C+ ++F++M + V PDI+TY+ L+ GLC +GK +KA + +
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
K + + ++ +I G C + + ++ S++ G PN T+ +IS C
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 423 DGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEG 476
A +L+ M + PDSG + L R G K + EL EM + R + +
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 535
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 205/425 (48%), Gaps = 23/425 (5%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY----RLCDSS 125
SH L T++IL++ + A ++L +++ + S TL +LL Y R+ D+
Sbjct: 42 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL-SSLLNGYCHGKRISDAV 100
Query: 126 PLVFDAVFK-------TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSL 171
LV V T+ L NK +A RM + G P L + ++ L
Sbjct: 101 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
Query: 172 LQLRRAEVALAF--YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSP 229
+R ++ LAF +M I +V N +I + CK + AL ++M+ G+ P
Sbjct: 161 C--KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 230 TVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF 289
VV++++LIS C+ G A ++ S M +++PN+VTFN LI+ F KEGK EA ++
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 290 SEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKD 349
+M ++ P+ TYN+LING+ + ++FE M PD+ TYN LI G CK
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 350 GKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
+ + L +E+ LV + T++ LI G + + A ++++ M S G P+ T+
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
+L+ C N + A++V M + D I + + G+ + G+ +L +
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 470 KRLLP 474
K + P
Sbjct: 459 KGVKP 463
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 162/318 (50%)
Query: 158 LPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALE 217
LP++ N LS++ ++++ ++ ++ +M+R IS N+YT N++I +C+ + AL
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 218 TLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFC 277
L KM +G P++V+ ++L++GYC+ + A+ + M P+ +TF TLI+G
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 278 KEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDIL 337
K EA + M PN VTY ++NG + G+ + L +M +++ D++
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 338 TYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
+N +I LCK A NL KE++ + PN T+S+LI+ C A Q+ M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
+PN TF LI F K F A ++ DM+ RS+ PD ++L NG R
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 458 RLALELCSEMEAKRLLPE 475
A ++ M +K P+
Sbjct: 307 DKAKQMFEFMVSKDCFPD 324
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 166/325 (51%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+M + G+ P++ + ++ L+ +R A+A +M P+ T +I
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
A+ +++M G P +V++ +++G C +G + LA + + M ++ +VV FN
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
T+I+ CK + +A +F EM+ + PN VTY++LI+ G +L +M
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
++ P+++T+NALI K+GK +A L ++ K ++ P+ T+++LI G C+ + ++A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
Q++ M S P+ T+ LI FCK++ + ++ R+M R + D+ + L G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 451 LSRCGRKRLALELCSEMEAKRLLPE 475
L G A ++ +M + + P+
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPD 394
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 145/284 (51%)
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
P+++ N ++ A K + EKM+ +G+S + ++N LI+ +C + + LAL +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
M P++VT ++L+NG+C ++ +A + +M P+T+T+ TLI+G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
+ L + M + +P+++TY ++ GLCK G A NL+ +++ + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
F+ +I C + + A +++ M + G PN T+ LIS C + A Q+L DM+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 434 DRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
++ + P+ +AL + + G+ A +L +M + + P+ F
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%)
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M R P++ FN L++ K K + +M+ ++ N TYN LIN + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+ L +M + +P I+T ++L+ G C + A LV ++ + P+ TF+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
LI G + N + A + M G PN T+G++++ CK D D A +L M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ D I + + + L + AL L EME K + P
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 168/348 (48%), Gaps = 1/348 (0%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
F V + Y L A +M E+G + S N + + R E AL F +EM
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 189 -RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
+D P+ YT N ++ CK+G + A+E ++ M G P V ++N++ISG C G +
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
A+++ M SPN VT+NTLI+ CKE ++ EA + + + P+ T+N+L
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
I G N M LFEEM +PD TYN LI LC GK +A N++K+++
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 368 VPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQ 427
+ T++ LI G C N + A +I+ M G S N T+ LI CK+ + A Q
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 428 VLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
++ M+ PD ++L R G + A ++ M + P+
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 175/355 (49%), Gaps = 2/355 (0%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
D +++V L ++++A +M P + N +S+L + + E A
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
R + I P+V T N +I C + + A+E E+M+ G P ++N LI C
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
+KG L AL M M + +V+T+NTLI+GFCK K EA +F EM+V V+ N+V
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
TYNTLI+G + E +L ++M KPD TYN+L+ C+ G KKAA++V+ +
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
+ P+ T+ LI+G C E A ++ RS+ G + + +I +
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 423 DGAVQVLRDMLDR-SMTPDSGILSALYNGLSRCGRK-RLALELCSEMEAKRLLPE 475
A+ + R+ML++ PD+ ++ GL G R A++ E+ K +PE
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 178/350 (50%), Gaps = 4/350 (1%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLR--MKEYGFLPTLESCNAFLSSLLQLRRAEV 179
C+ F + ++YA +L+D + + + E+G P N L+ L+ ++
Sbjct: 114 CEMGTSTFLILIESYAQF-ELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
+ +M I P+V T N++I A C++ L A+ LE M GL P +F ++
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN-VA 298
GY +G L AL+++ M + S + V+ N +++GFCKEG++ +A EM +
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
P+ T+NTL+NG + G+ + + + + M + PD+ TYN++I GLCK G+ K+A +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 359 VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
+ ++ + PN T++ LI+ C N E A ++ R +TS G P+ TF LI C
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 419 NEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
+ A+++ +M + PD + L + L G+ AL + +ME
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 166/317 (52%), Gaps = 2/317 (0%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM-RRDCISPNVYTLNMVICAYCKSG 210
M + G+ P + + N+ +S L +L + A+ +M RDC SPN T N +I CK
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC-SPNTVTYNTLISTLCKEN 379
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
+ A E + G+ P V +FN+LI G C +A+++ M + P+ T+N
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
LI+ C +GKL EA + +M+++ A + +TYNTLI+G+ + +F+EM +
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
V + +TYN LI GLCK + + AA L+ ++ + P+ T+++L+T C + ++A
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
I ++MTS G P+ T+G LIS CK + A ++LR + + + + + G
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Query: 451 LSRCGRKRLALELCSEM 467
L R + A+ L EM
Sbjct: 620 LFRKRKTTEAINLFREM 636
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 191/385 (49%), Gaps = 9/385 (2%)
Query: 71 HTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFD 130
H ++ ++L + T +S++ + + + + D ++ R C + + ++
Sbjct: 313 HAIEIMDVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT--RDCSPNTVTYN 369
Query: 131 AVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD 190
+ T N++ +AT + G LP + + N+ + L R VA+ + EMR
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
P+ +T NM+I + C G L AL L++M+ G + +V+++N LI G+C A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
++ M + VS N VT+NTLI+G CK ++ +A ++ +M + P+ TYN+L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK--ELDKDNLV 368
+ + G+ + + + M N +PDI+TY LI GLCK G+ + A+ L++ ++ NL
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNES-TFGMLISVFCKNED-FDGAV 426
P+A ++ +I G + + A ++R M +P ++ ++ ++ C AV
Sbjct: 610 PHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAV 667
Query: 427 QVLRDMLDRSMTPDSGILSALYNGL 451
L ++L++ P+ L L GL
Sbjct: 668 DFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 105/255 (41%), Gaps = 48/255 (18%)
Query: 263 SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI-------- 314
SP + ++ + G + ++ +MK + T T+ LI Y+Q
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 315 ---------------------------GNCETGMRLFE----EMGRNQVKPDILTYNALI 343
GN ++L E +M +KPD+ T+N LI
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGN---SLKLVEISHAKMSVWGIKPDVSTFNVLI 196
Query: 344 LGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYS 403
LC+ + + A +++++ LVP+ TF+ ++ G + + A +I M G S
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS 256
Query: 404 PNESTFGMLISVFCKNEDFDGAVQVLRDMLDR-SMTPDSGILSALYNGLSRCGRKRLALE 462
+ + +++ FCK + A+ +++M ++ PD + L NGL + G + A+E
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 463 LCSEMEAKRLLPEGF 477
+ M L EG+
Sbjct: 317 IMDVM-----LQEGY 326
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 209/439 (47%), Gaps = 33/439 (7%)
Query: 52 DDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTL 111
D++L L F +PS + + L+ L K + A ++++R+++ V S L
Sbjct: 321 DEMLCLRF-------SPSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDFGV---SPNL 367
Query: 112 FDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL 171
F V++A+ + K +A F RM + G P + + +
Sbjct: 368 F---------------VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 172 LQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
+ + + AL+F EM + +VY N +I +CK GD+ A + +M + L PTV
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 232 VSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
V++ +L+ GYC+KG + AL++ M ++P++ TF TL++G + G + +A ++F+E
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
M NV PN VTYN +I GY + G+ +EM + PD +Y LI GLC G+
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 352 TKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGM 411
+A V L K N N ++ L+ G C E A + + M G + +G+
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 412 LISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR 471
LI K++D +L++M DR + PD I +++ + S+ G + A + M
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM---- 708
Query: 472 LLPEGFGQEKIAITSPENG 490
+ EG ++ T+ NG
Sbjct: 709 -INEGCVPNEVTYTAVING 726
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 201/444 (45%), Gaps = 4/444 (0%)
Query: 33 LSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTA 92
+S L V+ IL+ +D L L FFN++ H+ + IL+H L F A
Sbjct: 64 VSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPA 123
Query: 93 HSILRRIINVNVASSSNTLFDALLCSYRLCD-SSPLVFDAVFKTYANLNKLRDATHTF-L 150
S+L+ ++ + S +F+ L Y C SS FD + + Y ++ D F +
Sbjct: 124 SSLLQTLLLRALKPSD--VFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKM 181
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+ + LP + + +A L L++ R +A+ + +M I P+VY VI + C+
Sbjct: 182 MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
DL RA E + M+ G +V +N LI G C K + A+ +K + + P+VVT+
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
TL+ G CK + + EM +P+ ++L+ G + G E + L + +
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
V P++ YNALI LCK K +A L + K L PN T+S LI C R + A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
M G + + LI+ CK D A + +M+++ + P ++L G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 451 LSRCGRKRLALELCSEMEAKRLLP 474
G+ AL L EM K + P
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAP 505
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 181/405 (44%), Gaps = 18/405 (4%)
Query: 73 LQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAV 132
++T S LLH L R F A + +++V + ++ V
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV------------------YIYTGV 233
Query: 133 FKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCI 192
++ L L A M+ G + N + L + ++ A+ +++ +
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
Query: 193 SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK 252
P+V T ++ CK + LE +++M + SP+ + ++L+ G +G + AL
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALN 353
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
+ + ++ VSPN+ +N LI+ CK K HEA +F M + PN VTY+ LI+ +
Sbjct: 354 LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC 413
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
+ G +T + EM +K + YN+LI G CK G A + E+ L P
Sbjct: 414 RRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVV 473
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
T+++L+ G C + +A ++Y MT G +P+ TF L+S + AV++ +M
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 433 LDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ ++ P+ + + G G A E EM K ++P+ +
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 197/458 (43%), Gaps = 62/458 (13%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTL---------------FDALL 116
T+SIL+ K TA S L +++ + S N+L F A +
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 117 CSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRR 176
+ +L + + + + ++ Y + K+ A + M G P++ + LS L +
Sbjct: 464 INKKL-EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 177 AEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNA 236
A+ + EM + PN T N++I YC+ GD+ +A E L++M + G+ P S+
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 237 LISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
LI G C G A + N + + L++GFC+EGKL EA V EM
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 297 V-----------------------------------APNTVTYNTLINGYSQIGNCETGM 321
V P+ V Y ++I+ S+ G+ +
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 322 RLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA----L 377
+++ M P+ +TY A+I GLCK G +A L ++ + VPN T+ L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762
Query: 378 ITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSM 437
G+ + ++A +++ ++ G N +T+ MLI FC+ + A +++ M+ +
Sbjct: 763 TKGEV---DMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 438 TPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+PD + + N L R + A+EL + M K + P+
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 132/268 (49%), Gaps = 6/268 (2%)
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
+ E AL+ +EM + + ++ ++I K D L++M D GL P V +
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYT 686
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
++I G A + LM N PN VT+ +ING CK G ++EA + S+M+
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPV 746
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVK---PDILTYNALILGLCKDGKT 352
+ PN VTY ++ ++ E M+ E+ +K + TYN LI G C+ G+
Sbjct: 747 SSVPNQVTYGCFLDILTK---GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRI 803
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
++A+ L+ + D + P+ T++ +I C RN+ ++A +++ SMT G P+ + L
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
I C + A ++ +ML + + P+
Sbjct: 864 IHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 123/288 (42%), Gaps = 2/288 (0%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C+ + + + + + KL +A M + G L + L+ + ++
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+EM + P+ +I A K+GD A + M + G P V++ A+I+G
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK-EGKLHEAYRVFSEMKVANVAPN 300
C G + A + S M PN VT+ ++ K E + +A + + + + + N
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI-LKGLLAN 786
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
T TYN LI G+ + G E L M + V PD +TY +I LC+ KKA L
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWN 846
Query: 361 ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNEST 408
+ + + P+ ++ LI G CV +A ++ M G PN T
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 61/112 (54%)
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
N T NM+I +C+ G + A E + +M G+SP +++ +I+ C + + A+++
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ M + P+ V +NTLI+G C G++ +A + +EM + PN T T
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 209/442 (47%), Gaps = 26/442 (5%)
Query: 20 SHLIHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSIL 79
+ ++HS+ PL + + R+ ++ K+ DV+ + F + L T +I+
Sbjct: 72 TRMVHSR-----PLPSIIDFTRLLSVIAKMNRYDVV-ISLFEQMQILGIPP-LLCTCNIV 124
Query: 80 LHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALL---CSYRLCDSSPLVFDAV---- 132
+H + + + A L +++ + T F +LL C + + + +FD +
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVT-FTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 133 FK----TYANLNK-------LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
FK TY L + L A F +M G P + + NA ++ L ++ R A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
R+M + I PNV T +I A+ K G L A E M M + P V ++ +LI+G
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C GLL A +M LM PN V + TLI+GFCK ++ + ++F EM V NT
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
+TY LI GY +G + +F +M + PDI TYN L+ GLC +GK +KA + +
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
+ K + N T++ +I G C E AF ++ S+ S G PN T+ +IS FC+
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 422 FDGAVQVLRDMLDRSMTPDSGI 443
A + + M + P+ +
Sbjct: 484 IHEADSLFKKMKEDGFLPNESV 505
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 171/335 (51%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
+ DA F RM LP++ LS + ++ R +V ++ + +M+ I P + T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
+V+ C S RA L KM +G P +V+F +L++GYC+ + A+ + +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
PNVVT+ TLI CK L+ A +F++M PN VTYN L+ G +IG
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
L +M + +++P+++T+ ALI K GK +A L + + ++ P+ T+ +LI G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C+ + A Q++ M G PNE + LI FCK++ + +++ +M + + +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ + L G GR +A E+ ++M ++R P+
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 159/324 (49%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+M + GF P L + + L+ R E A+A + ++ PNV T +I CK+
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
L A+E +M G P VV++NAL++G C G G A + M R+ PNV+TF
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
LI+ F K GKL EA +++ M +V P+ TY +LING G + ++F M RN
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
P+ + Y LI G CK + + + E+ + +V N T++ LI G C+ + A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
+++ M+S P+ T+ +L+ C N + A+ + M R M + + + G
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 451 LSRCGRKRLALELCSEMEAKRLLP 474
+ + G+ A +L + +K + P
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKP 466
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 160/348 (45%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ F ++ Y + N++ DA F ++ GF P + + + L + R A+ + +
Sbjct: 154 VTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M + PNV T N ++ C+ G A L M + P V++F ALI + G
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A ++ ++M V P+V T+ +LING C G L EA ++F M+ PN V Y T
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI+G+ + E GM++F EM + V + +TY LI G C G+ A + ++
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
P+ T++ L+ G C E+A I+ M N T+ ++I CK + A
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ + + M P+ + + +G R G A L +M+ LP
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 164/364 (45%), Gaps = 4/364 (1%)
Query: 113 DALLCSYRLCDSSPLV----FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFL 168
DAL R+ S PL F + A +N+ F +M+ G P L +CN +
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 169 SSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLS 228
+ + A F +M + P++ T ++ YC + A+ +++ MG
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 229 PTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRV 288
P VV++ LI C L A+++ + MG PNVVT+N L+ G C+ G+ +A +
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 289 FSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
+M + PN +T+ LI+ + ++G L+ M + V PD+ TY +LI GLC
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 349 DGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNEST 408
G +A + ++++ PN ++ LI G C E +I+ M+ G N T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 409 FGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
+ +LI +C D A +V M R PD + L +GL G+ AL + M
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 469 AKRL 472
+ +
Sbjct: 426 KREM 429
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 124/255 (48%)
Query: 120 RLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV 179
R + + + F A+ + + KL +A + M + P + + + ++ L +
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A + M R+ PN +I +CKS + ++ +M G+ +++ LI
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
GYC G +A ++ + M + R P++ T+N L++G C GK+ +A +F M+ +
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
N VTY +I G ++G E LF + +KP+++TY +I G C+ G +A +L
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Query: 360 KELDKDNLVPNASTF 374
K++ +D +PN S +
Sbjct: 492 KKMKEDGFLPNESVY 506
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 104/228 (45%)
Query: 250 ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
AL + + M + R P+++ F L++ K + +F +M++ + P T N +++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 310 GYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP 369
+M + +PD++T+ +L+ G C + + A L ++ P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 370 NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
N T++ LI C + A +++ M + G PN T+ L++ C+ + A +L
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 430 RDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
RDM+ R + P+ +AL + + G+ A EL + M + P+ F
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF 294
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 212/434 (48%), Gaps = 21/434 (4%)
Query: 41 RVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRII 100
R++ L+ +K DD + L F + +H+ P T+ S L +A +++ ++ +++
Sbjct: 59 RLRSGLVDIKADDAIDL-FRDMIHS-RPLP-TVIDFSRLFSAIAKTKQYDLVLALCKQME 115
Query: 101 NVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPT 160
+A + TL + C R C L F A+ K + G+ P
Sbjct: 116 LKGIAHNLYTLSIMINCFCR-CRKLCLAFSAMGKII-----------------KLGYEPN 157
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ + ++ L R AL M P++ T+N ++ C SG A+ ++
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 217
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
KM + G P V++ +++ C G LA+++ M + + V ++ +I+G CK G
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
L A+ +F+EM++ + N +TYN LI G+ G + G +L +M + ++ P+++T++
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
LI K+GK ++A L KE+ + P+ T+++LI G C N+ ++A Q+ M S
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
G PN TF +LI+ +CK D +++ R M R + D+ + L G G+ +A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 461 LELCSEMEAKRLLP 474
EL EM ++++ P
Sbjct: 458 KELFQEMVSRKVPP 471
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 187/378 (49%), Gaps = 21/378 (5%)
Query: 64 HNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCD 123
+ C P++ T+ +L+ + + + A +LR++ N DA+ S
Sbjct: 222 YGCQPNA---VTYGPVLNVMCKSGQTALAMELLRKM------EERNIKLDAVKYS----- 267
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
++ D + K L +A + F M+ G + + N + R +
Sbjct: 268 ---IIIDGLCKH----GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
R+M + I+PNV T +++I ++ K G L A E ++M G++P +++ +LI G+C
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
+ L A +M LM + PN+ TFN LING+CK ++ + +F +M + V +TVT
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
YNTLI G+ ++G LF+EM +V P+I+TY L+ GLC +G+++KA + ++++
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
K + + ++ +I G C + + A+ ++ S+ G P T+ ++I CK
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 424 GAVQVLRDMLDRSMTPDS 441
A + R M + PD
Sbjct: 561 EAELLFRKMEEDGHAPDG 578
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 188/407 (46%), Gaps = 26/407 (6%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSYRLCDSSP 126
+H L T SI+++ RK A S + +II + ++ +TL + L R+ ++
Sbjct: 120 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL-LQLRRAEVALAFYR 185
LV RM E G P L + N ++ L L + AE L +
Sbjct: 180 LVD---------------------RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
+ C PN T V+ CKSG A+E L KM++ + V ++ +I G C G
Sbjct: 219 MVEYGC-QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
L A + + M ++ N++T+N LI GFC G+ + ++ +M + PN VT++
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
LI+ + + G L +EM + PD +TY +LI G CK+ KA +V +
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
PN TF+ LI G C N + +++R M+ G + T+ LI FC+ + A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
++ ++M+ R + P+ L +GL G ALE+ ++E ++
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 158/335 (47%), Gaps = 35/335 (10%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
K DA F M LPT+ + S++ + ++ ++ LA ++M I+ N+YTL+
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++I +C+ L A + K+ +G
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLG---------------------------------- 153
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
PN +TF+TLING C EG++ EA + M P+ +T NTL+NG G
Sbjct: 154 -YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
M L ++M +P+ +TY ++ +CK G+T A L++++++ N+ +A +S +I G
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C + + AF ++ M G + N T+ +LI FC +D ++LRDM+ R + P+
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
S L + + G+ R A EL EM + + P+
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 155/342 (45%), Gaps = 18/342 (5%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFK 134
T++IL+ N ++ +LR +I R + + + F +
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIK------------------RKINPNVVTFSVLID 341
Query: 135 TYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISP 194
++ KLR+A M G P + + + + + A M P
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
N+ T N++I YCK+ + LE KM G+ V++N LI G+C G L +A ++
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
M + +V PN+VT+ L++G C G+ +A +F +++ + + + YN +I+G
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
+ LF + VKP + TYN +I GLCK G +A L +++++D P+ T+
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
+ LI ++ ++ ++ + G+S + ST M+I +
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 172/329 (52%), Gaps = 5/329 (1%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ--LRRAEVALAFYR 185
F A+ Y +A F MKEYG P L + NA + + + + +VA F+
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVA-KFFD 328
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETL-EKMKDMGLSPTVVSFNALISGYCNK 244
EM+R+ + P+ T N ++ A C G L A L ++M + + V S+N L+ C
Sbjct: 329 EMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
G + LA ++ + M R+ PNVV+++T+I+GF K G+ EA +F EM+ +A + V+Y
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 305 NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
NTL++ Y+++G E + + EM +K D++TYNAL+ G K GK + + E+ +
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 365 DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDG 424
++++PN T+S LI G + A +I+R S G + + LI CKN
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 425 AVQVLRDMLDRSMTPDSGILSALYNGLSR 453
AV ++ +M ++P+ +++ + R
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 150/326 (46%), Gaps = 56/326 (17%)
Query: 163 SCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM 222
S N L ++ + + ++A +M I PNV + + VI + K+G AL +M
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 223 KDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKL 282
+ +G++ VS+N L+S Y G AL + M + + +VVT+N L+ G+ K+GK
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 283 HEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL 342
E +VF+EMK +V PN +TY+TLI+GYS+ G + M +F E ++ D++ Y+AL
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 343 ILGLCKDGKTKKAANLVKELDKDNLVPNASTF---------------------------- 374
I LCK+G A +L+ E+ K+ + PN T+
Sbjct: 556 IDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFS 615
Query: 375 ----SAL----------ITGQCVRNNSERA--------------FQIYRSMTSIGYSPNE 406
SAL + GQ ++ R +++R M + PN
Sbjct: 616 SSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNV 675
Query: 407 STFGMLISVFCKNEDFDGAVQVLRDM 432
TF +++ + F+ A +L ++
Sbjct: 676 VTFSAILNACSRCNSFEDASMLLEEL 701
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ ++A+ Y K + F MK LP L + + + + + A+ +RE
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG------ 240
+ + +V + +I A CK+G + A+ +++M G+SP VV++N++I
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 241 ------YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF-------CKEG--KLHEA 285
Y N G L + S + + + F L C+EG +L
Sbjct: 600 MDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCI 659
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
VF +M + PN VT++ ++N S+ + E L EE+
Sbjct: 660 LEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 187/385 (48%), Gaps = 34/385 (8%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMK-EYGFL--PTLESCNAFLSSLLQLRRAE 178
C+ + ++++ + +R A+ ++ +GF+ P + S N+ + +++ +
Sbjct: 87 CEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLD 146
Query: 179 VALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI 238
+ M + C SPNV T + I +CKSG+L AL++ MK LSP VV+F LI
Sbjct: 147 EVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLI 205
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
GYC G L +A+ + M R+S NVVT+ LI+GFCK+G++ A ++S M V
Sbjct: 206 DGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVE 265
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
PN++ Y T+I+G+ Q G+ + M+ +M ++ DI Y +I GLC +GK K+A +
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 359 VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP-------------- 404
V++++K +LVP+ F+ ++ + A +Y + G+ P
Sbjct: 326 VEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 405 ----------------NESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALY 448
N+ + +LI CK DF ++ + + + PD + ++
Sbjct: 386 NGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445
Query: 449 NGLSRCGRKRLALELCSEMEAKRLL 473
GL + G A +L + M + LL
Sbjct: 446 AGLCKQGNLVDAFKLKTRMVQEGLL 470
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 178/338 (52%), Gaps = 9/338 (2%)
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
G+ P S N+ +S + +L + + A M R P+V + N +I +C++GD+ A
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 216 ---LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTL 272
LE+L P +VSFN+L +G+ +L +M SPNVVT++T
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTW 169
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQV 332
I+ FCK G+L A + F MK ++PN VT+ LI+GY + G+ E + L++EM R ++
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ 392
+++TY ALI G CK G+ ++A + + +D + PN+ ++ +I G R +S+ A +
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 393 IYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLS 452
M + G + + +G++IS C N A +++ DM + PD I + + N
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 453 RCGRKRLALELCSEMEAKRLLPEGFGQEKIAITSPENG 490
+ GR + A+ + +L+ GF + +A+++ +G
Sbjct: 350 KSGRMKAAVNM-----YHKLIERGFEPDVVALSTMIDG 382
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 169/384 (44%), Gaps = 30/384 (7%)
Query: 120 RLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV 179
+ C + + + T+ +L+ A +F MK P + + + + EV
Sbjct: 157 KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEV 216
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A++ Y+EMRR +S NV T +I +CK G++ RA E +M + + P + + +I
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
G+ +G A+K + M N + ++ + +I+G C GKL EA + +M+ +++ P
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT--------------------- 338
+ V + T++N Y + G + + ++ ++ +PD++
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Query: 339 ---------YNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
Y LI LCK+G + L ++ + LVP+ +++ I G C + N
Sbjct: 397 CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Query: 390 AFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYN 449
AF++ M G + + LI A QV +ML+ ++PDS + L
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Query: 450 GLSRCGRKRLALELCSEMEAKRLL 473
+ G A +L +M+ + L+
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGLV 540
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 155/333 (46%), Gaps = 37/333 (11%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
AL F +R+ P+ +T N I S +L+ L + G +P SFN+++S
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVS 64
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRV----------- 288
C G + A + M + P+V+++N+LI+G C+ G + A V
Sbjct: 65 FVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFI 124
Query: 289 --------------FSEMKVAN------------VAPNTVTYNTLINGYSQIGNCETGMR 322
FS+MK+ + +PN VTY+T I+ + + G + ++
Sbjct: 125 CKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 323 LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC 382
F M R+ + P+++T+ LI G CK G + A +L KE+ + + N T++ALI G C
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 383 VRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSG 442
+ +RA ++Y M PN + +I F + D D A++ L ML++ M D
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304
Query: 443 ILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ +GL G+ + A E+ +ME L+P+
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 11/245 (4%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTL 199
KL++AT M++ +P + +++ + R + A+ Y ++ P+V L
Sbjct: 317 GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 200 NMVICAYCKSGDLPRALE--TLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM 257
+ +I K+G L A+ +EK D V + LI C +G ++ S +
Sbjct: 377 STMIDGIAKNGQLHEAIVYFCIEKAND-------VMYTVLIDALCKEGDFIEVERLFSKI 429
Query: 258 GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNC 317
+ P+ + + I G CK+G L +A+++ + M + + + Y TLI G + G
Sbjct: 430 SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLM 489
Query: 318 ETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSAL 377
++F+EM + + PD ++ LI K+G A++L+ ++ + LV S A
Sbjct: 490 VEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS--DAD 547
Query: 378 ITGQC 382
+ QC
Sbjct: 548 CSKQC 552
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 196/408 (48%), Gaps = 18/408 (4%)
Query: 67 NPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP 126
N +H + T +I+++ K A+S+L +++ + + T
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTT---------------- 160
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
F+ + K K+ +A RM E G P + + N+ ++ + + +AL R+
Sbjct: 161 --FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M + +V+T + +I + C+ G + A+ ++M+ G+ +VV++N+L+ G C G
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ M + + PNV+TFN L++ F KEGKL EA ++ EM ++PN +TYNT
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
L++GY + + M RN+ PDI+T+ +LI G C + + + + K
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
LV NA T+S L+ G C + A ++++ M S G P+ T+G+L+ C N + A+
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
++ D+ M + + + G+ + G+ A L + K + P
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 162/325 (49%)
Query: 145 ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVIC 204
A F M+ G ++ + N+ + L + + ++M I PNV T N+++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 205 AYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSP 264
+ K G L A E ++M G+SP ++++N L+ GYC + L A M LM + SP
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 265 NVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF 324
++VTF +LI G+C ++ + +VF + + N VTY+ L+ G+ Q G + LF
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
+EM + V PD++TY L+ GLC +GK +KA + ++L K + ++ +I G C
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGIL 444
E A+ ++ S+ G PN T+ ++IS CK A +LR M + P+
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 445 SALYNGLSRCGRKRLALELCSEMEA 469
+ L R G + +L EM++
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 181/370 (48%), Gaps = 35/370 (9%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
K DA F M LP+L + F S++ + ++ + L F +++ + I+ N+YTLN
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 201 MVICAYCK-----------------------------------SGDLPRALETLEKMKDM 225
++I +C+ G + A+ +++M +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 226 GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
G P VV++N++++G C G LAL + M V +V T++T+I+ C++G + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
+F EM+ + + VTYN+L+ G + G G L ++M ++ P+++T+N L+
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 346 LCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
K+GK ++A L KE+ + PN T++ L+ G C++N A + M SP+
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 406 ESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCS 465
TF LI +C + D ++V R++ R + ++ S L G + G+ +LA EL
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 466 EMEAKRLLPE 475
EM + +LP+
Sbjct: 428 EMVSHGVLPD 437
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 177/365 (48%), Gaps = 3/365 (0%)
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
SS + ++++ + K D M +P + + N L ++ + + A
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
Y+EM ISPN+ T N ++ YC L A L+ M SP +V+F +LI GYC
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
+ +K+ + + N VT++ L+ GFC+ GK+ A +F EM V P+ +T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
Y L++G G E + +FE++ ++++ I+ Y +I G+CK GK + A NL L
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
+ PN T++ +I+G C + + A + R M G +PN+ T+ LI ++ D
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELC--SEMEAKRLLPEGFGQEK 481
+ +++ +M + D+ + + + L KRL L C ++++ L E G EK
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLLS-AMKRLTLRYCLSKGSKSRQDLLELSGSEK 619
Query: 482 IAITS 486
I ++S
Sbjct: 620 IRLSS 624
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 75/160 (46%)
Query: 318 ETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSAL 377
+ + LF+EM R++ P ++ ++ + + + + K+L+ + + N T + +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 378 ITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSM 437
I C + A+ + + +GY P+ +TF LI AV ++ M++
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 438 TPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
PD +++ NG+ R G LAL+L +ME + + + F
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 188/395 (47%), Gaps = 6/395 (1%)
Query: 79 LLHTLANN----RKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP--LVFDAV 132
L H + + R K+ +S+L IIN + +D ++ S + SP L F+ V
Sbjct: 134 LFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLV 193
Query: 133 FKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCI 192
K L + A F M E LP + + L + R + A+ EM+ +
Sbjct: 194 IKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253
Query: 193 SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK 252
SP+ N++I CK GDL R + ++ M G P V++N LI G C KG L A+
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
+ M + + PN VT+ TLING K+ + +A R+ S M+ N Y+ LI+G
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
+ G E M L+ +M KP+I+ Y+ L+ GLC++GK +A ++ + +PNA
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY 433
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
T+S+L+ G E A Q+++ M G S N+ + +LI C A+ V M
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 433 LDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
L + PD+ S++ GL G AL+L EM
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 7/348 (2%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C SP++++ + L T M G +P + N + L + + A+
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 312
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+ M PN T +I K A+ L M++ G ++ LISG
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL 372
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
+G A+ + M PN+V ++ L++G C+EGK +EA + + M + PN
Sbjct: 373 FKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNA 432
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
TY++L+ G+ + G CE +++++EM + + Y+ LI GLC G+ K+A + +
Sbjct: 433 YTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSK 492
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM---TSIGYSPNESTFGMLISVFCK 418
+ + P+ +S++I G C + + A ++Y M P+ T+ +L+ C
Sbjct: 493 MLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCM 552
Query: 419 NEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSR----CGRKRLALE 462
+D AV +L MLDR PD + N LS C + R LE
Sbjct: 553 QKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 129/254 (50%)
Query: 224 DMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLH 283
+M +SP +SFN +I C + A+++ M + P+ T+ TL++G CKE ++
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 284 EAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALI 343
EA + EM+ +P+ V YN LI+G + G+ +L + M P+ +TYN LI
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 344 LGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYS 403
GLC GK KA +L++ + +PN T+ LI G + + A ++ SM GY
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 404 PNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
N+ + +LIS K + A+ + R M ++ P+ + S L +GL R G+ A E+
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 464 CSEMEAKRLLPEGF 477
+ M A LP +
Sbjct: 420 LNRMIASGCLPNAY 433
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 132/313 (42%), Gaps = 37/313 (11%)
Query: 74 QTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVF 133
+S+L+ L K + A S+ R++ + + C + +V+ +
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKM------------------AEKGCKPNIVVYSVLV 404
Query: 134 KTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCIS 193
K +A RM G LP + ++ + + E A+ ++EM + S
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
N + +++I C G + A+ KM +G+ P V+++++I G C G + ALK+
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 254 KSLM---GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
M + P+VVT+N L++G C + + A + + M P+ +T NT +N
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
Query: 311 YSQIGN-CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP 369
S+ N C+ G EE L++ L K + A +V+ + L P
Sbjct: 585 LSEKSNSCDKGRSFLEE---------------LVVRLLKRQRVSGACTIVEVMLGKYLAP 629
Query: 370 NASTFSALITGQC 382
ST++ ++ C
Sbjct: 630 KTSTWAMIVREIC 642
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 177/327 (54%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
KL D+ F M + LP++ + LS++ ++++ +V + + +M+ I N+ T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
+++ +C+ L AL L KM +G P++V+F +L++G+C + AL M M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
PNVV +NT+I+G CK ++ A + + M+ + P+ VTYN+LI+G G
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
R+ M + ++ PD+ T+NALI K+G+ +A +E+ + +L P+ T+S LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C+ + + A +++ M S G P+ T+ +LI+ +CK++ + +++ +M R + +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 441 SGILSALYNGLSRCGRKRLALELCSEM 467
+ + L G R G+ +A E+ M
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 197/427 (46%), Gaps = 21/427 (4%)
Query: 49 LKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS 108
+K DD L L FF+ V C P ++ S LL ++ +K+ + ++ + +
Sbjct: 60 MKLDDSLDL-FFHMVQ-CRPLP-SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIP--- 113
Query: 109 NTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFL 168
+ LC + L+ + ++L A +M + G P++ + + L
Sbjct: 114 ----------HNLCTCNILL-----NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 169 SSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLS 228
+ + R AL + +M PNV N +I CKS + AL+ L +M+ G+
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 229 PTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRV 288
P VV++N+LISG C+ G A +M S M + P+V TFN LI+ KEG++ EA
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 289 FSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
+ EM ++ P+ VTY+ LI G + +F M PD++TY+ LI G CK
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 349 DGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNEST 408
K + L E+ + +V N T++ LI G C A +I+R M G PN T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 409 FGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
+ +L+ C N + A+ +L DM M D + + G+ + G A ++ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 469 AKRLLPE 475
+ L+P+
Sbjct: 459 CQGLMPD 465
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 209/475 (44%), Gaps = 29/475 (6%)
Query: 1 MRRNIRFSGTDLDFVNIAHSHLIHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFF 60
+R IRF D D +++ H++ + PL + R+ + K+K DV+ +
Sbjct: 53 LRNGIRFMKLD-DSLDLFF-HMVQCR-----PLPSIADFSRLLSAISKMKKYDVV---IY 102
Query: 61 NWVH-NCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY 119
W H L T +ILL+ + A S L ++I +
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH--------------- 147
Query: 120 RLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV 179
+ S + F ++ + +++ DA + F +M G+ P + N + L + ++ +
Sbjct: 148 ---EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDN 204
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
AL M +D I P+V T N +I C SG A + M + P V +FNALI
Sbjct: 205 ALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
+G + A + M + P++VT++ LI G C +L EA +F M P
Sbjct: 265 ACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP 324
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+ VTY+ LINGY + E GM+LF EM + V + +TY LI G C+ GK A +
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
+ + + PN T++ L+ G C E+A I M G + T+ ++I CK
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ A + + + + PD + + GL + G +R A L +M+ +LP
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 138/280 (49%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ ++++ + + DAT M + P + + NA + + ++ R A FY E
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M R + P++ T +++I C L A E M G P VV+++ LI+GYC
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ +K+ M V N VT+ LI G+C+ GKL+ A +F M V PN +TYN
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
L++G G E + + +M +N + DI+TYN +I G+CK G+ A ++ L+
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
L+P+ T++ ++ G + A ++R M G PNE
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%)
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
KL ++ +F M P+ ++ L++ S++ + + L+E+M + ++ T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
L+ C+ + A + + ++ K P+ TF +L+ G C + A ++ M +
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
GY PN + +I CK++ D A+ +L M + PD ++L +GL GR A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 461 LELCSEMEAKRLLPEGF 477
+ S M + + P+ F
Sbjct: 241 TRMVSCMTKREIYPDVF 257
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C + + + Y K+ F M + G + + + + + VA
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+R M + PN+ T N+++ C +G + +AL L M+ G+ +V++N +I G
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
C G + A + + + P++ T+ T++ G K+G EA +F +MK + PN
Sbjct: 442 CKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 178/371 (47%), Gaps = 17/371 (4%)
Query: 112 FDALLCSYRLCDSSPLV---------FDAVFKT--YANLNKLRDATHTFLRMKEYGFLPT 160
FD++ Y+L S LV F FK Y+ KL D M G P
Sbjct: 180 FDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLD------EMTSLGIKPN 233
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ ++ L + + E A + M++ + PN+YT + +I YCK+G++ +A +
Sbjct: 234 VYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK 293
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
++ L P VV F L+ G+C L A + M + V PN+ +N LI+G CK G
Sbjct: 294 EILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSG 353
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
+ EA + SEM+ N++P+ TY LING RLF++M ++ P TYN
Sbjct: 354 NMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYN 413
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
+LI G CK+ ++A +L E+ + PN TFS LI G C + + A +Y MT
Sbjct: 414 SLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK 473
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
G P+ T+ LI K + A+++ DML+ + P+ + L +G + GR +A
Sbjct: 474 GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 461 LELCSEMEAKR 471
++ E +R
Sbjct: 534 IDFYQENNQQR 544
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 201/411 (48%), Gaps = 9/411 (2%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRII-----NVNVASSSNTLFDALLCSYRLCDS 124
S+ LQ+ S ++H L K+ A +++ +I + ++ S+ LF+AL +
Sbjct: 72 SNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALE-DIQSPKF 130
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
S VF + + + +A MK P ++C + L+ L++ RR + Y
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDY 187
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
+ M + P+V+ ++ K G + + L++M +G+ P V + I C
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
+ A KM LM + V PN+ T++ +I+G+CK G + +AY ++ E+ VA + PN V +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
Query: 305 NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
TL++G+ + T LF M + V P++ YN LI G CK G +A L+ E++
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 365 DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDG 424
NL P+ T++ LI G C+ + A ++++ M + P+ +T+ LI +CK + +
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 425 AVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
A+ + +M + P+ S L +G + A+ L EM K ++P+
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 151/312 (48%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
+ A+ Y +R A + + LP + + + R A + + M
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
+ + PN+Y N +I +CKSG++ A+ L +M+ + LSP V ++ LI+G C + +
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
A ++ M N R+ P+ T+N+LI+G+CKE + +A + SEM + V PN +T++TLI
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
+GY + + + M L+ EM + PD++TY ALI K+ K+A L ++ + +
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
PN TF+ L+ G A Y+ N F LI C+N A +
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 429 LRDMLDRSMTPD 440
DM +TPD
Sbjct: 572 FSDMRSCGITPD 583
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 150/314 (47%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+VF + + +L A F+ M ++G P L N + + A+ E
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M +SP+V+T ++I C + A +KMK+ + P+ ++N+LI GYC +
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ AL + S M V PN++TF+TLI+G+C + A ++ EM + + P+ VTY
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI+ + + N + +RL+ +M + P+ T+ L+ G K+G+ A + +E ++
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
N F+ LI G C RA + + M S G +P+ ++ ++ + + +
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM 604
Query: 427 QVLRDMLDRSMTPD 440
+ DM+ + P+
Sbjct: 605 MLQCDMIKTGILPN 618
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 137/287 (47%), Gaps = 8/287 (2%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
D + V++ + + + +A M+ P + + ++ L + A
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
+++M+ + I P+ T N +I YCK ++ +AL+ +M G+ P +++F+ LI GYC
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 243 N----KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
N K +GL +M ++ G + P+VVT+ LI+ KE + EA R++S+M A +
Sbjct: 456 NVRDIKAAMGLYFEM-TIKG---IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
PN T+ L++G+ + G + ++E + + + + + LI GLC++G +A+
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 359 VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
++ + P+ ++ +++ G + M G PN
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 5/264 (1%)
Query: 214 RALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLI 273
R LE ++ S V F+ LI + GL AL + M + SP+ +++
Sbjct: 117 RLFNALEDIQSPKFSIGV--FSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSIL 171
Query: 274 NGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVK 333
NG + + + + M + P+ Y L + G +L +EM +K
Sbjct: 172 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIK 231
Query: 334 PDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQI 393
P++ Y IL LC+D K ++A + + + K ++PN T+SA+I G C N +A+ +
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 394 YRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSR 453
Y+ + PN FG L+ FCK + A + M+ + P+ + + L +G +
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 454 CGRKRLALELCSEMEAKRLLPEGF 477
G A+ L SEME+ L P+ F
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVF 375
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 118/284 (41%), Gaps = 18/284 (6%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFK 134
T++IL++ L + A+ + +++ N + SS T ++++
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT------------------YNSLIH 417
Query: 135 TYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISP 194
Y + A M G P + + + + +R + A+ Y EM I P
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
+V T +I A+ K ++ AL M + G+ P +F L+ G+ +G L +A+
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
R N V F LI G C+ G + A R FS+M+ + P+ +Y +++ G+ Q
Sbjct: 538 QENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQE 597
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
M L +M + + P++L L +G K A L
Sbjct: 598 KRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFL 641
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 207/435 (47%), Gaps = 21/435 (4%)
Query: 41 RVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRII 100
R++ ++ +K DD +++ F + P L S L +A +++ + +++
Sbjct: 43 RLRSGIVDIKEDD--AVDLFQEMTRSRPRPR-LIDFSRLFSVVARTKQYDLVLDLCKQME 99
Query: 101 NVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPT 160
+A + TL + C R C L F A+ K + G+ P
Sbjct: 100 LKGIAHNLYTLSIMINCCCR-CRKLSLAFSAMGKII-----------------KLGYEPD 141
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ + ++ L R AL M P + TLN ++ C +G + A+ ++
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLID 201
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
+M + G P V++ ++ C G LA+++ M ++ + V ++ +I+G CK+G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
L A+ +F+EM++ + + Y TLI G+ G + G +L +M + ++ PD++ ++
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
ALI K+GK ++A L KE+ + + P+ T+++LI G C N ++A + M S
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
G PN TF +LI+ +CK D +++ R M R + D+ + L G G+ +A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 461 LELCSEMEAKRLLPE 475
EL EM ++R+ P+
Sbjct: 442 KELFQEMVSRRVRPD 456
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 155/300 (51%)
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNM 201
L +A + F M+ GF + + R + R+M + I+P+V +
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYR 261
+I + K G L A E ++M G+SP V++ +LI G+C + L A M LM +
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGM 321
PN+ TFN LING+CK + + +F +M + V +TVTYNTLI G+ ++G E
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 322 RLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQ 381
LF+EM +V+PDI++Y L+ GLC +G+ +KA + ++++K + + ++ +I G
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 382 CVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
C + + A+ ++ S+ G P+ T+ ++I CK A + R M + +P+
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 184/406 (45%), Gaps = 24/406 (5%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSYRLCDSSP 126
+H L T SI+++ RK A S + +II + + +TL + L R+ ++
Sbjct: 104 AHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
LV RM E G PTL + NA ++ L + A+
Sbjct: 164 LVD---------------------RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDR 202
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M PN T V+ CKSG A+E L KM++ + V ++ +I G C G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A + + M +++ + TLI GFC G+ + ++ +M + P+ V ++
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI+ + + G L +EM + + PD +TY +LI G CK+ + KA +++ +
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
PN TF+ LI G C N + +++R M+ G + T+ LI FC+ + A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
++ ++M+ R + PD L +GL G ALE+ ++E ++
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 165/339 (48%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+++ + + + + D M + P + + +A + ++ + A ++E
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M + ISP+ T +I +CK L +A L+ M G P + +FN LI+GYC L
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ L++ M V + VT+NTLI GFC+ GKL A +F EM V P+ V+Y
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
L++G G E + +FE++ +++++ DI YN +I G+C K A +L L
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ P+ T++ +I G C + + A ++R M G+SPN T+ +LI D +
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCS 465
+++ ++ + D+ + + + LS K+ L++ S
Sbjct: 583 KLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDMLS 621
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 205/439 (46%), Gaps = 19/439 (4%)
Query: 39 PFRVKHI--LLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSIL 96
P KH+ ++K + D + +LE FN + HTL T+ ++ L KF+ +L
Sbjct: 4 PLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 63
Query: 97 RRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYG 156
+ NV N + + V+ K Y K+++A + F RM Y
Sbjct: 64 VDM-RENVG---NHMLEG-------------VYVGAMKNYGRKGKVQEAVNVFERMDFYD 106
Query: 157 FLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRAL 216
PT+ S NA +S L+ + A Y MR I+P+VY+ + + ++CK+ AL
Sbjct: 107 CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAAL 166
Query: 217 ETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF 276
L M G VV++ ++ G+ + ++ M VS + TFN L+
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226
Query: 277 CKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDI 336
CK+G + E ++ ++ V PN TYN I G Q G + +R+ + KPD+
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 337 LTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRS 396
+TYN LI GLCK+ K ++A + ++ + L P++ T++ LI G C + A +I
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 397 MTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
G+ P++ T+ LI C + + A+ + + L + + P+ + + L GLS G
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 457 KRLALELCSEMEAKRLLPE 475
A +L +EM K L+PE
Sbjct: 407 ILEAAQLANEMSEKGLIPE 425
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 188/431 (43%), Gaps = 20/431 (4%)
Query: 64 HNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASS--SNTLFDALLC---- 117
++C P T+ +++ ++ L ++ F AH + R+ + + S T+ C
Sbjct: 105 YDCEP---TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161
Query: 118 -----------SYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNA 166
S + C+ + + + V + N + F +M G L + N
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 167 FLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMG 226
L L + + ++ + + PN++T N+ I C+ G+L A+ + + + G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 227 LSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
P V+++N LI G C A M N + P+ T+NTLI G+CK G + A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGL 346
R+ + P+ TY +LI+G G + LF E +KP+++ YN LI GL
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 347 CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
G +AA L E+ + L+P TF+ L+ G C A + + M S GY P+
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 407 STFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSE 466
TF +LI + + A+++L MLD + PD ++L NGL + + +E
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 467 MEAKRLLPEGF 477
M K P F
Sbjct: 522 MVEKGCAPNLF 532
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 185/407 (45%), Gaps = 31/407 (7%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCD------SSPLV 128
T++ L++ L N KF+ A L +++N + S T ++ L+ Y C + +V
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYT-YNTLIAGY--CKGGMVQLAERIV 344
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
DAVF GF+P + + + L ALA + E
Sbjct: 345 GDAVFN---------------------GFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
I PNV N +I G + A + +M + GL P V +FN L++G C G +
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
A + +M + P++ TFN LI+G+ + K+ A + M V P+ TYN+L+
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
NG + E M ++ M P++ T+N L+ LC+ K +A L++E+ ++
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMT-SIGYSPNESTFGMLISVFCKNEDFDGAVQ 427
P+A TF LI G C + + A+ ++R M + S + T+ ++I F + + A +
Sbjct: 564 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEK 623
Query: 428 VLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ ++M+DR + PD + +G + G L + EM +P
Sbjct: 624 LFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 187/429 (43%), Gaps = 24/429 (5%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNT--LFDALLCSYRLCDSSPL 127
S L T + LL L K +L ++I V + T LF LC D +
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 128 VFDAVFK--------TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
+ + + TY NL +K ++A +M G P + N ++
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 173 QLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVV 232
+ ++A + + P+ +T +I C G+ RAL + G+ P V+
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
+N LI G N+G++ A ++ + M + P V TFN L+NG CK G + +A + M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
P+ T+N LI+GYS E + + + M N V PD+ TYN+L+ GLCK K
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
+ K + + PN TF+ L+ C + A + M + +P+ TFG L
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL----ALELCSEME 468
I FCKN D DGA + R M + S + YN + ++L A +L EM
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSS---TPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 469 AKRLLPEGF 477
+ L P+G+
Sbjct: 630 DRCLGPDGY 638
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 150/316 (47%), Gaps = 1/316 (0%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
++++ + K +N + +A M E G +P +++ N ++ L ++ A +
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M P+++T N++I Y + ALE L+ M D G+ P V ++N+L++G C
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
++ M +PN+ TFN L+ C+ KL EA + EMK +V P+ VT+ T
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 307 LINGYSQIGNCETGMRLFEEMGRN-QVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
LI+G+ + G+ + LF +M +V TYN +I + A L +E+
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
L P+ T+ ++ G C N ++ M G+ P+ +T G +I+ C + A
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Query: 426 VQVLRDMLDRSMTPDS 441
++ M+ + + P++
Sbjct: 692 AGIIHRMVQKGLVPEA 707
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 144/311 (46%), Gaps = 9/311 (2%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
F+ + + + DA M G+ P + + N + + E AL M
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
+ + P+VYT N ++ CK+ +ET + M + G +P + +FN L+ C L
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA-NVAPNTVTYNTL 307
AL + M N V+P+ VTF TLI+GFCK G L AY +F +M+ A V+ +T TYN +
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
I+ +++ N +LF+EM + PD TY ++ G CK G + E+ ++
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668
Query: 368 VPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQ 427
+P+ +T +I CV + A I M G P ++ C + + A
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAAP 722
Query: 428 --VLRDMLDRS 436
VL D+L +S
Sbjct: 723 KLVLEDLLKKS 733
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 147/328 (44%), Gaps = 5/328 (1%)
Query: 153 KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC---ISPNVYTLNMVICAYCKS 209
KE GF TL + + + L + E +MR + + VY M Y +
Sbjct: 32 KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMK--NYGRK 89
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF 269
G + A+ E+M PTV S+NA++S + G A K+ M + ++P+V +F
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
+ FCK + H A R+ + M N V Y T++ G+ + G LF +M
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
+ V + T+N L+ LCK G K+ L+ ++ K ++PN T++ I G C R +
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 390 AFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYN 449
A ++ + G P+ T+ LI CKN F A L M++ + PDS + L
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 450 GLSRCGRKRLALELCSEMEAKRLLPEGF 477
G + G +LA + + +P+ F
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQF 357
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 179/362 (49%), Gaps = 19/362 (5%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL-LQLRRAEV-------- 179
F+ + K + + +KL + TF ++ + GF P + + N L L L+ R +E
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 180 ------ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
A+A + +M ++P V T N +I C G + A + KM GL VV+
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
+ +++G C G AL + S M + P+VV ++ +I+ CK+G +A +FSEM
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
+APN TYN +I+G+ G RL +M ++ PD+LT+NALI K+GK
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 354 KAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
+A L E+ + P+ T++++I G C N + A ++ M SP+ TF +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTII 439
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
V+C+ + D +Q+LR++ R + ++ + L +G A +L EM + +
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 474 PE 475
P+
Sbjct: 500 PD 501
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 170/357 (47%), Gaps = 4/357 (1%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+++ A+ DA + F M E G P + + N + R A R+
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M I+P+V T N +I A K G L A + ++M + P V++N++I G+C
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
A M LM SP+VVTFNT+I+ +C+ ++ E ++ E+ + NT TYNT
Sbjct: 417 FDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI+G+ ++ N LF+EM + V PD +T N L+ G C++ K ++A L + +
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ + ++ +I G C + + A+ ++ S+ G P+ T+ ++IS FC A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQEKIA 483
+ M D PD+ + L G + G ++EL SEM + + F + +A
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVA 649
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 164/330 (49%), Gaps = 15/330 (4%)
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNM 201
L DA F M T CN + +++ R +VA++ YR+M I N+Y+ N+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK-------GLLGL----- 249
+I +C L +L T K+ +G P VV+FN L+ G C + L G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 250 ---ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
A+ + M ++P V+TFNTLING C EG++ EA + ++M + + VTY T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
++NG ++G+ ++ + L +M +KPD++ Y+A+I LCKDG A L E+ +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ PN T++ +I G C A ++ R M +P+ TF LIS K A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
++ +ML R + PD+ +++ G + R
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 102/248 (41%), Gaps = 20/248 (8%)
Query: 230 TVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF 289
T V N +I + +A+ + M R+ N+ +FN LI FC KL + F
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 290 SEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKD 349
++ P+ VT+NTL++G + LF M V+ L
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM----VETGFL------------ 208
Query: 350 GKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
+A L ++ + L P TF+ LI G C+ A + M G + T+
Sbjct: 209 ----EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
G +++ CK D A+ +L M + + PD I SA+ + L + G A L SEM
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 470 KRLLPEGF 477
K + P F
Sbjct: 325 KGIAPNVF 332
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 176/334 (52%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
+ +A F M E LP++ L+ + ++++ +V + ++ +S ++YT N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
+++ +C+S A L KM +G P +V+F +LI+G+C + A+ M + M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
+ P+VV + T+I+ CK G ++ A +F +M+ + P+ V Y +L+NG G
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
L M + ++KPD++T+NALI K+GK A L E+ + ++ PN T+++LI G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C+ + A Q++ M + G P+ + LI+ FCK + D A+++ +M + +T +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ + L G + G+ +A E+ S M ++ + P
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 3/325 (0%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+M + GF P + + + ++ R E A++ +M I P+V +I + CK+G
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
+ AL ++M++ G+ P VV + +L++G CN G A + M ++ P+V+TFN
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
LI+ F KEGK +A +++EM ++APN TY +LING+ G + ++F M
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
PD++ Y +LI G CK K A + E+ + L N T++ LI G A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSM---TPDSGILSAL 447
+++ M S G PN T+ +L+ C N A+ + DM R M P+ + L
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 448 YNGLSRCGRKRLALELCSEMEAKRL 472
+GL G+ AL + +M + +
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREM 456
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 163/327 (49%), Gaps = 3/327 (0%)
Query: 145 ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVIC 204
A F +M+ YG P + + ++ L R A + R M + I P+V T N +I
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 205 AYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSP 264
A+ K G A E +M M ++P + ++ +LI+G+C +G + A +M LM P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 265 NVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF 324
+VV + +LINGFCK K+ +A ++F EM + NT+TY TLI G+ Q+G +F
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK---DNLVPNASTFSALITGQ 381
M V P+I TYN L+ LC +GK KKA + +++ K D + PN T++ L+ G
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 382 CVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
C E+A ++ M T+ ++I CK AV + + + + P+
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495
Query: 442 GILSALYNGLSRCGRKRLALELCSEME 468
+ + +GL R G K A L +M+
Sbjct: 496 VTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 178/386 (46%), Gaps = 2/386 (0%)
Query: 87 RKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDAT 146
R F ILR ++ + + LF ++ S L S + F + A + K
Sbjct: 35 RAFCNYREILRNGLHSLQFNEALDLFTHMVESRPL--PSIIDFTKLLNVIAKMKKFDVVI 92
Query: 147 HTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAY 206
+ ++ G L +CN ++ Q + +A +F +M + P++ T +I +
Sbjct: 93 NLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGF 152
Query: 207 CKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNV 266
C + A+ + +M +MG+ P VV + +I C G + AL + M NY + P+V
Sbjct: 153 CLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV 212
Query: 267 VTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
V + +L+NG C G+ +A + M + P+ +T+N LI+ + + G L+ E
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE 272
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
M R + P+I TY +LI G C +G +A + ++ P+ +++LI G C
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
+ A +I+ M+ G + N T+ LI F + + A +V M+ R + P+ +
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 447 LYNGLSRCGRKRLALELCSEMEAKRL 472
L + L G+ + AL + +M+ + +
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREM 418
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 5/277 (1%)
Query: 214 RALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLI 273
AL+ M + P+++ F L++ + + + + VS ++ T N L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 274 NGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVK 333
N FC+ + + A +M P+ VT+ +LING+ E M + +M +K
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 334 PDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQI 393
PD++ Y +I LCK+G A +L +++ + P+ +++L+ G C A +
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 394 YRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSR 453
R MT P+ TF LI F K F A ++ +M+ S+ P+ ++L NG
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 454 CGRKRLALELCSEMEAKRLLPEGFGQEKIAITSPENG 490
G A ++ ME K P + +A TS NG
Sbjct: 295 EGCVDEARQMFYLMETKGCFP-----DVVAYTSLING 326
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%)
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
+ +EA +F+ M + P+ + + L+N +++ + + L + + V D+ T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
L+ C+ + A++ + ++ K P+ TF++LI G C+ N E A + M +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
G P+ + +I CKN + A+ + M + + PD + ++L NGL GR R A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 461 LELCSEMEAKRLLPE 475
L M +++ P+
Sbjct: 232 DSLLRGMTKRKIKPD 246
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ + + + + + K A F M G P + + N L L + + AL + +
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 187 MRR---DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
M++ D ++PN++T N+++ C +G L +AL E M+ + ++++ +I G C
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
G + A+ + + + V PNVVT+ T+I+G +EG HEA+ +F +MK V+
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 179/362 (49%), Gaps = 19/362 (5%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL-LQLRRAEV-------- 179
F+ + K + + +KL + TF ++ + GF P + + N L L L+ R +E
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 180 ------ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
A+A + +M ++P V T N +I C G + A + KM GL VV+
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
+ +++G C G AL + S M + P+VV ++ +I+ CK+G +A +FSEM
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
+APN TYN +I+G+ G RL +M ++ PD+LT+NALI K+GK
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 354 KAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
+A L E+ + P+ T++++I G C N + A ++ M SP+ TF +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTII 439
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
V+C+ + D +Q+LR++ R + ++ + L +G A +L EM + +
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 474 PE 475
P+
Sbjct: 500 PD 501
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 173/371 (46%), Gaps = 8/371 (2%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+++ A+ DA + F M E G P + + N + R A R+
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M I+P+V T N +I A K G L A + ++M + P V++N++I G+C
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
A M LM SP+VVTFNT+I+ +C+ ++ E ++ E+ + NT TYNT
Sbjct: 417 FDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI+G+ ++ N LF+EM + V PD +T N L+ G C++ K ++A L + +
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ + ++ +I G C + + A+ ++ S+ G P+ T+ ++IS FC A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF----GQEKI 482
+ M D PD+ + L G + G ++EL SEM + + F +E I
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEII 652
Query: 483 AITSPENGTNN 493
S E N
Sbjct: 653 CRVSDEEIIEN 663
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 164/330 (49%), Gaps = 15/330 (4%)
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNM 201
L DA F M T CN + +++ R +VA++ YR+M I N+Y+ N+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK-------GLLGL----- 249
+I +C L +L T K+ +G P VV+FN L+ G C + L G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 250 ---ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
A+ + M ++P V+TFNTLING C EG++ EA + ++M + + VTY T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
++NG ++G+ ++ + L +M +KPD++ Y+A+I LCKDG A L E+ +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ PN T++ +I G C A ++ R M +P+ TF LIS K A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
++ +ML R + PD+ +++ G + R
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 102/248 (41%), Gaps = 20/248 (8%)
Query: 230 TVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF 289
T V N +I + +A+ + M R+ N+ +FN LI FC KL + F
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 290 SEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKD 349
++ P+ VT+NTL++G + LF M V+ L
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM----VETGFL------------ 208
Query: 350 GKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
+A L ++ + L P TF+ LI G C+ A + M G + T+
Sbjct: 209 ----EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
G +++ CK D A+ +L M + + PD I SA+ + L + G A L SEM
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 470 KRLLPEGF 477
K + P F
Sbjct: 325 KGIAPNVF 332
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 178/335 (53%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
KL DA F M + P++ N LS++++L++ +V ++ ++M I ++YT N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
+VI +C + AL L KM +G P V+ +L++G+C + + A+ + M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
P++V +N +I+ CK ++++A+ F E++ + PN VTY L+NG
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
RL +M + ++ P+++TY+AL+ K+GK +A L +E+ + ++ P+ T+S+LI G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C+ + + A Q++ M S G + ++ LI+ FCK + + +++ R+M R + +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ + L G + G A E S+M+ + P+
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 160/313 (51%), Gaps = 35/313 (11%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD--------- 190
N++ DA +M E G+ P + + NA + SL + +R A F++E+ R
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 191 -------C-------------------ISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
C I+PNV T + ++ A+ K+G + A E E+M
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
M + P +V++++LI+G C + A +M LM + +VV++NTLINGFCK ++ +
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
++F EM + NTVTYNTLI G+ Q G+ + F +M + PDI TYN L+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
GLC +G+ +KA + +++ K + + T++ +I G C E A+ ++ S++ G P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 405 NESTFGMLISVFC 417
+ T+ ++S C
Sbjct: 469 DIVTYTTMMSGLC 481
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 165/325 (50%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+M + G+ P + + ++ + R A++ +M P++ N +I + CK+
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
+ A + ++++ G+ P VV++ AL++G CN A ++ S M +++PNV+T++
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
L++ F K GK+ EA +F EM ++ P+ VTY++LING + ++F+ M
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
D+++YN LI G CK + + L +E+ + LV N T++ LI G + ++A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
+ + M G SP+ T+ +L+ C N + + A+ + DM R M D + + G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 451 LSRCGRKRLALELCSEMEAKRLLPE 475
+ + G+ A L + K L P+
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPD 469
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 158/342 (46%), Gaps = 25/342 (7%)
Query: 79 LLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFK---- 134
L T N F I R+ I NV + + L + L S R D++ L+ D + K
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYT-ALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 135 ---TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSL-LQLRRAEVALAF 183
TY+ L K+ +A F M P + + ++ ++ L L R E F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
+ + C++ +V + N +I +CK+ + ++ +M GL V++N LI G+
Sbjct: 319 DLMVSKGCLA-DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
G + A + S M + +SP++ T+N L+ G C G+L +A +F +M+ + + VT
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
Y T+I G + G E LF + +KPDI+TY ++ GLC G + L ++
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
++ L+ N T S + + ++ + M S GY+P+
Sbjct: 498 QEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAPS 531
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 166/344 (48%), Gaps = 5/344 (1%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
++F+ + + + A F M+ G P + + N+ ++ L R A
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M I+PNV T N +I A+ K G L A + E+M + P +++N LI+G+C
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A +M M + PN+ T+NTLINGFCK ++ + +F EM + NTVTY T
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
+I G+ Q G+C++ +F++M N+V DI+TY+ L+ GLC GK A + K L K
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ N ++ +I G C A+ ++ S+ P+ T+ +IS C A
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 427 QVLRDMLDRSMTPDSGILSALYNG-LSRCGRKRLALELCSEMEA 469
+ R M + P+SG + L L C R A EL EM +
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA-ELIKEMRS 598
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 183/404 (45%), Gaps = 23/404 (5%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVF 129
SH L T+SI ++ + A ++L +++ + TL
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL------------------ 156
Query: 130 DAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRR 189
++ Y + ++ DA +M E G+ P + + L +A A+A +M +
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 190 DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGL 249
P++ T V+ CK GD+ AL L KM+ + VV FN +I C + +
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 250 ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
A+ + + M + PNVVT+N+LIN C G+ +A R+ S M + PN VT+N LI+
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 310 GYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP 369
+ + G +L EEM + + PD +TYN LI G C + +A + K + + +P
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 370 NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
N T++ LI G C E +++R M+ G N T+ +I F + D D A V
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 430 RDMLDRSMTPDSGILSALYNGLSRCGRKRLALELC-----SEME 468
+ M+ + D S L +GL G+ AL + SEME
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 169/333 (50%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTL 199
++L A +M + G+ P + + ++ L+ +R A+A +M P+ +T
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
+I A+ +++M G P +V++ +++G C +G + LAL + + M
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
R+ NVV FNT+I+ CK + A +F+EM+ + PN VTYN+LIN G
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
RL M ++ P+++T+NALI K+GK +A L +E+ + ++ P+ T++ LI
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
G C+ N + A Q+++ M S PN T+ LI+ FCK + + V++ R+M R +
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 440 DSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
++ + + G + G A + +M + R+
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 179/372 (48%), Gaps = 35/372 (9%)
Query: 137 ANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
+++ K+ DA F M + P++ N LS++ ++ + E+ ++ +M+ IS ++
Sbjct: 59 SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL--------- 247
YT ++ I +C+ L AL L KM +G P +V+ ++L++GYC+ +
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 248 ------------------GL--------ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGK 281
GL A+ + M P++VT+ T++NG CK G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNA 341
+ A + ++M+ A + N V +NT+I+ + + E + LF EM ++P+++TYN+
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 342 LILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIG 401
LI LC G+ A+ L+ + + + PN TF+ALI A +++ M
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 402 YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLAL 461
P+ T+ +LI+ FC + D A Q+ + M+ + P+ + L NG +C R +
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 462 ELCSEMEAKRLL 473
EL EM + L+
Sbjct: 419 ELFREMSQRGLV 430
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 150/300 (50%)
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
+ + A+ + +M + P++ N ++ A K + E+M+ +G+S + +++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
I+ +C + L LAL + + M P++VT ++L+NG+C ++ +A + +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
P+T T+ TLI+G + L ++M + +PD++TY ++ GLCK G A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV 415
NL+ +++ + N F+ +I C + E A ++ M + G PN T+ LI+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 416 FCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
C + A ++L +ML++ + P+ +AL + + G+ A +L EM + + P+
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 161/343 (46%), Gaps = 31/343 (9%)
Query: 75 THSILLHTLANNRKFKTAH----SILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFD 130
T++ L++ L N ++ A ++L + IN NV + F+AL+ D
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT-----FNALI-------------D 336
Query: 131 AVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM-RR 189
A FK KL +A M + P + N ++ R + A ++ M +
Sbjct: 337 AFFKE----GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 190 DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGL 249
DC+ PN+ T N +I +CK + +E +M GL V++ +I G+ G
Sbjct: 393 DCL-PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 250 ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
A + M + RV +++T++ L++G C GKL A +F ++ + + N YNT+I
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Query: 310 GYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP 369
G + G LF + +KPD++TYN +I GLC ++A +L +++ +D +P
Sbjct: 512 GMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 370 NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
N+ T++ LI + + ++ + M S G+ + ST ++
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
P V +F L C E A + E+ L N S I + + L
Sbjct: 25 PTVPSFFNLCGSGCWERSFASASGDYREI--------------LRNRLSDIIKVDDAVDL 70
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
F +M +++ P I+ +N L+ + K K + +L +++ + + T+S I C
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
R+ A + M +GY P+ T L++ +C ++ AV ++ M++ PD+
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 444 LSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ L +GL + A+ L +M + P+
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 351 KTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFG 410
K A +L ++ K P+ F+ L++ N E + M ++G S + T+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 411 MLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
+ I+ FC+ A+ VL M+ PD LS+L NG R A+ L +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 471 RLLPEGF 477
P+ F
Sbjct: 183 GYKPDTF 189
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 167/321 (52%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTL 199
NK +A RM + G P L + A ++ L + ++AL +M I NV
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
+ VI + CK AL +M++ G+ P V+++++LIS CN G A ++ S M
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
+++PN+VTF+ LI+ F K+GKL +A +++ EM ++ PN TY++LING+ +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
++ E M R P+++TYN LI G CK + K L +E+ + LV N T++ LI
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
G + + A +++ M S+G PN T+ +L+ CKN A+ V + +M P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 440 DSGILSALYNGLSRCGRKRLA 460
D + + G+ + G+ ++
Sbjct: 497 DIYTYNIMIEGMCKAGKWKMG 517
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 171/349 (48%), Gaps = 6/349 (1%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
+ V +T + +L DA F M + P++ + LS++ ++ + ++ ++F +M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
IS N+YT N++I +C+ L AL L KM +G P +V+ N+L++G+C+ +
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
A+ + M P+ VTF TLI+G K EA + M P+ VTY ++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
NG + G+ + + L +M +++ +++ Y+ +I LCK A NL E++ +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
PN T+S+LI+ C A ++ M +PN TF LI F K A ++
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 429 LRDMLDRSMTPDSGILSALYNG---LSRCGRKRLALELCSEMEAKRLLP 474
+M+ RS+ P+ S+L NG L R G + LEL M K LP
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL---MIRKDCLP 391
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 148/298 (49%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A+ + M + P++ + ++ A K + EKM+ +G+S + ++N LI+
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
+C L LAL + M P++VT N+L+NGFC ++ +A + +M P
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+TVT+ TLI+G + L + M + +PD++TY A++ GLCK G T A NL+
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
+++ + N +S +I C + + A ++ M + G PN T+ LIS C
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ A ++L DM++R + P+ SAL + + G+ A +L EM + + P F
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 59/309 (19%)
Query: 66 CNPSSHTLQTHSILLHTLANNRKFKTAHSILRRI----INVNVASSSNTLFDALLCSYRL 121
C P L T+ +++ L A ++L ++ I NV S T+ D+L C YR
Sbjct: 214 CQPD---LVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS-TVIDSL-CKYRH 268
Query: 122 CDSS---------------PLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNA 166
D + + + ++ N + DA+ M E P L + +A
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 167 FLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMG 226
+ + ++ + A Y EM + I PN++T + +I +C L A + LE M
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 227 LSPTVVSFNALISGYC----------------NKGLLGLALKMKSLMGNY---------- 260
P VV++N LI+G+C +GL+G + +L+ +
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 261 ---------RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
V PN++T+N L++G CK GKL +A VF ++ + + P+ TYN +I G
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Query: 312 SQIGNCETG 320
+ G + G
Sbjct: 509 CKAGKWKMG 517
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 215/476 (45%), Gaps = 67/476 (14%)
Query: 46 LLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVA 105
L+K+ D L FF+WV N SH Q+ ++L L R N+NVA
Sbjct: 77 LIKVPAD---GLRFFDWVSN-KGFSHKEQSFFLMLEFLGRAR-------------NLNVA 119
Query: 106 SSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCN 165
N LF S F+++ ++Y N +++ F MK+ G P++ + N
Sbjct: 120 R--NFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFN 177
Query: 166 AFLSSLLQLRRAEVALAFYREMRRDC-ISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
+ LS LL+ R +A + EMRR ++P+ YT N +I +CK+ + A + M+
Sbjct: 178 SLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMEL 237
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKS--LMGNYRVSPNVVTFNTLINGFCKEGKL 282
+P VV++N +I G C G + +A + S L V PNVV++ TL+ G+C + ++
Sbjct: 238 YHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEI 297
Query: 283 HEAYRVFSEMKVANVAPNTVTYNTLINGYSQ-----------IG---------------- 315
EA VF +M + PN VTYNTLI G S+ IG
Sbjct: 298 DEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFN 357
Query: 316 -----NCETG-----MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL--- 362
+C+ G M++F+EM ++ PD +Y+ LI LC + +A L EL
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 363 ----DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
KD P A+ ++ + C +++A +++R + G + ++ LI+ C+
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCR 476
Query: 419 NEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
F A ++L ML R PD L +GL + G LA + M LP
Sbjct: 477 EGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLP 532
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 170/457 (37%), Gaps = 83/457 (18%)
Query: 63 VHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLC 122
+++CNP + T++ ++ L K K AH++L ++ +
Sbjct: 237 LYHCNPD---VVTYNTIIDGLCRAGKVKIAHNVLSGMLK------------------KAT 275
Query: 123 DSSPLV--FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVA 180
D P V + + + Y ++ +A F M G P + N + L + R
Sbjct: 276 DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR---- 331
Query: 181 LAFYREMRRDCI---------SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
Y E++ I +P+ T N++I A+C +G L A++ ++M +M L P
Sbjct: 332 ---YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDS 388
Query: 232 VSFNALISGYCNKG-------LLGLALKMKSLMGNYRVSPNVVTFN-------------- 270
S++ LI C + L + + L+G P +N
Sbjct: 389 ASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQ 448
Query: 271 --------------------TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
TLI G C+EGK AY + M P+ TY LI+G
Sbjct: 449 AEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDG 508
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
+IG + M R+ P T+++++ L K ++ LV + + + N
Sbjct: 509 LLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQN 568
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
+ ++ E+AF I R + GY L+ C+N A ++
Sbjct: 569 IDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEE---LLGYLCENRKLLDAHTLVL 625
Query: 431 DMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
L++S D + + GL + R A L +E+
Sbjct: 626 FCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNEL 662
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 206/430 (47%), Gaps = 25/430 (5%)
Query: 64 HNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALL--CSY-R 120
H C P+S QT L+H+L+ + A +L + + + T D +L C + R
Sbjct: 246 HGCVPNSVIYQT---LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 121 LCDSSPLVFDAVFKTYA--------------NLNKLRDATHTFLRMKEYGFLPTLESCNA 166
+ +++ +V + + +A + ++ A F R+ + P + N
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNT 358
Query: 167 FLSSLLQLRRAEVALAFYREMRRD-CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDM 225
+ + R + A A +M I P+V T N +I Y K G + ALE L M++
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 226 GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
G P V S+ L+ G+C G + A + + M + PN V FN LI+ FCKE ++ EA
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
+F EM P+ T+N+LI+G ++ + + L +M V + +TYN LI
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 346 LCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
+ G+ K+A LV E+ + T+++LI G C ++A ++ M G++P+
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 406 ESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCS 465
+ +LI+ C++ + AV+ ++M+ R TPD ++L NGL R GR L +
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 466 EMEAKRLLPE 475
+++A+ + P+
Sbjct: 659 KLQAEGIPPD 668
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 165/338 (48%), Gaps = 1/338 (0%)
Query: 119 YRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRM-KEYGFLPTLESCNAFLSSLLQLRRA 177
YR+ ++F+ + + +L DA M YG +P + + N+ + +
Sbjct: 346 YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 178 EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
+AL +MR PNVY+ +++ +CK G + A L +M GL P V FN L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
IS +C + + A+++ M P+V TFN+LI+G C+ ++ A + +M V
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
NTVTYNTLIN + + G + +L EM D +TYN+LI GLC+ G+ KA +
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
L +++ +D P+ + + LI G C E A + + M G +P+ TF LI+ C
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
+ + + + R + + PD+ + L + L + G
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 199/464 (42%), Gaps = 52/464 (11%)
Query: 37 LTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSIL 96
+TPF++ + LL+L + S+E F+W + N H+ + +L+ L N +FKT +L
Sbjct: 76 ITPFQL-YKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLL 134
Query: 97 RRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKE-Y 155
++ + + + +F ++ + Y T L M+ Y
Sbjct: 135 IQMKDEGIVFKES------------------LFISIMRDYDKAGFPGQTTRLMLEMRNVY 176
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
PT +S N L L+ +VA + +M I P ++T +V+ A+C ++ A
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236
Query: 216 LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLING 275
L L M G P V + LI + AL++ M P+ TFN +I G
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296
Query: 276 FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ---- 331
CK +++EA ++ + M + AP+ +TY L+NG +IG + LF + + +
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIF 356
Query: 332 ----------------------------VKPDILTYNALILGLCKDGKTKKAANLVKELD 363
+ PD+ TYN+LI G K+G A ++ ++
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
PN +++ L+ G C + A+ + M++ G PN F LIS FCK
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
AV++ R+M + PD ++L +GL + AL L +M
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 175/392 (44%), Gaps = 16/392 (4%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFK 134
T+ L++ L + A + RI + NTL + RL D+ ++ D V
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIF-NTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 135 --------TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV 179
TY +L + A M+ G P + S + +L + +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A EM D + PN N +I A+CK +P A+E +M G P V +FN+LIS
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
G C + AL + M + V N VT+NTLIN F + G++ EA ++ +EM
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+ +TYN+LI G + G + LFE+M R+ P ++ N LI GLC+ G ++A
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
KE+ P+ TF++LI G C E ++R + + G P+ TF L+S CK
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
A +L + ++ P+ S L +
Sbjct: 683 GFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 170/342 (49%), Gaps = 1/342 (0%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C + +++ + KT+ ++ DA MKE G P + N+ + L + +R + A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+F EM + + PN +T I Y ++ + A + +++M++ G+ P V LI+ Y
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C KG + A M + + + T+ L+NG K K+ +A +F EM+ +AP+
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
+Y LING+S++GN + +F+EM + P+++ YN L+ G C+ G+ +KA L+ E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
+ L PNA T+ +I G C + AF+++ M G P+ + L+ C+ D
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
+ A+ + + + +AL N + + G+ L E+
Sbjct: 748 VERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEV 788
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 183/410 (44%), Gaps = 19/410 (4%)
Query: 78 ILLHTLANNRK------FKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPL--VF 129
I+ H A N + FKT +NV+ A L ++++C + PL +
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALK---LKESMICKGLV----PLKYTY 280
Query: 130 DAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRR 189
D + + +L DA + M G + + + LL+ R A+ A EM
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 190 DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL-- 247
I+ Y + IC K G + +A + M GL P ++ +LI GYC + +
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
G L ++ N +SP T+ T++ G C G L AY + EM + PN V Y TL
Sbjct: 401 GYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
I + Q MR+ +EM + PDI YN+LI+GL K + +A + + E+ ++ L
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 368 VPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQ 427
PNA T+ A I+G + A + + M G PN+ LI+ +CK A
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 428 VLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
R M+D+ + D+ + L NGL + + A E+ EM K + P+ F
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 182/383 (47%), Gaps = 43/383 (11%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
Y K+ +A + M + G L ++ ++ L + + + A +REMR I+P+
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
V++ ++I + K G++ +A ++M + GL+P V+ +N L+ G+C G + A ++
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
M + PN VT+ T+I+G+CK G L EA+R+F EMK+ + P++ Y TL++G ++
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 316 NCETGMRLFE---------------------EMGRNQVKPDIL----------------- 337
+ E + +F + G+ ++K ++L
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806
Query: 338 TYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
TYN +I LCK+G + A L ++ NL+P T+++L+ G F ++
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILS-----ALYNGLS 452
+ G P+ + ++I+ F K A+ ++ M ++ D LS AL +G +
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926
Query: 453 RCGRKRLALELCSEMEAKRLLPE 475
+ G +A ++ M + +P+
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPD 949
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 151/329 (45%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
SP + V K + L A + M G P + + + LQ R A+
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
+EM+ I+P+++ N +I K+ + A L +M + GL P ++ A ISGY
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
A K M V PN V LIN +CK+GK+ EA + M + + TY
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 305 NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
L+NG + + +F EM + PD+ +Y LI G K G +KA+++ E+ +
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 365 DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDG 424
+ L PN ++ L+ G C E+A ++ M+ G PN T+ +I +CK+ D
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 425 AVQVLRDMLDRSMTPDSGILSALYNGLSR 453
A ++ +M + + PDS + + L +G R
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 208/485 (42%), Gaps = 57/485 (11%)
Query: 33 LSTSLTPFRVKHILLKLKNDDVLSL-EFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKT 91
LS + P V +L + DD L FFNWV + + L + S L L N F+
Sbjct: 56 LSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEK 115
Query: 92 AHSILRRIINVN--VASSSNTLFDALLCSYRLCDSSP--LVFDAVFKTYANLNKLRDATH 147
A S++ R+I N VA +++ + CS S ++F +F Y + +A
Sbjct: 116 ALSVVERMIERNWPVAEVWSSI---VRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVF 172
Query: 148 TFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYC 207
F +P L C L +LL+ R ++ Y+ M + +V T +M+I A+C
Sbjct: 173 VFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHC 232
Query: 208 KSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVV 267
++G++ + L K + + T+ + G ALK+K M + P
Sbjct: 233 RAGNVQLGKDVLFKTEKEFRTATLN-----VDG---------ALKLKESMICKGLVPLKY 278
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING----------------- 310
T++ LI+G CK +L +A + EM V+ + TY+ LI+G
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 311 ------------------YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
S+ G E LF+ M + + P Y +LI G C++
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
++ L+ E+ K N+V + T+ ++ G C + + A+ I + M + G PN + L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
I F +N F A++VL++M ++ + PD ++L GLS+ R A EM L
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 473 LPEGF 477
P F
Sbjct: 519 KPNAF 523
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 185/418 (44%), Gaps = 19/418 (4%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNT---LFDALLCSYRLCDSS------ 125
T+ +L+ L ++ + A S+L + ++ V+ ++T L D LL R D++
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL-KGRNADAAKGLVHE 337
Query: 126 ---------PLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRR 176
P ++D + + A F M G +P ++ + + + +
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 177 AEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNA 236
EM++ I + YT V+ C SGDL A +++M G P VV +
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 237 LISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
LI + G A+++ M ++P++ +N+LI G K ++ EA EM
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
+ PN TY I+GY + + + +EM V P+ + LI CK GK +A
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
+ + + ++ +A T++ L+ G + + A +I+R M G +P+ ++G+LI+ F
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
K + A + +M++ +TP+ I + L G R G A EL EM K L P
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 10/265 (3%)
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+ Y L +A F MK G +P + +L E A+ + ++ C
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLS----PTVVSFNALISGYCNKGLL 247
S N +I K G E L ++ D P V++N +I C +G L
Sbjct: 763 ASSTA-PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
A ++ M N + P V+T+ +L+NG+ K G+ E + VF E A + P+ + Y+ +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 308 INGYSQIGNCETGMRLFEEM-GRNQV----KPDILTYNALILGLCKDGKTKKAANLVKEL 362
IN + + G + L ++M +N V K I T AL+ G K G+ + A +++ +
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Query: 363 DKDNLVPNASTFSALITGQCVRNNS 387
+ +P+++T LI C+ +N
Sbjct: 942 VRLQYIPDSATVIELINESCISSNQ 966
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 157/328 (47%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+M + GF P++ + + L+ Q R + A++ M PNV N VI CK+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
DL ALE M+ G+ V++N LISG N G A ++ M ++ PNV+ F
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
LI+ F KEG L EA ++ EM +V PN TYN+LING+ G +F+ M
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
PD++TYN LI G CK + + L E+ LV +A T++ LI G C A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
+++ M G SP+ T+ +L+ C N + A+ ++ D+ M D + + G
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 451 LSRCGRKRLALELCSEMEAKRLLPEGFG 478
L R + + A L + K + P+
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 159/317 (50%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
++++ V L +A F M++ G + N +S L R A R+
Sbjct: 185 VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 244
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M + I PNV +I + K G+L A ++M + P V ++N+LI+G+C G
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
LG A M LM + P+VVT+NTLI GFCK ++ + ++F EM + + TYNT
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI+GY Q G ++F M V PDI+TYN L+ LC +GK +KA +V++L K
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ + T++ +I G C + + A+ ++RS+T G P+ + +IS C+ A
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 427 QVLRDMLDRSMTPDSGI 443
++ R M + P I
Sbjct: 485 KLCRRMKEDGFMPSERI 501
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 173/327 (52%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
K DA F M + +P++ L+ + ++ + ++ + Y +M IS ++Y+
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++I +C+ L AL L KM +G P++V+ +L++G+C A+ + M +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
PNVV +NT+ING CK L+ A VF M+ + + VTYNTLI+G S G
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
RL +M + ++ P+++ + ALI K+G +A NL KE+ + ++VPN T+++LI G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C+ A ++ M S G P+ T+ LI+ FCK++ + +++ +M + + D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 441 SGILSALYNGLSRCGRKRLALELCSEM 467
+ + L +G + G+ +A ++ + M
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 146/286 (51%)
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
+ + ++ + +N + DA M + P + A + + ++ A
Sbjct: 217 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 276
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
Y+EM R + PNV+T N +I +C G L A + M G P VV++N LI+G+C
Sbjct: 277 YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
+ +K+ M + + T+NTLI+G+C+ GKL+ A +VF+ M V+P+ VT
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
YN L++ G E + + E++ ++++ DI+TYN +I GLC+ K K+A L + L
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
+ + P+A + +I+G C + A ++ R M G+ P+E +
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 136/298 (45%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A + + EM + P++ V+ K + KM+++G+S + SF LI
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
+C L LAL + M P++VT +L+NGFC+ + EA + M P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
N V YNT+ING + + + +F M + ++ D +TYN LI GL G+ AA L+
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
+++ K + PN F+ALI N A +Y+ M PN T+ LI+ FC +
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
A + M+ + PD + L G + R ++L EM + L+ + F
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 4/219 (1%)
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNM 201
L DA + F M G P + + N ++ + +R E + + EM + + +T N
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYR 261
+I YC++G L A + +M D G+SP +V++N L+ CN G + AL M +
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGM 321
+ +++T+N +I G C+ KL EA+ +F + V P+ + Y T+I+G + G
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 322 RLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
+L M + P Y+ + +D T +A L+K
Sbjct: 485 KLCRRMKEDGFMPSERIYDETL----RDHYTSLSAELIK 519
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%)
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
K +A+ +F EM + P+ V + ++ +++ + + L+ +M + D+ ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
LI C+ + A L+ ++ K P+ T +L+ G C N + A + SM
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
G+ PN + +I+ CKN D + A++V M + + D+ + L +GLS GR A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 461 LELCSEMEAKRLLP 474
L +M +++ P
Sbjct: 239 ARLLRDMVKRKIDP 252
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 176/348 (50%), Gaps = 3/348 (0%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL-AFYREM 187
+ ++ +AN + R+A + F +M+E G PTL + N L+ ++ + + +M
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 188 RRDCISPNVYTLNMVICAYCKSGDL-PRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
+ D I+P+ YT N +I CK G L A + E+MK G S V++NAL+ Y
Sbjct: 271 KSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
A+K+ + M SP++VT+N+LI+ + ++G L EA + ++M P+ TY T
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
L++G+ + G E+ M +FEEM KP+I T+NA I GK + + E++
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
L P+ T++ L+ +++ M G+ P TF LIS + + F+ A+
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
V R MLD +TPD + + L+R G + ++ +EME R P
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 175/395 (44%), Gaps = 16/395 (4%)
Query: 92 AHSILRRIINVNVASSS-----NTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDAT 146
+LR +I N S + LF+ S L F + + A
Sbjct: 99 GQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAF 158
Query: 147 HTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAY 206
F++ K+Y + +S L + R A + ++ D S +VY+ +I A+
Sbjct: 159 DWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAF 218
Query: 207 CKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG-----LLGLALKMKSLMGNYR 261
SG A+ +KM++ G PT++++N +++ + G + L KMKS
Sbjct: 219 ANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS----DG 274
Query: 262 VSPNVVTFNTLINGFCKEGKLH-EAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
++P+ T+NTLI CK G LH EA +VF EMK A + + VTYN L++ Y + +
Sbjct: 275 IAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
M++ EM N P I+TYN+LI +DG +A L ++ + P+ T++ L++G
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
E A I+ M + G PN TF I ++ F +++ ++ ++PD
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ L + G + EM+ +PE
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 153/333 (45%)
Query: 143 RDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMV 202
++A F MK GF + NA L + R + A+ EM + SP++ T N +
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 203 ICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRV 262
I AY + G L A+E +M + G P V ++ L+SG+ G + A+ + M N
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 263 SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMR 322
PN+ TFN I + GK E ++F E+ V ++P+ VT+NTL+ + Q G
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 323 LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC 382
+F+EM R P+ T+N LI + G ++A + + + + P+ ST++ ++
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 383 VRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSG 442
E++ ++ M PNE T+ L+ + ++ + ++ + P +
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 443 ILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+L L S+C A SE++ + P+
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 171/386 (44%), Gaps = 35/386 (9%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
S + ++++ YA L +A +M E G P + + LS + + E A++ +
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
EMR PN+ T N I Y G ++ +++ GLSP +V++N L++ +
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
G+ + M P TFNTLI+ + + G +A V+ M A V P+ TY
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527
Query: 305 NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALI--------LGLCKD------- 349
NT++ ++ G E ++ EM + KP+ LTY +L+ +GL
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 350 GKTKKAANLVK--------------------ELDKDNLVPNASTFSALITGQCVRNNSER 389
G + A L+K EL + P+ +T +++++ R +
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 390 AFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYN 449
A + M G++P+ +T+ L+ + ++ DF + ++LR++L + + PD + +
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 707
Query: 450 GLSRCGRKRLALELCSEMEAKRLLPE 475
R R R A + SEM ++P+
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPD 733
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 175/404 (43%), Gaps = 19/404 (4%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY--------------- 119
T++ LL K ++A SI + N + T F+A + Y
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT-FNAFIKMYGNRGKFTEMMKIFDE 444
Query: 120 -RLCDSSP--LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRR 176
+C SP + ++ + + + + F MK GF+P E+ N +S+ +
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 177 AEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNA 236
E A+ YR M ++P++ T N V+ A + G ++ + L +M+D P +++ +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 237 LISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
L+ Y N +GL + + + + P V TL+ K L EA R FSE+K
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
+P+ T N++++ Y + + + M P + TYN+L+ + K+
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
+++E+ + P+ +++ +I C A +I+ M + G P+ T+ I +
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
+ F+ A+ V+R M+ P+ +++ +G + RK A
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 174/337 (51%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
K DA F M E LP++ + L ++ +L + E ++ +R + IS ++Y+
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
+I +C+ L AL L KM +G P++V+F +L++G+C+ A+ + +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
PNVV +NT+I+ C++G+++ A V MK + P+ VTYN+LI G
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
R+ +M R + PD++T++ALI K+G+ +A E+ + ++ PN T+++LI G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C+ + A ++ + S G+ PN T+ LI+ +CK + D +++L M + D
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ + LY G + G+ A ++ M + + P+ +
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY 395
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 174/357 (48%), Gaps = 9/357 (2%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
+ S + F ++ + ++N+ +A ++ G+ P + N + SL + + AL
Sbjct: 146 EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALD 205
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
+ M++ I P+V T N +I SG + L M MG+SP V++F+ALI Y
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
+G L A K + M V+PN+VT+N+LING C G L EA +V + + PN V
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
TYNTLINGY + + GM++ M R+ V D TYN L G C+ GK A ++ +
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAF----QIYRSMTSIGYSPNESTFGMLISVFCK 418
+ P+ TF+ L+ G C +A + +S T +G T+ ++I CK
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII----TYNIIIKGLCK 441
Query: 419 NEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR-LLP 474
+ + A + + + ++PD + GL R R A EL +M+ + L+P
Sbjct: 442 ADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 203/458 (44%), Gaps = 63/458 (13%)
Query: 34 STSLTPFRVKHILLKLKNDDVLSLEFFN--WVHNCNPSSHTLQTHSILLHTLANNRKFKT 91
S ++TP +V L++ + D S+ F+ N H + ++ L + KFK
Sbjct: 11 SKNITPSQVIK-LMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKA 69
Query: 92 AHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLR 151
A ++ R+ N S + L ++ + Y +++ D+ F +
Sbjct: 70 AEDLIVRMKIENCVVSEDILL------------------SICRGYGRVHRPFDSLRVFHK 111
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK-SG 210
MK++ P+ ++ L+ L++ + +A FY+ MR + P V +LN++I A C+ G
Sbjct: 112 MKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDG 171
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
+ L+ +M G P ++ LISG C G + A K+ + M +P VVT+
Sbjct: 172 TVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
+LING C + EA R EMK + PN TY++L++G + G M LFE M
Sbjct: 232 SLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC-------- 382
+P+++TY LI GLCK+ K ++A L+ ++ L P+A + +I+G C
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREA 351
Query: 383 ----------------------VRNNSE-----------RAFQIYRSMTSIGYSPNESTF 409
V+ ++E RAF +Y SM S G S T
Sbjct: 352 ANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETL 411
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
L+ CK +F AVQ++ +++ P G L
Sbjct: 412 ESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ-IG 315
M ++ P+ + T++ +E +L+ A++ + M+ + P + N LI + G
Sbjct: 112 MKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDG 171
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
+ G+++F EM + PD TY LI GLC+ G+ +A L E+ + + P T++
Sbjct: 172 TVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
+LI G C N + A + M S G PN T+ L+ CK+ A+++ M+ R
Sbjct: 232 SLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291
Query: 436 SMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEG 476
P+ + L GL + + + A+EL M + L P+
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA 332
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 7/214 (3%)
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
+F ++ K A + MK+ N + ++ GY ++ +R+F +M
Sbjct: 53 SFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKM 112
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
P Y ++ L ++ + A K + + L P ++ + LI C RN+
Sbjct: 113 KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC-RNDG 171
Query: 388 --ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILS 445
+ +I+ M G P+ T+G LIS C+ D A ++ +M+++ P +
Sbjct: 172 TVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 446 ALYNGLSRCGRKRL--ALELCSEMEAKRLLPEGF 477
+L NGL CG K + A+ EM++K + P F
Sbjct: 232 SLINGL--CGSKNVDEAMRYLEEMKSKGIEPNVF 263
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 212/473 (44%), Gaps = 55/473 (11%)
Query: 30 LHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPS-SHTLQTHSILLHTLANNRK 88
+ P L P R+ ++ + +N D L+L+ F + +P +H T+ +L L+ R
Sbjct: 40 IKPWPQRLFPKRLVSMITQQQNID-LALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARA 98
Query: 89 FKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHT 148
F S++ + N SY +F + + Y + +
Sbjct: 99 FDPVESLMADLRN----------------SYPPIKCGENLFIDLLRNYGLAGRYESSMRI 142
Query: 149 FLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD-CISPNVYTLNMVICAYC 207
FLR+ ++G ++ S N L+ L+Q +R ++ A ++ + I+PN++T N+++ A C
Sbjct: 143 FLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALC 202
Query: 208 KSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVV 267
K D+ A + L+++ MGL P +V++ ++ GY +G + A ++ M + P+
Sbjct: 203 KKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAT 262
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE- 326
T+ L++G+CK G+ EA V +M+ + PN VTY +I + +F+E
Sbjct: 263 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
Query: 327 ----------------------------------MGRNQVKPDILTYNALILGLCKDGKT 352
M +N PD + LI LCK+G+
Sbjct: 323 LERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRV 382
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
+A L E +K + +P+ T++ LI G C + A +++ M PN T+ +L
Sbjct: 383 TEARKLFDEFEKGS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVL 441
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCS 465
I KN + V+VL +ML+ P+ L+ GL + G++ A+++ S
Sbjct: 442 IEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS 494
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 129/264 (48%), Gaps = 1/264 (0%)
Query: 206 YCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-KSLMGNYRVSP 264
Y +G ++ ++ D G+ +V S N L++ L M K+ ++ ++P
Sbjct: 130 YGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITP 189
Query: 265 NVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF 324
N+ T N L+ CK+ + AY+V E+ + PN VTY T++ GY G+ E+ R+
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVL 249
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
EEM PD TY L+ G CK G+ +AA ++ +++K+ + PN T+ +I C
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGIL 444
S A ++ M + P+ S +I C++ D A + R ML + PD+ +L
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 445 SALYNGLSRCGRKRLALELCSEME 468
S L + L + GR A +L E E
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEFE 393
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 166/382 (43%), Gaps = 24/382 (6%)
Query: 71 HTLQTHSILLHTLANNRKFKTAHSILRRI-----INVNVASSSNTLFDALL------CSY 119
++++ + LL+ L N++F H++ + I N+ + N L AL +Y
Sbjct: 153 RSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTC-NLLVKALCKKNDIESAY 211
Query: 120 RLCDSSP--------LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL 171
++ D P + + + Y + A M + G+ P + +
Sbjct: 212 KVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGY 271
Query: 172 LQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
+L R A +M ++ I PN T ++I A CK A ++M + P
Sbjct: 272 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331
Query: 232 VSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
+I C + A + M P+ +TLI+ CKEG++ EA ++F E
Sbjct: 332 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE 391
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
+ ++ P+ +TYNTLI G + G RL+++M + KP+ TYN LI GL K+G
Sbjct: 392 FEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGN 450
Query: 352 TKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGM 411
K+ +++E+ + PN +TF L G E A +I SM + ++ ++ +
Sbjct: 451 VKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV-SMAVMNGKVDKESWEL 509
Query: 412 LISVFCKNEDFDGAVQVLRDML 433
+ F + D V L+++L
Sbjct: 510 FLKKFAG--ELDKGVLPLKELL 529
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 172/356 (48%), Gaps = 2/356 (0%)
Query: 122 CDSSPLV--FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV 179
C +P V + + Y + K+ A MKE G L++ + ++ ++L+
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A A + +M ++ + P+V N +I A+C G++ RA++T+++M+ + PT +F +I
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
GY G + +L++ +M P V TFN LING ++ ++ +A + EM +A V+
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
N TY ++ GY+ +G+ F + + DI TY AL+ CK G+ + A +
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
KE+ N+ N+ ++ LI G R + A + + M G P+ T+ IS K
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
D + A Q + +M + P+ + L G +R AL EM+A + P+
Sbjct: 778 GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 151/348 (43%), Gaps = 41/348 (11%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
+ L +A F M + G P + N +S+ + + A+ +EM++ P
Sbjct: 529 FVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT 588
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI----------------- 238
T +I Y KSGD+ R+LE + M+ G PTV +FN LI
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILD 648
Query: 239 ------------------SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
GY + G G A + + + N + ++ T+ L+ CK G
Sbjct: 649 EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 708
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
++ A V EM N+ N+ YN LI+G+++ G+ L ++M + VKPDI TY
Sbjct: 709 RMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYT 768
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
+ I K G +A ++E++ + PN T++ LI G + E+A Y M ++
Sbjct: 769 SFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAM 828
Query: 401 GYSPNESTFGMLISVFCKNED------FDGAVQVLRDMLDRSMTPDSG 442
G P+++ + L++ + G + + ++M++ + D G
Sbjct: 829 GIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMG 876
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 141/295 (47%)
Query: 178 EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
E A A REM + I + + ++ Y D + L +++K+ G +PTVV++ L
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
I+ Y G + AL++ +M V N+ T++ +INGF K A+ VF +M +
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
P+ + YN +I+ + +GN + ++ +EM + + +P T+ +I G K G +++
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
+ + + VP TF+ LI G + E+A +I MT G S NE T+ ++ +
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
D A + + + + D AL + GR + AL + EM A+ +
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI 725
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 157/341 (46%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
++ ++ YA + +A +MKE G +L + + + + AE A ++ E
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
+R + N +I A+C++ ++ RA + +M++ G+ + ++ ++ GY
Sbjct: 406 KRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADE 465
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
L + + +P VVT+ LIN + K GK+ +A V MK V N TY+ +
Sbjct: 466 KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
ING+ ++ + +FE+M + +KPD++ YN +I C G +A VKE+ K
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 368 VPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQ 427
P TF +I G + R+ +++ M G P TF LI+ + + AV+
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 428 VLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
+L +M ++ + + + G + G A E + ++
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 167/374 (44%), Gaps = 8/374 (2%)
Query: 96 LRRIINVNVASSSNTLFDALLCSY-RLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKE 154
L+RI++ N + + A++ ++ ++ S F + K Y + A TF RM+
Sbjct: 283 LQRILDTNGDN-----WQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRA 337
Query: 155 YGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPR 214
G PT + + + R + AL+ R+M+ + I ++ T ++++ + K+G
Sbjct: 338 RGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEA 397
Query: 215 ALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLIN 274
A ++ K + + + +I +C + A + M + + ++T+++
Sbjct: 398 ADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMD 457
Query: 275 GFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKP 334
G+ + VF +K P VTY LIN Y+++G + + M VK
Sbjct: 458 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 335 DILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIY 394
++ TY+ +I G K A + +++ K+ + P+ ++ +I+ C N +RA Q
Sbjct: 518 NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV 577
Query: 395 RSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR-SMTPDSGILSALYNGLSR 453
+ M + + P TF +I + K+ D +++V DM+ R P + L NGL
Sbjct: 578 KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF-DMMRRCGCVPTVHTFNGLINGLVE 636
Query: 454 CGRKRLALELCSEM 467
+ A+E+ EM
Sbjct: 637 KRQMEKAVEILDEM 650
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%)
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
P+ +++ Y + GD+ RA ET E+M+ G++PT + +LI Y + AL
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
M + ++VT++ ++ GF K G A F E K + N Y +I + Q
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
N E L EM + I Y+ ++ G KK + K L + P T
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
+ LI +A ++ R M G N T+ M+I+ F K +D+ A V DM+
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 434 DRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
M PD + + + + G A++ EM+ R P
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 112/247 (45%)
Query: 229 PTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRV 288
P+ F ++ Y +G + A + M ++P + +LI+ + + EA
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 289 FSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
+MK + + VTY+ ++ G+S+ G+ E F+E R + Y +I C+
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 349 DGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNEST 408
++A LV+E++++ + + + ++ G + + ++ +++ + G++P T
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 409 FGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
+G LI+++ K A++V R M + + + S + NG + A + +M
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 469 AKRLLPE 475
+ + P+
Sbjct: 547 KEGMKPD 553
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 228/495 (46%), Gaps = 53/495 (10%)
Query: 27 WE---NLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQ--THSILLH 81
WE +L L + + P ++ ++D+ + + FF WV C SS+ + LL
Sbjct: 54 WEKNSSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWV--CKHSSYCFDPTQKNQLLK 111
Query: 82 TLANNRKFKTAHSILRRIINVNVASSSNTL-----FDAL--LCSYRLCDSSPLVFDAVFK 134
+ ++ ++ AH+++ +I L FD L + +RL + P + ++
Sbjct: 112 LIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRL--NYP-CYSSLLM 168
Query: 135 TYANLNKLRDATHTFLRMKEYGFLPTL----------------ESCNAFLSSLLQLR--- 175
+ A L+ A T+ RM+ GF+ + E+ F+S +L++
Sbjct: 169 SLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVL 228
Query: 176 ----RAEVALAFYREMR-RDCI------------SPNVYTLNMVICAYCKSGDLPRALET 218
+ L F R + RD + +PN + +++I C+ G L A
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL 288
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
++M + G P+ ++ LI C++GL+ A + M PNV T+ LI+G C+
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR 348
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
+GK+ EA V +M + P+ +TYN LINGY + G L M + KP++ T
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMT 398
+N L+ GLC+ GK KA +L+K + + L P+ +++ LI G C + A+++ SM
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 399 SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKR 458
P+ TF +I+ FCK D A L ML + ++ D + L +G+ + G+ R
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Query: 459 LALELCSEMEAKRLL 473
AL + + R+L
Sbjct: 529 DALFILETLVKMRIL 543
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 196/455 (43%), Gaps = 60/455 (13%)
Query: 49 LKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS 108
LK DV+S E C P+S ++SIL+H L + + A + ++ S+
Sbjct: 250 LKVFDVMSKEV-----TCAPNS---VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 109 NT--LFDALLCSYRLCDSSPLVFDAVF--------KTYANL-------NKLRDATHTFLR 151
T + LC L D + +FD + TY L K+ +A +
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD 211
M + P++ + NA ++ + R A M + PNV T N ++ C+ G
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
+A+ L++M D GLSP +VS+N LI G C +G + A K+ S M + + P+ +TF
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
+IN FCK+GK A M ++ + VT TLI+G ++G + + E + + +
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 332 V-----------------------------------KPDILTYNALILGLCKDGKTKKAA 356
+ P ++TY L+ GL + G +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
+++ + +PN ++ +I G C E A ++ +M G SPN T+ +++ +
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
N D A++ +R M++R + I S+L G
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 160/334 (47%), Gaps = 1/334 (0%)
Query: 142 LRDATHTFLRM-KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
LRDA F M KE P S + + L ++ R E A +M P+ T
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++I A C G + +A ++M G P V ++ LI G C G + A + M
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
R+ P+V+T+N LING+CK+G++ A+ + + M+ PN T+N L+ G ++G
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+ L + M N + PDI++YN LI GLC++G A L+ ++ ++ P+ TF+A+I
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C + ++ A M G S +E T LI CK A+ +L ++ +
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
L+ + + LS+ + + L + ++ L+P
Sbjct: 546 PHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 167/388 (43%), Gaps = 35/388 (9%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C + + + + + +L +A +M E G P+ + + +L + A
Sbjct: 262 CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAF 321
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+ EM PNV+T ++I C+ G + A KM + P+V+++NALI+GY
Sbjct: 322 NLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY 381
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C G + A ++ ++M PNV TFN L+ G C+ GK ++A + M ++P+
Sbjct: 382 CKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
V+YN LI+G + G+ T +L M ++PD LT+ A+I CK GK A+ +
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMT----------------------- 398
+ + + + T + LI G C + A I ++
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561
Query: 399 ------------SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
+G P+ T+ L+ ++ D G+ ++L M P+ +
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTI 621
Query: 447 LYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ NGL + GR A +L S M+ + P
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSP 649
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 142/353 (40%), Gaps = 59/353 (16%)
Query: 138 NLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVY 197
+ K RDA + + L T S N L L + + + LA ++ + + P+V
Sbjct: 523 KVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV 582
Query: 198 TLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM 257
T ++ +SGD+ + LE MK G P V + +I+G C G + A K+ S M
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 258 GNYRVSPNVVTFNTLINGFCKEGKLHEAYR------------------------VFSEMK 293
+ VSPN VT+ ++ G+ GKL A V S+
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKG 702
Query: 294 VANVAPNTVT-----------YNTLINGYSQIGNCETGM------RLFEEMGRNQVKPDI 336
+ N +TV+ N LI+ Q+G C +G+ RL +E GR D
Sbjct: 703 IDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKE-GRTDESND- 760
Query: 337 LTYNALILGL-------------CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
L N L G+ C K K L+ + K VP+ +F +I G
Sbjct: 761 LVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKK 820
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE-DFDGAVQVLRDMLDR 435
++ERA ++ + + +S G+L V C E D G + D++D+
Sbjct: 821 EGDAERARELVMELLTSNGVVEKS--GVLTYVECLMEGDETGDCSEVIDLVDQ 871
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 197/456 (43%), Gaps = 21/456 (4%)
Query: 13 DFVNIAHSHLIHSQWEN-LHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSH 71
D N+ + EN L LS P V +L +LK D ++E+F W H
Sbjct: 38 DICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLK-DVNRAIEYFRWYERRTELPH 96
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
++++ LL +A R F IL + S NT + +L +
Sbjct: 97 CPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVK----------- 145
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
NKLR+ M+++ F P + + + + +++ L +++M+
Sbjct: 146 -------ANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
P V+ +I + K G + AL L++MK L +V +N I + G + +A
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
K + + P+ VT+ ++I CK +L EA +F ++ P T YNT+I GY
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
G + L E P ++ YN ++ L K GK +A + +E+ KD PN
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD-AAPNL 377
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
ST++ LI C + AF++ SM G PN T +++ CK++ D A + +
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
M + TPD +L +GL + GR A ++ +M
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 182/362 (50%), Gaps = 12/362 (3%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
++ + Y + K +A R + G +P++ + N L+ L ++ + + AL + EM
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
++D +PN+ T N++I C++G L A E + M+ GL P V + N ++ C L
Sbjct: 370 KKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 248 GLALKMKSLMGNYRV-SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
A M M +Y+V +P+ +TF +LI+G K G++ +AY+V+ +M ++ N++ Y +
Sbjct: 429 DEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI + G E G +++++M PD+ N + + K G+ +K + +E+
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
VP+A ++S LI G + ++++ SM G + + ++I FCK + A
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL---------LPEGF 477
Q+L +M + P ++ +GL++ R A L E ++KR+ L +GF
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 478 GQ 479
G+
Sbjct: 668 GK 669
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 180/386 (46%), Gaps = 2/386 (0%)
Query: 90 KTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTF 149
+T + ++ R+ + +F+ + Y++C + F ++ + ++ DA +
Sbjct: 413 RTVNIMVDRLCKSQKLDEACAMFEEM--DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 150 LRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKS 209
+M + + + + R E Y++M SP++ LN + K+
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF 269
G+ + E++K P S++ LI G G ++ M + +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
N +I+GFCK GK+++AY++ EMK P VTY ++I+G ++I + LFEE
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
+++ +++ Y++LI G K G+ +A +++EL + L PN T+++L+
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 390 AFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYN 449
A ++SM + +PN+ T+G+LI+ CK F+ A ++M + M P + + + +
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 450 GLSRCGRKRLALELCSEMEAKRLLPE 475
GL++ G A L +A +P+
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPD 796
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 159/353 (45%), Gaps = 1/353 (0%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C ++ +V+ ++ K + N + D + M P L+ N ++ + + E
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
A + E++ P+ + +++I K+G E MK+ G ++N +I G+
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C G + A ++ M P VVT+ ++I+G K +L EAY +F E K + N
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
V Y++LI+G+ ++G + + EE+ + + P++ T+N+L+ L K + +A +
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
+ + PN T+ LI G C +AF ++ M G P+ ++ +IS K +
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
A + PDS +A+ GLS R A L E +R LP
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR-RRGLP 829
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 175/398 (43%), Gaps = 4/398 (1%)
Query: 79 LLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP--LVFDAVFKTY 136
+ L NR+ ++ I+ A + + +LL R S P + ++ +
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY-SLLERQRAKGSIPSVIAYNCILTCL 353
Query: 137 ANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
+ K+ +A F MK+ P L + N + L + + + A M++ + PNV
Sbjct: 354 RKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNV 412
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
T+N+++ CKS L A E+M +P ++F +LI G G + A K+
Sbjct: 413 RTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEK 472
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M + N + + +LI F G+ + ++++ +M N +P+ NT ++ + G
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
E G +FEE+ + PD +Y+ LI GL K G + L + + V + ++
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
+I G C +A+Q+ M + G+ P T+G +I K + D A + + +
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ + I S+L +G + GR A + E+ K L P
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 159/389 (40%), Gaps = 53/389 (13%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFK 134
++ L+ N+ + + H I + +IN N + LL +Y D +FK
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ-----LLNTY---------MDCMFK 529
Query: 135 TYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISP 194
+ F +K F+P S + + L++ A + M+
Sbjct: 530 A----GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
+ N+VI +CK G + +A + LE+MK G PTVV++ ++I G L A +
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRV-------------------------- 288
+ R+ NVV +++LI+GF K G++ EAY +
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 289 ---------FSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTY 339
F MK PN VTY LING ++ ++EM + +KP ++Y
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 340 NALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTS 399
+I GL K G +A L + VP+++ ++A+I G N + AF ++
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 400 IGYSPNESTFGMLISVFCKNEDFDGAVQV 428
G + T +L+ KN+ + A V
Sbjct: 826 RGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 150/350 (42%), Gaps = 3/350 (0%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
P V + ++N+ + + R E P ES N+ L + + R +
Sbjct: 64 QPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCP--ESYNSLLLVMARCRNFDALDQIL 121
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
EM P+V T ++ K+ L + ++ M+ P ++ LI +
Sbjct: 122 GEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV 181
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
+ L + M P V F TLI GF KEG++ A + EMK +++ + V Y
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 241
Query: 305 NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
N I+ + ++G + + F E+ N +KPD +TY ++I LCK + +A + + L+K
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 365 DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDG 424
+ VP ++ +I G + A+ + + G P+ + +++ K D
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 425 AVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
A++V +M + P+ + L + L R G+ A EL M+ L P
Sbjct: 362 ALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 18/320 (5%)
Query: 64 HNCNPSSHTLQTHSILLHTLANNRKFKT---------------AHSIL-RRIINVNVASS 107
NC+P L T+ + K + ++SIL +I A+
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 108 SNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAF 167
+ LF ++ + C ++ V + K+ A MK GF PT+ + +
Sbjct: 571 TYELFYSM--KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 168 LSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGL 227
+ L ++ R + A + E + I NV + +I + K G + A LE++ GL
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 228 SPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYR 287
+P + ++N+L+ + AL M + +PN VT+ LING CK K ++A+
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 288 VFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLC 347
+ EM+ + P+T++Y T+I+G ++ GN LF+ N PD YNA+I GL
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 348 KDGKTKKAANLVKELDKDNL 367
+ A +L +E + L
Sbjct: 809 NGNRAMDAFSLFEETRRRGL 828
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%)
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
+YN+L+ ++ N + ++ EM P + T ++LG K K ++ ++V+ +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
K P S ++ LI N+S+ +++ M +GY P F LI F K
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 423 DGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
D A+ +L +M S+ D + + + + G+ +A + E+EA L P+
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 188/420 (44%), Gaps = 51/420 (12%)
Query: 91 TAHSILRRIINVNVASSSNTLFDALLCSYRLCDSS--PLVFDAVFKTYANLNKLRDATHT 148
T + +L + + + + +FD + + DSS L+ F+ K+++A
Sbjct: 184 TMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRD----GKIQEADRW 239
Query: 149 FLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK 208
M + GF+P +C L++L + A+ ++R+M PN+ +I CK
Sbjct: 240 LTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 299
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-KSLMGNYRVSPNVV 267
G + +A E LE+M G P V + ALI G C +G A ++ L+ + PNV
Sbjct: 300 KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVH 359
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+ ++I G+CKE KL+ A +FS MK + PN TY TLING+ + G+ L M
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM 419
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN- 386
G P+I TYNA I LCK + +A L+ + L + T++ LI QC +N+
Sbjct: 420 GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI 479
Query: 387 -------------------------------------SERAFQIYRSMTSIGYSPNESTF 409
SER FQ+ + S+G P + T+
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL---VVSLGLIPTKETY 536
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
+IS +CK D D A++ +M PDS +L +GL +K + E C EA
Sbjct: 537 TSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC---KKSMVDEACKLYEA 593
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 145/299 (48%), Gaps = 1/299 (0%)
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA-FYREMRRDCISPNVYTLN 200
++ A M G+ P + + A + L + E A F + +R D PNV+T
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
+I YCK L RA +MK+ GL P V ++ LI+G+C G G A ++ +LMG+
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
PN+ T+N I+ CK+ + EAY + ++ + + VTY LI + +
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+ F M + + D+ N LI C+ K K++ L + + L+P T++++I+
Sbjct: 483 LAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 542
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
C + + A + + +M G P+ T+G LIS CK D A ++ M+DR ++P
Sbjct: 543 YCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 183/428 (42%), Gaps = 37/428 (8%)
Query: 17 IAHSHLIHSQWE-NLHPLSTSLTPFRVKHILLKLKNDD--VLSLEFFNWVHNCNPSSHTL 73
+ +H++ S NL + SLT + ++ L ++ +++L FF W H +
Sbjct: 68 LRQNHVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFM 127
Query: 74 QTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVF 133
+ + + +L N + AH ++R +
Sbjct: 128 RLYLVTADSLLANGNLQKAHEVMR---------------------------------CML 154
Query: 134 KTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCIS 193
+ ++ + +L +A + M+ G P+ + N L ++L E A + EM +
Sbjct: 155 RNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVV 214
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
P+ + +++ + G + A L M G P + +++ C GL+ A+
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWY 274
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
M + PN++ F +LI+G CK+G + +A+ + EM PN T+ LI+G +
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
Query: 314 IGNCETGMRLFEEMGRNQV-KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
G E RLF ++ R+ KP++ TY ++I G CK+ K +A L + + L PN +
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
T++ LI G C + RA+++ M G+ PN T+ I CK A ++L
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 454
Query: 433 LDRSMTPD 440
+ D
Sbjct: 455 FSCGLEAD 462
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 1/303 (0%)
Query: 162 ESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEK 221
E L + ++ R A+ +M+ ++P+ T+N V+ + G + A ++
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 222 MKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGK 281
M G+ P S+ ++ G G + A + + M P+ T ++ C+ G
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNA 341
++ A F +M PN + + +LI+G + G+ + + EEM RN KP++ T+ A
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 342 LILGLCKDGKTKKAANL-VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
LI GLCK G T+KA L +K + D PN T++++I G C + RA ++ M
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
G PN +T+ LI+ CK F A +++ M D P+ +A + L + R A
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 461 LEL 463
EL
Sbjct: 448 YEL 450
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 131/266 (49%), Gaps = 1/266 (0%)
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF 269
G L A+ + M++ GL+P+ ++ N ++ GL+ A + M V P+ ++
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
++ G ++GK+ EA R + M P+ T ++ + G + F +M
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
KP+++ + +LI GLCK G K+A +++E+ ++ PN T +ALI G C R +E+
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 390 AFQIYRSMT-SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALY 448
AF+++ + S Y PN T+ +I +CK + + A + M ++ + P+ + L
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 449 NGLSRCGRKRLALELCSEMEAKRLLP 474
NG + G A EL + M + +P
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMP 426
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 124/265 (46%), Gaps = 4/265 (1%)
Query: 173 QLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVV 232
+L RAE+ + M+ + PNV T +I +CK+G RA E + M D G P +
Sbjct: 373 KLNRAEM---LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 429
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
++NA I C K A ++ + + + + VT+ LI CK+ +++A F M
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 489
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
+ N LI + + + RLF+ + + P TY ++I CK+G
Sbjct: 490 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 549
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
A + + VP++ T+ +LI+G C ++ + A ++Y +M G SP E T L
Sbjct: 550 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSM 437
+CK D A+ +L + LD+ +
Sbjct: 610 AYEYCKRNDSANAM-ILLEPLDKKL 633
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 100/209 (47%)
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
SL+ N + ++ F + G+L+EA + +M+ + P+++T N ++ ++
Sbjct: 136 SLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVEL 195
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G E +F+EM V PD +Y +++G +DGK ++A + + + +P+ +T
Sbjct: 196 GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC 255
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD 434
+ ++T C RA +R M +G+ PN F LI CK A ++L +M+
Sbjct: 256 TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 315
Query: 435 RSMTPDSGILSALYNGLSRCGRKRLALEL 463
P+ +AL +GL + G A L
Sbjct: 316 NGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 109/281 (38%), Gaps = 35/281 (12%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
+ ++ Y +KL A F RMKE G P + + ++ + A M
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMG 420
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
+ PN+YT N I + CK P A E L K GL V++ LI C + +
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 249 LAL-----------------------------KMK------SLMGNYRVSPNVVTFNTLI 273
AL KMK L+ + + P T+ ++I
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 274 NGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVK 333
+ +CKEG + A + F MK P++ TY +LI+G + + +L+E M +
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
Query: 334 PDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
P +T L CK + A L++ LDK + T
Sbjct: 601 PPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTL 641
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
++ +S+IG + + +M + P +T N ++ + G + A N+ E+
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 367 LVPNASTFSALITGQCVRNNS-ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
+VP++S++ ++ G C R+ + A + M G+ P+ +T ++++ C+N + A
Sbjct: 213 VVPDSSSYKLMVIG-CFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
+ R M+D P+ ++L +GL + G + A E+ EM
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
++ + + + + N + A F RM + GF + N +++ + ++ + +
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 519
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
++ + + P T +I YCK GD+ AL+ MK G P ++ +LISG C
Sbjct: 520 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 579
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
K ++ A K+ M + +SP VT TL +CK
Sbjct: 580 KKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 198/453 (43%), Gaps = 53/453 (11%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSYRLCDSSP 126
SH L T+SI ++ + A +IL +++ + S N+L + R+ ++
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 127 LVFDAVFKTYA--------------NLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
LV V Y NK +A RM G P L + A ++ L
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 173 QLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVV 232
+ ++AL +M + I +V N +I CK + A + KM+ G+ P V
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPN--------------------------- 265
++N LIS CN G A ++ S M ++P+
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 266 ---------VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
VV +NTLI GFCK ++ E VF EM + NTVTY TLI+G+ Q +
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
C+ +F++M + V PDI+TYN L+ GLC +G + A + + + K ++ + T++
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
+I C E + ++ S++ G PN T+ ++S FC+ + A + +M +
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
P+SG + L R G + + EL EM +
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 164/316 (51%), Gaps = 2/316 (0%)
Query: 162 ESCNAFLS-SLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ C LS +LQ + + A+ + +M + P++ + ++ A K + E
Sbjct: 40 DDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGE 99
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
+M+++G+S + +++ I+ +C + L LAL + M P++VT N+L+NGFC
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
++ EA + +M P+TVT+ TL++G Q + L E M +PD++TY
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
A+I GLCK G+ A NL+ +++K + + ++ +I G C + + AF ++ M +
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
G P+ T+ LIS C + A ++L DML++++ PD +AL + + G+ A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 461 LELCSEM-EAKRLLPE 475
+L EM ++K P+
Sbjct: 340 EKLYDEMVKSKHCFPD 355
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 162/334 (48%), Gaps = 1/334 (0%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
KL DA F M + P++ + LS++ ++ + ++ ++ +M+ IS N+YT +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
+ I +C+ L AL L KM +G P++V+ N+L++G+C+ + A+ + M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
P+ VTF TL++G + K EA + M V P+ VTY +ING + G +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+ L +M + +++ D++ YN +I GLCK A +L +++ + P+ T++ LI+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML-DRSMTP 439
C A ++ M +P+ F LI F K A ++ +M+ + P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 440 DSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
D + L G + R +E+ EM + L+
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 156/330 (47%), Gaps = 1/330 (0%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
++ ++++ + + DA F +M+ G P + + N +S L R A
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM-KDMGLSPTVVSFNALISGY 241
+M I+P++ N +I A+ K G L A + ++M K P VV++N LI G+
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C + +++ M + N VT+ TLI+GF + A VF +M V P+
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
+TYN L++G GN ET + +FE M + +K DI+TY +I LCK GK + +L
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
L + PN T++ +++G C + E A ++ M G PN T+ LI ++ D
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
+ +++++M D+ + N L
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%)
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
R P++V F+ L++ K K + +M+ ++ N TY+ IN + +
Sbjct: 70 RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLA 129
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+ + +M + P I+T N+L+ G C + +A LV ++ + P+ TF+ L+ G
Sbjct: 130 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 189
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
N + A + M G P+ T+G +I+ CK + D A+ +L M + D
Sbjct: 190 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 249
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
I + + +GL + A +L ++ME K + P+ F
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 190/418 (45%), Gaps = 14/418 (3%)
Query: 55 LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDA 114
++ FFNW+ + + Q + +L LA N A+ + R I++ + + L D
Sbjct: 101 IAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDG 160
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
S+ + L+ ++ Y + +F +M GFLP++ +CN L L
Sbjct: 161 ---SFDKLIALKLLDLLLW-VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDS 216
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
R A A Y M I P V T N ++ + K+GDL R + +MK + + V++
Sbjct: 217 RMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTY 276
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVT---FNTLINGFCKEGKLHEAYRVFSE 291
N LI+G+ G + A + G+ R S VT FN LI G+CK+G +A+ V E
Sbjct: 277 NILINGFSKNGKMEEA---RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
M A + P T TYN I G + L M PD+++YN L+ G K GK
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGK 389
Query: 352 TKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGM 411
+A+ L +L ++ P+ T++ LI G C N E A ++ MT+ P+ T+
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 412 LISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
L+ F KN + A +V +ML + + PD + G R G A L EM A
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 181/384 (47%), Gaps = 14/384 (3%)
Query: 89 FKTAHSILRRIINVNVASSSNT--LFDALLCSY-RLCDSSPLV----------FDAVFKT 135
F A + ++N + +++T ++ LC + R+ D+ L+ ++ +
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHG 383
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
Y + K +A+ F ++ P++ + N + L + E A EM I P+
Sbjct: 384 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 443
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-K 254
V T ++ + K+G+L A E ++M G+ P ++ G G A ++ +
Sbjct: 444 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
++ +P++ +N I+G CK G L +A ++ + P+ VTY T+I GY +
Sbjct: 504 EMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEN 563
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G + L++EM R ++ P ++TY LI G K G+ ++A E+ K + PN T
Sbjct: 564 GQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH 623
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD 434
+AL+ G C N + A++ M G PN+ ++ MLIS C E ++ V++ ++MLD
Sbjct: 624 NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
Query: 435 RSMTPDSGILSALYNGLSRCGRKR 458
+ + PD AL+ L + R
Sbjct: 684 KEIEPDGYTHRALFKHLEKDHESR 707
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 160/354 (45%), Gaps = 5/354 (1%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
+P F+ + + Y DA M G PT + N ++ +L R + A
Sbjct: 307 TPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA---- 362
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
RE+ +P+V + N ++ Y K G A + ++ + P++V++N LI G C
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
G L A ++K M + P+V+T+ TL+ GF K G L A V+ EM + P+ Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 305 NTLINGYSQIGNCETGMRLFEEM-GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
T G ++G+ + RL EEM + PD+ YN I GLCK G KA +++
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
+ LVP+ T++ +I G + A +Y M P+ T+ +LI K +
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
A Q +M R + P+ +AL G+ + G A +ME + + P +
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKY 656
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 31/311 (9%)
Query: 205 AYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSP 264
Y K + L + EKM G P+V + N ++ + ++ A + M + + P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 265 NVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF 324
V+TFNT+++ K G L +++ EMK N+ + VTYN LING+S+ G E R
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
+M R+ ++N LI G CK G A + E+ + P ST++ I C
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 385 NNSERAFQIYRSMTSI----------GY---------------------SPNESTFGMLI 413
+ A ++ SM + GY P+ T+ LI
Sbjct: 357 GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
C++ + +GA ++ +M + + PD + L G + G +A E+ EM K +
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 474 PEGFGQEKIAI 484
P+G+ A+
Sbjct: 477 PDGYAYTTRAV 487
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%)
Query: 159 PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET 218
P L N + L ++ A+ F R++ R + P+ T VI Y ++G A
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
++M L P+V+++ LI G+ G L A + + M V PNV+T N L+ G CK
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
G + EAYR +M+ + PN +Y LI+ E ++L++EM +++PD T
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Query: 339 YNALILGLCKDGKTKKAANLVKEL 362
+ AL L KD ++++ L + L
Sbjct: 693 HRALFKHLEKDHESREVEFLERLL 716
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ + V + Y + + A + + M P++ + + + R E A + E
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M++ + PNV T N ++ CK+G++ A L KM++ G+ P S+ LIS C+
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRV 288
+K+ M + + P+ T L K+ HE+ V
Sbjct: 671 WEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD---HESREV 709
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 168/343 (48%), Gaps = 3/343 (0%)
Query: 77 SILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTY 136
++LL + +S+L ++ ++ + LFD L ++ C+ + F+ + +
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHL-RFQSCNDTK-TFNILIRGL 216
Query: 137 ANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCI-SPN 195
+ K A M +G P + + N + + A +++++ + SP+
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
V T +I YCK+G + A L+ M +G+ PT V+FN L+ GY G + A +++
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
M ++ P+VVTF +LI+G+C+ G++ + +R++ EM + PN TY+ LIN
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
L ++ + P YN +I G CK GK +A +V+E++K P+ TF+
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
LI G C++ A I+ M +IG SP++ T L+S K
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 209/459 (45%), Gaps = 34/459 (7%)
Query: 33 LSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTA 92
LS +L PF ++ KL N+ + F+ + H+ T+++L +L A
Sbjct: 63 LSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLA 122
Query: 93 HSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRM 152
+ + + V S +N L L+ S+ A KL AT L+
Sbjct: 123 GQMFECMKSDGV-SPNNRLLGFLVSSF-----------------AEKGKLHFATALLLQS 164
Query: 153 KEYGFLPTLESC----NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK 208
E +E C N+ L++L++L R E A+ + E R + T N++I C
Sbjct: 165 FE------VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-KSLMGNYRVSPNVV 267
G +ALE L M G P +V++N LI G+C L A +M K + SP+VV
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+ ++I+G+CK GK+ EA + +M + P VT+N L++GY++ G T + +M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
PD++T+ +LI G C+ G+ + L +E++ + PNA T+S LI C N
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
+A ++ + S P + +I FCK + A ++ +M + PD + L
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 448 YNGLSRCGRKRLALELCSEMEAKRLLPEGFGQEKIAITS 486
G GR A+ + +M A P +KI ++S
Sbjct: 459 IIGHCMKGRMFEAVSIFHKMVAIGCSP-----DKITVSS 492
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 11/259 (4%)
Query: 118 SYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRA 177
S +C + + ++ Y K+R+A+ M G PT + N + +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 178 EVALAFYREMRRDCIS----PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
A E+R IS P+V T +I YC+ G + + E+M G+ P +
Sbjct: 329 LTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
++ LI+ CN+ L A ++ + + + P +N +I+GFCK GK++EA + EM+
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
P+ +T+ LI G+ G + +F +M PD +T ++L+ L K G K
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Query: 354 KAANL---VKELDKDNLVP 369
+A +L ++ +N+VP
Sbjct: 505 EAYHLNQIARKGQSNNVVP 523
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 168/343 (48%), Gaps = 3/343 (0%)
Query: 77 SILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTY 136
++LL + +S+L ++ ++ + LFD L ++ C+ + F+ + +
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHL-RFQSCNDTK-TFNILIRGL 216
Query: 137 ANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCI-SPN 195
+ K A M +G P + + N + + A +++++ + SP+
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
V T +I YCK+G + A L+ M +G+ PT V+FN L+ GY G + A +++
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
M ++ P+VVTF +LI+G+C+ G++ + +R++ EM + PN TY+ LIN
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
L ++ + P YN +I G CK GK +A +V+E++K P+ TF+
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
LI G C++ A I+ M +IG SP++ T L+S K
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 209/459 (45%), Gaps = 34/459 (7%)
Query: 33 LSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTA 92
LS +L PF ++ KL N+ + F+ + H+ T+++L +L A
Sbjct: 63 LSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLA 122
Query: 93 HSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRM 152
+ + + V S +N L L+ S+ A KL AT L+
Sbjct: 123 GQMFECMKSDGV-SPNNRLLGFLVSSF-----------------AEKGKLHFATALLLQS 164
Query: 153 KEYGFLPTLESC----NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK 208
E +E C N+ L++L++L R E A+ + E R + T N++I C
Sbjct: 165 FE------VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-KSLMGNYRVSPNVV 267
G +ALE L M G P +V++N LI G+C L A +M K + SP+VV
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+ ++I+G+CK GK+ EA + +M + P VT+N L++GY++ G T + +M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
PD++T+ +LI G C+ G+ + L +E++ + PNA T+S LI C N
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
+A ++ + S P + +I FCK + A ++ +M + PD + L
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 448 YNGLSRCGRKRLALELCSEMEAKRLLPEGFGQEKIAITS 486
G GR A+ + +M A P +KI ++S
Sbjct: 459 IIGHCMKGRMFEAVSIFHKMVAIGCSP-----DKITVSS 492
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 11/259 (4%)
Query: 118 SYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRA 177
S +C + + ++ Y K+R+A+ M G PT + N + +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 178 EVALAFYREMRRDCIS----PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
A E+R IS P+V T +I YC+ G + + E+M G+ P +
Sbjct: 329 LTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
++ LI+ CN+ L A ++ + + + P +N +I+GFCK GK++EA + EM+
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
P+ +T+ LI G+ G + +F +M PD +T ++L+ L K G K
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Query: 354 KAANL---VKELDKDNLVP 369
+A +L ++ +N+VP
Sbjct: 505 EAYHLNQIARKGQSNNVVP 523
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 174/344 (50%), Gaps = 1/344 (0%)
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+ K + L + A ++++G P + + NA ++ ++ R + A MR
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
SP+ T N++I + C G L AL+ L ++ PTV+++ LI +G + AL
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
K+ M + + P++ T+NT+I G CKEG + A+ + +++ P+ ++YN L+
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
G E G +L +M + P+++TY+ LI LC+DGK ++A NL+K + + L P+A
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
++ LI C + A + +M S G P+ + +++ CKN D A+++
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ + +P+S + +++ L G K AL + EM + + P+
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 168/348 (48%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
++A+ + +N++ DAT RM+ F P + N + SL + ++AL +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
+ D P V T ++I A G + AL+ +++M GL P + ++N +I G C +G+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ A +M + P+V+++N L+ +GK E ++ ++M PN VTY+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI + G E M L + M + PD +Y+ LI C++G+ A ++ + D
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+P+ ++ ++ C +++A +I+ + +G SPN S++ + S + D A+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
++ +M+ + PD +++ + L R G A EL +M + P
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 153/311 (49%), Gaps = 1/311 (0%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
+L M R +P+V +I + ++P+A+ +E ++ G P V ++NALI+
Sbjct: 108 SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALIN 166
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
G+C + A ++ M + SP+ VT+N +I C GKL A +V +++ N P
Sbjct: 167 GFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQP 226
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+TY LI G + ++L +EM +KPD+ TYN +I G+CK+G +A +V
Sbjct: 227 TVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV 286
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
+ L+ P+ +++ L+ + E ++ M S PN T+ +LI+ C++
Sbjct: 287 RNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRD 346
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQ 479
+ A+ +L+ M ++ +TPD+ L R GR +A+E M + LP+
Sbjct: 347 GKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNY 406
Query: 480 EKIAITSPENG 490
+ T +NG
Sbjct: 407 NTVLATLCKNG 417
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 136/258 (52%)
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
G P + S N L +LL + E +M + PNV T +++I C+ G + A
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 216 LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLING 275
+ L+ MK+ GL+P S++ LI+ +C +G L +A++ M + P++V +NT++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 276 FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
CK GK +A +F ++ +PN+ +YNT+ + G+ + + EM N + PD
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472
Query: 336 ILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYR 395
+TYN++I LC++G +A L+ ++ P+ T++ ++ G C + E A +
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 396 SMTSIGYSPNESTFGMLI 413
SM G PNE+T+ +LI
Sbjct: 533 SMVGNGCRPNETTYTVLI 550
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 139/300 (46%), Gaps = 21/300 (7%)
Query: 63 VHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLC 122
+ C P + +++ILL L N K++ ++ ++ + C
Sbjct: 291 LKGCEPD---VISYNILLRALLNQGKWEEGEKLMTKMFSEK------------------C 329
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
D + + + + T K+ +A + MKE G P S + +++ + R +VA+
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
F M D P++ N V+ CK+G +ALE K+ ++G SP S+N + S
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
+ G AL M M + + P+ +T+N++I+ C+EG + EA+ + +M+ P+ V
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
TYN ++ G+ + E + + E M N +P+ TY LI G+ G +A L +L
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 129/259 (49%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C+ + ++ + + N K + +M P + + + +++L + + E A+
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+ M+ ++P+ Y+ + +I A+C+ G L A+E LE M G P +V++N +++
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C G AL++ +G SPN ++NT+ + G A + EM + P+
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
+TYN++I+ + G + L +M + P ++TYN ++LG CK + + A N+++
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Query: 362 LDKDNLVPNASTFSALITG 380
+ + PN +T++ LI G
Sbjct: 534 MVGNGCRPNETTYTVLIEG 552
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 48/332 (14%)
Query: 1 MRRNIRFSGTDLDFVN---IAHSHLIHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSL 57
M RN+ G + D ++ + + L +WE L T +
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM-------------------- 324
Query: 58 EFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLC 117
+ C+P+ + T+SIL+ TL + K + A ++L+ + + + +
Sbjct: 325 ----FSEKCDPN---VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS------- 370
Query: 118 SYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRA 177
+D + + +L A M G LP + + N L++L + +A
Sbjct: 371 -----------YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 178 EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
+ AL + ++ SPN + N + A SGD RAL + +M G+ P +++N++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
IS C +G++ A ++ M + P+VVT+N ++ GFCK ++ +A V M
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
PN TY LI G G M L ++ R
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
GN + L E M R PD++ LI G KA +++ L+K P+ +
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAY 161
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD 434
+ALI G C N + A ++ M S +SP+ T+ ++I C D A++VL +L
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 435 RSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ P + L G AL+L EM ++ L P+ F
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 20/420 (4%)
Query: 68 PSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCD---- 123
PSS +L ++LL L ++F+ ++ I+ + S A+ + +L D
Sbjct: 142 PSSDSL---TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 124 -------------SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSS 170
S +++ + ++ DA F M LP+L + N +
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 171 LLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT 230
+ E + M+ D I P++ T N ++ K+G + A L++MKD+G P
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 231 VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS 290
+F+ L GY + AL + + V N T + L+N CKEGK+ +A +
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
+ PN V YNT+I+GY + G+ E M + +KPD L YN LI C+ G
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 351 KTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFG 410
+ + A V ++ + P+ T++ LI G + ++ F I + M G PN ++G
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 411 MLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
LI+ CK A V RDM DR ++P I + L +G G+ A EM K
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 168/353 (47%), Gaps = 2/353 (0%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
+ S + F+ + K + DA + MK+ GF+P + + +AE AL
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
Y + N YT ++++ A CK G + +A E L + GL P V +N +I GYC
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 243 NKG-LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
KG L+G +K+++ M + P+ + +N LI FC+ G++ A + ++MK+ V+P+
Sbjct: 401 RKGDLVGARMKIEA-MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
TYN LI GY + + + +EM N P++++Y LI LCK K +A + ++
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
++ + P ++ LI G C + E AF+ + M G N T+ LI
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
A +L ++ + + PD ++L +G G + + L EM+ + P
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 165/356 (46%), Gaps = 4/356 (1%)
Query: 119 YRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAE 178
Y DS L+ D + KT + R + FL + E F P+ + + ++L
Sbjct: 141 YPSSDSLTLLLDHLVKT----KQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG 196
Query: 179 VALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI 238
L + M+ D I P+V+ N++I CK + A + ++M L P+++++N LI
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
GYC G + K++ M + P+++TFNTL+ G K G + +A V EMK
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
P+ T++ L +GYS E + ++E + VK + T + L+ LCK+GK +KA +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 359 VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
+ LVPN ++ +I G C + + A +M G P+ + LI FC+
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 419 NEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ + A + + M + ++P + L G R ++ EME +P
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 193/446 (43%), Gaps = 48/446 (10%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDAL-----LCSYRL----- 121
T SILL+ L K + A IL R + + + NT+ D L R+
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 122 ----CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRA 177
L ++ + + + L ++ +A +MK G P++E+ N + +
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 178 EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
+ +EM + PNV + +I CK L A M+D G+SP V +N L
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
I G C+KG + A + M + N+VT+NTLI+G GKL EA + E+ +
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKP----------------------- 334
P+ TYN+LI+GY GN + + L+EEM R+ +KP
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERL 655
Query: 335 --------DILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
D+L YN ++ G +KA NL K++ + ++ + +T+++LI GQ
Sbjct: 656 FGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
+ M + P T+ +++ C+ +D+ A R+M ++ D I +
Sbjct: 716 LCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNE 775
Query: 447 LYNGLSRCGRKRLALELCSEMEAKRL 472
L +GL R + A + SEM + L
Sbjct: 776 LVSGLKEEWRSKEAEIVISEMNGRML 801
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 176/382 (46%), Gaps = 30/382 (7%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFK 134
T SIL ++N K + A + A S +A CS ++ +A+ K
Sbjct: 321 TFSILFDGYSSNEKAEAALGV------YETAVDSGVKMNAYTCS--------ILLNALCK 366
Query: 135 TYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYR--EMRRDCI 192
K+ A R G +P N + R+ ++ A + M + +
Sbjct: 367 E----GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC--RKGDLVGARMKIEAMEKQGM 420
Query: 193 SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK 252
P+ N +I +C+ G++ A + + KMK G+SP+V ++N LI GY K
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
+ M + PNVV++ TLIN CK KL EA V +M+ V+P YN LI+G
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
G E R +EM + ++ +++TYN LI GL GK +A +L+ E+ + L P+
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
T+++LI+G N +R +Y M G P T+ +LIS+ C E + ++ +M
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-CTKEGIELTERLFGEM 659
Query: 433 LDRSMTPDSGILSALYNGLSRC 454
S+ PD +YNG+ C
Sbjct: 660 ---SLKPD----LLVYNGVLHC 674
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 175/399 (43%), Gaps = 40/399 (10%)
Query: 80 LHTLANNRKFKTAHSILRRIINVNVA--SSSNTLFDAL-LCSYRLCDSSPLVFDAVFKTY 136
L L + +TA +L ++ + +S LF A L S L + +V
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNE 121
Query: 137 ANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
+ + + +A F ++ G P+ +S L L++ ++ V + + + P+
Sbjct: 122 SKM--ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSK 179
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
+ I A K D+ + LE +MK
Sbjct: 180 FMYGKAIQAAVKLSDVGKGLELFNRMK--------------------------------- 206
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
+ R+ P+V +N LI+G CK ++++A ++F EM + P+ +TYNTLI+GY + GN
Sbjct: 207 --HDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
E ++ E M + ++P ++T+N L+ GL K G + A N++KE+ VP+A TFS
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
L G +E A +Y + G N T +L++ CK + A ++L + +
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ P+ I + + +G R G A ME + + P+
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD 423
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 77/196 (39%)
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNA 341
+ EA +F ++ + P++ + L++ + + +F + + +P Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 342 LILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIG 401
I K K L + D + P+ ++ LI G C A Q++ M +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 402 YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLAL 461
P+ T+ LI +CK + + + +V M + P + L GL + G A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 462 ELCSEMEAKRLLPEGF 477
+ EM+ +P+ F
Sbjct: 305 NVLKEMKDLGFVPDAF 320
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 167/335 (49%), Gaps = 2/335 (0%)
Query: 131 AVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD 190
+ + Y + K A M + GF + + N L L + A++ REMRR+
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
+ P+V++ N VI +C+ +L +ALE +MK G S ++V++ LI +C G + A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
+ M + ++V + +LI GFC G+L +F E+ +P +TYNTLI G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
+ ++G + +FE M V+P++ TY LI GLC GKTK+A L+ + + + PN
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
A T++ +I C A +I M P+ T+ +L+ C D D A ++L
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 431 DMLDRSMTPDSGILS--ALYNGLSRCGRKRLALEL 463
ML S D ++S AL +GL + R AL++
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 188/406 (46%), Gaps = 24/406 (5%)
Query: 76 HSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVF--DAVF 133
H+ILL L N + A S+LR + N+L P VF + V
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREM-------RRNSLM-------------PDVFSYNTVI 184
Query: 134 KTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCIS 193
+ + +L A MK G +L + + + + + + A+ F +EM+ +
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
++ +I +C G+L R +++ + G SP +++N LI G+C G L A ++
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
M V PNV T+ LI+G C GK EA ++ + M + PN VTYN +IN +
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV--PNA 371
G + + E M + + +PD +TYN L+ GLC G +A+ L+ + KD+ P+
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
+++ALI G C N +A IY + + + T +L++ K D + A+++ +
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ D + +S +A+ +G + G +A L +M L P F
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 172/391 (43%), Gaps = 39/391 (9%)
Query: 94 SILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMK 153
S++R + LFD +L R + ++ + + + L +L++A+ F M
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVL--ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 154 EYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLP 213
E G P + + + L + + + AL M PN T N++I CK G +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 214 RALETLEKMKDM--------------GL-----------------------SPTVVSFNA 236
A+E +E MK GL P V+S+NA
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 237 LISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
LI G C + L AL + L+ + + VT N L+N K G +++A ++ ++ +
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
+ N+ TY +I+G+ + G L +M ++++P + YN L+ LCK+G +A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
L +E+ +DN P+ +F+ +I G + + A + M+ G SP+ T+ LI+ F
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
K D A+ M+D PD+ I ++
Sbjct: 610 LKLGYLDEAISFFDKMVDSGFEPDAHICDSV 640
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 176/383 (45%), Gaps = 17/383 (4%)
Query: 95 ILRRIINVNVASSSNTLFDALLCSYR-LC-DSSPLVFDAVFKTYANLNKLRDATHTFLRM 152
++R+++N V S F R LC DS+P +L++A F +
Sbjct: 19 VVRKLLNPRVYSKLVNAFSETETKLRSLCEDSNP--------------QLKNAVSVFQQA 64
Query: 153 KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDL 212
+ G N ++ L++ R E+A +FYR+M N +L+ ++ Y +
Sbjct: 65 VDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKT 123
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTL 272
A L M G + V + N L+ G C G A+ + M + P+V ++NT+
Sbjct: 124 GFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTV 183
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQV 332
I GFC+ +L +A + +EMK + + + VT+ LI+ + + G + M +EM +
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGL 243
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ 392
+ D++ Y +LI G C G+ + L E+ + P A T++ LI G C + A +
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 393 IYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLS 452
I+ M G PN T+ LI C A+Q+L M+++ P++ + + N L
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 453 RCGRKRLALELCSEMEAKRLLPE 475
+ G A+E+ M+ +R P+
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPD 386
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 164/351 (46%), Gaps = 3/351 (0%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
++F+A+ + L A F +MKE G PT + N + ++ + E +
Sbjct: 390 ILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDM 449
Query: 187 MRRD-CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
M RD + PN T N+++ A+C + A + KM+ G+ P VV+FN L Y G
Sbjct: 450 MLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509
Query: 246 LLGLALKMK-SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
A M M + +V PNV T T++NG+C+EGK+ EA R F MK V PN +
Sbjct: 510 STCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVF 569
Query: 305 NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
N+LI G+ I + + + + M VKPD++T++ L+ G K+ + ++ +
Sbjct: 570 NSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE 629
Query: 365 DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDG 424
+ P+ FS L G E+A QI M G PN + +IS +C +
Sbjct: 630 GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKK 689
Query: 425 AVQVLRDMLD-RSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
A+QV + M ++P+ L G + A EL +ME K ++P
Sbjct: 690 AMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 166/327 (50%), Gaps = 2/327 (0%)
Query: 143 RDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMV 202
++A F + E G P+L + +++L + + L+ ++ ++ + P+ N +
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 203 ICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM-GNYR 261
I A +SG+L +A++ EKMK+ G PT +FN LI GY G L + ++ +M +
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN-CETG 320
+ PN T N L+ +C + K+ EA+ + +M+ V P+ VT+NTL Y++IG+ C
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+ M N+VKP++ T ++ G C++GK ++A + + + PN F++LI G
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
N+ + ++ M G P+ TF L++ + D ++ DML+ + PD
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 441 SGILSALYNGLSRCGRKRLALELCSEM 467
S L G +R G A ++ ++M
Sbjct: 636 IHAFSILAKGYARAGEPEKAEQILNQM 662
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 169/369 (45%), Gaps = 10/369 (2%)
Query: 49 LKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTA---HSILRRIINVNVA 105
LK D +L FN + N + S L + + + TA +++++ +
Sbjct: 385 LKPDTIL----FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL 440
Query: 106 SSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCN 165
S+ L D +L + + + + + + N K+ +A + +M+ YG P + + N
Sbjct: 441 EESSRLLDMMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN 499
Query: 166 AFLSSLLQLRRAEVAL-AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
+ ++ A M + + PNV T ++ YC+ G + AL +MK+
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
+G+ P + FN+LI G+ N + ++ LM + V P+VVTF+TL+N + G +
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
++++M + P+ ++ L GY++ G E ++ +M + V+P+++ Y +I
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679
Query: 345 GLCKDGKTKKAANLVKEL-DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYS 403
G C G+ KKA + K++ L PN +T+ LI G +A ++ + M
Sbjct: 680 GWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVV 739
Query: 404 PNESTFGML 412
P T ++
Sbjct: 740 PTRKTMQLI 748
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 2/317 (0%)
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ S ++ L++ R + A + + + + P++ T ++ A + L +
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
K++ GL P + FNA+I+ G L A+K+ M P TFNTLI G+ K G
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 281 KLHEAYRVFSEM-KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTY 339
KL E+ R+ M + + PN T N L+ + E + +M VKPD++T+
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 340 NALILGLCKDGKTKKAANL-VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMT 398
N L + G T A ++ + + + + PN T ++ G C E A + + M
Sbjct: 499 NTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMK 558
Query: 399 SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKR 458
+G PN F LI F D DG +V+ M + + PD S L N S G +
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK 618
Query: 459 LALELCSEMEAKRLLPE 475
E+ ++M + P+
Sbjct: 619 RCEEIYTDMLEGGIDPD 635
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
P+++T+ TL+ ++ H + S+++ + P+T+ +N +IN S+ GN + M++
Sbjct: 352 PSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 411
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV-PNASTFSALITGQC 382
FE+M + KP T+N LI G K GK ++++ L+ + +D ++ PN T + L+ C
Sbjct: 412 FEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 383 VRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF------CKNEDFDGAVQVLRDMLDRS 436
+ E A+ I M S G P+ TF L + C ED ++ ML
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM-----IIPRMLHNK 526
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ P+ + NG G+ AL M+ + P F
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF 567
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 192/462 (41%), Gaps = 49/462 (10%)
Query: 59 FFNW----VHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDA 114
FF W + PS L S++ +L ++ KF A S+L I + AS S L ++
Sbjct: 61 FFQWAQTSIPEAFPSDSPLPLISVV-RSLLSHHKFADAKSLLVSYIRTSDASLS--LCNS 117
Query: 115 LLCSYRLCDSSP--LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
LL P +FD Y + K A F +M P L +CN L L+
Sbjct: 118 LLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177
Query: 173 QLRRA---EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM------- 222
+ + A + +M + +S NV T N+++ YC G L AL LE+M
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVN 237
Query: 223 -----------------------------KDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
K GL P V++N L+ GYC G L A ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
LM V P++ T+N LING C G + E + MK + P+ VTYNTLI+G +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL-DKDNLVPNAS 372
+G +L E+M + VK + +T+N + LCK+ K + VKEL D P+
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
T+ LI + A ++ R M G N T ++ CK D A +L
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 433 LDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
R D L G R + ALE+ EM+ ++ P
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 179/381 (46%), Gaps = 22/381 (5%)
Query: 102 VNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTL 161
V + +N L D LC+Y + + N +R+ MK P +
Sbjct: 298 VELMKQTNVLPD--LCTYNI----------LINGLCNAGSMREGLELMDAMKSLKLQPDV 345
Query: 162 ESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEK 221
+ N + +L + A +M D + N T N+ + CK +++
Sbjct: 346 VTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKE 405
Query: 222 MKDM-GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
+ DM G SP +V+++ LI Y G L AL+M MG + N +T NT+++ CKE
Sbjct: 406 LVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKER 465
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
KL EA+ + + + VTY TLI G+ + E + +++EM + ++ P + T+N
Sbjct: 466 KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
+LI GLC GKT+ A EL + L+P+ STF+++I G C E+AF+ Y
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH 585
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGL--SRCGRKR 458
+ P+ T +L++ CK + A+ +++ + + + YN + + C K+
Sbjct: 586 SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-----EREVDTVTYNTMISAFCKDKK 640
Query: 459 L--ALELCSEMEAKRLLPEGF 477
L A +L SEME K L P+ F
Sbjct: 641 LKEAYDLLSEMEEKGLEPDRF 661
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 5/235 (2%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
+ DA+ K KL +A + + GF+ + + + + E AL + EM
Sbjct: 457 ILDALCKE----RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
++ I+P V T N +I C G A+E +++ + GL P +FN++I GYC +G +
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
A + + + P+ T N L+NG CKEG +A F+ + + +TVTYNT+
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTM 631
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
I+ + + + L EM ++PD TYN+ I L +DGK + L+K+
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 229 PTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK---EGKLHEA 285
P+ F+ +S Y ++G +AL++ M ++ PN++T NTL+ G + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM-GRNQVKPDILTYNALIL 344
VF +M V+ N T+N L+NGY G E + + E M +V PD +TYN ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
+ K G+ L+ ++ K+ LVPN
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPN---------------------------------- 274
Query: 405 NESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELC 464
T+ L+ +CK A Q++ M ++ PD + L NGL G R LEL
Sbjct: 275 -RVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM 333
Query: 465 SEMEAKRLLPE 475
M++ +L P+
Sbjct: 334 DAMKSLKLQPD 344
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 189/411 (45%), Gaps = 31/411 (7%)
Query: 69 SSHTLQTHSILL----HTLANNRKFKTAHSILRRIINVNVASSSNTLFDALL-CSYRLCD 123
SSH + +S+ L +L N + TA IL ++ N F+ALL C R D
Sbjct: 251 SSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMK-NKTPLEAPPFNALLSCLGRNMD 309
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
S +N L L+M E P + + +++L + RR + AL
Sbjct: 310 IS------------RMNDL------VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 184 YREMRR------DCISPNVYTLNMVICAYCKSGDLPRALETLEKMK-DMGLSPTVVSFNA 236
+ +MR + I + N +I CK G L A E L +MK + P V++N
Sbjct: 352 FEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNC 411
Query: 237 LISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
LI GYC G L A ++ S M + PNVVT NT++ G C+ L+ A F +M+
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
V N VTY TLI+ + N E M +E+M PD Y ALI GLC+ + A
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
+V++L + + ++ LI C +NN+E+ +++ M G P+ T+ LIS F
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
K++DF+ +++ M + + P A+ + G AL+L +M
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 166/375 (44%), Gaps = 27/375 (7%)
Query: 75 THSILLHTLANNRKFKTAHSIL-----RRIINVNVASSS----NTLFDALLCSYRL---- 121
T IL++TL +R+ A + +R + NV + NTL D L RL
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 122 -----------CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSS 170
C + + ++ + Y KL A RMKE P + + N +
Sbjct: 391 ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 171 LLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT 230
+ + +A+ F+ +M ++ + NV T +I A C ++ +A+ EKM + G SP
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 231 VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS 290
+ ALISG C A+++ + S +++ +N LI FC + + Y + +
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
+M+ P+++TYNTLI+ + + + E+ R+ E+M + + P + TY A+I C G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 351 KTKKAANLVKELDKDNLV-PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
+ +A L K++ + V PN ++ LI N +A + M PN T+
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 410 GMLISVFCKNEDFDG 424
L C NE G
Sbjct: 691 NALFK--CLNEKTQG 703
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 140/325 (43%), Gaps = 9/325 (2%)
Query: 153 KEYGFLPTLESCNAFLSSLLQLR--RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
KE F P + + L + + R E +A +SPN L I + CK+
Sbjct: 214 KESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
A + L + FNAL+S + + M ++ P+VVT
Sbjct: 274 RANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVAN------VAPNTVTYNTLINGYSQIGNCETGMRLF 324
LIN CK ++ EA VF +M+ + +++ +NTLI+G ++G + L
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 325 EEMG-RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
M + P+ +TYN LI G C+ GK + A +V + +D + PN T + ++ G C
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
+ A + M G N T+ LI C + + A+ ML+ +PD+ I
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 444 LSALYNGLSRCGRKRLALELCSEME 468
AL +GL + R A+ + +++
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLK 538
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 118/228 (51%), Gaps = 4/228 (1%)
Query: 138 NLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVY 197
+++ + A + + +M E G P + A +S L Q+RR A+ +++ S ++
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 198 TLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM 257
NM+I +C + + E L M+ G P +++N LIS + +M M
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 258 GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV-ANVAPNTVTYNTLINGYSQIGN 316
+ P V T+ +I+ +C G+L EA ++F +M + + V PNTV YN LIN +S++GN
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
+ L EEM V+P++ TYNAL C + KT + L+K +D+
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALF--KCLNEKT-QGETLLKLMDE 712
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 1/207 (0%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C ++ A+ + + DA ++KE GF L + N + AE
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+M ++ P+ T N +I + K D +E+M++ GL PTV ++ A+I Y
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 242 CNKGLLGLALKMKSLMG-NYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
C+ G L ALK+ MG + +V+PN V +N LIN F K G +A + EMK+ V PN
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEM 327
TYN L ++ ET ++L +EM
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEM 713
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 189/411 (45%), Gaps = 31/411 (7%)
Query: 69 SSHTLQTHSILL----HTLANNRKFKTAHSILRRIINVNVASSSNTLFDALL-CSYRLCD 123
SSH + +S+ L +L N + TA IL ++ N F+ALL C R D
Sbjct: 251 SSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMK-NKTPLEAPPFNALLSCLGRNMD 309
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
S +N L L+M E P + + +++L + RR + AL
Sbjct: 310 IS------------RMNDL------VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 184 YREMRR------DCISPNVYTLNMVICAYCKSGDLPRALETLEKMK-DMGLSPTVVSFNA 236
+ +MR + I + N +I CK G L A E L +MK + P V++N
Sbjct: 352 FEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNC 411
Query: 237 LISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
LI GYC G L A ++ S M + PNVVT NT++ G C+ L+ A F +M+
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
V N VTY TLI+ + N E M +E+M PD Y ALI GLC+ + A
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
+V++L + + ++ LI C +NN+E+ +++ M G P+ T+ LIS F
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
K++DF+ +++ M + + P A+ + G AL+L +M
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 182/405 (44%), Gaps = 29/405 (7%)
Query: 75 THSILLHTLANNRKFKTAHSIL-----RRIINVNVASSS----NTLFDALLCSYRL---- 121
T IL++TL +R+ A + +R + NV + NTL D L RL
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 122 -----------CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSS 170
C + + ++ + Y KL A RMKE P + + N +
Sbjct: 391 ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 171 LLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT 230
+ + +A+ F+ +M ++ + NV T +I A C ++ +A+ EKM + G SP
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 231 VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS 290
+ ALISG C A+++ + S +++ +N LI FC + + Y + +
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
+M+ P+++TYNTLI+ + + + E+ R+ E+M + + P + TY A+I C G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 351 KTKKAANLVKELDKDNLV-PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
+ +A L K++ + V PN ++ LI N +A + M PN T+
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 410 GMLISVFCKNEDFDGA--VQVLRDMLDRSMTPDSGILSALYNGLS 452
L C NE G ++++ +M+++S P+ + L LS
Sbjct: 691 NALFK--CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 140/325 (43%), Gaps = 9/325 (2%)
Query: 153 KEYGFLPTLESCNAFLSSLLQLR--RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
KE F P + + L + + R E +A +SPN L I + CK+
Sbjct: 214 KESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
A + L + FNAL+S + + M ++ P+VVT
Sbjct: 274 RANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVAN------VAPNTVTYNTLINGYSQIGNCETGMRLF 324
LIN CK ++ EA VF +M+ + +++ +NTLI+G ++G + L
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 325 EEMG-RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
M + P+ +TYN LI G C+ GK + A +V + +D + PN T + ++ G C
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
+ A + M G N T+ LI C + + A+ ML+ +PD+ I
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 444 LSALYNGLSRCGRKRLALELCSEME 468
AL +GL + R A+ + +++
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLK 538
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 159/325 (48%), Gaps = 7/325 (2%)
Query: 150 LRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRR------DCISPNVYTLNMVI 203
L+M E P + + +++L + RR + AL + +MR + I + N +I
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLI 377
Query: 204 CAYCKSGDLPRALETLEKMK-DMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRV 262
CK G L A E L +MK + +P V++N LI GYC G L A ++ S M +
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 263 SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMR 322
PNVVT NT++ G C+ L+ A F +M+ V N VTY TLI+ + N E M
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 323 LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC 382
+E+M PD Y ALI GLC+ + A +V++L + + ++ LI C
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 383 VRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSG 442
+NN+E+ +++ M G P+ T+ LIS F K++DF+ +++ M + + P
Sbjct: 558 DKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 443 ILSALYNGLSRCGRKRLALELCSEM 467
A+ + G AL+L +M
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDM 642
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 182/405 (44%), Gaps = 29/405 (7%)
Query: 75 THSILLHTLANNRKFKTAHSIL-----RRIINVNVASSS----NTLFDALLCSYRL---- 121
T IL++TL +R+ A + +R + NV + NTL D L RL
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 122 -----------CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSS 170
C + + ++ + Y KL A RMKE P + + N +
Sbjct: 391 ELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 171 LLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT 230
+ + +A+ F+ +M ++ + NV T +I A C ++ +A+ EKM + G SP
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 231 VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS 290
+ ALISG C A+++ + S +++ +N LI FC + + Y + +
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLT 570
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
+M+ P+++TYNTLI+ + + + E+ R+ E+M + + P + TY A+I C G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 351 KTKKAANLVKELDKDNLV-PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
+ +A L K++ + V PN ++ LI N +A + M PN T+
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 410 GMLISVFCKNEDFDGA--VQVLRDMLDRSMTPDSGILSALYNGLS 452
L C NE G ++++ +M+++S P+ + L LS
Sbjct: 691 NALFK--CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 140/325 (43%), Gaps = 9/325 (2%)
Query: 153 KEYGFLPTLESCNAFLSSLLQLR--RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
KE F P + + L + + R E +A +SPN L I + CK+
Sbjct: 214 KESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
A + L + FNAL+S + + M ++ P+VVT
Sbjct: 274 RANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVAN------VAPNTVTYNTLINGYSQIGNCETGMRLF 324
LIN CK ++ EA VF +M+ + +++ +NTLI+G ++G + L
Sbjct: 334 ILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 325 EEMG-RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
M + P+ +TYN LI G C+ GK + A +V + +D + PN T + ++ G C
Sbjct: 394 VRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
+ A + M G N T+ LI C + + A+ ML+ +PD+ I
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 444 LSALYNGLSRCGRKRLALELCSEME 468
AL +GL + R A+ + +++
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLK 538
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 204/452 (45%), Gaps = 52/452 (11%)
Query: 27 WENLHPLSTSLTPFRVKHIL--LKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLA 84
+E L T L+P + + K + +L+FF + S +L+++ +L+ L
Sbjct: 78 YEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLL 137
Query: 85 NNRKFKTAHSILRRIINVNVASSSNTLFDA------LLCSYRLCDSSPL---VFDAVFKT 135
+ A +L R+IN NV L D+ + S LC + + D + +
Sbjct: 138 DANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEV 197
Query: 136 YANLNKLRD----ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
Y K RD A F + G P+ +CN L+SL++ + + + +
Sbjct: 198 YCTQFK-RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG- 255
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
+SP+VY I A+CK G + A++ KM++ G++P VV+FN +I G G A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
K M + P ++T++ L+ G + ++ +AY V EM PN + YN LI+ +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
+ G+ + + + M + TYN LI G CK+G+ A L+KE
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE---------- 425
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
M SIG++ N+ +F +I + C + FD A++ + +
Sbjct: 426 -------------------------MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
ML R+M+P G+L+ L +GL + G+ ALEL
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 18/319 (5%)
Query: 74 QTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVF 133
+T + LLH L K A I + I+ R C + ++ +
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILG------------------RGCVMDRVSYNTLI 547
Query: 134 KTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCIS 193
KL +A M + G P + + + L + + E A+ F+ + +R+ +
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
P+VYT +++I CK+ E ++M + P V +N LI YC G L +AL++
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
+ M + +SPN T+ +LI G ++ EA +F EM++ + PN Y LI+GY +
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
+G L EM V P+ +TY +I G +DG +A+ L+ E+ + +VP++ T
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 374 FSALITGQCVRNNSERAFQ 392
+ I G + AF+
Sbjct: 788 YKEFIYGYLKQGGVLEAFK 806
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 174/390 (44%), Gaps = 19/390 (4%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINV--NVASSSNTLFDALLCSYRLCDS--- 124
S T T++ L+ N + A +L+ ++++ NV S T LLCS+ + DS
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 125 ----------SPL--VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
SP + + K A + + GF+ + NA L L
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516
Query: 173 QLRRAEVALAFYRE-MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
+ + + A +E + R C+ V + N +I C L A L++M GL P
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRV-SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 232 VSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
+++ LI G N + A++ + P+V T++ +I+G CK + E F E
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
M NV PNTV YN LI Y + G + L E+M + P+ TY +LI G+ +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 352 TKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGM 411
++A L +E+ + L PN ++ALI G + + R M S PN+ T+ +
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 412 LISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
+I + ++ + A ++L +M ++ + PDS
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 160/360 (44%), Gaps = 37/360 (10%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+M E G PTL + + + L + +R A +EM + PNV N +I ++ ++G
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG------------------------- 245
L +A+E + M GLS T ++N LI GYC G
Sbjct: 380 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 246 ----------LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
+ AL+ M +SP TLI+G CK GK +A ++ +
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEE-MGRNQVKPDILTYNALILGLCKDGKTKK 354
+T T N L++G + G + R+ +E +GR V D ++YN LI G C K +
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM-DRVSYNTLISGCCGKKKLDE 558
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
A + E+ K L P+ T+S LI G N E A Q + G P+ T+ ++I
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
CK E + + +M+ +++ P++ + + L R GR +ALEL +M+ K + P
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 172/406 (42%), Gaps = 18/406 (4%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
TL T+SIL+ L ++ A+ +L+ + + +V++
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV------------------IVYNN 370
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+ ++ L A M G T + N + + +A+ A +EM
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
+ N + VIC C AL + +M +SP LISG C G AL
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
++ N + T N L++G C+ GKL EA+R+ E+ + V+YNTLI+G
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
+ +EM + +KPD TY+ LI GL K ++A + ++ ++P+
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
T+S +I G C +E + + M S PN + LI +C++ A+++ D
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
M + ++P+S ++L G+S R A L EM + L P F
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 4/267 (1%)
Query: 163 SCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM 222
S N +S ++ + A F EM + + P+ YT +++IC + A++ +
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 223 KDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKL 282
K G+ P V +++ +I G C + M + V PN V +N LI +C+ G+L
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 283 HEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL 342
A + +MK ++PN+ TY +LI G S I E LFEEM ++P++ Y AL
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 343 ILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
I G K G+ K L++E+ N+ PN T++ +I G N A ++ M G
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 403 SPNESTFGMLISVFCKN----EDFDGA 425
P+ T+ I + K E F G+
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLEAFKGS 808
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 3/183 (1%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+V++ + + Y +L A MK G P + + + + + R E A + E
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
MR + + PNV+ +I Y K G + + L +M + P +++ +I GY G
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ A ++ + M + P+ +T+ I G+ K+G + EA++ E N A +N
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE---ENYAAIIEGWNK 822
Query: 307 LIN 309
LI
Sbjct: 823 LIQ 825
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 4/206 (1%)
Query: 270 NTLINGFCKEGKLHEAY---RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
+ LI +C + K Y VF + + P+ T N L+ + + F+
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
+ + V PD+ + I CK GK ++A L ++++ + PN TF+ +I G +
Sbjct: 252 VCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
+ AF M G P T+ +L+ + + A VL++M + P+ + +
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 447 LYNGLSRCGRKRLALELCSEMEAKRL 472
L + G A+E+ M +K L
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGL 396
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 1/159 (0%)
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
C + +F + + P T N L+ L + + +K + K + P+ F+
Sbjct: 206 GCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFT 264
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
I C E A +++ M G +PN TF +I +D A M++R
Sbjct: 265 TAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 436 SMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
M P S L GL+R R A + EM K P
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 363
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 204/452 (45%), Gaps = 52/452 (11%)
Query: 27 WENLHPLSTSLTPFRVKHIL--LKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLA 84
+E L T L+P + + K + +L+FF + S +L+++ +L+ L
Sbjct: 78 YEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLL 137
Query: 85 NNRKFKTAHSILRRIINVNVASSSNTLFDA------LLCSYRLCDSSPL---VFDAVFKT 135
+ A +L R+IN NV L D+ + S LC + + D + +
Sbjct: 138 DANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEV 197
Query: 136 YANLNKLRD----ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
Y K RD A F + G P+ +CN L+SL++ + + + +
Sbjct: 198 YCTQFK-RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG- 255
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
+SP+VY I A+CK G + A++ KM++ G++P VV+FN +I G G A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
K M + P ++T++ L+ G + ++ +AY V EM PN + YN LI+ +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
+ G+ + + + M + TYN LI G CK+G+ A L+KE
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE---------- 425
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
M SIG++ N+ +F +I + C + FD A++ + +
Sbjct: 426 -------------------------MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
ML R+M+P G+L+ L +GL + G+ ALEL
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 18/319 (5%)
Query: 74 QTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVF 133
+T + LLH L K A I + I+ R C + ++ +
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILG------------------RGCVMDRVSYNTLI 547
Query: 134 KTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCIS 193
KL +A M + G P + + + L + + E A+ F+ + +R+ +
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
P+VYT +++I CK+ E ++M + P V +N LI YC G L +AL++
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
+ M + +SPN T+ +LI G ++ EA +F EM++ + PN Y LI+GY +
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
+G L EM V P+ +TY +I G +DG +A+ L+ E+ + +VP++ T
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 374 FSALITGQCVRNNSERAFQ 392
+ I G + AF+
Sbjct: 788 YKEFIYGYLKQGGVLEAFK 806
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 174/390 (44%), Gaps = 19/390 (4%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINV--NVASSSNTLFDALLCSYRLCDS--- 124
S T T++ L+ N + A +L+ ++++ NV S T LLCS+ + DS
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 125 ----------SPL--VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
SP + + K A + + GF+ + NA L L
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516
Query: 173 QLRRAEVALAFYRE-MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
+ + + A +E + R C+ V + N +I C L A L++M GL P
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRV-SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 232 VSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
+++ LI G N + A++ + P+V T++ +I+G CK + E F E
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
M NV PNTV YN LI Y + G + L E+M + P+ TY +LI G+ +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 352 TKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGM 411
++A L +E+ + L PN ++ALI G + + R M S PN+ T+ +
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 412 LISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
+I + ++ + A ++L +M ++ + PDS
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 160/360 (44%), Gaps = 37/360 (10%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+M E G PTL + + + L + +R A +EM + PNV N +I ++ ++G
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG------------------------- 245
L +A+E + M GLS T ++N LI GYC G
Sbjct: 380 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 246 ----------LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
+ AL+ M +SP TLI+G CK GK +A ++ +
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEE-MGRNQVKPDILTYNALILGLCKDGKTKK 354
+T T N L++G + G + R+ +E +GR V D ++YN LI G C K +
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM-DRVSYNTLISGCCGKKKLDE 558
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
A + E+ K L P+ T+S LI G N E A Q + G P+ T+ ++I
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
CK E + + +M+ +++ P++ + + L R GR +ALEL +M+ K + P
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 172/406 (42%), Gaps = 18/406 (4%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
TL T+SIL+ L ++ A+ +L+ + + +V++
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV------------------IVYNN 370
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+ ++ L A M G T + N + + +A+ A +EM
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
+ N + VIC C AL + +M +SP LISG C G AL
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
++ N + T N L++G C+ GKL EA+R+ E+ + V+YNTLI+G
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
+ +EM + +KPD TY+ LI GL K ++A + ++ ++P+
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
T+S +I G C +E + + M S PN + LI +C++ A+++ D
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
M + ++P+S ++L G+S R A L EM + L P F
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 4/267 (1%)
Query: 163 SCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM 222
S N +S ++ + A F EM + + P+ YT +++IC + A++ +
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 223 KDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKL 282
K G+ P V +++ +I G C + M + V PN V +N LI +C+ G+L
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 283 HEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL 342
A + +MK ++PN+ TY +LI G S I E LFEEM ++P++ Y AL
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 343 ILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
I G K G+ K L++E+ N+ PN T++ +I G N A ++ M G
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 403 SPNESTFGMLISVFCKN----EDFDGA 425
P+ T+ I + K E F G+
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLEAFKGS 808
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 3/183 (1%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+V++ + + Y +L A MK G P + + + + + R E A + E
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
MR + + PNV+ +I Y K G + + L +M + P +++ +I GY G
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ A ++ + M + P+ +T+ I G+ K+G + EA++ E N A +N
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE---ENYAAIIEGWNK 822
Query: 307 LIN 309
LI
Sbjct: 823 LIQ 825
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 4/206 (1%)
Query: 270 NTLINGFCKEGKLHEAY---RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
+ LI +C + K Y VF + + P+ T N L+ + + F+
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
+ + V PD+ + I CK GK ++A L ++++ + PN TF+ +I G +
Sbjct: 252 VCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
+ AF M G P T+ +L+ + + A VL++M + P+ + +
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 447 LYNGLSRCGRKRLALELCSEMEAKRL 472
L + G A+E+ M +K L
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGL 396
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 1/159 (0%)
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
C + +F + + P T N L+ L + + +K + K + P+ F+
Sbjct: 206 GCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFT 264
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
I C E A +++ M G +PN TF +I +D A M++R
Sbjct: 265 TAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 436 SMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
M P S L GL+R R A + EM K P
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 363
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 185/395 (46%), Gaps = 21/395 (5%)
Query: 34 STSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPS-SHTLQTHSILLHTLANNRKFKTA 92
+T TP V +L +L N +L+FF+++ N + H + + + A T
Sbjct: 51 TTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTV 110
Query: 93 HSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRM 152
S++ R+ ++ + S P F V + YA+ K A FL M
Sbjct: 111 WSLIHRMRSLRIGPS------------------PKTFAIVAERYASAGKPDKAVKLFLNM 152
Query: 153 KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDL 212
E+G L S N L L + +R E A +R +R S + T N+++ +C
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR-GRFSVDTVTYNVILNGWCLIKRT 211
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTL 272
P+ALE L++M + G++P + ++N ++ G+ G + A + M +VVT+ T+
Sbjct: 212 PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 271
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQV 332
++GF G++ A VF EM V P+ TYN +I + N E + +FEEM R
Sbjct: 272 VHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY 331
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ 392
+P++ TYN LI GL G+ + L++ ++ + PN T++ +I + E+A
Sbjct: 332 EPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALG 391
Query: 393 IYRSMTSIGYSPNESTFGMLIS-VFCKNEDFDGAV 426
++ M S PN T+ +LIS +F + D V
Sbjct: 392 LFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVV 426
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 168/374 (44%), Gaps = 5/374 (1%)
Query: 104 VASSSNTLF--DALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTL 161
+ SS NT D L S + +P + ++V K N FL ++
Sbjct: 32 ILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDA 91
Query: 162 ESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEK 221
S + + +L + MR I P+ T +V Y +G +A++
Sbjct: 92 SSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLN 151
Query: 222 MKDMGLSPTVVSFNALISGYCNKGLLGLALKM-KSLMGNYRVSPNVVTFNTLINGFCKEG 280
M + G + SFN ++ C + A ++ ++L G R S + VT+N ++NG+C
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRG--RFSVDTVTYNVILNGWCLIK 209
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
+ +A V EM + PN TYNT++ G+ + G F EM + + D++TY
Sbjct: 210 RTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYT 269
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
++ G G+ K+A N+ E+ ++ ++P+ +T++A+I C ++N E A ++ M
Sbjct: 270 TVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
GY PN +T+ +LI +F ++++ M + P+ + + S C A
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 461 LELCSEMEAKRLLP 474
L L +M + LP
Sbjct: 390 LGLFEKMGSGDCLP 403
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 191/442 (43%), Gaps = 22/442 (4%)
Query: 30 LHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKF 89
L+ S L+P ++ +L KL N VL+L F W N HT ++ L+ +L ++F
Sbjct: 85 LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQF 144
Query: 90 KTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTF 149
K S++ + + S F + + YA K+++A F
Sbjct: 145 KLIWSLVDDMKAKKLLSKE-------------------TFALISRRYARARKVKEAIGAF 185
Query: 150 LRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKS 209
+M+E+GF N L +L + R A + +M++ P++ + +++ + +
Sbjct: 186 HKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQE 245
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF 269
+L R E +MKD G P VV++ +I+ +C A++ + M P+ F
Sbjct: 246 LNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIF 305
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
+LING E KL++A F K + TYN L+ Y E + +EM
Sbjct: 306 CSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRL 365
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
V P+ TY+ ++ L + ++K+A + + + + P ST+ ++ C + +
Sbjct: 366 KGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDM 422
Query: 390 AFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYN 449
A +I+ M G P F LI+ C D A + +MLD + P + S L
Sbjct: 423 AIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQ 482
Query: 450 GLSRCGRKRLALELCSEMEAKR 471
L GRK +L +M+ R
Sbjct: 483 TLLDEGRKDKVTDLVVKMDRLR 504
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 154/295 (52%)
Query: 159 PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET 218
P + + N ++ L + + EVA+ F E + + PN + +I AYCKS + A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
L +M + G P +V++ LI G G + A+ MK + + VSP+ +N L++G CK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
G+ A +FSEM N+ P+ Y TLI+G+ + G+ + ++F VK D++
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMT 398
+NA+I G C+ G +A + +++++LVP+ T+S +I G + + A +I+R M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 399 SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSR 453
PN T+ LI+ FC DF A + ++M R + P+ + L L++
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 200/521 (38%), Gaps = 106/521 (20%)
Query: 35 TSLTPF---RVKHILLKLKNDDVLSLE----FFNWVHNCNPSSHTLQTHSILLHTLANNR 87
++PF R++ + + +K D LS E FF+ C S L LA R
Sbjct: 64 VDISPFVFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFAC----------SSFLKLLARYR 113
Query: 88 KFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATH 147
F +L + N NV + L V YA L A
Sbjct: 114 IFNEIEDVLGNLRNENVKLTHEAL------------------SHVLHAYAESGSLSKAVE 155
Query: 148 TFLRMKE-YGFLPTLESCNAFLSSLLQLRRAEVALAFYREM--RRDCIS----------- 193
+ + E Y +P + +CN+ LS L++ RR A Y EM R D +
Sbjct: 156 IYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGM 215
Query: 194 ----------------------PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
PN+ N +I YCK GD+ A +++K G PT+
Sbjct: 216 CNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTL 275
Query: 232 VSFNALISGYCNKGLLGLALKMKS-----------------LMGNYR------------- 261
+F +I+G+C +G + ++ S + YR
Sbjct: 276 ETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW 335
Query: 262 -----VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
P+V T+N LIN CKEGK A E + PN ++Y LI Y +
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+ +L +M KPDI+TY LI GL G A N+ +L + P+A+ ++
Sbjct: 396 YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
L++G C A ++ M P+ + LI F ++ DFD A +V +++
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG 515
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ D +A+ G R G AL + M + L+P+ F
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 181/436 (41%), Gaps = 39/436 (8%)
Query: 58 EFFNWV--HNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRR---------------II 100
E W+ ++C P + T++IL++ L K + A L +I
Sbjct: 331 ESIGWIIANDCKPD---VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLI 387
Query: 101 NVNVASSSNTLFDALLC--SYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFL 158
S + LL + R C + + + + DA + +++ + G
Sbjct: 388 QAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVS 447
Query: 159 PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET 218
P N +S L + R A + EM I P+ Y +I + +SGD A +
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
+ G+ VV NA+I G+C G+L AL + M + P+ T++T+I+G+ K
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
+ + A ++F M+ PN VTY +LING+ G+ + F+EM + P+++T
Sbjct: 568 QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDN-LVPNASTFSALITGQCVRNNSERAF------ 391
Y LI L K+ T + A EL N VPN TF+ L+ G V+ S +
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG-FVKKTSGKVLAEPDGS 686
Query: 392 ---------QIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSG 442
+ + M S G+S + + + + C + A M+ + +PD
Sbjct: 687 NHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPV 746
Query: 443 ILSALYNGLSRCGRKR 458
+A+ +G G +
Sbjct: 747 SFAAILHGFCVVGNSK 762
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 178/429 (41%), Gaps = 75/429 (17%)
Query: 120 RLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV 179
R D SP VFD + + KL D + K+ F +C++FL L + R
Sbjct: 62 RFVDISPFVFDRIQDVEIGV-KLFDWLSS---EKKDEFFSNGFACSSFLKLLARYRIFNE 117
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLS-PTVVSFNALI 238
+R + + L+ V+ AY +SG L +A+E + + ++ S P V++ N+L+
Sbjct: 118 IEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLL 177
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
S LG A K+ M + S + + L+ G C EGK+ ++
Sbjct: 178 SLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCI 237
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
PN V YNT+I GY ++G+ E +F+E+ P + T+ +I G CK+G + L
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 359 VKELDK----------DNLV-------------------------PNASTFSALITGQCV 383
+ E+ + +N++ P+ +T++ LI C
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM----------- 432
E A + G PN ++ LI +CK++++D A ++L M
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417
Query: 433 ------------------------LDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
+DR ++PD+ I + L +GL + GR A L SEM
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 469 AKRLLPEGF 477
+ +LP+ +
Sbjct: 478 DRNILPDAY 486
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 50/248 (20%)
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
+ +V N +I +C+SG L AL + +M + L P +++ +I GY + + A+
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
K+ M + PNVVT+ +LINGFC +G A F EM++ ++ PN VTY TLI
Sbjct: 576 KIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Query: 312 S-QIGNCETGMRLFEEMGRNQVKPDILTYNALILG------------------------- 345
+ + E + +E M N+ P+ +T+N L+ G
Sbjct: 636 AKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFS 695
Query: 346 ------------------------LCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQ 381
LC G K A ++ K P+ +F+A++ G
Sbjct: 696 EFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Query: 382 CVRNNSER 389
CV NS++
Sbjct: 756 CVVGNSKQ 763
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 15/244 (6%)
Query: 130 DAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRR 189
+A+ K + L +A RM E +P + + + ++ + A+ +R M +
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 190 DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG-LLG 248
+ PNV T +I +C GD A ET ++M+ L P VV++ LI + L
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCK----------EGKLHEAYRVFSE----MKV 294
A+ LM + PN VTFN L+ GF K +G H +FSE MK
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKS 703
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
+ + YN+ + G +T ++M + PD +++ A++ G C G +K+
Sbjct: 704 DGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Query: 355 AANL 358
N+
Sbjct: 764 WRNM 767
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 195/430 (45%), Gaps = 22/430 (5%)
Query: 42 VKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIIN 101
V+ +L + KN + FF W +H+L+++ IL+ L ++++F
Sbjct: 71 VEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFA----------- 119
Query: 102 VNVASSSNTLFDALLCS--YRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLP 159
L+D L+ + Y + S VF VF+ Y+ N +A F RM E+G P
Sbjct: 120 --------LLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKP 171
Query: 160 TLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETL 219
++ + L SL + A F+ + + I P+ T ++++ + + D A +
Sbjct: 172 CVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVF 231
Query: 220 EKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKE 279
++M + ++++NAL+ C G + KM MGN + P+ +F I+ +C
Sbjct: 232 DEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDA 291
Query: 280 GKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTY 339
G +H AY+V MK ++ PN T+N +I + + L +EM + PD TY
Sbjct: 292 GDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTY 351
Query: 340 NALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTS 399
N+++ C + +A L+ +D+ +P+ T++ ++ +RA +I+ M+
Sbjct: 352 NSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSE 411
Query: 400 IGYSPNESTFGMLI-SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKR 458
+ P +T+ ++I + K + A + M+D + P S + L N L G+
Sbjct: 412 RKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Query: 459 LALELCSEME 468
+ L +ME
Sbjct: 472 VVDVLAGKME 481
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 2/283 (0%)
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
IS V+ + V AY ++ A +M + G+ P V + L+ C+K + A
Sbjct: 136 ISSKVFWI--VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
+ + + P+ T++ L+ G+ + A +VF EM N + + YN L++
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
+ G+ + G ++F+EMG +KPD ++ I C G A ++ + + +LVPN
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
TF+ +I C + A+ + M G +P+ T+ +++ C + + + A ++L
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR 373
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
M PD + + L R GR A E+ M ++ P
Sbjct: 374 MDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYP 416
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 210/459 (45%), Gaps = 37/459 (8%)
Query: 3 RNIRFSGTDLDFVNIAHSHLIHSQWENLHPLSTSLTPFRVKHILLKLKNDDV-LSLEFFN 61
+ I F + F H + + L + L V+ I+ +L ++ LS+ FF
Sbjct: 20 KEILFGMKKIGFREFLHGY-------HFRGLVSELRHVHVEEIMDELMSESSDLSVWFFK 72
Query: 62 WVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRL 121
+ + H+ + ++ H LA R+FK IL +++ ++R
Sbjct: 73 ELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEE-------------GTFRK 119
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
+S+ LV+D + + L + D+ + +MK+ + +S N S L R +
Sbjct: 120 WESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYN---SVLYHFRETDKMW 176
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
Y+E++ N +T + V+ C+ L A+ L + + P+VVSFN+++SGY
Sbjct: 177 DVYKEIK----DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGY 232
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C G + +A + + P+V + N LING C G + EA + S+M V P++
Sbjct: 233 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 292
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
VTYN L G+ +G + +M + PD++TY L+ G C+ G L+K+
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD 352
Query: 362 L-----DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
+ + ++++P S +++G C + A ++ M + G SP+ + ++I
Sbjct: 353 MLSRGFELNSIIP----CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
CK FD A+ + +M D+ + P+S AL GL + G
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKG 447
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 177/351 (50%), Gaps = 1/351 (0%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
S + F+++ Y L + A F + + G +P++ S N ++ L + AL
Sbjct: 221 SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELA 280
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
+M + + P+ T N++ + G + A E + M D GLSP V+++ L+ G C
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 245 GLLGLALKM-KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
G + + L + K ++ +++ + +++G CK G++ EA +F++MK ++P+ V
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
Y+ +I+G ++G + + L++EM ++ P+ T+ AL+LGLC+ G +A +L+ L
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
+ ++ +I G E A ++++ + G +P+ +TF LI +CK ++
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
A ++L + + P + L + + CG + EL EM+A+ + P
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 150/321 (46%), Gaps = 23/321 (7%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTL 199
++ +A F +MK G P L + + + L +L + ++AL Y EM I PN T
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
++ C+ G L A L+ + G + +V +N +I GY G + AL++ ++
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
++P+V TFN+LI G+CK + EA ++ +K+ +AP+ V+Y TL++ Y+ GN ++
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
L EM + P +TY+ + GLC+ K + ++++E
Sbjct: 557 IDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE------------------ 598
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
E+ Q R M S G P++ T+ +I C+ + GA L M R++
Sbjct: 599 -----RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDA 653
Query: 440 DSGILSALYNGLSRCGRKRLA 460
S + L + L G R A
Sbjct: 654 SSATYNILIDSLCVYGYIRKA 674
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 151/331 (45%), Gaps = 13/331 (3%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
+ + ++ + K + L + A M + G P + + L QL ++ L
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 183 FYREMRRDCISPN-VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
++M N + ++++ CK+G + AL +MK GLSP +V+++ +I G
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C G +AL + M + R+ PN T L+ G C++G L EA + + + +
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
V YN +I+GY++ G E + LF+ + + P + T+N+LI G CK +A ++
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC---K 418
+ L P+ +++ L+ N++ ++ R M + G P T+ ++ C K
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Query: 419 NED---------FDGAVQVLRDMLDRSMTPD 440
+E+ F+ Q LRDM + PD
Sbjct: 589 HENCNHVLRERIFEKCKQGLRDMESEGIPPD 619
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 14/254 (5%)
Query: 178 EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
E AL ++ + I+P+V T N +I YCK+ ++ A + L+ +K GL+P+VVS+ L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE------AYRVFS- 290
+ Y N G +++ M + P VT++ + G C+ G HE R+F
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR-GWKHENCNHVLRERIFEK 603
Query: 291 ------EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
+M+ + P+ +TYNT+I ++ + E M + TYN LI
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
LC G +KA + + L + N+ + ++ LI CV+ + E A +++ + G++
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Query: 405 NESTFGMLISVFCK 418
+ + +I+ C+
Sbjct: 724 SIRDYSAVINRLCR 737
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 100/214 (46%), Gaps = 7/214 (3%)
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M + ++ + ++N+++ F + K+ + Y+ + N TY+T+++G +
Sbjct: 150 MKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQK 202
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
E + + P ++++N+++ G CK G A + + K LVP+ + +
Sbjct: 203 LEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 262
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
LI G C+ + A ++ M G P+ T+ +L F GA +V+RDMLD+
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
++PD + L G + G + L L +M ++
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 288 VFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLC 347
+ +MK N+ +T +YN+++ + + + ++ + TY+ ++ GLC
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH-------TYSTVVDGLC 198
Query: 348 KDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNES 407
+ K + A ++ + ++ P+ +F+++++G C + A + ++ G P+
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258
Query: 408 TFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
+ +LI+ C A+++ DM + PDS + L G G A E+ +M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 468 EAKRLLPE 475
K L P+
Sbjct: 319 LDKGLSPD 326
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 205/449 (45%), Gaps = 23/449 (5%)
Query: 13 DFVNIAHSHLIHSQWENLHPLSTSLTPFRVKHILL-KLKNDDVLS---LEFFNWVHNCNP 68
+FVN ++L H Q +LTP + L K++N + + FNW +
Sbjct: 58 NFVNFLENNLPHHQ---------TLTPQTLLGFLRSKIRNHPLYAHYDFAVFNWAATLDT 108
Query: 69 SSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLV 128
H + + +LA +F + +L + N S+ +F C +
Sbjct: 109 FRHDHDSFLWMSRSLAATHRFDDLYRLLS-FVAANPCPCSSGIFS--------CPELEPI 159
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKE-YGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
F + Y K+ A F MK P + N ++ ++ + AL FY+ M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
++ P+V T N++I YC+S AL+ +MK+ G P VVSFN LI G+ + G +
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
+KM M + T L++G C+EG++ +A + ++ V P+ Y +L
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
+ M + EE+ + P + L+ GL K G+T+KA+ ++++ +
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Query: 368 VPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQ 427
+P++ TF+ L+ C ++S A ++ +S GY P+E+T+ +L+S F K
Sbjct: 400 LPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEV 459
Query: 428 VLRDMLDRSMTPDSGILSALYNGLSRCGR 456
++ +MLD+ M PD + L +GLS G+
Sbjct: 460 LVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 189/419 (45%), Gaps = 26/419 (6%)
Query: 32 PLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKT 91
P S +P RV+ L+ ++D +L+ E F++ H+ +H IL+ L R F
Sbjct: 44 PKSPIGSPTRVQK-LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYF-- 100
Query: 92 AHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPL---VFDAVFKTYANLNKLRDATHT 148
L D +L +R PL +F + K YA T
Sbjct: 101 ------------------NLIDDVLAKHR-SSGYPLTGEIFTYLIKVYAEAKLPEKVLST 141
Query: 149 FLRMKEYGFLPTLESCNAFLSSLLQLR-RAEVALAFYREMRRDCISPNVYTLNMVICAYC 207
F +M E+ F P + N L L+ R + A ++ R + PN + N+++ A+C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 208 KSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVV 267
+ DL A + KM + + P V S+ LI G+C KG + A+++ M N P+ +
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRL 261
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
++ TL+N C++ +L EAY++ MK+ P+ V YNT+I G+ + ++ ++M
Sbjct: 262 SYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
N P+ ++Y LI GLC G + ++E+ P+ S + L+ G C
Sbjct: 322 LSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKV 381
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
E A + + G + + T+ M+I + C ++ + L D + +T D+ I+
Sbjct: 382 EEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDV 440
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 1/256 (0%)
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC-NKGLLGLALKMKSLMGNY 260
+I Y ++ + L T KM + +P N ++ ++G L A ++ +
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
V PN ++N L+ FC L AY++F +M +V P+ +Y LI G+ + G
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
M L ++M PD L+Y L+ LC+ + ++A L+ + P+ ++ +I G
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C + + A ++ M S G SPN ++ LI C FD + L +M+ + +P
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 441 SGILSALYNGLSRCGR 456
+ + L G G+
Sbjct: 365 FSVSNCLVKGFCSFGK 380
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 1/259 (0%)
Query: 217 ETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF 276
+ L K + G T F LI Y L L M + +P N +++
Sbjct: 105 DVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVL 164
Query: 277 CKE-GKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
G L +A+ +F ++ V PNT +YN L+ + + +LF +M V PD
Sbjct: 165 VSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPD 224
Query: 336 ILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYR 395
+ +Y LI G C+ G+ A L+ ++ VP+ +++ L+ C + A+++
Sbjct: 225 VDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLC 284
Query: 396 SMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
M G +P+ + +I FC+ + A +VL DML +P+S L GL G
Sbjct: 285 RMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQG 344
Query: 456 RKRLALELCSEMEAKRLLP 474
+ EM +K P
Sbjct: 345 MFDEGKKYLEEMISKGFSP 363
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 1/173 (0%)
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKD-GKTKKAANLVKEL 362
+ LI Y++ E + F +M P N ++ L G +KA L K
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
++PN +++ L+ C+ ++ A+Q++ M P+ ++ +LI FC+
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 423 DGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+GA+++L DML++ PD + L N L R + R A +L M+ K P+
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPD 294
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 213/461 (46%), Gaps = 41/461 (8%)
Query: 3 RNIRFSGTDLDFVNIAHSHLIHSQWENLHPLSTSLTPFRVKHILLKLKNDDV-LSLEFFN 61
+ I F + F H + + L + L V+ I+ +L ++ LS+ FF
Sbjct: 20 KEILFGMKKIGFREFLHGY-------HFRGLVSELRHVHVEEIMDELMSESSDLSVWFFK 72
Query: 62 WVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRL 121
+ + H+ + ++ H LA R+FK IL +++ ++R
Sbjct: 73 ELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEE-------------GTFRK 119
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
+S+ LV+D + + L + D+ + +MK+ + +S N S L R +
Sbjct: 120 WESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYN---SVLYHFRETDKMW 176
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE--KMKDMGLSPTVVSFNALIS 239
Y+E++ N +T + V+ C+ L A+ L + KD+G P+VVSFN+++S
Sbjct: 177 DVYKEIK----DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG--PSVVSFNSIMS 230
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
GYC G + +A + + P+V + N LING C G + EA + S+M V P
Sbjct: 231 GYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEP 290
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
++VTYN L G+ +G + +M + PD++TY L+ G C+ G L+
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 350
Query: 360 KEL-----DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
K++ + ++++P S +++G C + A ++ M + G SP+ + ++I
Sbjct: 351 KDMLSRGFELNSIIPC----SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIH 406
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
CK FD A+ + +M D+ + P+S AL GL + G
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKG 447
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 177/351 (50%), Gaps = 1/351 (0%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
S + F+++ Y L + A F + + G +P++ S N ++ L + AL
Sbjct: 221 SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELA 280
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
+M + + P+ T N++ + G + A E + M D GLSP V+++ L+ G C
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 245 GLLGLALKM-KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
G + + L + K ++ +++ + +++G CK G++ EA +F++MK ++P+ V
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
Y+ +I+G ++G + + L++EM ++ P+ T+ AL+LGLC+ G +A +L+ L
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
+ ++ +I G E A ++++ + G +P+ +TF LI +CK ++
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
A ++L + + P + L + + CG + EL EM+A+ + P
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 150/321 (46%), Gaps = 23/321 (7%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTL 199
++ +A F +MK G P L + + + L +L + ++AL Y EM I PN T
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
++ C+ G L A L+ + G + +V +N +I GY G + AL++ ++
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
++P+V TFN+LI G+CK + EA ++ +K+ +AP+ V+Y TL++ Y+ GN ++
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
L EM + P +TY+ + GLC+ K + ++++E
Sbjct: 557 IDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE------------------ 598
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
E+ Q R M S G P++ T+ +I C+ + GA L M R++
Sbjct: 599 -----RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDA 653
Query: 440 DSGILSALYNGLSRCGRKRLA 460
S + L + L G R A
Sbjct: 654 SSATYNILIDSLCVYGYIRKA 674
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 155/344 (45%), Gaps = 13/344 (3%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
+ + ++ + K + L + A M + G P + + L QL ++ L
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 183 FYREMRRDCISPN-VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
++M N + ++++ CK+G + AL +MK GLSP +V+++ +I G
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C G +AL + M + R+ PN T L+ G C++G L EA + + + +
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
V YN +I+GY++ G E + LF+ + + P + T+N+LI G CK +A ++
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC---K 418
+ L P+ +++ L+ N++ ++ R M + G P T+ ++ C K
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Query: 419 NED---------FDGAVQVLRDMLDRSMTPDSGILSALYNGLSR 453
+E+ F+ Q LRDM + PD + + L R
Sbjct: 589 HENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 14/254 (5%)
Query: 178 EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
E AL ++ + I+P+V T N +I YCK+ ++ A + L+ +K GL+P+VVS+ L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE------AYRVFS- 290
+ Y N G +++ M + P VT++ + G C+ K HE R+F
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK-HENCNHVLRERIFEK 603
Query: 291 ------EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
+M+ + P+ +TYNT+I ++ + E M + TYN LI
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
LC G +KA + + L + N+ + ++ LI CV+ + E A +++ + G++
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Query: 405 NESTFGMLISVFCK 418
+ + +I+ C+
Sbjct: 724 SIRDYSAVINRLCR 737
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 7/214 (3%)
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M + ++ + ++N+++ F + K+ + Y+ E+K N TY+T+++G +
Sbjct: 150 MKDQNLNVSTQSYNSVLYHFRETDKMWDVYK---EIK----DKNEHTYSTVVDGLCRQQK 202
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
E + + P ++++N+++ G CK G A + + K LVP+ + +
Sbjct: 203 LEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 262
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
LI G C+ + A ++ M G P+ T+ +L F GA +V+RDMLD+
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
++PD + L G + G + L L +M ++
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 288 VFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLC 347
+ +MK N+ +T +YN+++ + + + ++ + TY+ ++ GLC
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH-------TYSTVVDGLC 198
Query: 348 KDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNES 407
+ K + A ++ + ++ P+ +F+++++G C + A + ++ G P+
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258
Query: 408 TFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
+ +LI+ C A+++ DM + PDS + L G G A E+ +M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 468 EAKRLLPE 475
K L P+
Sbjct: 319 LDKGLSPD 326
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 155/307 (50%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
K+ DA F M+E G + + +S + + A + E+ +SP+ YT
Sbjct: 309 KMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYG 368
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
+I CK G++ A + +M+ G++ T V FN LI GYC KG++ A + +M
Sbjct: 369 ALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK 428
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
+V T NT+ + F + + EA + M V +TV+Y LI+ Y + GN E
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
RLF EM V+P+ +TYN +I CK GK K+A L ++ + + P++ T+++LI G
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
+C+ +N + A +++ M G N T+ ++IS K D A + +M + T D
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Query: 441 SGILSAL 447
+ + +AL
Sbjct: 609 NKVYTAL 615
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 178/401 (44%), Gaps = 6/401 (1%)
Query: 79 LLHTLANNRKFKTAHSILRRIINVN-----VASSSNTLFDALLCSYRLCDSSPLVFDAVF 133
L H L +NR+F S+L ++N V + + D + S + FD VF
Sbjct: 103 LSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDI-SEEKFEFFEKFFDLVF 161
Query: 134 KTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCIS 193
+ Y + + F M + G SC FL + + RR ++ L +R M +
Sbjct: 162 RVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVK 221
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
VY+L +V+ C+ G++ ++ + +++ G+ P ++N +I+ Y + +
Sbjct: 222 ITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGV 281
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
+M V N VT+ L+ K GK+ +A ++F EM+ + + Y +LI+ +
Sbjct: 282 LKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCR 341
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
GN + LF+E+ + P TY ALI G+CK G+ A L+ E+ +
Sbjct: 342 KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
F+ LI G C + + A IY M G+ + T + S F + + +D A Q L M+
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 434 DRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ + + + L + + G A L EM +K + P
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
+ +VF+ + Y + +A+ + M++ GF + +CN S +L+R + A +
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL 457
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
M + + + +I YCK G++ A +M G+ P +++N +I YC +
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ 517
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
G + A K+++ M + P+ T+ +LI+G C + EA R+FSEM + + N+VTY
Sbjct: 518 GKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTY 577
Query: 305 NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALI 343
+I+G S+ G + L++EM R D Y ALI
Sbjct: 578 TVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A Y M + +V+T N + + + A + L +M + G+ + VS+ LI
Sbjct: 418 ASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
YC +G + A ++ M + V PN +T+N +I +CK+GK+ EA ++ + M+ + P
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
++ TY +LI+G N + MRLF EMG + + +TY +I GL K GK+ +A L
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLY 597
Query: 360 KELDKDNLVPNASTFSALI 378
E+ + + ++ALI
Sbjct: 598 DEMKRKGYTIDNKVYTALI 616
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%)
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
++V Y +G L + M GLS S + + + L L++ M +
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
V V + ++ G C+ G++ ++ ++ E V + P TYNT+IN Y + +
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
+ + M ++ V + +TY L+ K+GK A L E+ + + + +++LI+
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
C + N +RAF ++ +T G SP+ T+G LI CK + A ++ +M + +
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397
Query: 440 DSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQEKIA 483
+ + L +G R G A + ME K + F IA
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/529 (24%), Positives = 217/529 (41%), Gaps = 96/529 (18%)
Query: 23 IHSQWENLHP-----LSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHS 77
+ S W H L SL P +V +L + ++D+ ++L+FF W H +
Sbjct: 153 LRSSWNPKHEGQMRNLLRSLKPSQVCAVL-RSQDDERVALKFFYWADRQWRYRHDPMVYY 211
Query: 78 ILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYA 137
+L L+ + + + +L +L R +P F V +Y+
Sbjct: 212 SMLEVLSKTKLCQGSRRVL------------------VLMKRRGIYRTPEAFSRVMVSYS 253
Query: 138 NLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVY 197
+LRDA M+ G P L CN + ++ R E AL F M+ I PNV
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 198 TLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC-NKGLLGLALKMKSL 256
T N +I YC + A+E LE M G P VS+ ++ C K ++ + MK +
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 257 MGNYRVSPNVVTFNTLIN---------------------GF--------------CKEGK 281
+ + P+ VT+NTLI+ GF CKEG+
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433
Query: 282 LHEAYRVFSEM-KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
+ EA + +EM + P+ VTY ++NG+ ++G + +L + M + KP+ ++Y
Sbjct: 434 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYT 493
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
AL+ G+C+ GK+ +A ++ ++ PN+ T+S ++ G A + R M
Sbjct: 494 ALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLK 553
Query: 401 GYSP-----------------------------------NESTFGMLISVFCKNEDFDGA 425
G+ P N F +I FC+N++ D A
Sbjct: 554 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 613
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ VL DM + D + L + L + GR A EL +M K + P
Sbjct: 614 LSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDP 662
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 134/296 (45%), Gaps = 8/296 (2%)
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM-RRDCISPNVYTLN 200
L+DA R+ + G+ +A + +L + R A EM + P+V T
Sbjct: 406 LKDAQEKGFRIDKLGY-------SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYT 458
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
V+ +C+ G++ +A + L+ M G P VS+ AL++G C G A +M ++ +
Sbjct: 459 AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH 518
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
SPN +T++ +++G +EGKL EA V EM + P V N L+ + G
Sbjct: 519 WWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA 578
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+ EE +++ + +I G C++ + A +++ ++ N + T++ L+
Sbjct: 579 RKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDT 638
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
+ A ++ + M G P T+ +I +C+ D V +L M+ R
Sbjct: 639 LGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ 694
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 133/336 (39%), Gaps = 4/336 (1%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C + + AV + L ++ A M +G P S A L+ + + ++ A
Sbjct: 450 CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAR 509
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
SPN T ++++ + G L A + + +M G P V N L+
Sbjct: 510 EMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSL 569
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C G A K N + NVV F T+I+GFC+ +L A V +M + N +
Sbjct: 570 CRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADV 629
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
TY TL++ + G L ++M + P +TY +I C+ GK +LV
Sbjct: 630 FTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD---DLVAI 686
Query: 362 LDKDNLVPNAST-FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
L+K T ++ +I CV E A + + + T L+ + K
Sbjct: 687 LEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKG 746
Query: 421 DFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
A +V M +R++ PD + L L G+
Sbjct: 747 VPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGK 782
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 101/279 (36%), Gaps = 34/279 (12%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ + + KL +A M GF P N L SL + R A F E
Sbjct: 525 ITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
+ NV VI +C++ +L AL L+ M + V ++ L+ KG
Sbjct: 585 CLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGR 644
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG-------------------------- 280
+ A ++ M + + P VT+ T+I+ +C+ G
Sbjct: 645 IAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVI 704
Query: 281 -------KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVK 333
KL EA + ++ + T L+ GY + G + ++ M +
Sbjct: 705 EKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLI 764
Query: 334 PDILTYNALILGLCKDGKTKKAANLVKEL-DKDNLVPNA 371
PD+ L L GK +A L+ L ++ ++ P +
Sbjct: 765 PDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQS 803
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 191/437 (43%), Gaps = 53/437 (12%)
Query: 67 NPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASS---SNTLFDALLCSYRLCD 123
N +LQ+++I L L + KF A ++L+++ + + S N L D L
Sbjct: 320 NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGL-------- 371
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
L L DA MK G P + L + + + A +
Sbjct: 372 -------------CKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
+EM R+ PN YT N+++ + K G + A E L KM + G V+ N ++ G C
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 244 KGLLGLALKMKSLM-----------GNYRVS------------PNVVTFNTLINGFCKEG 280
G L A+++ M GN + P+++T++TL+NG CK G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
+ EA +F+EM + P++V YN I+ + + G + R+ ++M + + TYN
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
+LILGL + + L+ E+ + + PN T++ I C E A + M
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
+PN +F LI FCK DFD A +V + + G+ S ++N L G+ A
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE-GLYSLMFNELLAAGQLLKA 717
Query: 461 LELCSEMEAKRLLPEGF 477
EL +EA +L GF
Sbjct: 718 TEL---LEA--VLDRGF 729
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 169/363 (46%), Gaps = 44/363 (12%)
Query: 159 PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET 218
P++ N L S ++ RR E Y++M I+P YT N++I A C S + A E
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF-- 276
++M + G P +F L+ GYC GL L++ + M ++ V PN V +NT+++ F
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 277 ---------------------------------CKEGKLHEAYRVFSEMKVANV----AP 299
CKEGK+ +A R+FS+M++ P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
N++TYN ++ G+ ++G E LFE + N + +YN + GL + GK +A ++
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
K++ + P+ +++ L+ G C A I M G P+ T+G L+ +C
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQ 479
D A +L++M+ + P++ + L + L + GR A EL +M K G+G
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK-----GYGL 464
Query: 480 EKI 482
+ +
Sbjct: 465 DTV 467
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 181/424 (42%), Gaps = 53/424 (12%)
Query: 91 TAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFL 150
T + ++R + + + ++ LFD + + C + F + + Y
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEM--PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
M+ +G LP N +SS + R + + +MR + + P++ T N I A CK G
Sbjct: 207 AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
Query: 211 ---DLPRALETLEKMKDMGLS-PTVVSFNALISGYCNKGLL------------------- 247
D R +E + +GL P +++N ++ G+C GLL
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326
Query: 248 --------GLALKMKSL--------MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
GL K + M + + P++ ++N L++G CK G L +A +
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
MK V P+ VTY L++GY +G + L +EM RN P+ T N L+ L K G+
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 352 TKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGM 411
+A L++++++ + T + ++ G C ++A +I + M G + G
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG----SAALGN 502
Query: 412 LISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR 471
L + G V +++ + PD S L NGL + GR A L +EM ++
Sbjct: 503 L------GNSYIGLVD--DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK 554
Query: 472 LLPE 475
L P+
Sbjct: 555 LQPD 558
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 167/383 (43%), Gaps = 35/383 (9%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+VF + Y L A+ + RM G P + + + L Q R A Y +
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSP----------------- 229
+ + + P++ T + +I +CK G+L E M MG P
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 230 ------------------TVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
VV FN+LI G+C ALK+ LMG Y + P+V TF T
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
++ EG+L EA +F M + P+ + Y TLI+ + + G++LF+ M RN+
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596
Query: 332 VKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAF 391
+ DI N +I L K + + A+ L + + P+ T++ +I G C + A
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656
Query: 392 QIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
+I+ + + PN T +LI V CKN D DGA+++ M ++ P++ L +
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 452 SRCGRKRLALELCSEMEAKRLLP 474
S+ + +L EM+ K + P
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISP 739
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 168/355 (47%), Gaps = 38/355 (10%)
Query: 154 EYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC-ISPNVYTLNMVICAYCKSGDL 212
E GF + SCN L L + + EVA + DC +PNV T +I +CK G++
Sbjct: 245 ERGFRVGIVSCNKVLKGL-SVDQIEVASRLL-SLVLDCGPAPNVVTFCTLINGFCKRGEM 302
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL---------------- 256
RA + + M+ G+ P +++++ LI GY G+LG+ K+ S
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362
Query: 257 -------------------MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
M +SPNVVT+ LI G C++G+++EA+ ++ ++ +
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
P+ VTY++LI+G+ + GN +G L+E+M + PD++ Y L+ GL K G A
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
++ ++ N F++LI G C N + A +++R M G P+ +TF ++ V
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
+ A+ + M + PD+ L + + + + L+L M+ ++
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 131/278 (47%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
F V + +L +A F RM + G P + + + + + + L + M+
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
R+ IS ++ N+VI K + A + + + + P +V++N +I GYC+ L
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 653
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
A ++ L+ PN VT LI+ CK + A R+FS M PN VTY L+
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 713
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
+ +S+ + E +LFEEM + P I++Y+ +I GLCK G+ +A N+ + L+
Sbjct: 714 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 773
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
P+ ++ LI G C A +Y M G P++
Sbjct: 774 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 178/403 (44%), Gaps = 3/403 (0%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP--LVFDAV 132
T ++ H L R F+ +++ ++ + LL C +P + F +
Sbjct: 234 TKALDFHRLVMERGFRVGIVSCNKVLK-GLSVDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 133 FKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCI 192
+ ++ A F M++ G P L + + + + + + + +
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 193 SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK 252
+V + I Y KSGDL A ++M G+SP VV++ LI G C G + A
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
M + + P++VT+++LI+GFCK G L + ++ +M P+ V Y L++G S
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
+ G MR +M ++ +++ +N+LI G C+ + +A + + + + P+ +
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
TF+ ++ + E A ++ M +G P+ + LI FCK+ +Q+ M
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 433 LDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
++ D + + + + L +C R A + + + ++ P+
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 144/323 (44%)
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
N+ + +L R + AL +R M I P+V T V+ G L AL +M
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
MGL P +++ LI +C + L++ LM ++S ++ N +I+ K ++ +
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
A + F+ + + P+ VTYNT+I GY + + R+FE + P+ +T LI
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
LCK+ A + + + PNA T+ L+ + E +F+++ M G SP
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739
Query: 405 NESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELC 464
+ ++ ++I CK D A + +D + PD + L G + GR A L
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799
Query: 465 SEMEAKRLLPEGFGQEKIAITSP 487
M + P+ Q ++ +P
Sbjct: 800 EHMLRNGVKPDDLLQRALSEYNP 822
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTL 199
+++ DA+ F + E P + + N + LRR + A + ++ PN TL
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
++I CK+ D+ A+ M + G P V++ L+ + + + K+ M
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
+SP++V+++ +I+G CK G++ EA +F + A + P+ V Y LI GY ++G
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 794
Query: 320 GMRLFEEMGRNQVKPDILTYNAL 342
L+E M RN VKPD L AL
Sbjct: 795 AALLYEHMLRNGVKPDDLLQRAL 817
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 111/253 (43%), Gaps = 19/253 (7%)
Query: 55 LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDA 114
+ L+ F+ + N S + ++++H L + + A +I + T ++
Sbjct: 584 IGLQLFDLMQR-NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT-YNT 641
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
++C Y +L +L +A F +K F P + + L +
Sbjct: 642 MICGY-----------------CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
+ A+ + M PN T ++ + KS D+ + + E+M++ G+SP++VS+
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
+ +I G C +G + A + + ++ P+VV + LI G+CK G+L EA ++ M
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 804
Query: 295 ANVAPNTVTYNTL 307
V P+ + L
Sbjct: 805 NGVKPDDLLQRAL 817
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 163/347 (46%), Gaps = 31/347 (8%)
Query: 149 FLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK 208
+ +M G P + + N + S ++ R A++ +R IS + T N VI C+
Sbjct: 117 YSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCE 173
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG----------------------L 246
G A + L +M MG+ P VS+N LI G+C G L
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTIL 233
Query: 247 LGLALKMKSLMGNYR------VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
L + ++ YR P+VVTF+++IN CK GK+ E + EM+ +V PN
Sbjct: 234 LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPN 293
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
VTY TL++ + + L+ +M + D++ Y L+ GL K G ++A K
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 361 ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
L +DN VPN T++AL+ G C + A I M PN T+ +I+ + K
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKG 413
Query: 421 DFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
+ AV +LR M D+++ P+ + +GL + G++ +A+EL EM
Sbjct: 414 MLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 155/337 (45%), Gaps = 36/337 (10%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD 211
M+E G + S N +S +L+ + A Y+ MR I P++ T N+++ + K GD
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGD 588
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF-- 269
L+ +KMK G+ P+++S N ++ C G + A+ + + M + PN+ T+
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 270 ---------------------------------NTLINGFCKEGKLHEAYRVFSEMKVAN 296
NTLI CK G +A V +M+
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
P+TVT+N+L++GY + + + M + P++ TYN +I GL G K+
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
+ E+ + P+ T++ALI+GQ N + + IY M + G P ST+ +LIS F
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSR 453
A ++L++M R ++P++ + +GL +
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 78/339 (23%)
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
KM G+SP V + N LI +C G L A+ SL+ N +S + VT+NT+I+G C+ G
Sbjct: 119 KMIACGVSPDVFALNVLIHSFCKVGRLSFAI---SLLRNRVISIDTVTYNTVISGLCEHG 175
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMG------------ 328
EAY+ SEM + P+TV+YNTLI+G+ ++GN L +E+
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLS 235
Query: 329 ------------RNQV----KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
R+ V PD++T++++I LCK GK + L++E+++ ++ PN
Sbjct: 236 SYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHV 295
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYS----------------------------- 403
T++ L+ N A +Y M G
Sbjct: 296 TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 355
Query: 404 ------PNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
PN T+ L+ CK D A ++ ML++S+ P+ S++ NG + G
Sbjct: 356 LEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGML 415
Query: 458 RLALELCSEMEAKRLLPEGF------------GQEKIAI 484
A+ L +ME + ++P GF G+E++AI
Sbjct: 416 EEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 120/243 (49%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTL 199
K+ +A H +M P L + FL + + +RA+ + + I +
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
N +I CK G +A + M+ G P V+FN+L+ GY + AL S+M
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
+SPNV T+NT+I G G + E + SEMK + P+ TYN LI+G ++IGN +
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKG 801
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
M ++ EM + + P TYN LI GK +A L+KE+ K + PN ST+ +I+
Sbjct: 802 SMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Query: 380 GQC 382
G C
Sbjct: 862 GLC 864
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 131/271 (48%), Gaps = 6/271 (2%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+MK G P+L SCN + L + + E A+ +M I PN+ T + + K
Sbjct: 598 KMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 657
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVS---PNVV 267
+T E + G+ + +N LI+ C LG+ K +MG+ P+ V
Sbjct: 658 RADAIFKTHETLLSYGIKLSRQVYNTLIATLCK---LGMTKKAAMVMGDMEARGFIPDTV 714
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
TFN+L++G+ + +A +S M A ++PN TYNT+I G S G + + EM
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM 774
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
++PD TYNALI G K G K + + E+ D LVP ST++ LI+
Sbjct: 775 KSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKM 834
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
+A ++ + M G SPN ST+ +IS CK
Sbjct: 835 LQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 172/377 (45%), Gaps = 21/377 (5%)
Query: 78 ILLHTLANNRKFKTAHSILR-RIINVNVASSSNTLFDALLCSYRLCDS-----SPLVFDA 131
+L+H+ + A S+LR R+I+++ + NT+ L C + L D S +V
Sbjct: 134 VLIHSFCKVGRLSFAISLLRNRVISIDTVTY-NTVISGL-CEHGLADEAYQFLSEMVKMG 191
Query: 132 VFKTYANLNKLRDA---THTFLRMKEYGFLPTLESCN-----AFLSSLLQLRRAEVALAF 183
+ + N L D F+R K + + N LSS L E A
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAK--ALVDEISELNLITHTILLSSYYNLHAIEEA--- 246
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
YR+M P+V T + +I CK G + L +M++M + P V++ L+
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
+ AL + S M + ++V + L++G K G L EA + F + N PN VT
Sbjct: 307 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVT 366
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
Y L++G + G+ + + +M V P+++TY+++I G K G ++A +L+++++
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
N+VPN T+ +I G E A ++ + M IG N L++ +
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 486
Query: 424 GAVQVLRDMLDRSMTPD 440
+++DM+ + +T D
Sbjct: 487 EVKGLVKDMVSKGVTLD 503
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 169/419 (40%), Gaps = 71/419 (16%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ + ++ Y L +A +M++ +P + + L + + E+A+ +E
Sbjct: 400 VTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKE 459
Query: 187 MRRDCISPNVYTLNMV-----------------------------------ICAYCKSGD 211
MR + N Y L+ + I + K GD
Sbjct: 460 MRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
AL E+M++ G+ VVS+N LISG G +G K M + P++ TFN
Sbjct: 520 EEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKG-MREKGIEPDIATFNI 578
Query: 272 LING-----------------------------------FCKEGKLHEAYRVFSEMKVAN 296
++N C+ GK+ EA + ++M +
Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 638
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
+ PN TY ++ S+ + + E + +K YN LI LCK G TKKAA
Sbjct: 639 IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 698
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
++ +++ +P+ TF++L+ G V ++ +A Y M G SPN +T+ +I
Sbjct: 699 MVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL 758
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ L +M R M PD +AL +G ++ G + ++ + EM A L+P+
Sbjct: 759 SDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPK 817
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 177/406 (43%), Gaps = 22/406 (5%)
Query: 69 SSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLV 128
S L TH+ILL + N + A+ D ++ + D +
Sbjct: 223 SELNLITHTILLSSYYNLHAIEEAYR------------------DMVMSGF---DPDVVT 261
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
F ++ K+ + M+E P + + SL + ALA Y +M
Sbjct: 262 FSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV 321
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
I ++ +++ K+GDL A +T + + + P VV++ AL+ G C G L
Sbjct: 322 VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLS 381
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
A + + M V PNVVT++++ING+ K+G L EA + +M+ NV PN TY T+I
Sbjct: 382 SAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVI 441
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
+G + G E + L +EM V+ + +AL+ L + G+ K+ LVK++ +
Sbjct: 442 DGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
+ +++LI + E A M G + ++ +LIS K GA
Sbjct: 502 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWA 560
Query: 429 LRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ M ++ + PD + + N + G L+L +M++ + P
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKP 606
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 163/417 (39%), Gaps = 73/417 (17%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
++ D +FK LR+A TF + E +P + + A + L + A +
Sbjct: 334 VLMDGLFKA----GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQ 389
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M + PNV T + +I Y K G L A+ L KM+D + P ++ +I G G
Sbjct: 390 MLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 449
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+A+++ M V N + L+N + G++ E + +M V + + Y +
Sbjct: 450 EEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTS 509
Query: 307 LINGYSQIGNCE-------------------------TGMRLFEEMGRNQ---------V 332
LI+ + + G+ E +GM F ++G + +
Sbjct: 510 LIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGI 569
Query: 333 KPDILTYNAL----------------------------------ILG-LCKDGKTKKAAN 357
+PDI T+N + ++G LC++GK ++A +
Sbjct: 570 EPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
++ ++ + PN +T+ + ++ F+ + ++ S G + + LI+ C
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 689
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
K A V+ DM R PD+ ++L +G R AL S M + P
Sbjct: 690 KLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP 746
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 18/271 (6%)
Query: 57 LEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNV------------ 104
L+ ++ + +C +L + +I++ L N K + A IL +++ + +
Sbjct: 593 LKLWDKMKSCGIKP-SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLD 651
Query: 105 ASSSNTLFDALLCSYRLCDS-----SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLP 159
SS + DA+ ++ S S V++ + T L + A M+ GF+P
Sbjct: 652 TSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 711
Query: 160 TLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETL 219
+ N+ + AL+ Y M ISPNV T N +I +G + + L
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 220 EKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKE 279
+MK G+ P ++NALISG G + ++ + M + P T+N LI+ F
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 280 GKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
GK+ +A + EM V+PNT TY T+I+G
Sbjct: 832 GKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 73 LQTHSILLHTLANNRK----FKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLV 128
L T+ I L T + +++ FKT ++L I ++ NTL A LC + + +V
Sbjct: 643 LTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLS-RQVYNTLI-ATLCKLGMTKKAAMV 700
Query: 129 ---------------FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ 173
F+++ Y + +R A T+ M E G P + + N + L
Sbjct: 701 MGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSD 760
Query: 174 LRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
+ + EM+ + P+ +T N +I K G++ ++ +M GL P +
Sbjct: 761 AGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTST 820
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
+N LIS + N G + A ++ MG VSPN T+ T+I+G CK
Sbjct: 821 YNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 4/185 (2%)
Query: 266 VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL-F 324
V F+TL + +L+ A R S M V P++ +N+LI+ ++ G + L +
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
+M V PD+ N LI CK G+ A +L++ + + T++ +I+G C
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGLCEH 174
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGIL 444
++ A+Q M +G P+ ++ LI FCK +F A ++ ++ + ++ + +L
Sbjct: 175 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILL 234
Query: 445 SALYN 449
S+ YN
Sbjct: 235 SSYYN 239
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 191/421 (45%), Gaps = 21/421 (4%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNT---LFDALLCSYRLCDSSPLVFDA 131
T +I + L K A+ IL+R+ + T L DAL C+ R D + VF+
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL-CTARKLDCAKEVFEK 318
Query: 132 VFK--------TYANL------NKLRDATHTFL-RMKEYGFLPTLESCNAFLSSLLQLRR 176
+ TY L N+ D+ F M++ G +P + + + +L +
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378
Query: 177 AEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNA 236
A MR I PN++T N +IC + L ALE M+ +G+ PT ++
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438
Query: 237 LISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
I Y G AL+ M ++PN+V N + K G+ EA ++F +K
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
+ P++VTYN ++ YS++G + ++L EM N +PD++ N+LI L K + +A
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
+ + + L P T++ L+ G + A +++ M G PN TF L
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEG 476
CKN++ A+++L M+D PD + + GL + G+ + A +C + K+L+
Sbjct: 619 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA--MCFFHQMKKLVYPD 676
Query: 477 F 477
F
Sbjct: 677 F 677
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 171/344 (49%)
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+FK+ + L+ A + +M+E+GF+ S N + LL+ R A+ YR M +
Sbjct: 159 IFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG 218
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
P++ T + ++ K D+ + L++M+ +GL P V +F I G + A
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
++ M + P+VVT+ LI+ C KL A VF +MK P+ VTY TL++ +
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
S + ++ + + EM ++ PD++T+ L+ LCK G +A + + + ++PN
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
T++ LI G + + A +++ +M S+G P T+ + I + K+ D A++
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
M + + P+ +A L++ GR R A ++ ++ L+P+
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 157/355 (44%), Gaps = 38/355 (10%)
Query: 95 ILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKE 154
I+R N S + TLF+ + P ++ + + + A FL++K
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLP-TYNLLIGGLLEADMIEIAQDVFLQVKS 813
Query: 155 YGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPR 214
G +P + + N L + + + + Y+EM N T N+VI K+G++
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
Query: 215 ALETL-EKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLI 273
AL+ + M D SPT ++ LI G G L A ++ M +Y PN +N LI
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933
Query: 274 NGF-----------------------------------CKEGKLHEAYRVFSEMKVANVA 298
NGF C G++ E F E+K + +
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ-VKPDILTYNALILGLCKDGKTKKAAN 357
P+ V YN +ING + E + LF EM ++ + PD+ TYN+LIL L G ++A
Sbjct: 994 PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK 1053
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
+ E+ + L PN TF+ALI G + E A+ +Y++M + G+SPN T+ L
Sbjct: 1054 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 163/366 (44%), Gaps = 3/366 (0%)
Query: 112 FDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRM-KEYGFLPTLESCNAFLSS 170
F L + +C + + + N + A F + K+ G P L + N +
Sbjct: 735 FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG 794
Query: 171 LLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT 230
LL+ E+A + +++ P+V T N ++ AY KSG + E ++M
Sbjct: 795 LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 231 VVSFNALISGYCNKGLLGLALKMK-SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF 289
++ N +ISG G + AL + LM + SP T+ LI+G K G+L+EA ++F
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 290 SEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKD 349
M PN YN LING+ + G + LF+ M + V+PD+ TY+ L+ LC
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 350 GKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM-TSIGYSPNEST 408
G+ + + KEL + L P+ ++ +I G + E A ++ M TS G +P+ T
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 409 FGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
+ LI + A ++ ++ + P+ +AL G S G+ A + M
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Query: 469 AKRLLP 474
P
Sbjct: 1095 TGGFSP 1100
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 183/443 (41%), Gaps = 58/443 (13%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
T+ T++ LL L N K + A + ++ + C + + F+
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQ------------------KGCPPNTITFNT 613
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+F +++ A +M + G +P + + N + L++ + + A+ F+ +M++
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-L 672
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEK---------------------MKDMGLSPT 230
+ P+ TL ++ K+ + A + + + + G+
Sbjct: 673 VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA 732
Query: 231 VVSFNALIS-GYCNKG------LLGLALKMKSLMG----------NYRVSPNVVTFNTLI 273
V L++ G C G ++ + K ++ G + V P + T+N LI
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792
Query: 274 NGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVK 333
G + + A VF ++K P+ TYN L++ Y + G + L++EM ++ +
Sbjct: 793 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 334 PDILTYNALILGLCKDGKTKKAANLVKELDKD-NLVPNASTFSALITGQCVRNNSERAFQ 392
+ +T+N +I GL K G A +L +L D + P A T+ LI G A Q
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 912
Query: 393 IYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLS 452
++ M G PN + + +LI+ F K + D A + + M+ + PD S L + L
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 453 RCGRKRLALELCSEMEAKRLLPE 475
GR L E++ L P+
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPD 995
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 10/323 (3%)
Query: 160 TLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETL 219
T E+CN L +L + E + M++ I + T + + G L +A L
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 220 EKMKDMGLSPTVVSFNALI-----SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLIN 274
KM++ G S+N LI S +C + + + + ++ +R P++ T+++L+
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM---EVYRRMILEGFR--PSLQTYSSLMV 231
Query: 275 GFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKP 334
G K + + EM+ + PN T+ I + G + + M P
Sbjct: 232 GLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP 291
Query: 335 DILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIY 394
D++TY LI LC K A + +++ P+ T+ L+ + + Q +
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 395 RSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRC 454
M G+ P+ TF +L+ CK +F A L M D+ + P+ + L GL R
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411
Query: 455 GRKRLALELCSEMEAKRLLPEGF 477
R ALEL ME+ + P +
Sbjct: 412 HRLDDALELFGNMESLGVKPTAY 434
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 3/203 (1%)
Query: 108 SNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAF 167
+ LF+ +L Y C + +++ + + + A F RM + G P L++ +
Sbjct: 910 AKQLFEGML-DYG-CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 967
Query: 168 LSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMK-DMG 226
+ L + R + L +++E++ ++P+V N++I KS L AL +MK G
Sbjct: 968 VDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG 1027
Query: 227 LSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
++P + ++N+LI G++ A K+ + + + PNV TFN LI G+ GK AY
Sbjct: 1028 ITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1087
Query: 287 RVFSEMKVANVAPNTVTYNTLIN 309
V+ M +PNT TY L N
Sbjct: 1088 AVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%)
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
KS+ GN + T N ++ +GKL E VF M+ + +T TY T+ S
Sbjct: 106 KSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSV 165
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
G + +M + +YN LI L K +A + + + + P+ T
Sbjct: 166 KGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQT 225
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
+S+L+ G R + + + + M ++G PN TF + I V + + A ++L+ M
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 434 DRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
D PD + L + L + A E+ +M+ R P+
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 169/333 (50%), Gaps = 2/333 (0%)
Query: 144 DATHTFLRMKEY-GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMV 202
DA +FL+M E G P + N + + +++ ++A + + EM + PN +T +++
Sbjct: 466 DAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSIL 525
Query: 203 ICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-KSLMGNYR 261
I + K+ D A + + +M V +N +I+G C G A +M ++L+ R
Sbjct: 526 IDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR 585
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGM 321
S + ++N++I+GF K G A + EM +PN VT+ +LING+ + + +
Sbjct: 586 YSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLAL 645
Query: 322 RLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQ 381
+ EM ++K D+ Y ALI G CK K A L EL + L+PN S +++LI+G
Sbjct: 646 EMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF 705
Query: 382 CVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
+ A +Y+ M + G S + T+ +I K+ + + A + ++LD + PD
Sbjct: 706 RNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Query: 442 GILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ L NGLS+ G+ A ++ EM+ K + P
Sbjct: 766 ILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTP 798
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 142/271 (52%), Gaps = 5/271 (1%)
Query: 185 REMRRDCISPNVYTL-----NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
+EM ++ I Y++ N +I + K GD A+ET +M + G SP VV+F +LI+
Sbjct: 574 KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN 633
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
G+C + LAL+M M + + ++ + LI+GFCK+ + AY +FSE+ + P
Sbjct: 634 GFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMP 693
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
N YN+LI+G+ +G + + L+++M + + D+ TY +I GL KDG A++L
Sbjct: 694 NVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLY 753
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
EL +VP+ L+ G + +A ++ M +PN + +I+ +
Sbjct: 754 SELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHRE 813
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
+ + A ++ +ML++ + D + + L +G
Sbjct: 814 GNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 172/362 (47%), Gaps = 9/362 (2%)
Query: 118 SYRLCDSSPLVFDAV---FKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
S R+ SS LV + K + L +F +GF+ CN +
Sbjct: 408 SVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFM-----CNKIFLLFCKQ 462
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
+ + A +F + M + I PNV N ++ A+C+ ++ A +M + GL P ++
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM-K 293
+ LI G+ A + + M N V +NT+ING CK G+ +A + + K
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
+ + +YN++I+G+ ++G+ ++ + + EM N P+++T+ +LI G CK +
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 354 KAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
A + E+ L + + ALI G C +N+ + A+ ++ + +G PN S + LI
Sbjct: 643 LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
S F D A+ + + M++ ++ D + + +GL + G LA +L SE+ ++
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762
Query: 474 PE 475
P+
Sbjct: 763 PD 764
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 167/340 (49%), Gaps = 17/340 (5%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFK 134
T+SIL+ N+ + A ++ ++ N + ++ +++ ++ LC
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQM-NASNFEANEVIYNTIING--LC------------ 565
Query: 135 TYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISP 194
+K ++ ++ K Y T S N+ + +++ + A+ YREM + SP
Sbjct: 566 KVGQTSKAKEMLQNLIKEKRYSMSCT--SYNSIIDGFVKVGDTDSAVETYREMSENGKSP 623
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
NV T +I +CKS + ALE +MK M L + ++ ALI G+C K + A +
Sbjct: 624 NVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLF 683
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
S + + PNV +N+LI+GF GK+ A ++ +M ++ + TY T+I+G +
Sbjct: 684 SELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
GN L+ E+ + PD + + L+ GL K G+ KA+ +++E+ K ++ PN +
Sbjct: 744 GNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLY 803
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
S +I G N AF+++ M G +++ F +L+S
Sbjct: 804 STVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 143/286 (50%), Gaps = 2/286 (0%)
Query: 179 VALAFYREMRRDCISP-NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
+AL REMR P + T VI A+ K G++ A+ +++M G+ +V++ +L
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
++GYC LG AL + + M ++P+ V F+ ++ FCK ++ +A + MK +
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
AP++V +T+I G + + E + +F + + + + N + L CK GK A +
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATS 470
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
+K +++ + PN ++ ++ C N + A I+ M G PN T+ +LI F
Sbjct: 471 FLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFF 530
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
KN+D A V+ M + + I + + NGL + G+ A E+
Sbjct: 531 KNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEM 576
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 192/433 (44%), Gaps = 52/433 (12%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFK 134
T +L+ RK + A I RR+++ A LF L C + LV
Sbjct: 241 TTQLLMRASLRERKPEEAVKIFRRVMSRG-AEPDGLLFS--LAVQAACKTPDLVM----- 292
Query: 135 TYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISP 194
L+ LR+ +R K G + E+ + + + ++ E A+ EM I
Sbjct: 293 ---ALDLLRE-----MRGK-LGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
+V ++ YCK +L +AL+ +M++ GL+P V F+ ++ +C + A++
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 255 SLMGNYRVSPNVVTFNTLING----------------------------------FCKEG 280
M + R++P+ V +T+I G FCK+G
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQG 463
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
K+ A M+ + PN V YN ++ + ++ N + +F EM ++P+ TY+
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS 523
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
LI G K+ + A +++ +++ N N ++ +I G C + +A ++ +++
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 401 G-YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL 459
YS + +++ +I F K D D AV+ R+M + +P+ ++L NG + R L
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 460 ALELCSEMEAKRL 472
ALE+ EM++ L
Sbjct: 644 ALEMTHEMKSMEL 656
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 150/330 (45%), Gaps = 1/330 (0%)
Query: 145 ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVIC 204
A F M E G P + + + + + + A +M N N +I
Sbjct: 503 ARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIIN 562
Query: 205 AYCKSGDLPRALETLEKM-KDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVS 263
CK G +A E L+ + K+ S + S+N++I G+ G A++ M S
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS 622
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
PNVVTF +LINGFCK ++ A + EMK + + Y LI+G+ + + +T L
Sbjct: 623 PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
F E+ + P++ YN+LI G GK A +L K++ D + + T++ +I G
Sbjct: 683 FSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLK 742
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
N A +Y + +G P+E +L++ K F A ++L +M + +TP+ +
Sbjct: 743 DGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLL 802
Query: 444 LSALYNGLSRCGRKRLALELCSEMEAKRLL 473
S + G R G A L EM K ++
Sbjct: 803 YSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 148/305 (48%), Gaps = 11/305 (3%)
Query: 85 NNRKFKTAHSILRRIIN----VNVASSSNTLFDALLCSYRL---CDSSPLVFDAVFKTYA 137
N F+ I IIN V S + + L+ R C S ++++ +
Sbjct: 546 NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTS----YNSIIDGFV 601
Query: 138 NLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVY 197
+ A T+ M E G P + + + ++ + R ++AL EM+ + ++
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 198 TLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM 257
+I +CK D+ A ++ ++GL P V +N+LISG+ N G + A+ + M
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 258 GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNC 317
N +S ++ T+ T+I+G K+G ++ A ++SE+ + P+ + + L+NG S+ G
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQF 781
Query: 318 ETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSAL 377
++ EEM + V P++L Y+ +I G ++G +A L E+ + +V + + F+ L
Sbjct: 782 LKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL 841
Query: 378 ITGQC 382
++G+
Sbjct: 842 VSGRV 846
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 184/435 (42%), Gaps = 34/435 (7%)
Query: 41 RVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRII 100
RV +LL +ND V +L++ NWV + +L+H L + H+ R
Sbjct: 81 RVIEVLLGRRNDPVSALQYCNWVKPLHRLCEGGDVFWVLIHIL-----LSSIHTHDR--- 132
Query: 101 NVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPT 160
+SN L ++P + V +N L D++ K +GF T
Sbjct: 133 ------ASNLLV-------MFVSNNPTLIPNVM-----VNNLVDSS------KRFGFELT 168
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ N L++ ++ +R + A+ + M + P V +N V+ + +S + A E
Sbjct: 169 PRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYN 228
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
KM +G++ V+ L+ + A+K+ + + P+ + F+ + CK
Sbjct: 229 KMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTP 288
Query: 281 KLHEAYRVFSEMKVA-NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTY 339
L A + EM+ V + TY ++I + + GN E +R+ +EM + ++
Sbjct: 289 DLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAA 348
Query: 340 NALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTS 399
+L+ G CK + KA +L ++++ L P+ FS ++ C E+A + Y M S
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS 408
Query: 400 IGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL 459
+ +P+ +I K E + A+++ D + S + + ++ + G+
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE-SWIAHGFMCNKIFLLFCKQGKVDA 467
Query: 460 ALELCSEMEAKRLLP 474
A ME K + P
Sbjct: 468 ATSFLKMMEQKGIEP 482
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 177/383 (46%), Gaps = 33/383 (8%)
Query: 83 LANNRKFKTAHSILRRIINVNVASSSNTLFDAL--LCSYRLCDSSPLVFDAVFK------ 134
L + K++ A S++R +I ++T L LC+ + + L+F+ + +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 135 ---------TYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYR 185
++ + A F M+E G P + + A + + L+ ++ A +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM----------------KDMGLSP 229
M + PN+ T + +I +CK+G + +A + E+M D P
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 230 TVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF 289
VV++ AL+ G+C + A K+ M PN + ++ LI+G CK GKL EA V
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 290 SEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKD 349
+EM TY++LI+ Y ++ + ++ +M N P+++ Y +I GLCK
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 350 GKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
GKT +A L++ +++ PN T++A+I G + E ++ M S G +PN T+
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 410 GMLISVFCKNEDFDGAVQVLRDM 432
+LI CKN D A +L +M
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEM 840
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 162/327 (49%), Gaps = 6/327 (1%)
Query: 105 ASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESC 164
+ L DA+ S C+ + +V+DA+ + KL +A M E+GF TL +
Sbjct: 655 VEEARKLLDAM--SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
++ + +++R ++A +M + +PNV +I CK G A + ++ M++
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
G P VV++ A+I G+ G + L++ MG+ V+PN VT+ LI+ CK G L
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 832
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
A+ + EMK + +T Y +I G+++ + L +E+G++ P + Y LI
Sbjct: 833 AHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLID 890
Query: 345 GLCKDGKTKKAANLVKELD--KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
L K + + A L++E+ LV +ST+++LI C+ N E AFQ++ MT G
Sbjct: 891 NLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGV 950
Query: 403 SPNESTFGMLISVFCKNEDFDGAVQVL 429
P +F LI +N A+ +L
Sbjct: 951 IPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 178/405 (43%), Gaps = 26/405 (6%)
Query: 91 TAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFL 150
T +++ + S +N LF+ +L C + + + A+ + ++ A F
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEG--CLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 151 RM-------------KEY---GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISP 194
RM K+Y P + + A L + R E A M + P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
N + +I CK G L A E +M + G T+ ++++LI Y LA K+
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
S M +PNVV + +I+G CK GK EAY++ M+ PN VTY +I+G+ I
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G ET + L E MG V P+ +TY LI CK+G A NL++E+ + + + + +
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 852
Query: 375 SALITGQCVRNNSE--RAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
+I G N E + + + +P S + +LI K + + A+++L ++
Sbjct: 853 RKVIEG----FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Query: 433 --LDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
++ S ++L L + A +L SEM K ++PE
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 170/423 (40%), Gaps = 66/423 (15%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL------LQLR 175
C SP +F+++ Y A +M + G +P N + S+ L
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
++A Y EM + N ++ C +G +A + +M G P +++
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
+++ CN + LA + M + +V T+ +++ FCK G + +A + F+EM+
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
PN VTY LI+ Y + LFE M P+I+TY+ALI G CK G+ +KA
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 356 ANL----------------VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTS 399
+ K+ D ++ PN T+ AL+ G C + E A ++ +M+
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 400 IGYSPNESTFGMLISVFCKNEDFDGAVQ-------------------------------- 427
G PN+ + LI CK D A +
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 428 ---VLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP---------E 475
VL ML+ S P+ I + + +GL + G+ A +L ME K P +
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 476 GFG 478
GFG
Sbjct: 788 GFG 790
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 133/325 (40%), Gaps = 6/325 (1%)
Query: 157 FLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRAL 216
F+P +S L + E A+ F MR PNV T + ++C L R
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 217 ETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF 276
L M G P+ FN+L+ YC G A K+ M P V +N LI
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 277 CKEGK------LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
C + L A + +SEM A V N + ++ G E + EM
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
PD TY+ ++ LC K + A L +E+ + LV + T++ ++ C E+A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
+ + M +G +PN T+ LI + K + A ++ ML P+ SAL +G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 451 LSRCGRKRLALELCSEMEAKRLLPE 475
+ G+ A ++ M + +P+
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPD 622
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 145/366 (39%), Gaps = 44/366 (12%)
Query: 153 KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDL 212
++ G+ T NA + +++ +V F +++R D LN+++ +C++G
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSF 216
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTL 272
ALE L ++KD P+ ++N LI + L A + M + + T
Sbjct: 217 SIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCF 276
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQV 332
CK GK EA + ++ N P+TV Y LI+G + E M M
Sbjct: 277 AYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSC 333
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ 392
P+++TY+ L+ G + + ++ + + P+ F++L+ C + A++
Sbjct: 334 LPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 393
Query: 393 IYRSMTSIGYSPNESTFGMLISVFCKNED------------------------------- 421
+ + M G+ P + +LI C ++D
Sbjct: 394 LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS 453
Query: 422 ----------FDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR 471
++ A V+R+M+ + PD+ S + N L + LA L EM+
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 472 LLPEGF 477
L+ + +
Sbjct: 514 LVADVY 519
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 207/446 (46%), Gaps = 10/446 (2%)
Query: 17 IAHSHLIHSQWENLHPL--STSLTPFRVKHILLKLKNDDVL--SLEFFNWVHNCNPSSHT 72
I+ S + WE L S L+ ++ ILL+ KN + +L FF+W + H
Sbjct: 53 ISKSLQSNDTWETLSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHG 112
Query: 73 LQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAV 132
++++++ +H L R A +++ + +N S+ L D+LL +Y + S+PLVFD +
Sbjct: 113 IKSYALTIHILVKARLLIDARALIESSL-LNSPPDSD-LVDSLLDTYEISSSTPLVFDLL 170
Query: 133 FKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCI 192
+ YA + L F R+ + GF ++ + N + + + ++ Y I
Sbjct: 171 VQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRI 230
Query: 193 SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL--GLA 250
PN T+ ++I CK G L ++ L+++ P+V+ +L+ + + ++
Sbjct: 231 YPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMS 290
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
L + LM N V + + ++ ++ KEG L A +VF EM + N+ Y +
Sbjct: 291 LLKRLLMKNMVV--DTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRV 348
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
+ G+ + RL EM + V P T+N LI G + G +K + + L+P+
Sbjct: 349 CCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPS 408
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
S F+ ++ N RA +I G+ P+E T+ LI F + D D A+++
Sbjct: 409 CSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFY 468
Query: 431 DMLDRSMTPDSGILSALYNGLSRCGR 456
+M R M+P + +L GL CG+
Sbjct: 469 EMEYRKMSPGFEVFRSLIVGLCTCGK 494
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 4/223 (1%)
Query: 180 ALAFYREMRRDCISPN--VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
A + EM + S N VYT+ + +C C+ GD+ A L +M++ G+SP +FN L
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVC--CEKGDVKEAERLLSEMEESGVSPYDETFNCL 380
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
I G+ G L+ +M + P+ FN ++ K ++ A + ++
Sbjct: 381 IGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGF 440
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
P+ TY+ LI G+ + + + ++LF EM ++ P + +LI+GLC GK +
Sbjct: 441 VPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEK 500
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
+K + K + PNA + ALI + A ++Y M S+
Sbjct: 501 YLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMISV 543
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 2/221 (0%)
Query: 107 SSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNA 166
S+ +FD +L R ++ V+ + +++A M+E G P E+ N
Sbjct: 322 SARKVFDEML--QRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNC 379
Query: 167 FLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMG 226
+ + E L + M + P+ N ++ + K ++ RA E L K D G
Sbjct: 380 LIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKG 439
Query: 227 LSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
P +++ LI G+ + ALK+ M ++SP F +LI G C GK+
Sbjct: 440 FVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGE 499
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
+ MK + PN Y+ LI + +IG+ R++ EM
Sbjct: 500 KYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 175/381 (45%), Gaps = 18/381 (4%)
Query: 71 HTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFD 130
H ++S L++ LA +R F ILR L YR +F
Sbjct: 79 HDYPSYSSLIYKLAKSRNFDAVDQILR------------------LVRYRNVRCRESLFM 120
Query: 131 AVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD 190
+ + Y + A F ++ + + T++S N ++ L+ E A +F+ +
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
+ PN + N++I + D A + ++M +M + P+VV++N+LI C +G A
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
+ M R+ PN VTF L+ G C +G+ +EA ++ +M+ P V Y L++
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
+ G + L EM + ++KPD++ YN L+ LC + + +A ++ E+ PN
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
A+T+ +I G C + + + +M + + P +TF +++ K + D A VL
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Query: 431 DMLDRSMTPDSGILSALYNGL 451
M ++++ SG L + L
Sbjct: 421 VMGKKNLSFGSGAWQNLLSDL 441
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 7/316 (2%)
Query: 144 DATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRA----EVALAFYREMRRDCISPNVYTL 199
DA LR+ Y + ES F+ + +A + F++ DC+ + +L
Sbjct: 98 DAVDQILRLVRYRNVRCRES--LFMGLIQHYGKAGSVDKAIDVFHKITSFDCVR-TIQSL 154
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
N +I +G+L +A + KDM L P VSFN LI G+ +K A K+ M
Sbjct: 155 NTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLE 214
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
V P+VVT+N+LI C+ + +A + +M + PN VT+ L+ G G
Sbjct: 215 MEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNE 274
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
+L +M KP ++ Y L+ L K G+ +A L+ E+ K + P+ ++ L+
Sbjct: 275 AKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
C A+++ M G PN +T+ M+I FC+ EDFD + VL ML P
Sbjct: 335 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 394
Query: 440 DSGILSALYNGLSRCG 455
+ GL + G
Sbjct: 395 TPATFVCMVAGLIKGG 410
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 154/331 (46%), Gaps = 8/331 (2%)
Query: 144 DATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVI 203
+ TH F R K + +P FL+ L ++ E AL+ + + + + + + +I
Sbjct: 37 EPTHKFTR-KPWEEVP-------FLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLI 88
Query: 204 CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVS 263
KS + + L ++ + F LI Y G + A+ + + ++
Sbjct: 89 YKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCV 148
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
+ + NTLIN G+L +A F K + PN+V++N LI G+ + E ++
Sbjct: 149 RTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKV 208
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
F+EM +V+P ++TYN+LI LC++ KA +L++++ K + PNA TF L+ G C
Sbjct: 209 FDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCC 268
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
+ A ++ M G P +G+L+S K D A +L +M R + PD I
Sbjct: 269 KGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVI 328
Query: 444 LSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ L N L R A + +EM+ K P
Sbjct: 329 YNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%)
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
D AL + ++MG S+++LI ++ L+ V F
Sbjct: 61 DPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFM 120
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
LI + K G + +A VF ++ + + NTLIN G E F+
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
+++P+ +++N LI G + A + E+ + + P+ T+++LI C ++ +A
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
+ M PN TFG+L+ C +++ A +++ DM R P L +
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 451 LSRCGRKRLALELCSEMEAKRLLPE 475
L + GR A L EM+ +R+ P+
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPD 325
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 118/315 (37%), Gaps = 54/315 (17%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
T+Q+ + L++ L +N + + A S ++ + +S + F+
Sbjct: 150 TIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNS------------------VSFNI 191
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+ K + + A F M E P++ + N+ + L + A + +M +
Sbjct: 192 LIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKR 251
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
I PN T +++ C G+ A + + M+ G P +V++ L+S +G + A
Sbjct: 252 IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAK 311
Query: 252 KMKSLMGNYRVSPNVVTFNTL-----------------------------------INGF 276
+ M R+ P+VV +N L I+GF
Sbjct: 312 LLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Query: 277 CKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDI 336
C+ V + M + P T+ ++ G + GN + + E MG+ +
Sbjct: 372 CRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGS 431
Query: 337 LTYNALILGLC-KDG 350
+ L+ LC KDG
Sbjct: 432 GAWQNLLSDLCIKDG 446
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 206/438 (47%), Gaps = 26/438 (5%)
Query: 36 SLTPFRVKHIL--LKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAH 93
SL+P KH+L LK + + + F+ + + H HS +++ H
Sbjct: 7 SLSP---KHVLKLLKSEKNPRAAFALFD-----SATRHPGYAHSAVVY-----------H 47
Query: 94 SILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMK 153
ILRR+ + + + + + + CD V +V KTY + A F RM+
Sbjct: 48 HILRRLSETRMVNHVSRIVELIRSQECKCDED--VALSVIKTYGKNSMPDQALDVFKRMR 105
Query: 154 E-YGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDL 212
E +G P + S N L++ ++ ++ + + ++PN+ T N++I CK +
Sbjct: 106 EIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEF 165
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTL 272
+A L+ M G P V S++ +I+ G L AL++ M V+P+V +N L
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 273 INGFCKEGKLHEAYRVFSE-MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
I+GF KE A ++ ++ ++V PN T+N +I+G S+ G + ++++E M +N+
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 332 VKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAF 391
+ D+ TY++LI GLC G KA ++ ELD+ + T++ ++ G C + +
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345
Query: 392 QIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
+++R M S N ++ +LI +N D A + R M + D +GL
Sbjct: 346 ELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404
Query: 452 SRCGRKRLALELCSEMEA 469
G AL + E+E+
Sbjct: 405 CVNGYVNKALGVMQEVES 422
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 157/340 (46%), Gaps = 19/340 (5%)
Query: 56 SLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNT--LFD 113
SLE + + + N S + +++IL+ L N K A I R + A+ T +F
Sbjct: 344 SLELWRIMEHKN--SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFI 401
Query: 114 ALLCSYRLCDSSPLVFDAVFKTYANLN---------------KLRDATHTFLRMKEYGFL 158
LC + + V V + +L+ +L +A++ M ++G
Sbjct: 402 HGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVE 461
Query: 159 PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET 218
CNA + L++ R A F REM ++ P V + N++IC CK+G A
Sbjct: 462 LNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAF 521
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
+++M + G P + +++ L+ G C + LAL++ + +V+ N LI+G C
Sbjct: 522 VKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCS 581
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
GKL +A V + M+ N N VTYNTL+ G+ ++G+ ++ M + ++PDI++
Sbjct: 582 VGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIIS 641
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALI 378
YN ++ GLC A + + P T++ L+
Sbjct: 642 YNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 8/274 (2%)
Query: 202 VICAYCKSGDLPRALETLEKMKDM-GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
VI Y K+ +AL+ ++M+++ G P + S+N L++ + +K++SL +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQW---VKVESLFAYF 140
Query: 261 R---VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNC 317
V+PN+ T+N LI CK+ + +A M P+ +Y+T+IN ++ G
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200
Query: 318 ETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV-PNASTFSA 376
+ + LF+EM V PD+ YN LI G K+ K A L L +D+ V PN T +
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
+I+G + +I+ M + T+ LI C + D A V ++ +R
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
+ D + + G RCG+ + +LEL ME K
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 1/311 (0%)
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
N L + + + +L +R M S N+ + N++I ++G + A M
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
G + ++ I G C G + AL + + + +V + ++I+ CK+ +L E
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
A + EM V N+ N LI G + EMG+N +P +++YN LI
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
GLCK GK +A+ VKE+ ++ P+ T+S L+ G C + A +++ G
Sbjct: 508 GLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLET 567
Query: 405 NESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELC 464
+ +LI C D A+ V+ +M R+ T + + L G + G A +
Sbjct: 568 DVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Query: 465 SEMEAKRLLPE 475
M L P+
Sbjct: 628 GYMYKMGLQPD 638
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 163/408 (39%), Gaps = 19/408 (4%)
Query: 67 NPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP 126
N L T+S L+H L + A S+ + + AS ++ +L + C
Sbjct: 284 NEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL-DERKASIDVVTYNTMLGGFCRC---- 338
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
K++++ + R+ E+ + S N + LL+ + + A +R
Sbjct: 339 -------------GKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRL 384
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M + + T + I C +G + +AL +++++ G V ++ ++I C K
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A + M + V N N LI G ++ +L EA EM P V+YN
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI G + G +EM N KPD+ TY+ L+ GLC+D K A L + +
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
L + + LI G C + A + +M + N T+ L+ F K D + A
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT 624
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ M + PD + + GL C A+E + + P
Sbjct: 625 VIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%)
Query: 166 AFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDM 225
+ + L + +R E A +EM + + N + N +I + L A L +M
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493
Query: 226 GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
G PTVVS+N LI G C G G A M P++ T++ L+ G C++ K+ A
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
++ + + + + + +N LI+G +G + M + M +++TYN L+ G
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Query: 346 LCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
K G + +A + + K L P+ +++ ++ G C+ A + + + G P
Sbjct: 614 FFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPT 673
Query: 406 ESTFGMLI 413
T+ +L+
Sbjct: 674 VYTWNILV 681
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 195/445 (43%), Gaps = 68/445 (15%)
Query: 42 VKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSIL----- 96
V+ +L + +N +L+ FF W H+++ + +++ + A R++K ++
Sbjct: 103 VEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRK 162
Query: 97 RRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYG 156
++++NV F V + YA K+ +A + F M++Y
Sbjct: 163 KKMLNVET------------------------FCIVMRKYARAQKVDEAIYAFNVMEKYD 198
Query: 157 FLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRAL 216
P L + N LS+L + + A + M RD +P+ T ++++ + K +LP+A
Sbjct: 199 LPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAR 257
Query: 217 ETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF 276
E +M D G C+ P++VT++ +++
Sbjct: 258 EVFREMIDAG---------------CH--------------------PDIVTYSIMVDIL 282
Query: 277 CKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDI 336
CK G++ EA + M + P T Y+ L++ Y E + F EM R+ +K D+
Sbjct: 283 CKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADV 342
Query: 337 LTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRS 396
+N+LI CK + K ++KE+ + PN+ + + ++ R + AF ++R
Sbjct: 343 AVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRK 402
Query: 397 MTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
M + P+ T+ M+I +FC+ ++ + A +V + M + + P S L NGL
Sbjct: 403 MIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERT 461
Query: 457 KRLALELCSEMEAKRLLPEG--FGQ 479
+ A L EM + P G FG+
Sbjct: 462 TQKACVLLEEMIEMGIRPSGVTFGR 486
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
RVS VV ++N F G L + +SE K + + Y+ +I ++I +
Sbjct: 97 RVSQEVV--EDVLNRFRNAGLLTYRFFQWSE-KQRHYEHSVRAYHMMIESTAKIRQYKLM 153
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
L M R + ++ T+ ++ + K +A ++K +L PN F+ L++
Sbjct: 154 WDLINAM-RKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSA 212
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C N +A +++ +M ++P+ T+ +L+ + K + A +V R+M+D PD
Sbjct: 213 LCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPD 271
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
S + + L + GR AL + M+ P F
Sbjct: 272 IVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 174/364 (47%), Gaps = 44/364 (12%)
Query: 154 EYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC-ISPNVYTLNMVICAYCKSGDL 212
E GF + SCN L L + + EVA + DC +PNV T +I +CK G++
Sbjct: 245 ERGFRVGIVSCNKVLKGL-SVDQIEVASRLL-SLVLDCGPAPNVVTFCTLINGFCKRGEM 302
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL---------------- 256
RA + + M+ G+ P +++++ LI GY G+LG+ K+ S
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362
Query: 257 -------------------MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
M +SPNVVT+ LI G C++G+++EA+ ++ ++ +
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
P+ VTY++LI+G+ + GN +G L+E+M + PD++ Y L+ GL K G A
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV-- 415
++ ++ N F++LI G C N + A +++R M G P+ +TF ++ V
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 416 ----FCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR 471
FCK+ +Q+ M ++ D + + + + L +C R A + + + +
Sbjct: 543 MEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602
Query: 472 LLPE 475
+ P+
Sbjct: 603 MEPD 606
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 219/479 (45%), Gaps = 71/479 (14%)
Query: 45 ILLKLKNDDVLSLEFFNW--VHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRII-- 100
+LL L+++ +L++F W + +PS +T+ H L N F A + +I
Sbjct: 75 VLLSLESEPNSALKYFRWAEISGKDPSFYTIA------HVLIRNGMFDVADKVFDEMITN 128
Query: 101 ---NVNVASS-SNTLFDALLCSYRL---CDSSPLVFDAVFKTYANLNKLRDATHTFLRMK 153
+ NV S + DA +C + + C Y ++K A F+
Sbjct: 129 RGKDFNVLGSIRDRSLDADVCKFLMECCC------------RYGMVDK---ALEIFVYST 173
Query: 154 EYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN-VYTLNMVICA-YCKSGD 211
+ G + +S L+SL+ R ++ + ++ R I P+ V V+ A +CK G+
Sbjct: 174 QLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GE 232
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
+ +AL+ + + G +VS N ++ G + + +A ++ SL+ + +PNVVTF T
Sbjct: 233 VTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
LINGFCK G++ A+ +F M+ + P+ + Y+TLI+GY + G G +LF +
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 332 VK-----------------------------------PDILTYNALILGLCKDGKTKKAA 356
VK P+++TY LI GLC+DG+ +A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
+ ++ K + P+ T+S+LI G C N F +Y M +GY P+ +G+L+
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
K A++ ML +S+ + + ++L +G R R AL++ M + P+
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 6/286 (2%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFL------SSLLQLRRAEVA 180
+VF+++ + LN+ +A F M YG P + + + + + + +
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIG 556
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
L + M+R+ IS ++ N+VI K + A + + + + P +V++N +I G
Sbjct: 557 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
YC+ L A ++ L+ PN VT LI+ CK + A R+FS M PN
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
VTY L++ +S+ + E +LFEEM + P I++Y+ +I GLCK G+ +A N+
Sbjct: 677 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 736
Query: 361 ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
+ L+P+ ++ LI G C A +Y M G P++
Sbjct: 737 QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 166/437 (37%), Gaps = 76/437 (17%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+VF + Y L A+ + RM G P + + + L Q R A Y +
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSP----------------- 229
+ + + P++ T + +I +CK G+L E M MG P
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 230 ------------------TVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
VV FN+LI G+C ALK+ LMG Y + P+V TF T
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 272 LI------NGFCKEGK-----------------------------------LHEAYRVFS 290
++ + FCK K + +A + F+
Sbjct: 537 VMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 596
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
+ + P+ VTYNT+I GY + + R+FE + P+ +T LI LCK+
Sbjct: 597 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 656
Query: 351 KTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFG 410
A + + + PNA T+ L+ + E +F+++ M G SP+ ++
Sbjct: 657 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716
Query: 411 MLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
++I CK D A + +D + PD + L G + GR A L M
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
Query: 471 RLLPEGFGQEKIAITSP 487
+ P+ Q ++ +P
Sbjct: 777 GVKPDDLLQRALSEYNP 793
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 161/374 (43%), Gaps = 9/374 (2%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP--LVFDAV 132
T ++ H L R F+ +++ ++ + LL C +P + F +
Sbjct: 234 TKALDFHRLVMERGFRVGIVSCNKVLK-GLSVDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 133 FKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCI 192
+ ++ A F M++ G P L + + + + + + + +
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 193 SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK 252
+V + I Y KSGDL A ++M G+SP VV++ LI G C G + A
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
M + + P++VT+++LI+GFCK G L + ++ +M P+ V Y L++G S
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
+ G MR +M ++ +++ +N+LI G C+ + +A + + + + P+ +
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 373 TFSALI------TGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
TF+ ++ C Q++ M S + + ++I + K + A
Sbjct: 533 TFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 592
Query: 427 QVLRDMLDRSMTPD 440
+ ++++ M PD
Sbjct: 593 KFFNNLIEGKMEPD 606
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 197/459 (42%), Gaps = 35/459 (7%)
Query: 23 IHSQWENLHPLSTSLTPFRVKHILLKLKNDDV---LSLEFFNWVHNCNPSSHTLQTHSIL 79
I ++ + + P L PF K+I+ + D+V L FF W + ++ ++
Sbjct: 40 ILAKKKPIEPALEPLVPFLSKNIITSVIKDEVNRQLGFRFFIWASR-RERLRSRESFGLV 98
Query: 80 LHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANL 139
+ L+ + L + + V+ S Y C + YA +
Sbjct: 99 IDMLSEDNGCDLYWQTLEELKSGGVSVDS----------YCFC--------VLISAYAKM 140
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV----ALAFYREMRRDCISPN 195
A +F RMKE+ P + + N L ++ R EV A A Y EM + SPN
Sbjct: 141 GMAEKAVESFGRMKEFDCRPDVFTYNVILRVMM---REEVFFMLAFAVYNEMLKCNCSPN 197
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
+YT +++ K G A + + M G+SP V++ LISG C +G A K+
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFY 257
Query: 256 LM---GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
M GNY P+ V N L++GFCK G++ EA+ + + Y++LI+G
Sbjct: 258 EMQTSGNY---PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLF 314
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
+ L+ M + +KPDI+ Y LI GL K GK + A L+ + + P+
Sbjct: 315 RARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTY 374
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
++A+I C R E + M+ P+ T +LI C+N A ++ ++
Sbjct: 375 CYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEI 434
Query: 433 LDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR 471
+P +AL +GL + G + A L +ME R
Sbjct: 435 EKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 1/262 (0%)
Query: 217 ETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF 276
+TLE++K G+S F LIS Y G+ A++ M + P+V T+N ++
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 277 CKEGKLHE-AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
+E A+ V++EM N +PN T+ L++G + G ++F++M + P+
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 336 ILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYR 395
+TY LI GLC+ G A L E+ P++ +AL+ G C AF++ R
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Query: 396 SMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
G+ + LI + + A ++ +ML +++ PD + + L GLS+ G
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 456 RKRLALELCSEMEAKRLLPEGF 477
+ AL+L S M +K + P+ +
Sbjct: 353 KIEDALKLLSSMPSKGISPDTY 374
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 164/424 (38%), Gaps = 71/424 (16%)
Query: 73 LQTHSILLHTLANNRKFKTAHSILRRIINVNVA-------------SSSNTLFDALLCSY 119
L+ +S L+ L R++ A + ++ N+ S + + DAL
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDAL---- 358
Query: 120 RLCDSSP--------LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL 171
+L S P ++AV K L + L M E P + + S+
Sbjct: 359 KLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSM 418
Query: 172 LQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMK-------- 223
+ A + E+ + SP+V T N +I CKSG+L A L KM+
Sbjct: 419 CRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLF 478
Query: 224 -------------------------------DMGLSPTVVSFNALISGYCNKGLLGLALK 252
D G SP +VS+N LI+G+C G + ALK
Sbjct: 479 LRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALK 538
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
+ +++ +SP+ VT+NTLING + G+ EA+++F +P Y +L+
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRSLMTWSC 596
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD--KDNLVPN 370
+ L+ + + D T N I K+G+T++A + ELD KD L
Sbjct: 597 RKRKVLVAFNLWMKYLKKISCLDDETANE-IEQCFKEGETERALRRLIELDTRKDEL--T 653
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
++ + G C A ++ + + LI CK E D A++V
Sbjct: 654 LGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFL 713
Query: 431 DMLD 434
LD
Sbjct: 714 YTLD 717
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 179/370 (48%), Gaps = 7/370 (1%)
Query: 111 LFDALLCSYRLCDSSPLVFDAVFKTYANL----NKLRDATHTFLRMKEYGFLPTLESCNA 166
L DALL P ++ F Y +L NK+ A TF M + G P + S
Sbjct: 97 LIDALLSDMETLGFIPDIW--AFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTI 154
Query: 167 FLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETL-EKMKDM 225
++ L + + A+ + M R +SP+ ++ C + + A E + E++K
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSA 214
Query: 226 GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
+ + V +NALISG+C G + A +KS M P++VT+N L+N + L A
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRA 274
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
V +EM + + + +YN L+ + ++ + + + + D+++Y+ LI
Sbjct: 275 EGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIET 334
Query: 346 LCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
C+ T+KA L +E+ + +V N T+++LI NS A ++ MT +G SP+
Sbjct: 335 FCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 406 ESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCS 465
+ ++ CK+ + D A V DM++ +TPD+ ++L +GL R GR A++L
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Query: 466 EMEAKRLLPE 475
+M+ K P+
Sbjct: 455 DMKGKECCPD 464
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 153/344 (44%), Gaps = 36/344 (10%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY-REMRRDCISPNVYT 198
K+ DA + M G P ++C A + L R+ ++A E++ + +
Sbjct: 163 GKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVV 222
Query: 199 LNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL----------- 247
N +I +CK+G + +A M +G P +V++N L++ Y + +L
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 248 --GLALKMKS----LMGNYRVSP------------------NVVTFNTLINGFCKEGKLH 283
G+ L S L + RVS +VV+++TLI FC+
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTR 342
Query: 284 EAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALI 343
+AYR+F EM+ + N VTY +LI + + GN +L ++M + PD + Y ++
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 344 LGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYS 403
LCK G KA + ++ + + P+A ++++LI+G C A +++ M
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECC 462
Query: 404 PNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
P+E TF +I + + A +V M+D+ T D + L
Sbjct: 463 PDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTL 506
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 139/297 (46%), Gaps = 8/297 (2%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ---LRRAEVAL 181
S +V++A+ + ++ A M + G P L + N L+ L+RAE +
Sbjct: 219 STVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEK-MKDMGLSPTVVSFNALISG 240
A EM R I + Y+ N ++ +C+ + + K M+ G VVS++ LI
Sbjct: 279 A---EMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCD-VVSYSTLIET 334
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
+C A ++ M + NVVT+ +LI F +EG A ++ +M ++P+
Sbjct: 335 FCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
+ Y T+++ + GN + +F +M +++ PD ++YN+LI GLC+ G+ +A L +
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Query: 361 ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
++ P+ TF +I G A++++ M G++ + LI C
Sbjct: 455 DMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 161/379 (42%), Gaps = 41/379 (10%)
Query: 137 ANLNK---LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCIS 193
ANL K + +A F M+ + N F+ L++ R E+A A Y +M+ S
Sbjct: 17 ANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFS 76
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
+T + I CK L M+ +G P + +FN + C + +G A++
Sbjct: 77 LIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQT 136
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN------------- 300
M P+VV++ LING + GK+ +A +++ M + V+P+
Sbjct: 137 FFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCH 196
Query: 301 -----------------------TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDIL 337
TV YN LI+G+ + G E L M + +PD++
Sbjct: 197 ARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLV 256
Query: 338 TYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ-IYRS 396
TYN L+ + K+A ++ E+ + + +A +++ L+ C ++ ++ + + +
Sbjct: 257 TYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKE 316
Query: 397 MTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
M G+ + ++ LI FC+ + A ++ +M + M + ++L R G
Sbjct: 317 MEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGN 375
Query: 457 KRLALELCSEMEAKRLLPE 475
+A +L +M L P+
Sbjct: 376 SSVAKKLLDQMTELGLSPD 394
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 6/264 (2%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C+ + ++ + Y + N L+ A M G S N L ++ +
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCY 310
Query: 182 AF-YREM--RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI 238
F +EM R C +V + + +I +C++ + +A E+M+ G+ VV++ +LI
Sbjct: 311 NFMVKEMEPRGFC---DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLI 367
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
+ +G +A K+ M +SP+ + + T+++ CK G + +AY VF++M +
Sbjct: 368 KAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEIT 427
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
P+ ++YN+LI+G + G ++LFE+M + PD LT+ +I GL + K A +
Sbjct: 428 PDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487
Query: 359 VKELDKDNLVPNASTFSALITGQC 382
++ + LI C
Sbjct: 488 WDQMMDKGFTLDRDVSDTLIKASC 511
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 125/299 (41%), Gaps = 5/299 (1%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A+ + EMR + N I + A MK MG S +++ IS
Sbjct: 28 AVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFIS 87
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
G C L + S M P++ FN ++ C+E K+ A + F M P
Sbjct: 88 GLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREP 147
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+ V+Y LING + G + ++ M R+ V PD AL++GLC K A +V
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMV 207
Query: 360 KELDKDNLVP-NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
E K V + ++ALI+G C E+A + M+ IG P+ T+ +L++ +
Sbjct: 208 AEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYD 267
Query: 419 NEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
N A V+ +M+ + D + YN L + + + C K + P GF
Sbjct: 268 NNMLKRAEGVMAEMVRSGIQLD----AYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF 322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%)
Query: 267 VTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
+ + + I K G + A +VF EM+ ++ + YN I + E ++ +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
M TY+ I GLCK K L+ +++ +P+ F+ + C N
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
A Q + M G P+ ++ +LI+ + AV++ M+ ++PD+ +A
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 447 LYNGLSRCGRKRLALELCSE 466
L GL + LA E+ +E
Sbjct: 190 LVVGLCHARKVDLAYEMVAE 209
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 184/401 (45%), Gaps = 23/401 (5%)
Query: 42 VKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIIN 101
V +L + ++D +L W +C H+ + + + L +K+ + R+
Sbjct: 90 VHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRG 149
Query: 102 VNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTL 161
+ + NT+ + + +A + +A F R+ E+G
Sbjct: 150 DKLVTL-NTV------------------AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNT 190
Query: 162 ESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEK 221
ES N L +L + +R E A +++ I+PN +T N+ I +CK+ + AL T+++
Sbjct: 191 ESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 222 MKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGK 281
MK G P V+S+ +I YC + +M S M PN +T+ T+++ + +
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE-EMGRNQVKPDILTYN 340
EA RV + MK + P+++ YN LI+ ++ G E R+F EM V + TYN
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLV-PNASTFSALITGQCVRNNSERAFQIYRSMTS 399
++I C + KA L+KE++ NL P+ T+ L+ R + ++ + M +
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 400 IGY-SPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
+ S +EST+ LI C+ + A + +M+ + +TP
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 246 LLGLALK---MKSLMGNYRVSPNVVTFNT---LINGFCKEGKLHEAYRVFSEMKVANVAP 299
+LG A K MK + R +VT NT ++ F G+ EA +F + +
Sbjct: 130 ILGKAKKWDRMKEFVERMR-GDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEK 188
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
NT + N L++ + E + ++ ++ + P+ T+N I G CK + ++A +
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
+E+ P +++ +I C + + +++ M + G PN T+ ++S
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
++F+ A++V M PDS + L + L+R GR
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 4/179 (2%)
Query: 302 VTYNT---LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
VT NT ++ ++ G E + +F+ +G ++ + + N L+ LCK+ + ++A +
Sbjct: 153 VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV 212
Query: 359 VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
+ +L K ++ PNA TF+ I G C N E A + M G+ P ++ +I +C+
Sbjct: 213 LLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 419 NEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+F ++L +M P+S + + + L+ AL + + M+ P+
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 184/401 (45%), Gaps = 23/401 (5%)
Query: 42 VKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIIN 101
V +L + ++D +L W +C H+ + + + L +K+ + R+
Sbjct: 90 VHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRG 149
Query: 102 VNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTL 161
+ + NT+ + + +A + +A F R+ E+G
Sbjct: 150 DKLVTL-NTV------------------AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNT 190
Query: 162 ESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEK 221
ES N L +L + +R E A +++ I+PN +T N+ I +CK+ + AL T+++
Sbjct: 191 ESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 222 MKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGK 281
MK G P V+S+ +I YC + +M S M PN +T+ T+++ + +
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE-EMGRNQVKPDILTYN 340
EA RV + MK + P+++ YN LI+ ++ G E R+F EM V + TYN
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLV-PNASTFSALITGQCVRNNSERAFQIYRSMTS 399
++I C + KA L+KE++ NL P+ T+ L+ R + ++ + M +
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 400 IGY-SPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
+ S +EST+ LI C+ + A + +M+ + +TP
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 246 LLGLALK---MKSLMGNYRVSPNVVTFNT---LINGFCKEGKLHEAYRVFSEMKVANVAP 299
+LG A K MK + R +VT NT ++ F G+ EA +F + +
Sbjct: 130 ILGKAKKWDRMKEFVERMR-GDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEK 188
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
NT + N L++ + E + ++ ++ + P+ T+N I G CK + ++A +
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
+E+ P +++ +I C + + +++ M + G PN T+ ++S
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
++F+ A++V M PDS + L + L+R GR
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 4/179 (2%)
Query: 302 VTYNT---LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
VT NT ++ ++ G E + +F+ +G ++ + + N L+ LCK+ + ++A +
Sbjct: 153 VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV 212
Query: 359 VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
+ +L K ++ PNA TF+ I G C N E A + M G+ P ++ +I +C+
Sbjct: 213 LLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 419 NEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+F ++L +M P+S + + + L+ AL + + M+ P+
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 182/410 (44%), Gaps = 61/410 (14%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
+L +++ LL + +++ + SI+ + S T D++ F+A
Sbjct: 79 SLISYTTLLAAMTVQKQYGSISSIVSEV------EQSGTKLDSIF------------FNA 120
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL----LQLRRAEVALAFYREM 187
V ++ + DA L+MKE G PT + N + R +E+ E
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL---------- 237
D + PN+ T N+++ A+CK + A E ++KM++ G+ P V++N +
Sbjct: 181 NVD-VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 238 ---------------------------ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
+ GYC +G + L+ M RV N+V FN
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
+LINGF + V + MK NV + +TY+T++N +S G E ++F+EM +
Sbjct: 300 SLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKA 359
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
VKPD Y+ L G + + KKA L++ L ++ PN F+ +I+G C + + A
Sbjct: 360 GVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDA 418
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
+++ M G SPN TF L+ + + + A +VL+ M + P+
Sbjct: 419 MRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 468
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 158/325 (48%), Gaps = 5/325 (1%)
Query: 144 DATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVI 203
+A F + E G P+L S L+++ ++ + E+ + + N VI
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 204 CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM---GNY 260
A+ +SG++ A++ L KMK++GL+PT ++N LI GY G + ++ LM GN
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN-CET 319
V PN+ TFN L+ +CK+ K+ EA+ V +M+ V P+TVTYNT+ Y Q G
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 320 GMRLFEEM-GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALI 378
+ E+M + + KP+ T ++ G C++G+ + V+ + + + N F++LI
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 379 TGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMT 438
G + + ++ M + T+ +++ + + A QV ++M+ +
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Query: 439 PDSGILSALYNGLSRCGRKRLALEL 463
PD+ S L G R + A EL
Sbjct: 363 PDAHAYSILAKGYVRAKEPKKAEEL 387
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 119/248 (47%), Gaps = 12/248 (4%)
Query: 213 PRALETLEK-MKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
P +T+ K + + G P+++S+ L++ + G + S + + + FN
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNA 120
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE---EMG 328
+IN F + G + +A + +MK + P T TYNTLI GY G E L + E G
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180
Query: 329 RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT-----GQCV 383
V P+I T+N L+ CK K ++A +VK++++ + P+ T++ + T G+ V
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETV 240
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
R SE + + + PN T G+++ +C+ ++ +R M + + + +
Sbjct: 241 RAESE---VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 444 LSALYNGL 451
++L NG
Sbjct: 298 FNSLINGF 305
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 206/462 (44%), Gaps = 55/462 (11%)
Query: 66 CNPSSHTLQTHSILLHTLAN---NRKFKTAHSILRRIINVNVASSS---------NTLFD 113
C PS T S++L ++ + + +L I++NV +++ N L
Sbjct: 300 CVPSQETYT--SVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVS 357
Query: 114 ALLCSYRLCDSSP----LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLS 169
AL+ ++ P + F + + + ++ A + +M+ G P++ + +
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 170 SLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSP 229
L+ ++ E AL + E ++ NV+ N ++ CK G A E L KM+ G+ P
Sbjct: 418 GWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 230 TVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF 289
VVS+N ++ G+C + + LA + S + + PN T++ LI+G + A V
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 290 SEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL-------------------------- 323
+ M +N+ N V Y T+ING ++G L
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 324 ----------FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
+EEM N + P+++TY +L+ GLCK+ + +A + E+ + +
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
+ ALI G C R+N E A ++ + G +P++ + LIS F + A+ + + ML
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 434 DRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ D G + L +GL + G LA EL +EM+A L+P+
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPD 758
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 144/278 (51%), Gaps = 2/278 (0%)
Query: 173 QLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVV 232
Q +A LA E +R C+S Y N +I + K G++ A+ E+M G+SP V+
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSY--NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
++ +L++G C + AL+M+ M N V ++ + LI+GFCK + A +FSE+
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
+ P+ YN+LI+G+ +GN + L+++M ++ ++ D+ TY LI GL KDG
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNL 740
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
A+ L E+ LVP+ ++ ++ G + + +++ M +PN + +
Sbjct: 741 ILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 800
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
I+ + + D A ++ +MLD+ + PD L +G
Sbjct: 801 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 213/481 (44%), Gaps = 56/481 (11%)
Query: 50 KNDDVLS-LEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS 108
KN+D++S L F+ + PS +++ T S+L+ N + + A +++ + + S
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSV-TFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 109 ---NTLFDALLCSYRLCDSSPLVFDAVFKT-YANL-------------NKLRDATHTFLR 151
+T+ L + ++ L FD F+T AN+ K +AT +
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKL-FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNM---------- 201
M+ G P + S N + + + ++A + + + PN YT ++
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 202 -------------------------VICAYCKSGDLPRALETLEKM-KDMGLSPTVVSFN 235
+I CK G +A E L M ++ L + +S+N
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
++I G+ +G + A+ M +SPNV+T+ +L+NG CK ++ +A + EMK
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
V + Y LI+G+ + N E+ LF E+ + P YN+LI G G A
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV 415
+L K++ KD L + T++ LI G N A ++Y M ++G P+E + ++++
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG 768
Query: 416 FCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
K F V++ +M ++TP+ I +A+ G R G A L EM K +LP+
Sbjct: 769 LSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 828
Query: 476 G 476
G
Sbjct: 829 G 829
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 154/297 (51%), Gaps = 5/297 (1%)
Query: 179 VALAFYREMRRD--CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNA 236
+A + REM+ C+ P+ T VI A K G++ A+ ++M G+S VV+ +
Sbjct: 286 MANSLLREMKEKKLCV-PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATS 344
Query: 237 LISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
LI+G+C L AL + M SPN VTF+ LI F K G++ +A + +M+V
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
+ P+ +T+I G+ + E ++LF+E + ++ N ++ LCK GKT +A
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEAT 463
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
L+ +++ + PN +++ ++ G C + N + A ++ ++ G PN T+ +LI
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM-EAKRL 472
+N D A++V+ M ++ + + + NGL + G+ A EL + M E KRL
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 148/289 (51%), Gaps = 1/289 (0%)
Query: 93 HSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRM 152
+I+ + V S + L ++ RLC S + ++++ + ++ A + M
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSC-MSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 153 KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDL 212
G P + + + ++ L + R + AL EM+ + ++ +I +CK ++
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTL 272
A ++ + GL+P+ +N+LISG+ N G + AL + M + ++ T+ TL
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQV 332
I+G K+G L A +++EM+ + P+ + Y ++NG S+ G +++FEEM +N V
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQ 381
P++L YNA+I G ++G +A L E+ ++P+ +TF L++GQ
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQ 839
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 162/364 (44%), Gaps = 41/364 (11%)
Query: 146 THTFLR-MKEYGF-LPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVI 203
++ LR MKE +P+ E+ + + + ++ + A+ EM D IS NV +I
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLI 346
Query: 204 CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVS 263
+CK+ DL AL +KM+ G SP V+F+ LI + G + AL+ M ++
Sbjct: 347 TGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT 406
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
P+V +T+I G+ K K EA ++F E +A N NT+++ + G + L
Sbjct: 407 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATEL 465
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
+M + P++++YN ++LG C+ A + + + L PN T+S LI G C
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG-CF 524
Query: 384 RNNSER-AFQIYRSMTSIGYSPNESTFGMLISVFC------------------------- 417
RN+ E+ A ++ MTS N + +I+ C
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 418 -----------KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSE 466
K + D AV +M ++P+ ++L NGL + R ALE+ E
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 467 MEAK 470
M+ K
Sbjct: 645 MKNK 648
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTL 199
N++ A MK G + + A + + E A A + E+ + ++P+
Sbjct: 633 NRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIY 692
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
N +I + G++ AL+ +KM GL + ++ LI G G L LA ++ + M
Sbjct: 693 NSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQA 752
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
+ P+ + + ++NG K+G+ + ++F EMK NV PN + YN +I G+ + GN +
Sbjct: 753 VGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDE 812
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
RL +EM + PD T++ L+ G + + +AA+L
Sbjct: 813 AFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 187/435 (42%), Gaps = 35/435 (8%)
Query: 42 VKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANN-RKFKTAHSILRRII 100
V +LL +N+ +L F+NW S +L+H L ++ + A +L R
Sbjct: 75 VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRY- 133
Query: 101 NVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPT 160
V++S+ T ++L S +L DS+ K +GF
Sbjct: 134 ---VSTSNPTPMASVLVS-KLVDSA---------------------------KSFGFEVN 162
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ N L++ + R+ + A+ +M + P +N + A + L A E
Sbjct: 163 SRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYS 222
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
+M +G+ V+ L+ + AL++ S P+ + ++ + CK
Sbjct: 223 RMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTL 282
Query: 281 KLHEAYRVFSEMKVANV-APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTY 339
L A + EMK + P+ TY ++I + GN + +RL +EM + + +++
Sbjct: 283 DLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAA 342
Query: 340 NALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTS 399
+LI G CK+ A L +++K+ PN+ TFS LI E+A + Y+ M
Sbjct: 343 TSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV 402
Query: 400 IGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL 459
+G +P+ +I + K + + A+++ + + + + + + + + L + G+
Sbjct: 403 LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDE 461
Query: 460 ALELCSEMEAKRLLP 474
A EL S+ME++ + P
Sbjct: 462 ATELLSKMESRGIGP 476
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 1/260 (0%)
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
++ K G +FN L++ Y A+ + + M V P N ++ +
Sbjct: 151 VDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQ 210
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
L EA ++S M V + VT L+ + + + +PD L
Sbjct: 211 RNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLL 270
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDNL-VPNASTFSALITGQCVRNNSERAFQIYRSM 397
Y+ + CK A +L++E+ + L VP+ T++++I + N + A ++ M
Sbjct: 271 YSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEM 330
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
S G S N LI+ CKN D A+ + M +P+S S L + G
Sbjct: 331 LSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEM 390
Query: 458 RLALELCSEMEAKRLLPEGF 477
ALE +ME L P F
Sbjct: 391 EKALEFYKKMEVLGLTPSVF 410
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 4/282 (1%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
RM E G P ++ L ++ E AL +M I +V N +I CK G
Sbjct: 35 RMVEEGHQPY----GTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDG 90
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
A +M D G+ P V++++ +I +C G A ++ M +++P+VVTF+
Sbjct: 91 HHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS 150
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
LIN KEGK+ EA ++ +M + P T+TYN++I+G+ + R+ + M
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
PD++T++ LI G CK + + E+ + +V N T++ LI G C + + A
Sbjct: 211 SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 270
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
+ M S G +PN TF +++ C ++ A +L D+
Sbjct: 271 QDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 144/298 (48%), Gaps = 10/298 (3%)
Query: 110 TLFDALLCSYRLCDSSPLV----------FDAVFKTYANLNKLRDATHTFLRMKEYGFLP 159
TL + L C R+ + LV + + + A + +M+E
Sbjct: 15 TLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKA 74
Query: 160 TLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETL 219
+ NA + L + A + EM I P+V T + +I ++C+SG A + L
Sbjct: 75 HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLL 134
Query: 220 EKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKE 279
M + ++P VV+F+ALI+ +G + A ++ M + P +T+N++I+GFCK+
Sbjct: 135 RDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQ 194
Query: 280 GKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTY 339
+L++A R+ M + +P+ VT++TLINGY + + GM +F EM R + + +TY
Sbjct: 195 DRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 254
Query: 340 NALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
LI G C+ G A +L+ + + PN TF +++ C + +AF I +
Sbjct: 255 TTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 141/308 (45%), Gaps = 6/308 (1%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD 211
M E G P + + ++ L R ALA M + P +I CK GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
AL L KM++ + VV +NA+I C G A + + M + + P+V+T++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
+I+ FC+ G+ +A ++ +M + P+ VT++ LIN + G ++ +M R
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 332 VKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAF 391
+ P +TYN++I G CK + A ++ + + P+ TFS LI G C +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 392 QIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
+I+ M G N T+ LI FC+ D D A +L M+ + P+ ++ L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 452 SRCGRKRL 459
C +K L
Sbjct: 297 --CSKKEL 302
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 124/238 (52%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
++++A+ A + F M + G P + + + + S + R A R+
Sbjct: 77 VIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRD 136
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M I+P+V T + +I A K G + A E M G+ PT +++N++I G+C +
Sbjct: 137 MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A +M M + SP+VVTF+TLING+CK ++ +F EM + NTVTY T
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
LI+G+ Q+G+ + L M + V P+ +T+ +++ LC + +KA ++++L K
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 144/281 (51%), Gaps = 4/281 (1%)
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
P+V T ++ C G + +AL +++M + G P + +I+G C G AL +
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
S M + +VV +N +I+ CK+G A +F+EM + P+ +TY+ +I+ + +
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
G +L +M Q+ PD++T++ALI L K+GK +A + ++ + + P T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
++++I G C ++ A ++ SM S SP+ TF LI+ +CK + D +++ +M
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 434 DRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
R + ++ + L +G + G A +L + M + + P
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAP 284
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
P+VVTF TL+NG C EG++ +A + M P Y T+ING ++G+ E+ + L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
+M +K ++ YNA+I LCKDG A NL E+ + P+ T+S +I C
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
A Q+ R M +P+ TF LI+ K A ++ DML R + P +
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 444 LSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+++ +G + R A + M +K P+
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPD 215
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 203/442 (45%), Gaps = 35/442 (7%)
Query: 46 LLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRI------ 99
L+K + D L+ FN +H T+S+LL L ++KF +IL ++
Sbjct: 62 LMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCR 121
Query: 100 ------INVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMK 153
+N+ S + L D ++ + L V ++ LN L D+ L K
Sbjct: 122 FQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRK 181
Query: 154 -------EYGFLPTLESCNAFLSSLLQLRRAEVALAF--YREMRRDCIS-PNVYTLNMVI 203
G P N + + ++ AF EM+R IS PN T + ++
Sbjct: 182 LLLYAKHNLGLQPNTCIFNILVKH--HCKNGDINFAFLVVEEMKRSGISYPNSITYSTLM 239
Query: 204 -CAYCKSGDLPRALETLEKMKDM----GLSPTVVSFNALISGYCNKGLLGLALKMKSLMG 258
C + S R+ E +E +DM G+SP V+FN +I+G+C G + A K+ M
Sbjct: 240 DCLFAHS----RSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMK 295
Query: 259 NYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCE 318
+PNV ++ L+NGFCK GK+ EA + F E+K + +TV Y TL+N + + G +
Sbjct: 296 KNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETD 355
Query: 319 TGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALI 378
M+L EM ++ + D LTYN ++ GL +G++++A ++ + + + N ++ ++
Sbjct: 356 EAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIIL 415
Query: 379 TGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMT 438
C E+A + M+ G P+ +T+ L+ C++ + V+VL L +
Sbjct: 416 NALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLI 475
Query: 439 PDSGILSALYNGLSRCGRKRLA 460
P A+ + C ++L
Sbjct: 476 PGPKSWGAVVESI--CKERKLV 495
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 153/308 (49%), Gaps = 2/308 (0%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGF-LPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+F+ + K + + A MK G P + + + L R++ A+ + +
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 187 M-RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
M ++ ISP+ T N++I +C++G++ RA + L+ MK G +P V +++AL++G+C G
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
+ A + + + + V + TL+N FC+ G+ EA ++ EMK + +T+TYN
Sbjct: 318 KIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
++ G S G E +++ ++ G V + +Y ++ LC +G+ +KA + + +
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSER 437
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
+ P+ +T++ L+ C +E ++ IG P ++G ++ CK
Sbjct: 438 GIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHV 497
Query: 426 VQVLRDML 433
++L ++
Sbjct: 498 FELLDSLV 505
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 37/277 (13%)
Query: 224 DMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVS-PNVVTFNTLINGFCKEGKL 282
++GL P FN L+ +C G + A + M +S PN +T++TL++ +
Sbjct: 189 NLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRS 248
Query: 283 HEAYRVFSEM-KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNA 341
EA +F +M ++P+ VT+N +ING+ + G E ++ + M +N P++ Y+A
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 342 LILGLCKDGKTKKAANLVKELDKDNLV--------------------------------- 368
L+ G CK GK ++A E+ K L
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 369 --PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ T++ ++ G SE A Q+ S G N+ ++ ++++ C N + + AV
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
+ L M +R + P + L L G + + +
Sbjct: 429 KFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRV 465
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 192/439 (43%), Gaps = 20/439 (4%)
Query: 37 LTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSIL 96
+TP V +L KL ND ++ +FF+W H ++ + L N F+ A L
Sbjct: 123 VTPSIVAEVL-KLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQ-L 180
Query: 97 RRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYG 156
+++ S F+ L+ + +A+ + + + +MK++G
Sbjct: 181 PELMDSQGRPPSEKQFEILI-----------------RMHADNRRGLRVYYVYEKMKKFG 223
Query: 157 FLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRAL 216
F P + N + +L++ ++ALA Y + + D + T +++ CK+G + L
Sbjct: 224 FKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEML 283
Query: 217 ETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF 276
E L++M++ P V ++ A+I ++G L +L++ M + P+V+ + TL+ G
Sbjct: 284 EILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGL 343
Query: 277 CKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDI 336
CK+G++ Y +F EMK + + Y LI G+ G + L+E++ + DI
Sbjct: 344 CKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADI 403
Query: 337 LTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRS 396
YNA+I GLC + KA L + ++ L P+ T S ++ V N +
Sbjct: 404 GIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLER 463
Query: 397 MTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
+ +GY P + C +E+ + + +L + + L L + G
Sbjct: 464 IGELGY-PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGD 522
Query: 457 KRLALELCSEMEAKRLLPE 475
+ +L L EM P+
Sbjct: 523 IQKSLSLFYEMRKLGFEPD 541
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
N + +L ++ + +L+ + EMR+ P+ + ++ IC + + GD+ A EK+ +
Sbjct: 511 NILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIE 570
Query: 225 MGLSPTVVSFNALISGYCNKGLL-GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLH 283
M P++ ++ +L G C G + + L ++ +GN P + + CK
Sbjct: 571 MSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAE 630
Query: 284 EAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQV--KPDILTYNA 341
+ +V EM V N V Y +I+G S+ G + +F E+ + +V + D++ Y
Sbjct: 631 KVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEE 690
Query: 342 LILGLCKDGKTKKAANLV 359
+++ K KK A+LV
Sbjct: 691 MLIEQTK----KKTADLV 704
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 140/324 (43%), Gaps = 14/324 (4%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
++ + + + K+R A + + + + G++ + NA + L + + + A ++
Sbjct: 370 IYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVA 429
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMG--LSPTVVSFNALISGYCNKG 245
+ + P+ TL+ ++ AY L LE++ ++G +S + F L+ K
Sbjct: 430 IEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKN 489
Query: 246 LLGL----ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
+ L LK K G+ VS +N L+ K G + ++ +F EM+ P++
Sbjct: 490 AMALDVFYILKTK---GHGSVS----VYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDS 542
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
+Y+ I + + G+ + E++ P I Y +L GLC+ G+ LV+E
Sbjct: 543 SSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRE 602
Query: 362 -LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
L P ++ + C +N+E+ ++ M G NE + +IS K+
Sbjct: 603 CLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHG 662
Query: 421 DFDGAVQVLRDMLDRSMTPDSGIL 444
A +V ++ R + ++ ++
Sbjct: 663 TIKVAREVFTELKKRKVMTEADMV 686
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 77/199 (38%), Gaps = 9/199 (4%)
Query: 283 HEAYRVFSEM-KVANVAPNTVTYNTLINGYSQIGN-CETGMRLFEEMGRNQ-VKPDILTY 339
H V SE+ K+ V P +++ ++GN + F G+ + K D Y
Sbjct: 108 HWGPSVVSELNKLRRVTP------SIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAY 161
Query: 340 NALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTS 399
NA L ++G + A L + +D P+ F LI R + +Y M
Sbjct: 162 NAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKK 221
Query: 400 IGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL 459
G+ P + ++ KN FD A+ V D + + +S L GL + GR
Sbjct: 222 FGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEE 281
Query: 460 ALELCSEMEAKRLLPEGFG 478
LE+ M P+ F
Sbjct: 282 MLEILQRMRENLCKPDVFA 300
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 172/383 (44%), Gaps = 54/383 (14%)
Query: 56 SLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDAL 115
+L+FF W H TH ++ L K A IL + V +
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDED------ 186
Query: 116 LCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLR 175
+F + ++Y ++++ F +MK+ G T++S N+ +L+
Sbjct: 187 ------------MFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRG 234
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
R +A ++ KM G+ PT ++N
Sbjct: 235 RYMMAKRYF-----------------------------------NKMVSEGVEPTRHTYN 259
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
++ G+ L AL+ M +SP+ TFNT+INGFC+ K+ EA ++F EMK
Sbjct: 260 LMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGN 319
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
+ P+ V+Y T+I GY + + G+R+FEEM + ++P+ TY+ L+ GLC GK +A
Sbjct: 320 KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA 379
Query: 356 ANLVKELDKDNLVP-NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
N++K + ++ P + S F L+ Q + A ++ ++M ++ +G+LI
Sbjct: 380 KNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIE 439
Query: 415 VFCKNEDFDGAVQVLRDMLDRSM 437
CK ++ A+++L ++++ +
Sbjct: 440 NQCKASAYNRAIKLLDTLIEKEI 462
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/424 (19%), Positives = 144/424 (33%), Gaps = 88/424 (20%)
Query: 130 DAVFKTYAN----LNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYR 185
DA F T N K+ +A F+ MK P++ S + L + R + L +
Sbjct: 290 DATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFE 349
Query: 186 EMRRDCISPNVYTLNMVICAYC------------------------------------KS 209
EMR I PN T + ++ C K+
Sbjct: 350 EMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKA 409
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM---------------- 253
GD+ A E L+ M + + + LI C A+K+
Sbjct: 410 GDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDT 469
Query: 254 ------------KSLMGNYRVSPNVVTF--------------NTLINGFCKEGKLHEAYR 287
+ L N + + V F N LI G KEG +Y
Sbjct: 470 LEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYE 529
Query: 288 VFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLC 347
+ M V + Y LI Y G + M + PD + ++I L
Sbjct: 530 ILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLF 589
Query: 348 KDGKTKKAANLVK-ELDKD-NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
+DG+ + A+ ++ +DK+ + N + ++ +R + E A + G++ +
Sbjct: 590 EDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTAD 649
Query: 406 ESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALE-LC 464
L+SV + A+++L L+R ++ + + + L G+ A LC
Sbjct: 650 ---LDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLC 706
Query: 465 SEME 468
ME
Sbjct: 707 KIME 710
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 142/282 (50%), Gaps = 7/282 (2%)
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY-C 242
YR+M ++ + + +L Y K+G A + E+M + +V+SFNAL+S Y
Sbjct: 103 YRDMSKEGFAARIISL------YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRL 156
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
+K + L G + P++V++NTLI C++ L EA + E++ + P+ V
Sbjct: 157 SKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIV 216
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
T+NTL+ G E G ++ +M V DI TYNA +LGL + K+K+ NL EL
Sbjct: 217 TFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL 276
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
L P+ +F+A+I G + A Y+ + GY P+++TF +L+ CK DF
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDF 336
Query: 423 DGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELC 464
+ A+++ ++ + L L + L + ++ A E+
Sbjct: 337 ESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 125/255 (49%), Gaps = 3/255 (1%)
Query: 178 EVALAFYREM-RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMK-DMGLSPTVVSFN 235
E A + EM RDC +V + N ++ AY S E ++ + + P +VS+N
Sbjct: 126 ENAQKVFEEMPNRDC-KRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYN 184
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
LI C K L A+ + + N + P++VTFNTL+ +G+ ++++M
Sbjct: 185 TLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEK 244
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
NVA + TYN + G + + + LF E+ + +KPD+ ++NA+I G +GK +A
Sbjct: 245 NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEA 304
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV 415
KE+ K P+ +TF+ L+ C + E A ++++ S Y ++T L+
Sbjct: 305 EAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDE 364
Query: 416 FCKNEDFDGAVQVLR 430
K + A ++++
Sbjct: 365 LVKGSKREEAEEIVK 379
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 85/222 (38%), Gaps = 20/222 (9%)
Query: 89 FKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLV-------------------F 129
F+ A + + N + S + F+ALL +YRL +V +
Sbjct: 125 FENAQKVFEEMPNRDCKRSVLS-FNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSY 183
Query: 130 DAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRR 189
+ + K + L +A ++ G P + + N L S + E+ + +M
Sbjct: 184 NTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVE 243
Query: 190 DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGL 249
++ ++ T N + + ++K GL P V SFNA+I G N+G +
Sbjct: 244 KNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDE 303
Query: 250 ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
A + + P+ TF L+ CK G A +F E
Sbjct: 304 AEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 191/426 (44%), Gaps = 57/426 (13%)
Query: 103 NVASSSNTLFDALLCS----------YRLCDSSPLVFDAVFKTYANLNKLRD------AT 146
NVA S+ L+D LC L SS ++ DA TY +N+L A
Sbjct: 105 NVAHSTQLLYD--LCKANRLKKAIRVIELMVSSGIIPDASAYTYL-VNQLCKRGNVGYAM 161
Query: 147 HTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAY 206
+M+++G+ + NA + L L +L F + + ++PN +T + ++ A
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 207 CKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNV 266
K A++ L+++ G P +VS+N L++G+C +G A+ + + NV
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 281
Query: 267 VTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
V++N L+ C +G+ EA + +EM + AP+ VTYN LIN + G E +++ +E
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE 341
Query: 327 M--GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSAL------- 377
M G +Q + +YN +I LCK+GK + E+ PN T++A+
Sbjct: 342 MSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHN 401
Query: 378 ----------------------------ITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
IT C + N+ AFQ+ MT G+ P+ T+
Sbjct: 402 SKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTY 461
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLD-RSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
LI C F GA++VL M + + P +A+ GL + R LA+E+ M
Sbjct: 462 SALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMV 521
Query: 469 AKRLLP 474
K+ +P
Sbjct: 522 EKKRMP 527
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 145/294 (49%), Gaps = 2/294 (0%)
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
G P + L L + R + A+ M I P+ ++ CK G++ A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 216 LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLING 275
++ +EKM+D G V++NAL+ G C G L +L+ + ++PN T++ L+
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 276 FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
KE EA ++ E+ V PN V+YN L+ G+ + G + M LF E+ K +
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 336 ILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYR 395
+++YN L+ LC DG+ ++A +L+ E+D + P+ T++ LI +E+A Q+ +
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 396 SMTSIG--YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
M+ + +++ +I+ CK D V+ L +M+ R P+ G +A+
Sbjct: 341 EMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 139/326 (42%), Gaps = 38/326 (11%)
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
G P L S N L+ + R + A+A +RE+ NV + N+++ C G A
Sbjct: 241 GGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEA 300
Query: 216 LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM--GNYRVSPNVVTFNTLI 273
L +M +P+VV++N LI+ G AL++ M GN++ ++N +I
Sbjct: 301 NSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVI 360
Query: 274 NGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN---------------------------- 305
CKEGK+ + EM PN TYN
Sbjct: 361 ARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKC 420
Query: 306 -------TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
++I + GN +L EM R PD TY+ALI GLC +G A +
Sbjct: 421 CTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEV 480
Query: 359 VKELDK-DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
+ +++ +N P F+A+I G C ++ A +++ M PNE+T+ +L+
Sbjct: 481 LSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIA 540
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGI 443
++ + A +VL ++ R + + +
Sbjct: 541 HEDELELAKEVLDELRLRKVIGQNAV 566
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 120/257 (46%)
Query: 211 DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFN 270
+L + LE + G P V L+ C L A+++ LM + + P+ +
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 271 TLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
L+N CK G + A ++ +M+ NTVTYN L+ G +G+ ++ E + +
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
+ P+ TY+ L+ K+ T +A L+ E+ PN +++ L+TG C ++ A
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
++R + + G+ N ++ +L+ C + ++ A +L +M P + L N
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 451 LSRCGRKRLALELCSEM 467
L+ GR AL++ EM
Sbjct: 326 LAFHGRTEQALQVLKEM 342
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
PNV L+ CK +L +A RV M + + P+ Y L+N + GN M+L
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
E+M + + +TYNAL+ GLC G ++ V+ L + L PNA T+S L+
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
++ A ++ + G PN ++ +L++ FCK D A+ + R++ P G
Sbjct: 224 ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL------PAKGF 277
Query: 444 LSAL--YNGLSRC----GRKRLALELCSEMEAKRLLP 474
+ + YN L RC GR A L +EM+ P
Sbjct: 278 KANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAP 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%)
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
E L +++ + PN L+ + + +R+ E M + + PD
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMT 398
Y L+ LCK G A LV++++ N T++AL+ G C+ + ++ Q +
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 399 SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKR 458
G +PN T+ L+ K D AV++L +++ + P+ + L G + GR
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTD 263
Query: 459 LALELCSEMEAK 470
A+ L E+ AK
Sbjct: 264 DAMALFRELPAK 275
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 20/246 (8%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVN----VASSSNTLFDALLCS--------- 118
++ T++IL+++LA + + + A +L+ + N V ++S A LC
Sbjct: 315 SVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVK 374
Query: 119 ------YRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
YR C + ++A+ + +K+++A + + T + + ++SL
Sbjct: 375 CLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLC 434
Query: 173 QLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDM-GLSPTV 231
+ A EM R P+ +T + +I C G A+E L M++ PTV
Sbjct: 435 RKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTV 494
Query: 232 VSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
+FNA+I G C LA+++ +M + PN T+ L+ G E +L A V E
Sbjct: 495 DNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDE 554
Query: 292 MKVANV 297
+++ V
Sbjct: 555 LRLRKV 560
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 190/435 (43%), Gaps = 51/435 (11%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
+L +++ LL + +++ + SI+ + S T D++ F+A
Sbjct: 79 SLISYTTLLAAMTVQKQYGSISSIVSEV------EQSGTKLDSIF------------FNA 120
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL----LQLRRAEVALAFYREM 187
V ++ + DA L+MKE G PT + N + R +E+ E
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG-- 245
D + PN+ T N+++ A+CK + A E ++KM++ G+ P V++N + + Y KG
Sbjct: 181 NVD-VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
+ + ++ ++ + PN T ++ G+C+EG++ + R MK V N V +N
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 306 TLINGYSQ-------------------------IGNCETGMRLFEEMGRNQVKPDILTYN 340
+LING+ + +GN + +++ M VK D++TY+
Sbjct: 300 SLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYS 359
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
++ G +KAA + KE+ K + P+A +S L G ++A ++ ++ +
Sbjct: 360 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-V 418
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
PN F +IS +C N D A++V M ++P+ L G + A
Sbjct: 419 ESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKA 478
Query: 461 LELCSEMEAKRLLPE 475
E+ M + PE
Sbjct: 479 EEVLQMMRGCGVKPE 493
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 159/350 (45%), Gaps = 30/350 (8%)
Query: 144 DATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVI 203
+A F + E G P+L S L+++ ++ + E+ + + N VI
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 204 CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM---GNY 260
A+ +SG++ A++ L KMK++GL+PT ++N LI GY G + ++ LM GN
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN-CET 319
V PN+ TFN L+ +CK+ K+ EA+ V +M+ V P+TVTYNT+ Y Q G
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 320 GMRLFEEM-GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALI 378
+ E+M + + KP+ T ++ G C++G+ + V+ + + + N F++LI
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 379 TGQC-------------------------VRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
G + N + Q+ M + T+ ++
Sbjct: 303 NGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVM 362
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
+ + + A QV ++M+ + PD+ S L G R + A EL
Sbjct: 363 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 412
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 47/312 (15%)
Query: 73 LQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDS----SPLV 128
++T ++L+ +K + A +++++ V + T C + ++ S +V
Sbjct: 188 IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVV 247
Query: 129 FDAVFKTYANLN---------------KLRDATHTFLRMKEY--------------GFLP 159
V K A N ++RD RMKE GF+
Sbjct: 248 EKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Query: 160 TLESC---NAFLSSLLQLRRAEVALAFYREMR-------RDC-ISPNVYTLNMVICAYCK 208
++ L+ LL EV L ++M+ ++C + +V T + V+ A+
Sbjct: 308 VMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSS 367
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-KSLMGNYRVSPNVV 267
+G + +A + ++M G+ P +++ L GY A ++ ++L+ R PNVV
Sbjct: 368 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR--PNVV 425
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
F T+I+G+C G + +A RVF++M V+PN T+ TL+ GY ++ + + M
Sbjct: 426 IFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 485
Query: 328 GRNQVKPDILTY 339
VKP+ T+
Sbjct: 486 RGCGVKPENSTF 497
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 163/361 (45%), Gaps = 40/361 (11%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD 211
+K++ F T+ + NA + S +L E L +R+M+ + I P +YT N ++ +
Sbjct: 178 IKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMF 237
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK-----------------MK 254
+ A E M+ + P +V++N +I GYC G A++ M
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 255 SLMGNY--------------------RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
+ Y +V P+ F+ +I G CKEGKL+E Y VF M
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPH--AFSLVIGGLCKEGKLNEGYTVFENMIR 355
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
PN Y LI+GY++ G+ E +RL M KPD++TY+ ++ GLCK+G+ ++
Sbjct: 356 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
A + D L N+ +S+LI G + A +++ M+ G + + + LI
Sbjct: 416 ALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDS-GILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
F K+ D A+ + + M + + + L +G+ + R AL+L M K +
Sbjct: 476 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGIT 535
Query: 474 P 474
P
Sbjct: 536 P 536
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 156/346 (45%), Gaps = 16/346 (4%)
Query: 134 KTYANLNKLRDATHTFLRMKEYGFLPTLESCNA---FLSSLLQLRRAEVALAFYREMRRD 190
+T + KLRD + ++ +++C A F S +A Y+EM
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS----------CVALYQEMDEK 321
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
I + ++VI CK G L E M G P V + LI GY G + A
Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 381
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
+++ M + P+VVT++ ++NG CK G++ EA F + +A N++ Y++LI+G
Sbjct: 382 IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDG 441
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
+ G + RLFEEM D YNALI K K +A L K ++++
Sbjct: 442 LGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQ 501
Query: 371 -ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
T++ L++G + +E A +++ M G +P + F L + C + A ++L
Sbjct: 502 TVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKIL 561
Query: 430 RDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM-EAKRLLP 474
++ + D+ + N L + GR + A +L + E R +P
Sbjct: 562 DELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERGREVP 606
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 199/474 (41%), Gaps = 56/474 (11%)
Query: 30 LHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKF 89
L LS + F +K ++ K D ++ FF W +H L+ + L+ LA
Sbjct: 111 LIKLSPNFVSFVLKSDEIREKPD--IAWSFFCWSRKQKKYTHNLECYVSLVDVLA----- 163
Query: 90 KTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTF 149
+ + + + SS F+ + + S+ +A+ K++ L + + +
Sbjct: 164 -----LAKDVDRIRFVSSEIKKFE-----FPMTVSAA---NALIKSFGKLGMVEELLWVW 210
Query: 150 LRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKS 209
+MKE G PTL + N ++ L+ + A + M I P++ T N +I YCK+
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 210 GDLPRALETL-----------------------------------EKMKDMGLSPTVVSF 234
G +A+E L ++M + G+ +F
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
+ +I G C +G L + M PNV + LI+G+ K G + +A R+ M
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
P+ VTY+ ++NG + G E + F + + + + Y++LI GL K G+ +
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM-TSIGYSPNESTFGMLI 413
A L +E+ + ++ ++ALI + A +++ M G T+ +L+
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
S K + A+++ M+D+ +TP + AL GL G+ A ++ E+
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDEL 564
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 154/348 (44%), Gaps = 18/348 (5%)
Query: 55 LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDA 114
L+ +FF W HT + +L+ A ++K ++ +I +++ T F+
Sbjct: 134 LAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACT-FNL 192
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
L+C+ C + L RD F++ K + + P S NA L SLL +
Sbjct: 193 LICT---CGEAGLA--------------RDVVEQFIKSKTFNYRPYKHSYNAILHSLLGV 235
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
++ ++ Y +M D +P+V T N+V+ A + G R L++M G SP + ++
Sbjct: 236 KQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTY 295
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
N L+ AL + + M V P V+ F TLI+G + GKL E
Sbjct: 296 NILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVK 355
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
P+ V Y +I GY G E +F+EM P++ TYN++I G C GK K+
Sbjct: 356 VGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKE 415
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
A L+KE++ PN +S L+ A ++ + M G+
Sbjct: 416 ACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%)
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
EM +D T N++IC ++G +E K K P S+NA++
Sbjct: 177 EMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVK 236
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
L + M +P+V+T+N ++ + GK YR+ EM +P+ TYN
Sbjct: 237 QYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYN 296
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
L++ + + L M V+P ++ + LI GL + GK + + E K
Sbjct: 297 ILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKV 356
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
P+ ++ +ITG E+A ++++ MT G PN T+ +I FC F A
Sbjct: 357 GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA 416
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
+L++M R P+ + S L N L G+ A E+ +M K
Sbjct: 417 CALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 85/210 (40%)
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
TFN LI + G + F + K N P +YN +++ + + ++E+M
Sbjct: 189 TFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQM 248
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
+ PD+LTYN ++ + GKT + L+ E+ KD P+ T++ L+ N
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
A + M +G P F LI + + + + + TPD + +
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVM 368
Query: 448 YNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
G G A E+ EM K LP F
Sbjct: 369 ITGYISGGELEKAEEMFKEMTEKGQLPNVF 398
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 119/221 (53%)
Query: 144 DATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVI 203
+A + F M E G P + + N + S R A R M I+P++ T + +I
Sbjct: 28 NAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALI 87
Query: 204 CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVS 263
A+ K + A E ++M + PT +++N++I G+C + + A +M M + S
Sbjct: 88 NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
P+VVTF+TLING+CK ++ +F EM + NTVTY TLI+G+ Q+G+ + L
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 207
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
EM V PD +T++ ++ GLC + +KA ++++L K
Sbjct: 208 LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 118/218 (54%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A + EM I PNV T N +I ++C SG A + L M + ++P +V+F+ALI+
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
+ + + A ++ M + + P +T+N++I+GFCK+ ++ +A R+ M +P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+ VT++TLINGY + + GM +F EM R + + +TY LI G C+ G A +L+
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
E+ + P+ TF ++ G C + +AF I +
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 125/241 (51%)
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
I +V ++ CK G+ A +M + G+ P V+++N +I +C+ G A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
++ M +++P++VTF+ LIN F KE K+ EA ++ EM ++ P T+TYN++I+G+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
+ + R+ + M PD++T++ LI G CK + + E+ + +V N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
T++ LI G C + + A + M S G +P+ TF +++ C ++ A +L D
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 432 M 432
+
Sbjct: 246 L 246
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 115/219 (52%)
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
MG + +VV +++ CK+G A +F+EM + PN +TYN +I+ + G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+L M Q+ PDI+T++ALI K+ K +A + KE+ + ++ P T+++
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
+I G C ++ + A ++ SM S G SP+ TF LI+ +CK + D +++ +M R
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ ++ + L +G + G A +L +EM + + P+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 219
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 2/233 (0%)
Query: 227 LSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
+ VV A++ C G A + + M + PNV+T+N +I+ FC G+ +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGL 346
++ M + P+ VT++ LIN + + +++EM R + P +TYN++I G
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 347 CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
CK + A ++ + P+ TFS LI G C + +I+ M G N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 407 STFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL 459
T+ LI FC+ D D A +L +M+ + PD + GL C +K L
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL--CSKKEL 236
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
L ++ + ++ + + DA M E P + + +A +++ ++ R+ A Y+E
Sbjct: 46 LTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKE 105
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M R I P T N +I +CK + A L+ M G SP VV+F+ LI+GYC
Sbjct: 106 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 165
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ +++ M + N VT+ TLI+GFC+ G L A + +EM VAP+ +T++
Sbjct: 166 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 225
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQ 331
++ G + E++ +++
Sbjct: 226 MLAGLCSKKELRKAFAILEDLQKSE 250
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 178/409 (43%), Gaps = 29/409 (7%)
Query: 46 LLKLKNDDVLSLEFFNWV---HNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINV 102
LLK +N+ + SL FF W+ ++ P +L +IL L + + K A S L
Sbjct: 86 LLKSQNNVLFSLWFFRWLCSNYDYTPGPVSL---NILFGALLDGKAVKAAKSFL------ 136
Query: 103 NVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLE 162
T F P + + K + + +A + +K+ G ++
Sbjct: 137 -----DTTGFKP----------EPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVV 181
Query: 163 SCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM 222
+CN+ L L+ R+ + ++EM + +I A C GD+ E L++
Sbjct: 182 TCNSVLLGCLKARKLDRFWELHKEMVESEFDSE--RIRCLIRALCDGGDVSEGYELLKQG 239
Query: 223 KDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKL 282
GL P + LISG+C G ++ M + P++ + +I G C K
Sbjct: 240 LKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQ 299
Query: 283 HEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL 342
EAY +F +K AP+ V Y T+I G+ + G + +L+ EM + ++P+ YN +
Sbjct: 300 LEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVM 359
Query: 343 ILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
I G K G+ E+ ++ + + +I G C S+ AF+I+++M+ G
Sbjct: 360 IHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGV 419
Query: 403 SPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
+PN T+ LI FCK + +++ +++ + P +AL L
Sbjct: 420 TPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 7/252 (2%)
Query: 228 SPTVVSFNALISGYCNKGLLGLALKM-KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
+P VS N L L G A+K KS + P + +EG + EA
Sbjct: 110 TPGPVSLNILFGAL----LDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAI 165
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGL 346
V++ +K ++ + VT N+++ G + + L +EM ++ + + LI L
Sbjct: 166 EVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRAL 223
Query: 347 CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
C G + L+K+ K L P ++ LI+G C N ++ +M + + P+
Sbjct: 224 CDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSM 283
Query: 407 STFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSE 466
+ +I C N+ A + +++ D+ PD + + + G G A +L E
Sbjct: 284 YIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFE 343
Query: 467 MEAKRLLPEGFG 478
M K + P F
Sbjct: 344 MIKKGMRPNEFA 355
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 141/297 (47%), Gaps = 1/297 (0%)
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
G P + + + SL + R + A +E+ P+ YT N ++ CK DL
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 216 LETLEKMKD-MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLIN 274
E +++M+D + P +VSF LI CN L A+ + S +GN P+ +NT++
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 275 GFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKP 334
GFC K EA V+ +MK V P+ +TYNTLI G S+ G E + M +P
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP 333
Query: 335 DILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIY 394
D TY +L+ G+C+ G++ A +L++E++ PN T++ L+ G C ++ ++Y
Sbjct: 334 DTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELY 393
Query: 395 RSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
M S G + + L+ K+ A +V +D D+ S L L
Sbjct: 394 EMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 173/372 (46%), Gaps = 24/372 (6%)
Query: 106 SSSNTLFDALLCSYRLCDSSPL---VFDAVFKTYANLNKLRDATHTF---------LRMK 153
S + +LF+++ + R+ PL ++V ++Y ++ + D F R
Sbjct: 66 SDAKSLFNSIAATSRI----PLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPG 121
Query: 154 EYGFLPTL-ESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDL 212
FL L +C A SS+ + R M + + P+ T ++ + + C++G +
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRV------LNLMVNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCN-KGLLGLALKMKSLMGNYRVSPNVVTFNT 271
A + ++++ + P ++N L+ C K L + + + ++ V P++V+F
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
LI+ C L EA + S++ A P+ YNT++ G+ + + ++++M
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 332 VKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAF 391
V+PD +TYN LI GL K G+ ++A +K + P+ +T+++L+ G C + S A
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGAL 355
Query: 392 QIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
+ M + G +PN+ T+ L+ CK D +++ M + +S + L L
Sbjct: 356 SLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSL 415
Query: 452 SRCGRKRLALEL 463
+ G+ A E+
Sbjct: 416 VKSGKVAEAYEV 427
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 3/279 (1%)
Query: 194 PNVYTLNMVICAYCKSGD--LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
P T +++ C++ D + L M + GL P V+ + + C G + A
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA-NVAPNTVTYNTLING 310
+ + P+ T+N L+ CK LH Y EM+ +V P+ V++ LI+
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
N M L ++G KPD YN ++ G C K +A + K++ ++ + P+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
T++ LI G E A ++M GY P+ +T+ L++ C+ + GA+ +L
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 431 DMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
+M R P+ + L +GL + +EL M++
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKS 398
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 9/244 (3%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
Y ++++RD ++ P L S + ++ + A+ ++ P+
Sbjct: 214 YEFVDEMRD---------DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
+ N ++ +C A+ +KMK+ G+ P +++N LI G G + A
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
M + P+ T+ +L+NG C++G+ A + EM+ APN TYNTL++G +
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKAR 384
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
+ GM L+E M + VK + Y L+ L K GK +A + + +AS +S
Sbjct: 385 LMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYS 444
Query: 376 ALIT 379
L T
Sbjct: 445 TLET 448
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
F + N LR+A + ++ GF P N + L + A+ Y++M+
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
+ + P+ T N +I K+G + A L+ M D G P ++ +L++G C KG
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
AL + M +PN T+NTL++G CK + + ++ MK + V + Y TL+
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL 342
+ G +F+ ++ D Y+ L
Sbjct: 413 RSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 120/286 (41%), Gaps = 20/286 (6%)
Query: 22 LIHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLH 81
L+ E P T F +KH L K K+ V+ EF + + + L + +IL+
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKH-LCKCKDLHVV-YEFVDEMRDDFDVKPDLVSFTILID 238
Query: 82 TLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNK 141
+ N++ + A ++ ++ N +++ + K + L+K
Sbjct: 239 NVCNSKNLREAMYLVSKLGNAGFKPDC------------------FLYNTIMKGFCTLSK 280
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNM 201
+A + +MKE G P + N + L + R E A + + M P+ T
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYR 261
++ C+ G+ AL LE+M+ G +P ++N L+ G C L+ +++ +M +
Sbjct: 341 LMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSG 400
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
V + TL+ K GK+ EAY VF + + Y+TL
Sbjct: 401 VKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 192/448 (42%), Gaps = 20/448 (4%)
Query: 41 RVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRII 100
R+ +L++ + + ++FF W H T+ L+ L R + + ++ ++
Sbjct: 94 RLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVV 153
Query: 101 NVNVASSSNTLFDALLCSY------------------RLCDSSPLVFDAVFKTYANLNKL 142
S S + L+ + R C + +++V +
Sbjct: 154 RNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQH 213
Query: 143 RDATHTFLRM-KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNM 201
+ M E P + +A +SS +L R + A+ + EM+ +C+ P
Sbjct: 214 EKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTT 273
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYR 261
++ Y K G + +AL+ E+MK G SPTV ++ LI G G + A M
Sbjct: 274 LLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG 333
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING-YSQIGNCETG 320
++P+VV N L+N K G++ E VFSEM + P V+YNT+I + +
Sbjct: 334 LTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEV 393
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
F++M + V P TY+ LI G CK + +KA L++E+D+ P + + +LI
Sbjct: 394 SSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA 453
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
E A ++++ + + + + ++I F K AV + +M ++ PD
Sbjct: 454 LGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Query: 441 SGILSALYNGLSRCGRKRLALELCSEME 468
+AL +G+ + G A L +ME
Sbjct: 514 VYAYNALMSGMVKAGMINEANSLLRKME 541
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 181/442 (40%), Gaps = 61/442 (13%)
Query: 66 CNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY------ 119
C P+S T + ++L + K H + + N + AL+ SY
Sbjct: 193 CKPTSSTYNSVILMLMQEGQHEK---VHEVYTEMCNEGDCFPDTITYSALISSYEKLGRN 249
Query: 120 ----RLCDS--------SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAF 167
RL D + ++ + Y + K+ A F MK G PT+ +
Sbjct: 250 DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTEL 309
Query: 168 LSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGL 227
+ L + R + A FY++M RD ++P+V LN ++ K G + +M
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 228 SPTVVSFNALISG-YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
+PTVVS+N +I + +K + M VSP+ T++ LI+G+CK ++ +A
Sbjct: 370 TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKAL 429
Query: 287 RVFSEMKVANVAPNTVTYNTLING-----------------------------------Y 311
+ EM P Y +LIN +
Sbjct: 430 LLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHF 489
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
+ G + LF EM PD+ YNAL+ G+ K G +A +L+++++++ +
Sbjct: 490 GKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADI 549
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
++ + ++ G RA +++ ++ G P+ T+ L+ F F+ A +++R+
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Query: 432 MLDRSMTPD----SGILSALYN 449
M D+ D S IL A+ N
Sbjct: 610 MKDKGFEYDAITYSSILDAVGN 631
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 42/231 (18%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
S + + Y N++ A M E GF P + + +++L + +R E A +
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 185 REMRRDC--ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
+E++ + +S VY + +I + K G L A++ +MK+ G P V ++NAL+SG
Sbjct: 468 KELKENFGNVSSRVYAV--MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMV 525
Query: 243 NKGLLG-----------------------------------LALKMKSLMGNYRVSPNVV 267
G++ A++M + + + P+ V
Sbjct: 526 KAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGV 585
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCE 318
T+NTL+ F G EA R+ EMK + +TY+++++ +GN +
Sbjct: 586 TYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA---VGNVD 633
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 160/353 (45%), Gaps = 12/353 (3%)
Query: 96 LRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHT--FLRMK 153
+ RI N +S LLCS + P + + K+ N +RDA F R
Sbjct: 50 ISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKS---CNSVRDALFVVDFCRTM 106
Query: 154 EYG------FLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYC 207
G + T + N LSSL + E Y EM D +SP++YT N ++ YC
Sbjct: 107 RKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYC 166
Query: 208 KSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVV 267
K G + A + + + G P ++ + I+G+C + + A K+ M N V
Sbjct: 167 KLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEV 226
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
++ LI G + K+ EA + +MK N PN TY LI+ G M LF++M
Sbjct: 227 SYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM 286
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
+ +KPD Y LI C +A+ L++ + ++ L+PN T++ALI G C + N
Sbjct: 287 SESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNV 345
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
+A + M P+ T+ LI+ C + + D A ++L M + + P+
Sbjct: 346 HKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 125/242 (51%), Gaps = 1/242 (0%)
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
+N L+S GL+ ++ + M VSP++ TFNTL+NG+CK G + EA + + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
A P+ TY + I G+ + + ++F+EM +N + ++Y LI GL + K
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 354 KAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
+A +L+ ++ DN PN T++ LI C A +++ M+ G P++ + +LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
FC + D A +L ML+ + P+ +AL G + + A+ L S+M + L+
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHK-AMGLLSKMLEQNLV 361
Query: 474 PE 475
P+
Sbjct: 362 PD 363
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 5/247 (2%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF--YRE 186
F+ + Y L + +A + + G P + +F++ RR EV AF ++E
Sbjct: 158 FNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITG--HCRRKEVDAAFKVFKE 215
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M ++ N + +I ++ + AL L KMKD P V ++ LI C G
Sbjct: 216 MTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQ 275
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
A+ + M + P+ + LI FC L EA + M + PN +TYN
Sbjct: 276 KSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNA 335
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI G+ + N M L +M + PD++TYN LI G C G A L+ +++
Sbjct: 336 LIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESG 394
Query: 367 LVPNAST 373
LVPN T
Sbjct: 395 LVPNQRT 401
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 194/439 (44%), Gaps = 62/439 (14%)
Query: 74 QTHSILLHTLANNRKFKTAHSILRRIINVN----VASSSNTL--------FDALLCSYRL 121
+T++ +LH L +N K A ++ + N S SN + D +C R+
Sbjct: 105 ETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRV 164
Query: 122 CDSSPLVFDAVFKTY----ANLNK---LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
S V D + TY NL K +R A M G P + + N + +
Sbjct: 165 MVMSGGVPDTI--TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVI---CAYCKSGDLPRALETLEKMKDMGLSPTV 231
AE A+ F+++ ++ P + T +++ C YC S RA+E LE M G P +
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA---RAIEVLEDMAVEGCYPDI 279
Query: 232 VSFNALISGYCNKG-----------LLGLALKMKSLMGN--------------------- 259
V++N+L++ C +G +L L++ ++ N
Sbjct: 280 VTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNI 339
Query: 260 -YRVS--PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
Y+ S P V+T+N LING CK L A F +M P+ VTYNT++ S+ G
Sbjct: 340 MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGM 399
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+ + L + P ++TYN++I GL K G KKA L ++ + P+ T +
Sbjct: 400 VDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRS 459
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
LI G C N E A Q+ + ++ G ST+ ++I CK ++ + A++V+ ML
Sbjct: 460 LIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG 519
Query: 437 MTPDSGILSALYNGLSRCG 455
PD I +A+ G+ G
Sbjct: 520 CKPDETIYTAIVKGVEEMG 538
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 147/335 (43%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
KL DA M + +P SC+ + L ++ + + A+ R M P+ T N
Sbjct: 119 KLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYN 178
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
M+I CK G + AL LE M G P V+++N +I + G A++
Sbjct: 179 MIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQN 238
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
P ++T+ L+ C+ A V +M V P+ VTYN+L+N + GN E
Sbjct: 239 GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEV 298
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+ + + + ++ + +TYN L+ LC + ++ + + + P T++ LI G
Sbjct: 299 ASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILING 358
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C RA + M P+ T+ ++ K D A+++L + + P
Sbjct: 359 LCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPG 418
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+++ +GL++ G + ALEL +M + P+
Sbjct: 419 LITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 131/278 (47%)
Query: 198 TLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM 257
T N ++ C +G L A + +E M P S + L+ G L A+ + +M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 258 GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNC 317
P+ +T+N +I CK+G + A + +M ++ P+ +TYNT+I GN
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 318 ETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSAL 377
E +R +++ +N P ++TY L+ +C+ + +A +++++ + P+ T+++L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 378 ITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSM 437
+ C R N E + + + S G N T+ L+ C +E +D ++L M S
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 438 TPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
P + L NGL + A++ +M ++ LP+
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 383
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD 211
M + + PT+ + N ++ L + R A+ F+ +M P++ T N V+ A K G
Sbjct: 340 MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGM 399
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
+ A+E L +K+ P ++++N++I G KGL+ AL++ M + + P+ +T +
Sbjct: 400 VDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRS 459
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
LI GFC+ + EA +V E TY +I G + E + + E M
Sbjct: 460 LIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG 519
Query: 332 VKPDILTYNALILGLCKDGKTKKAA 356
KPD Y A++ G+ + G +A
Sbjct: 520 CKPDETIYTAIVKGVEEMGMGSEAV 544
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 171/387 (44%), Gaps = 41/387 (10%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
V D + K+ +L++L + + K + + L ++ + L + + AL ++M
Sbjct: 90 VLDYILKS--SLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKM 147
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
+ P + T N ++ CK+G + +A + +M++MG SP VS+N LI G C+ +
Sbjct: 148 IYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNV 207
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFC------------------------------ 277
AL + + M Y + PN VT N +++ C
Sbjct: 208 DKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVI 267
Query: 278 ---------KEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMG 328
K G + +A V+ EM NV ++V YN +I G GN +M
Sbjct: 268 CTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMV 327
Query: 329 RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE 388
+ V PD+ TYN LI LCK+GK +A +L + + P+ ++ +I G C+ +
Sbjct: 328 KRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 389 RAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALY 448
RA + SM P + ++I + + D A+ VL ML + P+ +AL
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Query: 449 NGLSRCGRKRLALELCSEMEAKRLLPE 475
+G + GR A + +EM + ++ P+
Sbjct: 448 HGYVKGGRLIDAWWVKNEMRSTKIHPD 474
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 164/364 (45%), Gaps = 8/364 (2%)
Query: 113 DALLCSYRLCDSSP--LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSS 170
D L+ R SP + ++ + K ++N + A + F M +YG P +CN + +
Sbjct: 176 DGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHA 235
Query: 171 LLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYC-----KSGDLPRALETLEKMKDM 225
L Q E D N L++VIC K+G++ +ALE ++M
Sbjct: 236 LCQKGVIGNNNKKLLEEILDSSQANA-PLDIVICTILMDSCFKNGNVVQALEVWKEMSQK 294
Query: 226 GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
+ V +N +I G C+ G + A M V+P+V T+NTLI+ CKEGK EA
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
+ M+ VAP+ ++Y +I G G+ M ++ + P++L +N +I G
Sbjct: 355 CDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Query: 346 LCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
+ G T A +++ + + PN T +ALI G A+ + M S P+
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 474
Query: 406 ESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCS 465
+T+ +L+ C A Q+ +ML R PD + L GL GR + A L S
Sbjct: 475 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS 534
Query: 466 EMEA 469
++A
Sbjct: 535 RIQA 538
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 136/272 (50%)
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
+ +V++ + + + + A M + G P + + N +S+L + + + A
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
+ M+ ++P+ + ++I C GD+ RA E L M L P V+ +N +I GY
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
G AL + +LM +Y V PNV T N LI+G+ K G+L +A+ V +EM+ + P+T T
Sbjct: 418 YGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT 477
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
YN L+ +G+ +L++EM R +PDI+TY L+ GLC G+ KKA +L+ +
Sbjct: 478 YNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQ 537
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYR 395
+ + F L A+ +Y+
Sbjct: 538 ATGITIDHVPFLILAKKYTRLQRPGEAYLVYK 569
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 154/401 (38%), Gaps = 46/401 (11%)
Query: 121 LCDSSPLVFDAVFKTYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ 173
+C + +D ++++ KL A +M G +P L + N L+ L +
Sbjct: 109 VCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCK 168
Query: 174 LRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
E A REMR SPN + N +I C ++ +AL M G+ P V+
Sbjct: 169 AGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVT 228
Query: 234 FNALISGYCNKGLLG---------------------------------------LALKMK 254
N ++ C KG++G AL++
Sbjct: 229 CNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVW 288
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
M V + V +N +I G C G + AY +M V P+ TYNTLI+ +
Sbjct: 289 KEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKE 348
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G + L M V PD ++Y +I GLC G +A + + K +L+P +
Sbjct: 349 GKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW 408
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD 434
+ +I G ++ A + M S G PN T LI + K A V +M
Sbjct: 409 NVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 468
Query: 435 RSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ PD+ + L G RLA +L EM + P+
Sbjct: 469 TKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
L+++ V Y A M YG P + + NA + ++ R A E
Sbjct: 406 LLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNE 465
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
MR I P+ T N+++ A C G L A + ++M G P ++++ L+ G C KG
Sbjct: 466 MRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGR 525
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
L A + S + ++ + V F L + + + EAY V+ +
Sbjct: 526 LKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKK 570
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 151/307 (49%), Gaps = 9/307 (2%)
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
EM RD PN T N +I +Y ++ L A+ +M++ G P V++ LI + G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
L +A+ M M +SP+ T++ +IN K G L A+++F EM PN VTYN
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL--ILGLCKDGKTKKAANLVKELD 363
+++ +++ N + ++L+ +M +PD +TY+ + +LG C G ++A + E+
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQ 566
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
+ N +P+ + L+ N E+A+Q Y++M G PN T L+S F +
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRC--GRKRLALELCSEMEAKRLLPEGFGQEK 481
A ++L++ML + P + L LS C GR +L + C ++ A P K
Sbjct: 627 EAYELLQNMLALGLRPSLQTYTLL---LSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLK 683
Query: 482 IAITSPE 488
+ P+
Sbjct: 684 MPAAGPD 690
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 161/387 (41%), Gaps = 54/387 (13%)
Query: 28 ENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNR 87
E L L + ++ +L ++ ND +L FF W+ H T++ ++ L +
Sbjct: 320 EALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 88 KFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATH 147
+F + +L ++ C + + ++ + +Y N L +A +
Sbjct: 379 QFGAINKLLDEMVRDG------------------CQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 148 TFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYC 207
F +M+E G P+ T +I +
Sbjct: 421 VFNQMQEAG-----------------------------------CKPDRVTYCTLIDIHA 445
Query: 208 KSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVV 267
K+G L A++ ++M+ GLSP +++ +I+ G L A K+ M + +PN+V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+N +++ K A +++ +M+ A P+ VTY+ ++ G E +F EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
+ PD Y L+ K G +KA + + L PN T ++L++ N
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLIS 414
A+++ ++M ++G P+ T+ +L+S
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%)
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+ T++ + + ++ EM PNTVTYN LI+ Y + M +F +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
KPD +TY LI K G A ++ + + L P+ T+S +I +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
A +++ M G +PN T+ +++ + K ++ A+++ RDM + PD S +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 448 YNGLSRCGRKRLALELCSEMEAKRLLPE 475
L CG A + +EM+ K +P+
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%)
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ 392
K D TY ++ L + + L+ E+ +D PN T++ LI N A
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 393 IYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLS 452
++ M G P+ T+ LI + K D A+ + + M ++PD+ S + N L
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 453 RCGRKRLALELCSEMEAKRLLP 474
+ G A +L EM + P
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTP 502
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 151/307 (49%), Gaps = 9/307 (2%)
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
EM RD PN T N +I +Y ++ L A+ +M++ G P V++ LI + G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
L +A+ M M +SP+ T++ +IN K G L A+++F EM PN VTYN
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL--ILGLCKDGKTKKAANLVKELD 363
+++ +++ N + ++L+ +M +PD +TY+ + +LG C G ++A + E+
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQ 566
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
+ N +P+ + L+ N E+A+Q Y++M G PN T L+S F +
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRC--GRKRLALELCSEMEAKRLLPEGFGQEK 481
A ++L++ML + P + L LS C GR +L + C ++ A P K
Sbjct: 627 EAYELLQNMLALGLRPSLQTYTLL---LSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLK 683
Query: 482 IAITSPE 488
+ P+
Sbjct: 684 MPAAGPD 690
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 161/387 (41%), Gaps = 54/387 (13%)
Query: 28 ENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNR 87
E L L + ++ +L ++ ND +L FF W+ H T++ ++ L +
Sbjct: 320 EALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 88 KFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATH 147
+F + +L ++ C + + ++ + +Y N L +A +
Sbjct: 379 QFGAINKLLDEMVRDG------------------CQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 148 TFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYC 207
F +M+E G P+ T +I +
Sbjct: 421 VFNQMQEAG-----------------------------------CKPDRVTYCTLIDIHA 445
Query: 208 KSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVV 267
K+G L A++ ++M+ GLSP +++ +I+ G L A K+ M + +PN+V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+N +++ K A +++ +M+ A P+ VTY+ ++ G E +F EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
+ PD Y L+ K G +KA + + L PN T ++L++ N
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLIS 414
A+++ ++M ++G P+ T+ +L+S
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%)
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+ T++ + + ++ EM PNTVTYN LI+ Y + M +F +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
KPD +TY LI K G A ++ + + L P+ T+S +I +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
A +++ M G +PN T+ +++ + K ++ A+++ RDM + PD S +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 448 YNGLSRCGRKRLALELCSEMEAKRLLPE 475
L CG A + +EM+ K +P+
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%)
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ 392
K D TY ++ L + + L+ E+ +D PN T++ LI N A
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 393 IYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLS 452
++ M G P+ T+ LI + K D A+ + + M ++PD+ S + N L
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 453 RCGRKRLALELCSEMEAKRLLP 474
+ G A +L EM + P
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTP 502
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 151/307 (49%), Gaps = 9/307 (2%)
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
EM RD PN T N +I +Y ++ L A+ +M++ G P V++ LI + G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
L +A+ M M +SP+ T++ +IN K G L A+++F EM PN VTYN
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL--ILGLCKDGKTKKAANLVKELD 363
+++ +++ N + ++L+ +M +PD +TY+ + +LG C G ++A + E+
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQ 566
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
+ N +P+ + L+ N E+A+Q Y++M G PN T L+S F +
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRC--GRKRLALELCSEMEAKRLLPEGFGQEK 481
A ++L++ML + P + L LS C GR +L + C ++ A P K
Sbjct: 627 EAYELLQNMLALGLRPSLQTYTLL---LSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLK 683
Query: 482 IAITSPE 488
+ P+
Sbjct: 684 MPAAGPD 690
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 161/387 (41%), Gaps = 54/387 (13%)
Query: 28 ENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNR 87
E L L + ++ +L ++ ND +L FF W+ H T++ ++ L +
Sbjct: 320 EALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 88 KFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATH 147
+F + +L ++ C + + ++ + +Y N L +A +
Sbjct: 379 QFGAINKLLDEMVRDG------------------CQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 148 TFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYC 207
F +M+E G P+ T +I +
Sbjct: 421 VFNQMQEAG-----------------------------------CKPDRVTYCTLIDIHA 445
Query: 208 KSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVV 267
K+G L A++ ++M+ GLSP +++ +I+ G L A K+ M + +PN+V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+N +++ K A +++ +M+ A P+ VTY+ ++ G E +F EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
+ PD Y L+ K G +KA + + L PN T ++L++ N
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLIS 414
A+++ ++M ++G P+ T+ +L+S
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%)
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+ T++ + + ++ EM PNTVTYN LI+ Y + M +F +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
KPD +TY LI K G A ++ + + L P+ T+S +I +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
A +++ M G +PN T+ +++ + K ++ A+++ RDM + PD S +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 448 YNGLSRCGRKRLALELCSEMEAKRLLPE 475
L CG A + +EM+ K +P+
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%)
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ 392
K D TY ++ L + + L+ E+ +D PN T++ LI N A
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 393 IYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLS 452
++ M G P+ T+ LI + K D A+ + + M ++PD+ S + N L
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 453 RCGRKRLALELCSEMEAKRLLP 474
+ G A +L EM + P
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTP 502
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 162/350 (46%), Gaps = 22/350 (6%)
Query: 55 LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDA 114
L+ FF W HT+ ++ +L+ A ++K ++ ++ +++ T F+
Sbjct: 131 LAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTART-FNL 189
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
L+CS C + L AV + F++ K + + P S NA L+SLL +
Sbjct: 190 LICS---CGEAGLAKQAVVQ--------------FMKSKTFNYRPFKHSYNAILNSLLGV 232
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
++ ++ Y++M D SP+V T N+++ + G + R ++M G SP ++
Sbjct: 233 KQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTY 292
Query: 235 NAL--ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
N L I G NK L AL + M + P+V+ + TLI+G + G L EM
Sbjct: 293 NILLHILGKGNKPLA--ALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEM 350
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
A P+ V Y +I GY G + +F EM P++ TYN++I GLC G+
Sbjct: 351 VKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEF 410
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
++A L+KE++ PN +S L++ A ++ R M G+
Sbjct: 411 REACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%)
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
EM +D T N++IC+ ++G +A+ K K P S+NA+++
Sbjct: 174 EMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVK 233
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
L + M SP+V+T+N L+ + GK+ R+F EM +P++ TYN
Sbjct: 234 QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYN 293
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
L++ + + M + P +L Y LI GL + G + + E+ K
Sbjct: 294 ILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKA 353
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
P+ ++ +ITG V ++A +++R MT G PN T+ +I C +F A
Sbjct: 354 GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 413
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
+L++M R P+ + S L + L + G+ A ++ EM K
Sbjct: 414 CWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%)
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
TFN LI + G +A F + K N P +YN ++N + + ++++M
Sbjct: 186 TFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQM 245
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
+ PD+LTYN L+ + GK + L E+ +D P++ T++ L+ N
Sbjct: 246 LEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKP 305
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
A M +G P+ + LI + + + L +M+ PD + +
Sbjct: 306 LAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVM 365
Query: 448 YNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
G G A E+ EM K LP F
Sbjct: 366 ITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 224/531 (42%), Gaps = 65/531 (12%)
Query: 1 MRRNIRFSGTDLDFVNIAHSHLIHS--QWENLHPLSTSLTPFRVKHI-------LLKLKN 51
+R++ R+ + N+ L+ S Q +N L + L+ ++ + + LL +N
Sbjct: 74 LRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSREN 133
Query: 52 DDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNT- 110
D SL +WVH + ++ ++++L + ++F AH + + +A T
Sbjct: 134 DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 193
Query: 111 -----------LFDALLC-----------------------SYRLCDSSPLV-------- 128
+FD+ L S RLCD S +
Sbjct: 194 STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKR 253
Query: 129 ---------FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV 179
++++ Y R+A M E G LP S + LS ++ +
Sbjct: 254 SGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLE 313
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
AL+ + EM+ + ++ T N++I Y + + A ++ M + P VVS+N ++
Sbjct: 314 ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR 373
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
Y L G A+ + LM + NVVT+NT+I + K + +A + EM+ + P
Sbjct: 374 VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEP 433
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
N +TY+T+I+ + + G + LF+++ + V+ D + Y +I+ + G A L+
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
EL + +P + + L +E A ++R G + S FG +I+++ +N
Sbjct: 494 HELKLPDNIPRETAITILAKA----GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRN 549
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
+ + ++V M PDS +++ + N + A + EM+ +
Sbjct: 550 QRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE 600
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 169/368 (45%), Gaps = 40/368 (10%)
Query: 153 KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDL 212
+E + P++ + N L ++L+ ++ ++A + EMR+ ++P+ YT + +I ++ K G
Sbjct: 147 EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMF 206
Query: 213 PRALETLEKM-----------------------------------KDMGLSPTVVSFNAL 237
AL L+KM K G++P +V++N++
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSM 266
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
I+ Y L A + M V PN V+++TL++ + + K EA VF+EMK N
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
A + T N +I+ Y Q+ + RLF + + ++P++++YN ++ + +A +
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH 386
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
L + + + ++ N T++ +I E+A + + M S G PN T+ +IS++
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
K D A + + + + D + + R G A L E++ LP+
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNI 502
Query: 478 GQEKIAIT 485
+E AIT
Sbjct: 503 PRE-TAIT 509
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 175/399 (43%), Gaps = 21/399 (5%)
Query: 42 VKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIIN 101
+ +L + ++ + FF W +H +T++ ++ LA R+F+T S+L +
Sbjct: 164 IVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGT 223
Query: 102 VNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTL 161
+ + F K +A + + A F MK+Y F +
Sbjct: 224 KGLLTME-------------------TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGV 264
Query: 162 ESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEK 221
E+ N L SL + + + A + ++ ++ +PN+ T +++ +C+ +L A
Sbjct: 265 ETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWND 323
Query: 222 MKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGK 281
M D GL P +V+ N ++ G A+K+ +M + PNV ++ +I FCK+
Sbjct: 324 MIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNA 341
+ A F +M + + P+ Y LI G+ +T L +EM PD TYNA
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 342 LILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIG 401
LI + + A + ++ ++ + P+ TF+ ++ + N E ++ M G
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 402 YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSM-TP 439
P+++++ +LI A + L +MLD+ M TP
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 542
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 146/348 (41%), Gaps = 39/348 (11%)
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREM-RRDCISPNVYTLNMVICAYCKSGDLPR 214
GF + N+ +S L + R+ E ++ EM + ++ +T+ M A+ + + +
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMK--AFAAAKERKK 247
Query: 215 ALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLIN 274
A+ E MK V + N L+ + LG ++ R +PN++T+ L+N
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDS-LGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 306
Query: 275 GFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING------------------------ 310
G+C+ L EA R++++M + P+ V +N ++ G
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 311 -----------YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+ + + ET + F++M + ++PD Y LI G K L+
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
KE+ + P+ T++ALI + E A +IY M P+ TF M++ +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
+++ V +M+ + + PD + L GL G+ R A EM
Sbjct: 487 RNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 534
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 122/288 (42%), Gaps = 37/288 (12%)
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
R + + T N ++ K+ + LE+M GL T+ +F + +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
A+ + LM Y+ V T N L++ + EA +F ++K PN +TY L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLL 305
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
NG+ ++ N R++ +M +KPDI+ +N ++ GL + ++K ++ +K
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLR---SRKKSDAIK-------- 354
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
++ M S G PN ++ ++I FCK + A++
Sbjct: 355 ------------------------LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEY 390
Query: 429 LRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEG 476
DM+D + PD+ + + L G + EL EM+ K P+G
Sbjct: 391 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 130/346 (37%), Gaps = 43/346 (12%)
Query: 45 ILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFK----TAHSILRRII 100
+L ++ +L++E F ++ + ++ + L KFK T + +L +
Sbjct: 217 VLEEMGTKGLLTMETFTIAMKAFAAAKE-RKKAVGIFELMKKYKFKIGVETINCLLDSLG 275
Query: 101 NVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPT 160
+ + LFD L + + + + + + + L +A + M + G P
Sbjct: 276 RAKLGKEAQVLFDKLKERF---TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPD 332
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ + N L LL+ R+ A+ + M+ PNV + ++I +CK + A+E +
Sbjct: 333 IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 392
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-------------------KSLMGNYR 261
M D GL P + LI+G+ + L ++ LM N +
Sbjct: 393 DMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 452
Query: 262 ----------------VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
+ P++ TFN ++ + V+ EM + P+ +Y
Sbjct: 453 MPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYT 512
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
LI G G R EEM +K ++ YN + G+
Sbjct: 513 VLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 146/290 (50%), Gaps = 4/290 (1%)
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK-MKSLMGNY 260
++ Y SG A + ++M ++ TV SFNAL+S Y N L A+K K L
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
++P++VT+NT+I C++G + + +F E++ P+ +++NTL+ + + G
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
R+++ M + P+I +YN+ + GL ++ K A NL+ + + + P+ T++ALIT
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
V NN E + Y M G +P+ T+ MLI + CK D D AV+V + + +
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSR 367
Query: 441 SGILSALYNGLSRCGRKRLALELCSEMEAK---RLLPEGFGQEKIAITSP 487
+ + L G+ A +L + + R LP+ +K +SP
Sbjct: 368 PNMYKPVVERLMGAGKIDEATQLVKNGKLQSYFRYLPDLSAGKKKTTSSP 417
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 118/235 (50%), Gaps = 1/235 (0%)
Query: 145 ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC-ISPNVYTLNMVI 203
A F M E T++S NA LS+ + ++ + A+ ++E+ I+P++ T N +I
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 204 CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVS 263
A C+ G + L E+++ G P ++SFN L+ + + L ++ LM + +S
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
PN+ ++N+ + G + K +A + MK ++P+ TYN LI Y N E M+
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALI 378
+ EM + PD +TY LI LCK G +A + +E K L+ + + ++
Sbjct: 321 YNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD 211
MK P + S N+ + L + ++ AL M+ + ISP+V+T N +I AY +
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
L ++ +MK+ GL+P V++ LI C KG L A+++ +++ +
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKP 373
Query: 272 LINGFCKEGKLHEAYRVFSEMKV 294
++ GK+ EA ++ K+
Sbjct: 374 VVERLMGAGKIDEATQLVKNGKL 396
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 150/333 (45%), Gaps = 18/333 (5%)
Query: 76 HSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKT 135
+ +L+ L+NN K LR+I S+T A+ C + D
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHD------------ 370
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
L + F G P + +LL +R + ++M D + +
Sbjct: 371 ------LVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSS 424
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
VY+ N VI CK+ + A L +M+D G+SP +V+FN +SGY +G + +
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLE 484
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
+ + P+V+TF+ +IN C+ ++ +A+ F EM + PN +TYN LI G
Sbjct: 485 KLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTG 544
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
+ + ++LF +M N + PD+ YNA I CK K KKA L+K + + L P+ T+S
Sbjct: 545 DTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYS 604
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNEST 408
LI A +++ S+ G P+ T
Sbjct: 605 TLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 139/295 (47%)
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
F R++ P+ T N + K DL + G+ P + L+
Sbjct: 342 FLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALL 401
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
N + MG + +V ++N +I+ CK ++ A +EM+ ++PN V
Sbjct: 402 NAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLV 461
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
T+NT ++GYS G+ + + E++ + KPD++T++ +I LC+ + K A + KE+
Sbjct: 462 TFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEM 521
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
+ + PN T++ LI C +++R+ +++ M G SP+ + I FCK
Sbjct: 522 LEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKV 581
Query: 423 DGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
A ++L+ ML + PD+ S L LS GR+ A E+ S +E +P+ +
Sbjct: 582 KKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSY 636
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/505 (20%), Positives = 205/505 (40%), Gaps = 89/505 (17%)
Query: 43 KHILLKLKNDD--VLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRII 100
+ ++ L+N D + SL F+ WV N +P Q+ L ++ N F+ +L +
Sbjct: 77 RFVISVLQNQDNPLHSLRFYLWVSNFDPVYAKDQS----LKSVLGNALFRKGPLLLSMEL 132
Query: 101 NVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPT 160
+ S + D L+C + ++ L + F ++ G P+
Sbjct: 133 LKEIRDSGYRISDELMC-------------VLIGSWGRLGLAKYCNDVFAQISFLGMKPS 179
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
NA + +L++ ++A +++MR D P+ +T N++I CK G + A+ ++
Sbjct: 180 TRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVK 239
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF---- 276
+M+ G P V ++ LI G+ G + ALK +M +++PN T T ++G
Sbjct: 240 QMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCL 299
Query: 277 --CKEGKL-----------------------------HEAYRVFSEMKVANVAPNTVTYN 305
CK ++ E + ++ P++ T+N
Sbjct: 300 PPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFN 359
Query: 306 T----LINGYSQIGNCET-------------------------------GMRLFEEMGRN 330
L+ G+ + C G R ++MG +
Sbjct: 360 AAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVD 419
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
+ + +YNA+I LCK + + AA + E+ + PN TF+ ++G VR + ++
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
+ + G+ P+ TF ++I+ C+ ++ A ++ML+ + P+ + L
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRS 539
Query: 451 LSRCGRKRLALELCSEMEAKRLLPE 475
G +++L ++M+ L P+
Sbjct: 540 CCSTGDTDRSVKLFAKMKENGLSPD 564
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 9/288 (3%)
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
EM RD PN T N +I +Y ++ L A+ +M++ G P V++ LI + G
Sbjct: 384 EMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAG 443
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
L +A+ M M +SP+ T++ +IN K G L A+R+F EM PN VT+N
Sbjct: 444 FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL--ILGLCKDGKTKKAANLVKELD 363
+I +++ N ET ++L+ +M +PD +TY+ + +LG C G ++A + E+
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQ 561
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
+ N VP+ + L+ N ++A+Q Y++M G PN T L+S F +
Sbjct: 562 RKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMS 621
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRC--GRKRLALELCSEMEA 469
A +L+ ML + P + L LS C R + C ++ A
Sbjct: 622 EAYNLLQSMLALGLHPSLQTYTLL---LSCCTDARSNFDMGFCGQLMA 666
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 161/391 (41%), Gaps = 54/391 (13%)
Query: 24 HSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTL 83
H+ E LH + ++ +L ++ N +L FF W+ H T++ ++ L
Sbjct: 311 HAAEEALHNFGFRMDAYQANQVLKQMDNY-ANALGFFYWLKRQPGFKHDGHTYTTMVGNL 369
Query: 84 ANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLR 143
++F + +L ++ C + + ++ + +Y N L+
Sbjct: 370 GRAKQFGEINKLLDEMVRDG------------------CKPNTVTYNRLIHSYGRANYLK 411
Query: 144 DATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVI 203
+A + F +M+E G P+ T +I
Sbjct: 412 EAMNVFNQMQEAG-----------------------------------CEPDRVTYCTLI 436
Query: 204 CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVS 263
+ K+G L A++ ++M++ GLSP +++ +I+ G L A ++ M +
Sbjct: 437 DIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCT 496
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
PN+VTFN +I K A +++ +M+ A P+ VTY+ ++ G E +
Sbjct: 497 PNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGV 556
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
F EM R PD Y L+ K G KA + + + L PN T ++L++
Sbjct: 557 FAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLR 616
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
+ A+ + +SM ++G P+ T+ +L+S
Sbjct: 617 VHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%)
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+ T++ + + E ++ EM PNTVTYN LI+ Y + + M +F +M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
+PD +TY LI K G A ++ + + + L P+ T+S +I +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
A +++ M G +PN TF ++I++ K +++ A+++ RDM + PD S +
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 448 YNGLSRCGRKRLALELCSEMEAKRLLPE 475
L CG A + +EM+ K +P+
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPD 568
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 1/163 (0%)
Query: 313 QIGNCETGMRLFEEMGRNQ-VKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
Q+ N + F + R K D TY ++ L + + + L+ E+ +D PN
Sbjct: 335 QMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNT 394
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
T++ LI N + A ++ M G P+ T+ LI + K D A+ + +
Sbjct: 395 VTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQR 454
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
M + ++PD+ S + N L + G A L EM + P
Sbjct: 455 MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTP 497
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 174/399 (43%), Gaps = 21/399 (5%)
Query: 42 VKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIIN 101
+ +L + ++ + FF W +H +T++ ++ LA R+F+T S+L +
Sbjct: 164 IVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGT 223
Query: 102 VNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTL 161
+ + F K +A + + A F MK+Y F +
Sbjct: 224 KGLLTMET-------------------FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGV 264
Query: 162 ESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEK 221
E+ N L SL + + + A + +++ + +PN+ T +++ +C+ +L A
Sbjct: 265 ETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWND 323
Query: 222 MKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGK 281
M D GL P +V+ N ++ G A+K+ +M + PNV ++ +I FCK+
Sbjct: 324 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNA 341
+ A F +M + + P+ Y LI G+ +T L +EM PD TYNA
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 342 LILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIG 401
LI + + + ++ ++ + P+ TF+ ++ V N E ++ M G
Sbjct: 444 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 503
Query: 402 YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSM-TP 439
P+++++ +LI A + L +MLD+ M TP
Sbjct: 504 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 37/279 (13%)
Query: 198 TLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM 257
T N ++ K+ + LE+M GL T+ +F + + A+ + LM
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 258 GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNC 317
Y+ V T N L++ + EA +F ++K PN +TY L+NG+ ++ N
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNL 314
Query: 318 ETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSAL 377
R++ +M + +KPDI+ +N ++ GL + K A L
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL------------------- 355
Query: 378 ITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSM 437
+ M S G PN ++ ++I FCK + A++ DM+D +
Sbjct: 356 ----------------FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 399
Query: 438 TPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEG 476
PD+ + + L G + EL EM+ K P+G
Sbjct: 400 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 130/346 (37%), Gaps = 43/346 (12%)
Query: 45 ILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFK----TAHSILRRII 100
+L ++ +L++E F ++ + ++ + L KFK T + +L +
Sbjct: 217 VLEEMGTKGLLTMETFTIAMKAFAAAKE-RKKAVGIFELMKKYKFKIGVETINCLLDSLG 275
Query: 101 NVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPT 160
+ + LFD L + + + + + + + L +A + M ++G P
Sbjct: 276 RAKLGKEAQVLFDKLKERF---TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPD 332
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ + N L LL+ + A+ + M+ PNV + ++I +CK + A+E +
Sbjct: 333 IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 392
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-------------------KSLMGNYR 261
M D GL P + LI+G+ + L ++ LM N +
Sbjct: 393 DMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 452
Query: 262 ----------------VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
+ P++ TFN ++ + V+ EM + P+ +Y
Sbjct: 453 MPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYT 512
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
LI G G R EEM +K ++ YN + G+
Sbjct: 513 VLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 174/399 (43%), Gaps = 21/399 (5%)
Query: 42 VKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIIN 101
+ +L + ++ + FF W +H +T++ ++ LA R+F+T S+L +
Sbjct: 163 IVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGT 222
Query: 102 VNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTL 161
+ + F K +A + + A F MK+Y F +
Sbjct: 223 KGLLTME-------------------TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGV 263
Query: 162 ESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEK 221
E+ N L SL + + + A + +++ + +PN+ T +++ +C+ +L A
Sbjct: 264 ETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWND 322
Query: 222 MKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGK 281
M D GL P +V+ N ++ G A+K+ +M + PNV ++ +I FCK+
Sbjct: 323 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 382
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNA 341
+ A F +M + + P+ Y LI G+ +T L +EM PD TYNA
Sbjct: 383 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Query: 342 LILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIG 401
LI + + + ++ ++ + P+ TF+ ++ V N E ++ M G
Sbjct: 443 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 502
Query: 402 YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSM-TP 439
P+++++ +LI A + L +MLD+ M TP
Sbjct: 503 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 37/288 (12%)
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
R + + T N ++ K+ + LE+M GL T+ +F + +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 245
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
A+ + LM Y+ V T N L++ + EA +F ++K PN +TY L+
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLL 304
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
NG+ ++ N R++ +M + +KPDI+ +N ++ GL + K A L
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL---------- 354
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
+ M S G PN ++ ++I FCK + A++
Sbjct: 355 -------------------------FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEY 389
Query: 429 LRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEG 476
DM+D + PD+ + + L G + EL EM+ K P+G
Sbjct: 390 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 437
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 130/346 (37%), Gaps = 43/346 (12%)
Query: 45 ILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFK----TAHSILRRII 100
+L ++ +L++E F ++ + ++ + L KFK T + +L +
Sbjct: 216 VLEEMGTKGLLTMETFTIAMKAFAAAKE-RKKAVGIFELMKKYKFKIGVETINCLLDSLG 274
Query: 101 NVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPT 160
+ + LFD L + + + + + + + L +A + M ++G P
Sbjct: 275 RAKLGKEAQVLFDKLKERF---TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPD 331
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ + N L LL+ + A+ + M+ PNV + ++I +CK + A+E +
Sbjct: 332 IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 391
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-------------------KSLMGNYR 261
M D GL P + LI+G+ + L ++ LM N +
Sbjct: 392 DMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 451
Query: 262 ----------------VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
+ P++ TFN ++ + V+ EM + P+ +Y
Sbjct: 452 MPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYT 511
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
LI G G R EEM +K ++ YN + G+
Sbjct: 512 VLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 208 KSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVV 267
K G+L + E L + + G P ++N LI G G ALK+ M +V P V
Sbjct: 130 KCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEM-KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
TF TLI+G CK+ ++ EA ++ +M KV V P Y +LI QIG +L +E
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE 248
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
++K D Y+ LI L K G++ + + +++E+ + P+ T++ LI G CV N+
Sbjct: 249 AYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEND 308
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
SE A ++ M G P+ ++ M++ VF + + ++ A + DM R +PD+
Sbjct: 309 SESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRI 368
Query: 447 LYNGLSRCGRKRLALELCSEMEAKRLLP-----EGFGQE 480
+++GL + A + EM K P EGF Q+
Sbjct: 369 VFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQK 407
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 118/308 (38%), Gaps = 21/308 (6%)
Query: 52 DDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTL 111
DD L L P+ T T L+H L + + K A + ++ V + +
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGT---LIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHI 225
Query: 112 FDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL 171
+ +L+ + LC L F K A K++ + + +SSL
Sbjct: 226 YASLIKA--LCQIGELSFAFKLKDEAYEGKIKVDAAIY---------------STLISSL 268
Query: 172 LQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
++ R+ EM P+ T N++I +C D A L++M + GL P V
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 232 VSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
+S+N ++ + A + M SP+ +++ + +G C+ + EA + E
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
M P + + G E ++ + R + D ++ +I +CK+
Sbjct: 389 MLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRG-IAGDADVWSVMIPTMCKEPV 447
Query: 352 TKKAANLV 359
+ +L+
Sbjct: 448 ISDSIDLL 455
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 193/486 (39%), Gaps = 58/486 (11%)
Query: 30 LHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKF 89
L+ L P + +L + + L FF W H+ + ++ L+ R+F
Sbjct: 88 LNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQF 147
Query: 90 KTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTF 149
++ + N LF L+ + +A+ N ++ A
Sbjct: 148 GAVWGLIEEMRKTNPELIEPELFVVLM-----------------RRFASANMVKKAVEVL 190
Query: 150 LRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKS 209
M +YG P L +L + + A + +MR PN+ ++ +C+
Sbjct: 191 DEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCRE 249
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNV--- 266
G L A E L +MK+ GL P +V F L+SGY + G + A + + M PNV
Sbjct: 250 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCY 309
Query: 267 ---------------------------------VTFNTLINGFCKEGKLHEAYRVFSEMK 293
VT+ LI+GFCK G + + Y V +M+
Sbjct: 310 TVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
V P+ VTY ++ + + E + L E+M R PD+L YN +I CK G+ K
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 354 KAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY--SPNESTFGM 411
+A L E++ + L P TF +I G + A ++ M S G +P T
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKS 489
Query: 412 LISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI--LSALYNGLSRCGRKRLALELCSEMEA 469
L++ +++ + A V + +++ + + + + + L G + A C +M
Sbjct: 490 LLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMME 549
Query: 470 KRLLPE 475
L+P+
Sbjct: 550 MDLMPQ 555
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 167/377 (44%), Gaps = 38/377 (10%)
Query: 100 INVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLP 159
I ++ S L++A L S + +PL ++A+ A N + A + +M++ G+
Sbjct: 172 ILIHALGRSEKLYEAFLLSQKQT-LTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQS 230
Query: 160 TLESCNAFLSSLLQLRRAE--VALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALE 217
+ + + SL + + + + L Y+E+ RD + +V +N +I + KSGD +AL+
Sbjct: 231 DFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQ 290
Query: 218 TLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFC 277
L + GL S T ++I+
Sbjct: 291 LLGMAQATGL-----------------------------------SAKTATLVSIISALA 315
Query: 278 KEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDIL 337
G+ EA +F E++ + + P T YN L+ GY + G + + EM + V PD
Sbjct: 316 DSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEH 375
Query: 338 TYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
TY+ LI G+ + A ++KE++ ++ PN+ FS L+ G R ++ FQ+ + M
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
SIG P+ + ++I F K D A+ ML + PD + L + + GR
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 495
Query: 458 RLALELCSEMEAKRLLP 474
+A E+ ME + LP
Sbjct: 496 IVAEEMFEAMERRGCLP 512
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 160/356 (44%), Gaps = 3/356 (0%)
Query: 104 VASSSNTL-FDALLCSYRLCDSSPL--VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPT 160
+A S TL +AL R P ++A+ K Y L+DA M++ G P
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ + + + + R E A +EM + PN + + ++ + G+ + + L+
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
+MK +G+ P +N +I + L A+ M + + P+ VT+NTLI+ CK G
Sbjct: 434 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
+ A +F M+ P TYN +IN Y + RL +M + P+++T+
Sbjct: 494 RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 553
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
L+ K G+ A ++E+ L P+++ ++ALI R SE+A +R MTS
Sbjct: 554 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 613
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
G P+ LI+ F ++ A VL+ M + + PD + L L R +
Sbjct: 614 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 156/354 (44%), Gaps = 27/354 (7%)
Query: 66 CNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSS 125
+P HT +S+L+ N ++++A +L+ + +V +S
Sbjct: 370 VSPDEHT---YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNS----------------- 409
Query: 126 PLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYR 185
VF + + + + + MK G P + N + + + + A+ +
Sbjct: 410 -FVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFD 468
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
M + I P+ T N +I +CK G A E E M+ G P ++N +I+ Y ++
Sbjct: 469 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 246 LLGLALKMKSLMGNYR---VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
MK L+G + + PNVVT TL++ + K G+ ++A EMK + P++
Sbjct: 529 RWD---DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSST 585
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
YN LIN Y+Q G E + F M + +KP +L N+LI +D + +A +++ +
Sbjct: 586 MYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
++ + P+ T++ L+ + ++ +Y M G P+ ML S
Sbjct: 646 KENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 152/347 (43%), Gaps = 4/347 (1%)
Query: 131 AVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD 190
++ A+ + +A F +++ G P + NA L ++ + A + EM +
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
+SP+ +T +++I AY +G A L++M+ + P F+ L++G+ ++G
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
++ M + V P+ +N +I+ F K L A F M + P+ VT+NTLI+
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
+ + G +FE M R P TYN +I + L+ ++ ++PN
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 371 ASTFSALIT--GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
T + L+ G+ R N A + M S+G P+ + + LI+ + + + AV
Sbjct: 549 VVTHTTLVDVYGKSGRFND--AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 606
Query: 429 LRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
R M + P L++L N R A + M+ + P+
Sbjct: 607 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 653
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 39/290 (13%)
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC--NKG 245
++ ++P Y N +I A ++ D+ +AL + KM+ G V+++ +I NK
Sbjct: 191 QKQTLTPLTY--NALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKI 248
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
+ L++ + ++ +V N +I GF K G +A ++ + ++ T T
Sbjct: 249 DSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLV 308
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
++I+ + G LFEE+ ++ +KP YNAL+ G K G K A ++V E++K
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
G SP+E T+ +LI + ++ A
Sbjct: 369 -----------------------------------GVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
VL++M + P+S + S L G G + ++ EM++ + P+
Sbjct: 394 RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 443
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
Query: 267 VTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGM--RLF 324
+T+N LI + + +A + ++M+ + V Y+ +I ++ ++ M RL+
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
+E+ R++++ D+ N +I+G K G KA L+ L +T ++I+
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGIL 444
+ A ++ + G P + L+ + K A ++ +M R ++PD
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 445 SALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
S L + GR A + EMEA + P F
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSF 410
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 163/364 (44%), Gaps = 9/364 (2%)
Query: 120 RLCDSSPL--------VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL 171
+L D PL + + Y+ K A F RMKE G PTL + N L
Sbjct: 196 KLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVF 255
Query: 172 LQLRRA-EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT 230
++ R+ L EMR + + +T + V+ A + G L A E ++K G P
Sbjct: 256 GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPG 315
Query: 231 VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS 290
V++NAL+ + G+ AL + M + VT+N L+ + + G EA V
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
M V PN +TY T+I+ Y + G + ++LF M P+ TYNA++ L K
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS 435
Query: 351 KTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFG 410
++ + ++ ++ + PN +T++ ++ + + +++R M S G+ P+ TF
Sbjct: 436 RSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFN 495
Query: 411 MLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
LIS + + A ++ +M +AL N L+R G R + S+M++K
Sbjct: 496 TLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK 555
Query: 471 RLLP 474
P
Sbjct: 556 GFKP 559
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 196/496 (39%), Gaps = 100/496 (20%)
Query: 56 SLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINV-NVASSSNTLFDA 114
+++ F + PS TL T++++L F R+I+ V + S FD
Sbjct: 229 AIDLFERMKEMGPSP-TLVTYNVILDV------FGKMGRSWRKILGVLDEMRSKGLKFDE 281
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLS----- 169
CS V A LR+A F +K G+ P + NA L
Sbjct: 282 FTCS------------TVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
Query: 170 -------SLL----------------QLRRAEVALAFYRE-------MRRDCISPNVYTL 199
S+L +L A V F +E M + + PN T
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY 389
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
VI AY K+G AL+ MK+ G P ++NA++S K +KM M +
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKS 449
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
SPN T+NT++ +G RVF EMK P+ T+NTLI+ Y + G+
Sbjct: 450 NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVD 509
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
+++ EM R + TYNAL+ L + G + N++ ++ P +++S ++
Sbjct: 510 ASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML- 568
Query: 380 GQC------------VRN----------------------------NSERAFQIYRSMTS 399
QC + N SERAF +++
Sbjct: 569 -QCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH-- 625
Query: 400 IGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL 459
GY P+ F ++S+F +N +D A +L + + ++PD ++L + R G
Sbjct: 626 -GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK 684
Query: 460 ALELCSEMEAKRLLPE 475
A E+ +E +L P+
Sbjct: 685 AEEILKTLEKSQLKPD 700
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 137/318 (43%), Gaps = 35/318 (11%)
Query: 147 HTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAY 206
F MK GF P ++ N +S+ + A Y EM R + V T N ++ A
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 207 CKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG--------------------- 245
+ GD + MK G PT S++ ++ Y G
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
Query: 246 -----LLGLALKMKSLMGNYRV---------SPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
LL K ++L G+ R P++V FN++++ F + +A +
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
++ ++P+ VTYN+L++ Y + G C + + + ++Q+KPD+++YN +I G C+ G
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL 716
Query: 352 TKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGM 411
++A ++ E+ + + P T++ ++G + M PNE TF M
Sbjct: 717 MQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKM 776
Query: 412 LISVFCKNEDFDGAVQVL 429
++ +C+ + A+ +
Sbjct: 777 VVDGYCRAGKYSEAMDFV 794
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 157/352 (44%), Gaps = 57/352 (16%)
Query: 64 HNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLC- 122
+ C+P+ T T +L N K + + R + + +T F+ L+ +Y C
Sbjct: 450 NGCSPNRATWNT---MLALCGNKGMDKFVNRVFREMKSCGFEPDRDT-FNTLISAYGRCG 505
Query: 123 ---DSSPLV-------FDAVFKTY-ANLNKL------RDATHTFLRMKEYGFLPTLES-- 163
D+S + F+A TY A LN L R + MK GF PT S
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 164 ----CNAFLSSLLQLRRAE-------------------------VALA----FYREMRRD 190
C A + L + R E ALA + ++
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
P++ N ++ + ++ +A LE +++ GLSP +V++N+L+ Y +G A
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
++ + ++ P++V++NT+I GFC+ G + EA R+ SEM + P TYNT ++G
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
Y+ +G + E M +N +P+ LT+ ++ G C+ GK +A + V ++
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV--ALAFY 184
++F+++ + N A ++E G P L + N+ + + +RR E A
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD--MYVRRGECWKAEEIL 689
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
+ + + + P++ + N VI +C+ G + A+ L +M + G+ P + ++N +SGY
Sbjct: 690 KTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAM 749
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
G+ + M PN +TF +++G+C+ GK EA S++K
Sbjct: 750 GMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%)
Query: 145 ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVIC 204
A RMK+ G P + + ++ ++ L + R A EM I+PNV T + +I
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 205 AYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSP 264
AY K G L + + M M + P V ++++LI G C + A+KM LM + +P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 265 NVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF 324
NVVT++TL NGF K ++ + ++ +M VA NTV+ NTLI GY Q G + + +F
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
M N + P+I +YN ++ GL +G+ +KA + + + K + T++ +I G C
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 306
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
+ A+ ++ + P+ + ++I+
Sbjct: 307 CMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 336
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 150/318 (47%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTL 199
N ++DA + +M++ G + + +L + R AL + M+ ISPNV T
Sbjct: 27 NSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTY 86
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
+ +I CKSG L A L +M ++P V++F+ALI Y +G L + +M
Sbjct: 87 SSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQ 146
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
+ PNV T+++LI G C ++ EA ++ M PN VTY+TL NG+ + +
Sbjct: 147 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
G++L ++M + V + ++ N LI G + GK A + + + L+PN +++ ++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
G E+A + M + T+ ++I CK A + + + + P
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEP 326
Query: 440 DSGILSALYNGLSRCGRK 457
D + + L+R G +
Sbjct: 327 DFKAYTIMIAELNRAGMR 344
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 131/254 (51%)
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
KM +G+ P +V+ ++L++G+C + A+ + M + +VV LI+ CK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
+ A V MK ++PN VTY++LI G + G R EM ++ P+++T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
ALI K GK K ++ K + + ++ PN T+S+LI G C+ N + A ++ M S
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 401 GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
G +PN T+ L + F K+ D +++L DM R + ++ + L G + G+ LA
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 461 LELCSEMEAKRLLP 474
L + M + L+P
Sbjct: 243 LGVFGYMTSNGLIP 256
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 161/327 (49%)
Query: 149 FLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK 208
L+M + G P + + ++ ++ + A+ +M + I +V ++I CK
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVT 268
+ + ALE L++MKD G+SP VV++++LI+G C G L A + M + +++PNV+T
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 269 FNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMG 328
F+ LI+ + K GKL + V+ M ++ PN TY++LI G + +++ + M
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 329 RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE 388
P+++TY+ L G K + L+ ++ + + N + + LI G +
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 389 RAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALY 448
A ++ MTS G PN ++ ++++ N + + A+ M D + +
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Query: 449 NGLSRCGRKRLALELCSEMEAKRLLPE 475
+G+ + + A +L +++ KR+ P+
Sbjct: 301 HGMCKACMVKEAYDLFYKLKFKRVEPD 327
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 19/300 (6%)
Query: 77 SILLHTLANNRKFKTAHSILRRI----INVNVASSSNTLFDALLCSYRLCDS-------- 124
+IL+ TL NR A +L+R+ I+ NV + S +L L S RL D+
Sbjct: 52 TILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYS-SLITGLCKSGRLADAERRLHEMD 110
Query: 125 ------SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAE 178
+ + F A+ YA KL + M + P + + ++ + L R +
Sbjct: 111 SKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVD 170
Query: 179 VALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI 238
A+ M +PNV T + + + KS + ++ L+ M G++ VS N LI
Sbjct: 171 EAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI 230
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
GY G + LAL + M + + PN+ ++N ++ G G++ +A F M+
Sbjct: 231 KGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRND 290
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
+ +TY +I+G + + LF ++ +V+PD Y +I L + G +A L
Sbjct: 291 LDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 174/426 (40%), Gaps = 53/426 (12%)
Query: 30 LHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKF 89
L+ L P ++ +L + + L FF W H+++ + ++ L+ R+F
Sbjct: 104 LNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQF 163
Query: 90 KTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTF 149
++ + N LF L+ + +A+ + ++ A
Sbjct: 164 GAVWGLIEEMRKENPQLIEPELFVVLV-----------------QRFASADMVKKAIEVL 206
Query: 150 LRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKS 209
M ++GF P+ Y ++ A CK
Sbjct: 207 DEMPKFGF-----------------------------------EPDEYVFGCLLDALCKH 231
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF 269
G + A + E M+ M + F +L+ G+C G + A + M P++V +
Sbjct: 232 GSVKDAAKLFEDMR-MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDY 290
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
L++G+ GK+ +AY + +M+ PN Y LI ++ E M++F EM R
Sbjct: 291 TNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER 350
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
+ + D++TY AL+ G CK GK K ++ ++ K L+P+ T+ ++ + + E
Sbjct: 351 YECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEE 410
Query: 390 AFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYN 449
++ M I Y P+ + ++I + CK + AV++ +M + ++P + N
Sbjct: 411 CLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMIN 470
Query: 450 GLSRCG 455
GL+ G
Sbjct: 471 GLASQG 476
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 158/344 (45%), Gaps = 11/344 (3%)
Query: 139 LNKLRDATHTFLRM-----KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD--- 190
LN+ DA + R K+ + ++E + + L ++R+ EMR++
Sbjct: 120 LNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQ 179
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
I P ++ + ++ + + + +A+E L++M G P F L+ C G + A
Sbjct: 180 LIEPELFVV--LVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDA 237
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
K+ M R N+ F +L+ G+C+ GK+ EA V +M A P+ V Y L++G
Sbjct: 238 AKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSG 296
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
Y+ G L +M R +P+ Y LI LCK + ++A + E+++ +
Sbjct: 297 YANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEAD 356
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
T++AL++G C ++ + + M G P+E T+ ++ K E F+ ++++
Sbjct: 357 VVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELME 416
Query: 431 DMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
M PD GI + + + G + A+ L +EME L P
Sbjct: 417 KMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSP 460
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 37/302 (12%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
F ++ + + K+ +A + ++M E GF P + LS + A R+MR
Sbjct: 255 FTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMR 314
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
R PN ++I A CK + A++ +M+ VV++ AL+SG
Sbjct: 315 RRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG-------- 366
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
FCK GK+ + Y V +M + P+ +TY ++
Sbjct: 367 ---------------------------FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIM 399
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
+ + + E + L E+M + + PDI YN +I CK G+ K+A L E++++ L
Sbjct: 400 VAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS 459
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIG-YSPNE-STFGMLISVFCKNEDFDGAV 426
P TF +I G + A ++ M + G +S ++ T +L++ K++ + A
Sbjct: 460 PGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAK 519
Query: 427 QV 428
V
Sbjct: 520 DV 521
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 162/332 (48%), Gaps = 2/332 (0%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
+++ + + +A N + A F M+++ P E+ +A +++ + + A+ +M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
R I+P+ T N +I A SG+ ALE +KM D G+ P +V+ N ++S Y +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM--KVANVAPNTVTYN 305
AL LM +V P+ TFN +I K G+ +A +F+ M K A P+ VT+
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
++++ YS G E +FE M +KP+I++YNAL+ G + A +++ ++ ++
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
++P+ +++ L+ +A +++ M PN T+ LI + N A
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
V++ R M + P+ + L SR +K
Sbjct: 445 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 476
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 191/441 (43%), Gaps = 26/441 (5%)
Query: 55 LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIIN------------- 101
L E W +C P + +T+ L++ +++ A +++ ++
Sbjct: 165 LFFEMQKW--SCKPDA---ETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNL 219
Query: 102 VNVASSSNTLFDALLCSYRLCDSSP----LVFDAVFKTYANLNKLRDATHTFLRMKEYGF 157
+N SS +AL ++ D+ + + V Y + + A F MK
Sbjct: 220 INACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKV 279
Query: 158 LPTLESCNAFLSSLLQLRRAEVALAFY---REMRRDCISPNVYTLNMVICAYCKSGDLPR 214
P + N + L +L ++ AL + RE R +C P+V T ++ Y G++
Sbjct: 280 RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC-RPDVVTFTSIMHLYSVKGEIEN 338
Query: 215 ALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLIN 274
E M GL P +VS+NAL+ Y G+ G AL + + + P+VV++ L+N
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 275 GFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKP 334
+ + + +A VF M+ PN VTYN LI+ Y G + +F +M ++ +KP
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 335 DILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIY 394
++++ L+ + K ++ + N + +++ I E+A +Y
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 518
Query: 395 RSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRC 454
+SM + TF +LIS C+ + A+ L++M D S+ + S++ S+
Sbjct: 519 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 578
Query: 455 GRKRLALELCSEMEAKRLLPE 475
G+ A + ++M+ P+
Sbjct: 579 GQVTEAESIFNQMKMAGCEPD 599
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 177/419 (42%), Gaps = 19/419 (4%)
Query: 73 LQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP------ 126
L TH+I+L + R++ A S + V + T + C +L SS
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 127 -------------LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ 173
+ F ++ Y+ ++ + F M G P + S NA + +
Sbjct: 308 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 367
Query: 174 LRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
+ AL+ +++++ I P+V + ++ +Y +S +A E M+ P VV+
Sbjct: 368 HGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT 427
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
+NALI Y + G L A+++ M + PNVV+ TL+ + K V S +
Sbjct: 428 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 487
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
+ NT YN+ I Y E + L++ M + +VK D +T+ LI G C+ K
Sbjct: 488 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP 547
Query: 354 KAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
+A + +KE++ ++ +S+++ + A I+ M G P+ + ++
Sbjct: 548 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
+ +E + A ++ +M + PDS SAL ++ G+ L M K +
Sbjct: 608 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/348 (18%), Positives = 146/348 (41%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ ++A+ Y + L +A F +M++ G P + S L++ + ++
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 485
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
+ I+ N N I +Y + +L +A+ + M+ + V+F LISG C
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 545
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
A+ M + + +++++ + K+G++ EA +F++MK+A P+ + Y +
Sbjct: 546 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 605
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
+++ Y+ LF EM N ++PD + +AL+ K G+ L+ + +
Sbjct: 606 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE 665
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ + F + + +RA + + M S + ++ +F K+ + +
Sbjct: 666 IPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMM 725
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
++ ++ + + + L L G R +E+ M + P
Sbjct: 726 KLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQP 773
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 269 FNTLINGFCKEGKLHEAYRVFSEMKVA-NVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
F LI + G + VF MK+ N YN +I +++ + LF EM
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM 169
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
+ KPD TY+ALI + G+ + A NL+ ++ + + P+ ST++ LI N
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
A ++ + MT G P+ T +++S + + A+ M + PD+ + +
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 289
Query: 448 YNGLSRCGRKRLALELCSEMEAKR 471
LS+ G+ AL+L + M KR
Sbjct: 290 IYCLSKLGQSSQALDLFNSMREKR 313
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 90/216 (41%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
V+ +V Y+ ++ +A F +MK G P + + + L + + A + EM
Sbjct: 567 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 626
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
+ I P+ + ++ A+ K G ++ M++ + T F + S
Sbjct: 627 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEW 686
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
A+ + +M Y S ++ N +++ F K GK+ ++F ++ + V N TY L
Sbjct: 687 KRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAIL 746
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALI 343
+ +GN + + E M ++P Y +I
Sbjct: 747 LEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 782
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 162/332 (48%), Gaps = 2/332 (0%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
+++ + + +A N + A F M+++ P E+ +A +++ + + A+ +M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
R I+P+ T N +I A SG+ ALE +KM D G+ P +V+ N ++S Y +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM--KVANVAPNTVTYN 305
AL LM +V P+ TFN +I K G+ +A +F+ M K A P+ VT+
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
++++ YS G E +FE M +KP+I++YNAL+ G + A +++ ++ ++
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
++P+ +++ L+ +A +++ M PN T+ LI + N A
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
V++ R M + P+ + L SR +K
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 344
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 191/441 (43%), Gaps = 26/441 (5%)
Query: 55 LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIIN------------- 101
L E W +C P + +T+ L++ +++ A +++ ++
Sbjct: 33 LFFEMQKW--SCKPDA---ETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNL 87
Query: 102 VNVASSSNTLFDALLCSYRLCDSSP----LVFDAVFKTYANLNKLRDATHTFLRMKEYGF 157
+N SS +AL ++ D+ + + V Y + + A F MK
Sbjct: 88 INACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKV 147
Query: 158 LPTLESCNAFLSSLLQLRRAEVALAFY---REMRRDCISPNVYTLNMVICAYCKSGDLPR 214
P + N + L +L ++ AL + RE R +C P+V T ++ Y G++
Sbjct: 148 RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC-RPDVVTFTSIMHLYSVKGEIEN 206
Query: 215 ALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLIN 274
E M GL P +VS+NAL+ Y G+ G AL + + + P+VV++ L+N
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 275 GFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKP 334
+ + + +A VF M+ PN VTYN LI+ Y G + +F +M ++ +KP
Sbjct: 267 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 326
Query: 335 DILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIY 394
++++ L+ + K ++ + N + +++ I E+A +Y
Sbjct: 327 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 386
Query: 395 RSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRC 454
+SM + TF +LIS C+ + A+ L++M D S+ + S++ S+
Sbjct: 387 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 446
Query: 455 GRKRLALELCSEMEAKRLLPE 475
G+ A + ++M+ P+
Sbjct: 447 GQVTEAESIFNQMKMAGCEPD 467
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 177/419 (42%), Gaps = 19/419 (4%)
Query: 73 LQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP------ 126
L TH+I+L + R++ A S + V + T + C +L SS
Sbjct: 116 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 127 -------------LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ 173
+ F ++ Y+ ++ + F M G P + S NA + +
Sbjct: 176 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 235
Query: 174 LRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
+ AL+ +++++ I P+V + ++ +Y +S +A E M+ P VV+
Sbjct: 236 HGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT 295
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
+NALI Y + G L A+++ M + PNVV+ TL+ + K V S +
Sbjct: 296 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 355
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
+ NT YN+ I Y E + L++ M + +VK D +T+ LI G C+ K
Sbjct: 356 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP 415
Query: 354 KAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
+A + +KE++ ++ +S+++ + A I+ M G P+ + ++
Sbjct: 416 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 475
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
+ +E + A ++ +M + PDS SAL ++ G+ L M K +
Sbjct: 476 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 534
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/348 (18%), Positives = 146/348 (41%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ ++A+ Y + L +A F +M++ G P + S L++ + ++
Sbjct: 294 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 353
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
+ I+ N N I +Y + +L +A+ + M+ + V+F LISG C
Sbjct: 354 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 413
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
A+ M + + +++++ + K+G++ EA +F++MK+A P+ + Y +
Sbjct: 414 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 473
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
+++ Y+ LF EM N ++PD + +AL+ K G+ L+ + +
Sbjct: 474 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE 533
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ + F + + +RA + + M S + ++ +F K+ + +
Sbjct: 534 IPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMM 593
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
++ ++ + + + L L G R +E+ M + P
Sbjct: 594 KLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQP 641
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%)
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
YN +I +++ + LF EM + KPD TY+ALI + G+ + A NL+ ++
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
+ + P+ ST++ LI N A ++ + MT G P+ T +++S + +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR 471
A+ M + PD+ + + LS+ G+ AL+L + M KR
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 181
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 90/216 (41%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
V+ +V Y+ ++ +A F +MK G P + + + L + + A + EM
Sbjct: 435 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 494
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
+ I P+ + ++ A+ K G ++ M++ + T F + S
Sbjct: 495 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEW 554
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
A+ + +M Y S ++ N +++ F K GK+ ++F ++ + V N TY L
Sbjct: 555 KRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAIL 614
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALI 343
+ +GN + + E M ++P Y +I
Sbjct: 615 LEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 650
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 184/421 (43%), Gaps = 56/421 (13%)
Query: 56 SLEFFNWVHNCNPSSH-TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDA 114
SL FFNW + + H + ++ ++ R+F A ++ + + NV S T
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIET---- 188
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
F + + Y +A H F RM++YG +P + + +S+L +
Sbjct: 189 --------------FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRK 234
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
RRA A +F+ + +KD P V+ +
Sbjct: 235 RRASEAQSFF-----------------------------------DSLKD-RFEPDVIVY 258
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
L+ G+C G + A K+ M + PNV T++ +I+ C+ G++ A+ VF++M
Sbjct: 259 TNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD 318
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
+ APN +T+N L+ + + G E ++++ +M + +PD +TYN LI C+D +
Sbjct: 319 SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLEN 378
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
A ++ + K NASTF+ + + + A ++Y M PN T+ +L+
Sbjct: 379 AVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMR 438
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM-EAKRLL 473
+F ++ D +++ ++M D+ + P+ L G A +L EM E K L
Sbjct: 439 MFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLT 498
Query: 474 P 474
P
Sbjct: 499 P 499
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 208/538 (38%), Gaps = 76/538 (14%)
Query: 13 DFVNIAHSHLIHSQWENLHP--LSTSLTPFRVKHILLKLKN---DDVLSLEFFNWVHNCN 67
D V + L+ W + ST L + V IL L D + L FF W
Sbjct: 81 DCVETIRNVLVKHNWIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLYFFRWSELWI 140
Query: 68 PSSHTLQTHSILLHTL-ANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP 126
H+ ++ S ++H L + N ++ +L + + S L L R+ D
Sbjct: 141 GVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRI-DRRV 199
Query: 127 L--VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
L VF + K+ A ++ ++G P+ C + L +L++ E+A F
Sbjct: 200 LETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFV 259
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
M N L++ I YC G + E L MK G+ P +V+F I C
Sbjct: 260 EHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKA 319
Query: 245 GLLGLA----LKMK----------------------------SLMGNYRVSPNVVTFNTL 272
G L A K+K L+ ++R+ PN+ +++
Sbjct: 320 GFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSF 379
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF-------- 324
++ C G + A +F E+ + P+ V Y T+I+GY +G + + F
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 325 -----------------------EEMGRNQ----VKPDILTYNALILGLCKDGKTKKAAN 357
E + RN +K D++TYN L+ G K + K
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
L+ E+ + P+ +T++ LI VR + A +I + G+ P+ F +I F
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
K DF A + M D M PD SAL +G + R A+ L +++ L P+
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 161/369 (43%), Gaps = 44/369 (11%)
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNM 201
L++AT ++K +G S ++ + ++ + E A+ R + PN++ +
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSS 378
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG---------------- 245
+ C +GD+ RA +++ ++GL P V + +I GYCN G
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 246 ----------LLGLALKMKSL---------MGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
L+G + S+ M + +VVT+N L++G+ K +L++ +
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGL 346
+ EM+ A ++P+ TYN LI+ G + + E+ R P L + +I G
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Query: 347 CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
K G ++A L + + P+ T SAL+ G C E+A ++ + G P+
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 407 STFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSE 466
+ LI +C D + A +++ M+ R M P+ AL GL G++ + SE
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLE--GKRFVN----SE 672
Query: 467 MEAKRLLPE 475
A LL E
Sbjct: 673 THASMLLEE 681
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 1/299 (0%)
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
L+ S+RL + V+ + + + A+ F + E G LP + L
Sbjct: 363 LIHSFRL-RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL 421
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
R + A ++ + + P++ T ++I A + G + A MK GL VV++
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
N L+ GY L ++ M + +SP+V T+N LI+ G + EA + SE+
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
P+T+ + +I G+S+ G+ + L+ M ++KPD++T +AL+ G CK + +K
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
A L +L L P+ ++ LI G C + E+A ++ M G PNEST L+
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 123/245 (50%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
Y NL + A F + + G P+L + + + + A + +R M+ + + +
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
V T N ++ Y K+ L + E +++M+ G+SP V ++N LI +G + A ++ S
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
+ P+ + F +I GF K G EA+ ++ M + P+ VT + L++GY +
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
E + LF ++ +KPD++ YN LI G C G +KA L+ + + ++PN ST
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 376 ALITG 380
AL+ G
Sbjct: 658 ALVLG 662
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 137 ANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
+ + DA F MK G + + N + + + EMR ISP+V
Sbjct: 454 SRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
T N++I + G + A E + ++ G P+ ++F +I G+ +G A +
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M + R+ P+VVT + L++G+CK ++ +A +F+++ A + P+ V YNTLI+GY +G+
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
E L M + + P+ T++AL+LGL +GK
Sbjct: 634 IEKACELIGLMVQRGMLPNESTHHALVLGL--EGK 666
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 208/538 (38%), Gaps = 76/538 (14%)
Query: 13 DFVNIAHSHLIHSQWENLHP--LSTSLTPFRVKHILLKLKN---DDVLSLEFFNWVHNCN 67
D V + L+ W + ST L + V IL L D + L FF W
Sbjct: 81 DCVETIRNVLVKHNWIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLYFFRWSELWI 140
Query: 68 PSSHTLQTHSILLHTL-ANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP 126
H+ ++ S ++H L + N ++ +L + + S L L R+ D
Sbjct: 141 GVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRI-DRRV 199
Query: 127 L--VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
L VF + K+ A ++ ++G P+ C + L +L++ E+A F
Sbjct: 200 LETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFV 259
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
M N L++ I YC G + E L MK G+ P +V+F I C
Sbjct: 260 EHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKA 319
Query: 245 GLLGLA----LKMK----------------------------SLMGNYRVSPNVVTFNTL 272
G L A K+K L+ ++R+ PN+ +++
Sbjct: 320 GFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSF 379
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF-------- 324
++ C G + A +F E+ + P+ V Y T+I+GY +G + + F
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 325 -----------------------EEMGRNQ----VKPDILTYNALILGLCKDGKTKKAAN 357
E + RN +K D++TYN L+ G K + K
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
L+ E+ + P+ +T++ LI VR + A +I + G+ P+ F +I F
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
K DF A + M D M PD SAL +G + R A+ L +++ L P+
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 161/369 (43%), Gaps = 44/369 (11%)
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNM 201
L++AT ++K +G S ++ + ++ + E A+ R + PN++ +
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSS 378
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG---------------- 245
+ C +GD+ RA +++ ++GL P V + +I GYCN G
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 246 ----------LLGLALKMKSL---------MGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
L+G + S+ M + +VVT+N L++G+ K +L++ +
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGL 346
+ EM+ A ++P+ TYN LI+ G + + E+ R P L + +I G
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Query: 347 CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
K G ++A L + + P+ T SAL+ G C E+A ++ + G P+
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 407 STFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSE 466
+ LI +C D + A +++ M+ R M P+ AL GL G++ + SE
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLE--GKRFVN----SE 672
Query: 467 MEAKRLLPE 475
A LL E
Sbjct: 673 THASMLLEE 681
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 1/299 (0%)
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
L+ S+RL + V+ + + + A+ F + E G LP + L
Sbjct: 363 LIHSFRL-RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL 421
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
R + A ++ + + P++ T ++I A + G + A MK GL VV++
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
N L+ GY L ++ M + +SP+V T+N LI+ G + EA + SE+
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
P+T+ + +I G+S+ G+ + L+ M ++KPD++T +AL+ G CK + +K
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
A L +L L P+ ++ LI G C + E+A ++ M G PNEST L+
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 123/245 (50%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
Y NL + A F + + G P+L + + + + A + +R M+ + + +
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
V T N ++ Y K+ L + E +++M+ G+SP V ++N LI +G + A ++ S
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
+ P+ + F +I GF K G EA+ ++ M + P+ VT + L++GY +
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
E + LF ++ +KPD++ YN LI G C G +KA L+ + + ++PN ST
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 376 ALITG 380
AL+ G
Sbjct: 658 ALVLG 662
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 137 ANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
+ + DA F MK G + + N + + + EMR ISP+V
Sbjct: 454 SRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
T N++I + G + A E + ++ G P+ ++F +I G+ +G A +
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M + R+ P+VVT + L++G+CK ++ +A +F+++ A + P+ V YNTLI+GY +G+
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
E L M + + P+ T++AL+LGL +GK
Sbjct: 634 IEKACELIGLMVQRGMLPNESTHHALVLGL--EGK 666
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 175/405 (43%), Gaps = 25/405 (6%)
Query: 64 HNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCD 123
H PSS T + L++ + A +L + N NV N FD +CS
Sbjct: 128 HGAFPSSLTFCS---LIYRFVEKGEMDNAIEVLEMMTNKNV----NYPFDNFVCS----- 175
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFL-PTLESCNAFLSSLLQLRRAEVALA 182
AV + + K A F + G L P L + +S+L QL + +
Sbjct: 176 -------AVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRD 228
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
R + + + + I Y K G L AL +M + G++ VVS++ LI G
Sbjct: 229 LVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLS 288
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
+G + AL + M V PN++T+ +I G CK GKL EA+ +F+ + + +
Sbjct: 289 KEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEF 348
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
Y TLI+G + GN + +M + ++P ILTYN +I GLC G+ +A + K
Sbjct: 349 LYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK-- 406
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
+V + T+S L+ N + +I R + +L+ F +
Sbjct: 407 ---GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAY 463
Query: 423 DGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
A + R M + +TPD+ + + G + G+ ALE+ +E+
Sbjct: 464 GEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 153/336 (45%), Gaps = 22/336 (6%)
Query: 62 WVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRL 121
W HT +T LLH++ N K ++ + +N L DA+L L
Sbjct: 543 WEKGLYLDIHTSRT---LLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILL---L 596
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C F+A + Y + + + T TF + L S +A+L L + E L
Sbjct: 597 CKRGS--FEAAIEVYMIMRR-KGLTVTFPSTILKTLVDNLRSLDAYL---LVVNAGETTL 650
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+ S +V ++I CK G L +AL K G++ +++N+LI+G
Sbjct: 651 S----------SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGL 700
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
C +G L AL++ + N + P+ VT+ LI+ CKEG +A ++ M + PN
Sbjct: 701 CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 760
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
+ YN++++GY ++G E MR+ +V PD T +++I G CK G ++A ++ E
Sbjct: 761 IIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 820
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
N+ + F LI G C + E A + R M
Sbjct: 821 FKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 199 LNMVICAYCKSGDLPRALETLEKMKDMGLSPT---------------------------- 230
LN I CK G A+E M+ GL+ T
Sbjct: 589 LNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGET 648
Query: 231 ------VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
V+ + +I+G C +G L AL + S + V+ N +T+N+LING C++G L E
Sbjct: 649 TLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVE 708
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
A R+F ++ + P+ VTY LI+ + G +L + M + P+I+ YN+++
Sbjct: 709 ALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVD 768
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
G CK G+T+ A +V + P+A T S++I G C + + E A ++ S
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISA 828
Query: 405 NESTFGMLISVFCKNEDFDGAVQVLRDML 433
+ F LI FC + A +LR+ML
Sbjct: 829 DFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 182/440 (41%), Gaps = 55/440 (12%)
Query: 86 NRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSP---------LVFDAVFKTY 136
NR F + +R I ++ + NT+ + L + R+ ++ + + + +Y
Sbjct: 364 NRAFSMLGDMEQRGIQPSILTY-NTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSY 422
Query: 137 ANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
+ + R E L CN L + L + A A YR M ++P+
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
T +I YCK+G + ALE +++ +S V +N +I C KG+L A ++
Sbjct: 483 ATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIE 541
Query: 257 MGNYRVSPNVVTFNTLI-----NG------------------------------FCKEGK 281
+ + ++ T TL+ NG CK G
Sbjct: 542 LWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGS 601
Query: 282 LHEAYRVFSEMKVANVA---PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKP-DIL 337
A V+ M+ + P+T+ TL++ + L G + D++
Sbjct: 602 FEAAIEVYMIMRRKGLTVTFPSTIL-KTLVDNLRSL----DAYLLVVNAGETTLSSMDVI 656
Query: 338 TYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
Y +I GLCK+G KA NL + N T+++LI G C + A +++ S+
Sbjct: 657 DYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL 716
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
+IG P+E T+G+LI CK F A ++L M+ + + P+ I +++ +G + G+
Sbjct: 717 ENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQT 776
Query: 458 RLALELCSEMEAKRLLPEGF 477
A+ + S R+ P+ F
Sbjct: 777 EDAMRVVSRKMMGRVTPDAF 796
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 163/384 (42%), Gaps = 76/384 (19%)
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREM---------------------------- 187
GF PTL S + FL L +L++ L FY ++
Sbjct: 21 GFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDA 80
Query: 188 --------RRDCISPNVYTLNMVICAYCKSGDLP-RALETLEK-MKDMGLSPTVVSFNAL 237
+ I P + L+ +I + + D P + L L +++ G P+ ++F +L
Sbjct: 81 EKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSL 140
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF--NTLINGFCKEGKLHEAYRVF-SEMKV 294
I + KG + A+++ +M N V+ F + +I+GFCK GK A F S +
Sbjct: 141 IYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDS 200
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRL--------FE--------------------- 325
+ PN VTY TL++ Q+G + L FE
Sbjct: 201 GVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVD 260
Query: 326 ------EMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
EM + D+++Y+ LI GL K+G ++A L+ ++ K+ + PN T++A+I
Sbjct: 261 ALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIR 320
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
G C E AF ++ + S+G +E + LI C+ + + A +L DM R + P
Sbjct: 321 GLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQP 380
Query: 440 DSGILSALYNGLSRCGRKRLALEL 463
+ + NGL GR A E+
Sbjct: 381 SILTYNTVINGLCMAGRVSEADEV 404
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 183/453 (40%), Gaps = 64/453 (14%)
Query: 55 LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIIN------------- 101
L+L FF + L T++ L+ L K ++RR+ +
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 102 VNVASSSNTLFDALLCSYRLCD--------SSPLVFDAVFKTYANLNKLRDATHTFLRMK 153
++ L DAL+ + + S ++ D + K + +A +M
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKE----GNVEEALGLLGKMI 304
Query: 154 EYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLP 213
+ G P L + A + L ++ + E A + + I + + +I C+ G+L
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 214 RALETLEKMKDMGLSPTVVSFNALISGYC-----------NKGLLGLALKMKSLMGNY-- 260
RA L M+ G+ P+++++N +I+G C +KG++G + +L+ +Y
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIK 424
Query: 261 -----------------RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
++ ++V N L+ F G EA ++ M ++ P+T T
Sbjct: 425 VQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTAT 484
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
Y T+I GY + G E + +F E+ ++ V + YN +I LCK G A ++ EL
Sbjct: 485 YATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELW 543
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML---ISVFCKNE 420
+ L + T L+ + + + + ++ GML I + CK
Sbjct: 544 EKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLN---SDVCLGMLNDAILLLCKRG 600
Query: 421 DFDGAVQVLRDMLDRSMTPD--SGILSALYNGL 451
F+ A++V M + +T S IL L + L
Sbjct: 601 SFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNL 633
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 144 DATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVI 203
DA M G +P + N+ + +L + E A+ ++P+ +T++ +I
Sbjct: 743 DAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMI 802
Query: 204 CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVS 263
YCK GD+ AL + KD +S F LI G+C KG + A + L+ VS
Sbjct: 803 KGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEA---RGLLREMLVS 859
Query: 264 PNVVTF----------NTLINGF----CKEGKLHEAYRVFSEMKVANVAP---NTVTYNT 306
+VV + I GF C++G++ +A ++ E+ + + P N +Y
Sbjct: 860 ESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEIS-STIYPSGKNLGSYQR 918
Query: 307 L--INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
L +N ++ EE+ + D + ++ + LC GK ++A V
Sbjct: 919 LQFLNDVNE-----------EEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFV 962
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 119/277 (42%), Gaps = 30/277 (10%)
Query: 91 TAHSILRRIINVNVASSSNTLFDAL-LCSY---RLCDSSPLVFDAVFKTYANLNKLRDAT 146
++ ++ I +N L AL LCS+ R + + ++++ L +A
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 147 HTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAY 206
F ++ G +P+ + + +L + A M + PN+ N ++ Y
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
Query: 207 CKSGDLPRALETLEKMKDMG-LSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPN 265
CK G A+ + + K MG ++P + +++I GYC KG + AL + + + +S +
Sbjct: 771 CKLGQTEDAMRVVSR-KMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Query: 266 VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE 325
F LI GFC +G++ EA + EM V+ + LIN R+
Sbjct: 830 FFGFLFLIKGFCTKGRMEEARGLLREMLVSE------SVVKLIN------------RVDA 871
Query: 326 EMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
E+ ++ + ++ LC+ G+ +A ++ E+
Sbjct: 872 ELAESE------SIRGFLVELCEQGRVPQAIKILDEI 902
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 188/429 (43%), Gaps = 66/429 (15%)
Query: 45 ILLKLKNDDVLSLEFFNW--VHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINV 102
++ +L+++ L+ F W C+ ++ +++ L N++KF A ++R + NV
Sbjct: 129 LIWELRDEWRLAFLAFKWGEKRGCDDQ----KSCDLMIWVLGNHQKFNIAWCLIRDMFNV 184
Query: 103 NVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLE 162
+ + +F L+ D YA N A TF M ++ P E
Sbjct: 185 S-KDTRKAMF--------------LMMD----RYAAANDTSQAIRTFDIMDKFKHTPYDE 225
Query: 163 SCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM 222
+ L CA C+ G + +A E +
Sbjct: 226 AFQGLL-----------------------------------CALCRHGHIEKAEEFMLAS 250
Query: 223 KDMGLSPTVVSFNALISGYCNKGL-LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGK 281
K + V FN +++G+CN + A ++ MGNY ++PN +++ +I+ F K G
Sbjct: 251 KKL-FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGN 309
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNA 341
L ++ R++ EMK +AP YN+L+ ++ + M+L +++ +KPD +TYN+
Sbjct: 310 LFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNS 369
Query: 342 LILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIG 401
+I LC+ GK A N++ + +NL P TF A + N E+ ++ M
Sbjct: 370 MIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISD 425
Query: 402 YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLAL 461
P E TF +++ K + + A+++ +M + + + A GL CG A
Sbjct: 426 LGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAR 485
Query: 462 ELCSEMEAK 470
E+ SEM++K
Sbjct: 486 EIYSEMKSK 494
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 116/257 (45%), Gaps = 5/257 (1%)
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANL-NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ 173
+L S +L F+ + + N+ + +A + M Y P +S + +S +
Sbjct: 247 MLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSK 306
Query: 174 LRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
+ +L Y EM++ ++P + N ++ + A++ ++K+ + GL P V+
Sbjct: 307 VGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVT 366
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
+N++I C G L +A + + M + +SP V TF+ + E L V +MK
Sbjct: 367 YNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLE----VLGQMK 422
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
++++ P T+ ++ + E ++++ EM R ++ + Y A I GL G +
Sbjct: 423 ISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLE 482
Query: 354 KAANLVKELDKDNLVPN 370
KA + E+ V N
Sbjct: 483 KAREIYSEMKSKGFVGN 499
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 162/316 (51%), Gaps = 5/316 (1%)
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
N ++SL + R E A + R + P+V T N +I Y + + A +M++
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
G+ P V ++N+LISG +L L++ M + +SP++ ++NTL++ + K G+ E
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 285 AYRVFSE-MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALI 343
A+++ E + +A + P TYN L++ + G+ + + LF+ + +++VKP+++TYN LI
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILI 195
Query: 344 LGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYS 403
GLCK + +++EL K PNA T++ ++ E+ Q++ M GY+
Sbjct: 196 NGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYT 255
Query: 404 PNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILS--ALYNGLSRCGRKRLAL 461
+ ++S K + A + + +++ RS T I+S L N + G
Sbjct: 256 FDGFANCAVVSALIKTGRAEEAYECMHELV-RSGTRSQDIVSYNTLLNLYFKDGNLDAVD 314
Query: 462 ELCSEMEAKRLLPEGF 477
+L E+E K L P+ +
Sbjct: 315 DLLEEIEMKGLKPDDY 330
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 134/277 (48%), Gaps = 4/277 (1%)
Query: 194 PNVYT--LNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
P + T LN+ + + CK +L RA L +G+ P V+++N LI GY + A
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
+ M + P+V T+N+LI+G K L+ ++F EM + ++P+ +YNTL++ Y
Sbjct: 69 AVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCY 128
Query: 312 SQIGNCETGMR-LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
++G + L E++ + P I TYN L+ LCK G T A L K L K + P
Sbjct: 129 FKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPE 187
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
T++ LI G C + R + GY+PN T+ ++ ++ K + + +Q+
Sbjct: 188 LMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFL 247
Query: 431 DMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
M T D A+ + L + GR A E E+
Sbjct: 248 KMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHEL 284
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 158/346 (45%), Gaps = 3/346 (0%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ ++ + K Y + +A RM+E G P + + N+ +S + L + E
Sbjct: 49 ITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDE 108
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETL-EKMKDMGLSPTVVSFNALISGYCNKG 245
M +SP++++ N ++ Y K G A + L E + GL P + ++N L+ C G
Sbjct: 109 MLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSG 168
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
A+++ + + RV P ++T+N LING CK ++ + E+K + PN VTY
Sbjct: 169 HTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYT 227
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
T++ Y + E G++LF +M + D A++ L K G+ ++A + EL +
Sbjct: 228 TMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRS 287
Query: 366 NL-VPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDG 424
+ +++ L+ N + + + G P++ T ++++ + G
Sbjct: 288 GTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGG 347
Query: 425 AVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
A + L + + M P + L +GL + G A+ L + ME +
Sbjct: 348 AEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR 393
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
G LP + + N + + + A A R MR I P+V T N +I K+ L R
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 216 LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM----KSLMGNYRVSPNVVTFNT 271
L+ ++M GLSP + S+N L+S Y G G A K+ L G + P + T+N
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAG---LVPGIDTYNI 159
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ---IGNCETGMRLFEEMG 328
L++ CK G A +F +K + V P +TYN LING + +G+ + MR E+
Sbjct: 160 LLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVDWMMR---ELK 215
Query: 329 RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE 388
++ P+ +TY ++ K + +K L ++ K+ + A+++ +E
Sbjct: 216 KSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAE 275
Query: 389 RAFQIYRSMTSIGY-SPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
A++ + G S + ++ L++++ K+ + D +L ++ + + PD + +
Sbjct: 276 EAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Query: 448 YNGLSRCG 455
NGL G
Sbjct: 336 VNGLLNIG 343
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 25/245 (10%)
Query: 73 LQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAV 132
L T++IL++ L +R+ + ++R + ++ T + +
Sbjct: 188 LMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVT------------------YTTM 229
Query: 133 FKTYANLNKLRDATHTFLRMKEYGF-LPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
K Y ++ FL+MK+ G+ +C A +S+L++ RAE A E+ R
Sbjct: 230 LKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANC-AVVSALIKTGRAEEAYECMHELVRSG 288
Query: 192 I-SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
S ++ + N ++ Y K G+L + LE+++ GL P + +++G N G G A
Sbjct: 289 TRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGA 348
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
K + +G + P+VVT N LI+G CK G + A R+F+ M+V + TY ++++
Sbjct: 349 EKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHN 404
Query: 311 YSQIG 315
+ G
Sbjct: 405 LCKDG 409
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 45/294 (15%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
D+ ++ DA+ K+ N + H R+K P L + N ++ L + RR
Sbjct: 155 DTYNILLDALCKSGHTDNAIELFKHLKSRVK-----PELMTYNILINGLCKSRRVGSVDW 209
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
RE+++ +PN T ++ Y K+ + + L+ KMK G + + A++S
Sbjct: 210 MMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALI 269
Query: 243 NKGLLGLALK-MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
G A + M L+ + S ++V++NTL+N + K+G L + E+++ + P+
Sbjct: 270 KTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDD 329
Query: 302 VTYNTLINGYSQIGN------------------------------CETG-----MRLFEE 326
T+ ++NG IGN C+ G MRLF
Sbjct: 330 YTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFAS 389
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
M +V+ D TY +++ LCKDG+ A+ L+ + +S A+++G
Sbjct: 390 M---EVR-DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSG 439
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 185/409 (45%), Gaps = 23/409 (5%)
Query: 70 SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASS---SNTLFDALLCSYRLCDSSP 126
S ++ +++ L++ N +++T+ +L R+ N ++ S NT+ +A C
Sbjct: 173 SRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-------CARGG 225
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
L ++ + +A M+ G P + + N LS+ + A +R
Sbjct: 226 LDWEGLLGLFA-------------EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRT 272
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M I P++ T + ++ + K L + + L +M G P + S+N L+ Y G
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS 332
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ A+ + M +PN T++ L+N F + G+ + ++F EMK +N P+ TYN
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI + + G + + LF +M ++PD+ TY +I K G + A +++ + ++
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+VP++ ++ +I E A + +M +G +P+ TF L+ F + +
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESE 512
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+L ++D + + +A + G+ A++ +ME R P+
Sbjct: 513 AILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 561
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 156/313 (49%), Gaps = 2/313 (0%)
Query: 180 ALAFYREMRRDCI-SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI 238
+L ++ M+R PN + ++I + G L + LE ++M G+S +V S+ ALI
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 183
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY-RVFSEMKVANV 297
+ Y G +L++ M N ++SP+++T+NT+IN + G E +F+EM+ +
Sbjct: 184 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 243
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
P+ VTYNTL++ + G + +F M + PD+ TY+ L+ K + +K +
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
L+ E+ +P+ ++++ L+ + + A ++ M + G +PN +T+ +L+++F
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
++ +D Q+ +M + PD+ + L G + + L +M + + P+
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 478 GQEKIAITSPENG 490
E I + G
Sbjct: 424 TYEGIIFACGKGG 436
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/414 (18%), Positives = 164/414 (39%), Gaps = 25/414 (6%)
Query: 73 LQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAV 132
+ ++++LL A + K A + ++ ++NT + +
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT------------------YSVL 358
Query: 133 FKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCI 192
+ + D FL MK P + N + + + + + +M + I
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 193 SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK 252
P++ T +I A K G A + L+ M + P+ ++ +I + L AL
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
+ M +P++ TF++L+ F + G + E+ + S + + + N T+N I Y
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
Q G E ++ + +M +++ PD T A++ + +E+ +++P+
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIM 598
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
+ ++ + ++ M S S G +I + D D Q++ +
Sbjct: 599 CYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIK---GDYDDDSNWQIVEYV 655
Query: 433 LDRSMTPDSGI----LSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQEKI 482
LD+ + G+ +AL + L G+K A + +E + L PE F + K+
Sbjct: 656 LDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKL 709
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-KSLMGNY 260
+I Y + G A + ++M + T +SFNAL++ N L + K L G
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
+ P+V ++NTLI G C +G EA + E++ + P+ +T+N L++ G E G
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+++ M VK DI +YNA +LGL + K+++ +L +L + L P+ TF+A+I G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
+ A Y+ + G P + F L+ CK D + A ++ +++ + + D
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVD 351
Query: 441 SGILSALYNGLSRCGRKRLALEL 463
+L + + L + ++ A E+
Sbjct: 352 EAVLQEVVDALVKGSKQDEAEEI 374
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 104/205 (50%)
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
+ + P V S+N LI G C KG A+ + + N + P+ +TFN L++ +GK E
Sbjct: 171 LSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEE 230
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
++++ M NV + +YN + G + E + LF+++ N++KPD+ T+ A+I
Sbjct: 231 GEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK 290
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
G +GK +A KE++K+ P F++L+ C + E A+++ + + +
Sbjct: 291 GFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLV 350
Query: 405 NESTFGMLISVFCKNEDFDGAVQVL 429
+E+ ++ K D A +++
Sbjct: 351 DEAVLQEVVDALVKGSKQDEAEEIV 375
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 39/268 (14%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR-RDCISP 194
Y + +A F M E T S NA L++ + ++ ++ ++E+ + I P
Sbjct: 116 YGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEP 175
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG--------- 245
+V + N +I C G A+ ++++++ GL P ++FN L+ KG
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 246 ------------------LLGLALKMKS---------LMGNYRVSPNVVTFNTLINGFCK 278
LLGLA++ KS L GN + P+V TF +I GF
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGN-ELKPDVFTFTAMIKGFVS 294
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
EGKL EA + E++ P +N+L+ + G+ E+ L +E+ ++ D
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV 354
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDN 366
++ L K K +A +V EL K N
Sbjct: 355 LQEVVDALVKGSKQDEAEEIV-ELAKTN 381
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL-DKD 365
+IN Y ++G E ++F+EM K L++NAL+ K + KEL K
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
++ P+ ++++ LI G C + + A + + + G P+ TF +L+ F+
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
Q+ M+++++ D +A GL+ + + L +++ L P+ F
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVF 283
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 149/326 (45%), Gaps = 10/326 (3%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV----- 179
SP +FD+V + + A L S + F+ + + RA +
Sbjct: 134 SPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAI 193
Query: 180 -ALAFYREMRRDCISP-NVYTLNMVICAYCKSGDLPRALETLEKMK---DMGLSPTVVSF 234
A F R C S + L +++ A CK G + A LE++ D P+V F
Sbjct: 194 RAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIF 253
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
N L++G+ L A K+ M V P VVT+ TLI G+C+ ++ A V EMK+
Sbjct: 254 NILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKM 313
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
A + N + +N +I+G + G + + E + P I+TYN+L+ CK G
Sbjct: 314 AEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPG 373
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
A+ ++K + + P +T++ N +E +Y + G+SP+ T+ +++
Sbjct: 374 ASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILK 433
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPD 440
+ C++ A+QV ++M +R + PD
Sbjct: 434 MLCEDGKLSLAMQVNKEMKNRGIDPD 459
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 120/256 (46%)
Query: 157 FLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRAL 216
++P++ N L+ + R+ + A + EM+ + P V T +I YC+ + A+
Sbjct: 246 WVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAM 305
Query: 217 ETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF 276
E LE+MK + + FN +I G G L AL M P +VT+N+L+ F
Sbjct: 306 EVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNF 365
Query: 277 CKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDI 336
CK G L A ++ M V P T TYN +S+ E GM L+ ++ PD
Sbjct: 366 CKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDR 425
Query: 337 LTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRS 396
LTY+ ++ LC+DGK A + KE+ + P+ T + LI C E AF+ + +
Sbjct: 426 LTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDN 485
Query: 397 MTSIGYSPNESTFGML 412
G P TF M+
Sbjct: 486 AVRRGIIPQYITFKMI 501
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%)
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
P+V N+++ + +S L +A + E+MK M + PTVV++ LI GYC + +A+++
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
M + N + FN +I+G + G+L EA + V P VTYN+L+ + +
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
G+ ++ + M V P TYN K KT++ NL +L + P+ T
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
+ ++ C A Q+ + M + G P+ T MLI + C+ E + A + + +
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV 487
Query: 434 DRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
R + P + NGL G +A L S M +
Sbjct: 488 RRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSS 523
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
+F+ + + KL+ A + MK PT+ + + ++RR ++A+ EM
Sbjct: 252 IFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEM 311
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
+ + N N +I ++G L AL +E+ PT+V++N+L+ +C G L
Sbjct: 312 KMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDL 371
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
A K+ +M V P T+N F K K E ++ ++ A +P+ +TY+ +
Sbjct: 372 PGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLI 431
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
+ + G M++ +EM + PD+LT LI LC+ ++A + +
Sbjct: 432 LKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI 491
Query: 368 VPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYS 403
+P TF + G + S+ A ++ M+S+ +S
Sbjct: 492 IPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHS 527
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 67/140 (47%)
Query: 120 RLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV 179
R D + ++ FK ++ NK + + + ++ E G P + + L L + + +
Sbjct: 384 RGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSL 443
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A+ +EM+ I P++ T M+I C+ L A E + G+ P ++F + +
Sbjct: 444 AMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDN 503
Query: 240 GYCNKGLLGLALKMKSLMGN 259
G +KG+ +A ++ SLM +
Sbjct: 504 GLRSKGMSDMAKRLSSLMSS 523
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 189/474 (39%), Gaps = 61/474 (12%)
Query: 56 SLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDAL 115
+LE F W H+ T+ L H L R+F T + +L + + + +F +
Sbjct: 59 ALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTI 118
Query: 116 LCSY---RLCDSSPLVFDAVFK-------------------------------------- 134
+ + RL V D V K
Sbjct: 119 IRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGI 178
Query: 135 -----TYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
TY L N++ D MK G P N L +L + + A +
Sbjct: 179 HGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARS 238
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
EM+ PN T N++I AYC L +++ LEK +G P VV+ ++ C
Sbjct: 239 LMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLC 294
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
N+G + AL++ + + +VV NTL+ G+C GK+ A R F EM+ PN
Sbjct: 295 NEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVE 354
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
TYN LI GY +G ++ + F +M + ++ + T+N LI GL G+T +++ +
Sbjct: 355 TYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
Query: 363 DKDNLVPNA--STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
+ V A ++ +I G N E A + M + + +F LIS+ C+
Sbjct: 415 QDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFK-LISL-CEKG 472
Query: 421 DFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
D M+ P + L + S+ G+ +LEL ++M + LP
Sbjct: 473 GMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLP 526
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 163/398 (40%), Gaps = 58/398 (14%)
Query: 75 THSILLHTLANNRKFKTAHSILRRI-----INVNVASSSNTLFDALLCSYRL---CDSSP 126
++ LLH L N K A S++ + + N+ S+ L+ S L C S
Sbjct: 219 VYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLG 278
Query: 127 LVFDAV-----FKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
V D V + N ++ +A R++ G + +CN + L + VA
Sbjct: 279 FVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQ 338
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
F+ EM R PNV T N++I YC G L AL+T MK + +FN LI G
Sbjct: 339 RFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 398
Query: 242 CNKGLLGLALKMKSLMGN------YRVSPNVVTFNTLINGF------------------- 276
G LK+ +M + R+ P +N +I GF
Sbjct: 399 SIGGRTDDGLKILEMMQDSDTVHGARIDP----YNCVIYGFYKENRWEDALEFLLKMEKL 454
Query: 277 --------------CKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMR 322
C++G + + + +M P+ + + LI+ YSQ G E +
Sbjct: 455 FPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLE 514
Query: 323 LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC 382
L +M P T+NA+I+G CK K V+++ + VP+ +++ L+ C
Sbjct: 515 LINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELC 574
Query: 383 VRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
V+ + ++A+ ++ M P+ S + L+ FC ++
Sbjct: 575 VKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FCLSQ 610
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 181/442 (40%), Gaps = 17/442 (3%)
Query: 49 LKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS 108
+K D ++ EFF + + T+ IL+ L+ + +L+ + VA ++
Sbjct: 158 VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNA 217
Query: 109 ---NTLFDALLCSYRLCDSSPLV----------FDAVFKTYANLNKLRDATHTFLRMKEY 155
NTL AL + ++ + L+ F+ + Y N KL + +
Sbjct: 218 VVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSL 277
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
GF+P + + + L R AL + +V N ++ YC G + A
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVA 337
Query: 216 LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLING 275
+M+ G P V ++N LI+GYC+ G+L AL + M + N TFNTLI G
Sbjct: 338 QRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRG 397
Query: 276 FCKEGKLHEAYRVFSEMKVANV--APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVK 333
G+ + ++ M+ ++ YN +I G+ + E + +M ++
Sbjct: 398 LSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM--EKLF 455
Query: 334 PDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQI 393
P + + ++ LC+ G ++ + VP+ LI E + ++
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLEL 515
Query: 394 YRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSR 453
M + GY P STF +I FCK + ++ + DM +R PD+ + L L
Sbjct: 516 INDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCV 575
Query: 454 CGRKRLALELCSEMEAKRLLPE 475
G + A L S M K ++P+
Sbjct: 576 KGDIQKAWLLFSRMVEKSIVPD 597
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 168/361 (46%), Gaps = 44/361 (12%)
Query: 153 KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISP---NVYTLNMVICAYCKS 209
K+ G++ ++ ++ +S L ++R+ + A EMR+ SP N TL ++I YC
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAV 210
Query: 210 GDLPRALETLEKMK----DMGLSP------------------------------TVVSFN 235
D+ +A+ T K +MG+ SFN
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFN 270
Query: 236 ALISGYCNK-GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
+++G+CN G A ++ MGN V +VV+++++I+ + K G L++ ++F MK
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ-VKPDILTYNALILGLCKDGKTK 353
+ P+ YN +++ ++ L + M + ++P+++TYN+LI LCK KT+
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 354 KAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
+A + E+ + L P T+ A + + E F++ M +G P T+ MLI
Sbjct: 391 EAKQVFDEMLEKGLFPTIRTYHAFMR---ILRTGEEVFELLAKMRKMGCEPTVETYIMLI 447
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
C+ DFD + + +M ++++ PD + +GL G+ A EM+ K +
Sbjct: 448 RKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMR 507
Query: 474 P 474
P
Sbjct: 508 P 508
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 159/385 (41%), Gaps = 61/385 (15%)
Query: 42 VKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSIL----- 96
V IL +++ND + FF W +++ + ++ L RKF TA +++
Sbjct: 130 VVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK 189
Query: 97 ---------------RRIINV-NVASSSNTL--------------FDALL---CSYR--- 120
R+ V +V + NT F +LL C Y+
Sbjct: 190 FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVS 249
Query: 121 ------LCDSSPLVFDA-----VFKTYAN-LNKLRDATHTFLRMKEYGFLPTLESCNAFL 168
C+ FDA V + N + R+A ++ M G + S ++ +
Sbjct: 250 DAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMI 309
Query: 169 SSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA---LETLEKMKDM 225
S + L + M+++CI P+ N V+ A K+ + A ++T+E+ K
Sbjct: 310 SCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK-- 367
Query: 226 GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
G+ P VV++N+LI C A ++ M + P + T++ + + G+ E
Sbjct: 368 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTGE--EV 424
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
+ + ++M+ P TY LI + + + + L++EM V PD+ +Y +I G
Sbjct: 425 FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHG 484
Query: 346 LCKDGKTKKAANLVKELDKDNLVPN 370
L +GK ++A KE+ + PN
Sbjct: 485 LFLNGKIEEAYGYYKEMKDKGMRPN 509
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 170/386 (44%), Gaps = 30/386 (7%)
Query: 119 YRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAE 178
Y D V V + + N K++ A + M+E GF + +C A + +
Sbjct: 276 YLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLP 335
Query: 179 VALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI 238
AL F +M + N +++++ YCK ALE ++ +DM + V +N
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAF 395
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
G + A ++ M + + P+V+ + TLI+G+C +GK+ +A + EM ++
Sbjct: 396 DALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMS 455
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
P+ +TYN L++G ++ G+ E + ++E M KP+ +T + +I GLC K K+A +
Sbjct: 456 PDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDF 515
Query: 359 VKELD------KDNLVPN----------------------ASTFSALITGQCVRNNSERA 390
L+ K + V S + L C+ E+A
Sbjct: 516 FSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKA 575
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD-MLDRSMTPDSGILSALYN 449
+ + M++ P S G +I FCK + A QVL D M++R + PD + + +
Sbjct: 576 HDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREA-QVLFDTMVERGLIPDLFTYTIMIH 634
Query: 450 GLSRCGRKRLALELCSEMEAKRLLPE 475
R + A L +M+ + + P+
Sbjct: 635 TYCRLNELQKAESLFEDMKQRGIKPD 660
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 157/404 (38%), Gaps = 76/404 (18%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
++ F + L ++ +A MK+ G +P + + + + AL EM
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS--------------- 233
+ +SP++ T N+++ ++G LE E+MK G P V+
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 234 -----FNAL-----------ISGYCNKGLLGLALKM---------KSL------------ 256
F++L + GYC GL A K KS+
Sbjct: 511 EAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEG 570
Query: 257 -----------MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
M YRV P +I FCK + EA +F M + P+ TY
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYT 630
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK-------------DGKT 352
+I+ Y ++ + LFE+M + +KPD++TY L+ K +
Sbjct: 631 IMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK 690
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
+KA+ +++E + + ++ LI QC NN E+A +++ M G P+ + L
Sbjct: 691 RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTL 750
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
IS + + D AV ++ ++ + P +A+ + + R
Sbjct: 751 ISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKR 794
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 156/378 (41%), Gaps = 44/378 (11%)
Query: 131 AVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD 190
A+ K Y +L +AT + K + +++CN ++ + + + + + ++++++
Sbjct: 151 ALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQL 210
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG----- 245
+ N YT +V+ A C+ G+L A L + + +V + I+G C G
Sbjct: 211 GLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLCVTGETEKA 264
Query: 246 --------------------LLGLA-------LKMKSL------MGNYRVSPNVVTFNTL 272
+LG+ +KMK+ M +V +
Sbjct: 265 VALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAV 324
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQV 332
I+ +CK L EA +M + N V + ++ Y ++ C + F+E +
Sbjct: 325 IDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNI 384
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ 392
D + YN L K G+ ++A L++E+ +VP+ ++ LI G C++ A
Sbjct: 385 FLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD 444
Query: 393 IYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLS 452
+ M G SP+ T+ +L+S +N + +++ M P++ S + GL
Sbjct: 445 LIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Query: 453 RCGRKRLALELCSEMEAK 470
+ + A + S +E K
Sbjct: 505 FARKVKEAEDFFSSLEQK 522
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/482 (19%), Positives = 196/482 (40%), Gaps = 38/482 (7%)
Query: 7 FSGTD----------LDFVNIAHS--------HLIHSQWENLHPLSTSLTPFRVKHILLK 48
FSG D +DF + H ++ S + L LS P V+++L +
Sbjct: 105 FSGEDEKAQKVLHEEVDFSPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKR 164
Query: 49 LKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS 108
L++ FFNWV + SH + ++ +L R ++ +
Sbjct: 165 CFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEM--------- 215
Query: 109 NTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFL 168
CD + + Y K+ F +M++ GF + N +
Sbjct: 216 ---------EKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMI 266
Query: 169 SSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLS 228
SL R ++AL FY+EM I+ + T M++ KS + + M +
Sbjct: 267 RSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEI 326
Query: 229 PTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRV 288
+F L+ +C G + AL++ + N + + F L+ G C+ ++ +A +
Sbjct: 327 SEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEI 386
Query: 289 FSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
MK + + V Y +I+GY + + + FE + ++ P + TY ++ L K
Sbjct: 387 VDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFK 445
Query: 349 DGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNEST 408
+ +K NL E+ ++ + P++ +A++ G +N A++++ SM G P +
Sbjct: 446 LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKS 505
Query: 409 FGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
+ + + C++ +D +++ M + I S + + + + G K + L E++
Sbjct: 506 YSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKE-KIHLIKEIQ 564
Query: 469 AK 470
+
Sbjct: 565 KR 566
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 147/329 (44%), Gaps = 39/329 (11%)
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+ + EMRR T ++I Y ++G A+ T ++MKDMGL P+ +F LI+
Sbjct: 699 SLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVL 758
Query: 242 CNKGLLGLALKMKSL------------------------MGNYRVS------------PN 265
C K + ++ +GN + + P
Sbjct: 759 CEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV 818
Query: 266 VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE 325
V ++ I C+ GKL EA + + + TY ++++G Q G+ + +
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 326 EMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRN 385
M KP + Y +LI+ K+ + +K ++++ ++ P+ T++A+I G
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLG 938
Query: 386 NSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILS 445
E A+ +R+M G SP+ T+ I+ C+ + A+++L +MLD+ + P +
Sbjct: 939 KVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFR 998
Query: 446 ALYNGLSRCGR---KRLALELCSEMEAKR 471
++ GL+R G+ R+AL+ S + A+R
Sbjct: 999 TVFYGLNREGKHDLARIALQKKSALVAQR 1027
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 150/384 (39%), Gaps = 21/384 (5%)
Query: 28 ENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNR 87
E L + TP V +L K L FF+WV N H + +++ + +
Sbjct: 633 EALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGK 692
Query: 88 KFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATH 147
FK S+ + + +T + + Y A
Sbjct: 693 DFKQMRSLFYEMRRQGCLITQDT------------------WAIMIMQYGRTGLTNIAIR 734
Query: 148 TFLRMKEYGFLPTLESCNAFLSSLLQL--RRAEVALAFYREMRRDCISPNVYTLNMVICA 205
TF MK+ G +P+ + ++ L + R E A +REM R P+ + +
Sbjct: 735 TFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGC 794
Query: 206 YCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPN 265
C+ G+ A L+ + +G P V+++ I C G L AL + R +
Sbjct: 795 LCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLD 853
Query: 266 VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE 325
T+ ++++G + G L +A + MK P Y +LI + + E + +
Sbjct: 854 QYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQ 913
Query: 326 EMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRN 385
+M +P ++TY A+I G GK ++A N + +++ P+ T+S I C
Sbjct: 914 KMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQAC 973
Query: 386 NSERAFQIYRSMTSIGYSPNESTF 409
SE A ++ M G +P+ F
Sbjct: 974 KSEDALKLLSEMLDKGIAPSTINF 997
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 13/266 (4%)
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVT 268
SG+ +A + L + D SP V +++ G + L+ + +++ L ++R P +V
Sbjct: 106 SGEDEKAQKVLHEEVD--FSPVVHEITSVVRG--DDVLVSMEDRLEKL--SFRFEPEIVE 159
Query: 269 FNTLINGFCKEGKL-HEAYRVFSEMKVANVAPNTV-TYNTLINGYSQIGNCETGMRLFEE 326
N L F K+ H A R F+ +K + + V YNT+++ + N + L E
Sbjct: 160 -NVLKRCF----KVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSE 214
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
M +N DI T+ LI K K K + +++ K +A+ ++ +I C+
Sbjct: 215 MEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGR 274
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
+ A + Y+ M G + T+ ML+ K+E D + DM+ +
Sbjct: 275 GDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY 334
Query: 447 LYNGLSRCGRKRLALELCSEMEAKRL 472
L G+ + ALEL E++ K +
Sbjct: 335 LLKSFCVSGKIKEALELIRELKNKEM 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/444 (19%), Positives = 168/444 (37%), Gaps = 46/444 (10%)
Query: 61 NWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIIN-------------VNVASS 107
+ V C S H LL + + K K A ++R + N V
Sbjct: 319 DMVRICEISEH--DAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCR 376
Query: 108 SNTLFDAL----LCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLES 163
+N + DAL + R D S V+ + Y N + A F +K+ G P + +
Sbjct: 377 ANRMVDALEIVDIMKRRKLDDSN-VYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVST 435
Query: 164 CNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMK 223
+ L +L++ E + EM + I P+ + V+ + + A + M+
Sbjct: 436 YTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSME 495
Query: 224 DMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLH 283
+ G+ PT S++ + C +K+ + M ++ F+ +I+ K G+
Sbjct: 496 EKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKE 555
Query: 284 EAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALI 343
+ + + K +N +Y +NG G E EE+ + P ++ +AL
Sbjct: 556 KIHLIKEIQKRSN------SYCDELNGS---GKAEFSQE--EELVDDYNCPQLVQQSALP 604
Query: 344 LGLCKDGKTKK-------AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRS 396
L K +++ E ++ L + F+ + + +R+ + + R
Sbjct: 605 PALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRF 664
Query: 397 MTSI----GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS--MTPDSGILSALYNG 450
+ + GY N + M I V +DF + +M + +T D+ + + G
Sbjct: 665 FSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYG 724
Query: 451 LSRCGRKRLALELCSEMEAKRLLP 474
R G +A+ EM+ L+P
Sbjct: 725 --RTGLTNIAIRTFKEMKDMGLIP 746
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 165/350 (47%), Gaps = 11/350 (3%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+F + + AN + + + G L N+ L+ + + A F+R
Sbjct: 182 FLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRR 241
Query: 187 MR-RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
MR RD I+ N V+ AYC++G A+E +++M+ G+SP +V++N LI GY G
Sbjct: 242 MRERDVIA-----WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
A+ + M + ++ +V T+ +I+G G ++A +F +M +A V PN VT
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
+ ++ S + G + + D+L N+L+ K GK + A + +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
++ T++++ITG C +A++++ M PN T+ +IS + KN D A
Sbjct: 417 DVY----TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 426 VQVLRDM-LDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ + + M D + ++ + + G + G+K ALEL +M+ R +P
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 198/459 (43%), Gaps = 70/459 (15%)
Query: 52 DDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTL 111
DD L + NC HS+++ L + + ++SIL +
Sbjct: 180 DDFLFPKILQGCANCGDVEAGKVIHSVVIK-LGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 112 FDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL 171
F R+ + + +++V Y K +A M++ G P L + N +
Sbjct: 239 FR------RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 172 LQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
QL + + A+ ++M I+ +V+T +I +G +AL+ KM G+ P
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 232 VSFNALISG-----YCNKG--LLGLALKM----KSLMGNYRV------------------ 262
V+ + +S N+G + +A+KM L+GN V
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 263 --SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
+ +V T+N++I G+C+ G +AY +F+ M+ AN+ PN +T+NT+I+GY + G+
Sbjct: 413 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 321 MRLFEEMGRN-QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSAL-- 377
M LF+ M ++ +V+ + T+N +I G ++GK +A L +++ +PN+ T +L
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 378 -------------ITGQCVRNNSERAFQIYRSMT-------SIGYS---------PNEST 408
I G +R N + + ++T I YS + T
Sbjct: 533 ACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIIT 592
Query: 409 FGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
+ LI + + + A+ + M + +TP+ G LS++
Sbjct: 593 WNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSI 631
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 159/355 (44%), Gaps = 18/355 (5%)
Query: 124 SSPLVF--DAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
+ P VF + YA + DA F M+E L + +A + + + R
Sbjct: 111 TEPDVFVETKLLSMYAKCGCIADARKVFDSMRE----RNLFTWSAMIGAYSRENRWREVA 166
Query: 182 AFYREMRRDCISPNVYTLNMVI--CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
+R M +D + P+ + ++ CA C GD+ + +G+S + N++++
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANC--GDVEAGKVIHSVVIKLGMSSCLRVSNSILA 224
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
Y G L A K M +V+ +N+++ +C+ GK EA + EM+ ++P
Sbjct: 225 VYAKCGELDFATKFFRRM----RERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISP 280
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
VT+N LI GY+Q+G C+ M L ++M + D+ T+ A+I GL +G +A ++
Sbjct: 281 GLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
+++ +VPNA T + ++ + +++ +G+ + L+ ++ K
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
G ++ R + D D +++ G + G A EL + M+ L P
Sbjct: 401 ----GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 133/302 (44%), Gaps = 25/302 (8%)
Query: 151 RMKEYGFLPTLESC----NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAY 206
++K +L LESC + L +L R + E P+V+ ++ Y
Sbjct: 78 KVKRSTYLKLLESCIDSGSIHLGRILHAR-----FGLFTE-------PDVFVETKLLSMY 125
Query: 207 CKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNV 266
K G + A + + M++ L +++A+I Y + K+ LM V P+
Sbjct: 126 AKCGCIADARKVFDSMRERNL----FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDD 181
Query: 267 VTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
F ++ G G + + S + ++ N+++ Y++ G + + F
Sbjct: 182 FLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRR 241
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
M D++ +N+++L C++GK ++A LVKE++K+ + P T++ LI G
Sbjct: 242 MRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS-GILS 445
+ A + + M + G + + T+ +IS N A+ + R M + P++ I+S
Sbjct: 298 CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 446 AL 447
A+
Sbjct: 358 AV 359
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 144/354 (40%), Gaps = 52/354 (14%)
Query: 93 HSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAV-----------FKTYANLNK 141
HSI ++ ++ N+L D +L D+ VFD+V Y
Sbjct: 375 HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARK-VFDSVKNKDVYTWNSMITGYCQAGY 433
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC-ISPNVYTLN 200
A F RM++ P + + N +S ++ A+ ++ M +D + N T N
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK------ 254
++I Y ++G ALE KM+ P V+ +L+ N LLG + +
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN--LLGAKMVREIHGCVL 551
Query: 255 ------------SLMGNYRVS---------------PNVVTFNTLINGFCKEGKLHEAYR 287
+L Y S +++T+N+LI G+ G A
Sbjct: 552 RRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALA 611
Query: 288 VFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN-QVKPDILTYNALILGL 346
+F++MK + PN T +++I + +GN + G ++F + + + P + +A++
Sbjct: 612 LFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLY 671
Query: 347 CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
+ + ++A ++E+ N+ + + +TG + + + A ++ S+
Sbjct: 672 GRANRLEEALQFIQEM---NIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSL 722
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 120/265 (45%), Gaps = 15/265 (5%)
Query: 207 CKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNV 266
C++G L A + L+ + G ++ L+ + G + L + + G + P+V
Sbjct: 57 CRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLF-TEPDV 115
Query: 267 VTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
L++ + K G + +A +VF M+ N+ T++ +I YS+ +LF
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSRENRWREVAKLFRL 171
Query: 327 MGRNQVKPDILTYNALILGL--CKDGKTKKAAN-LVKELDKDNLVPNASTFSALITGQCV 383
M ++ V PD + ++ G C D + K + +V +L + + +++ A+
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
+ + + F+ R I ++ ++ +C+N + AV+++++M ++P
Sbjct: 232 LDFATKFFRRMRERDVIAWNS-------VLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 444 LSALYNGLSRCGRKRLALELCSEME 468
+ L G ++ G+ A++L +ME
Sbjct: 285 WNILIGGYNQLGKCDAAMDLMQKME 309
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 175/388 (45%), Gaps = 45/388 (11%)
Query: 91 TAHSILRRIINVNVASSSNTLFDA--LLCSYRLCDSS----PLVFDAVFKTYANLNKLRD 144
+ H+ +INV+V N +D+ L+C + L SS + F+ + Y + ++
Sbjct: 136 STHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKE 195
Query: 145 ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVIC 204
A ++++ E ++PT + T ++I
Sbjct: 196 AESLYVQLLESRYVPTED-----------------------------------TYALLIK 220
Query: 205 AYCKSGDLPRALETLEKMKDMGLSPTVVS---FNALISGYCN-KGLLGLALKMKSLMGNY 260
AYC +G + RA L +M++ +SP + +NA I G KG A+ + M
Sbjct: 221 AYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD 280
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
R P T+N +IN + K K + +++++ EM+ PN TY L+N +++ G CE
Sbjct: 281 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 340
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+FE++ + ++PD+ YNAL+ + G AA + + P+ ++++ ++
Sbjct: 341 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 400
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
A ++ M +G +P + +L+S + K D ++++M + + PD
Sbjct: 401 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460
Query: 441 SGILSALYNGLSRCGRKRLALELCSEME 468
+ +L+++ N R G+ ++ +EME
Sbjct: 461 TFVLNSMLNLYGRLGQFTKMEKILAEME 488
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 146/310 (47%)
Query: 143 RDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMV 202
+A F RMK PT E+ N ++ + ++ ++ Y EMR PN+ T +
Sbjct: 268 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 327
Query: 203 ICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRV 262
+ A+ + G +A E E++++ GL P V +NAL+ Y G A ++ SLM +
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 387
Query: 263 SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMR 322
P+ ++N +++ + + G +A VF EMK +AP ++ L++ YS+ +
Sbjct: 388 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 447
Query: 323 LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC 382
+ +EM N V+PD N+++ + G+ K ++ E++ + ST++ LI
Sbjct: 448 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 507
Query: 383 VRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSG 442
ER +++ + + P+ T+ I + + + + ++V +M+D PD G
Sbjct: 508 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGG 567
Query: 443 ILSALYNGLS 452
L + S
Sbjct: 568 TAKVLLSACS 577
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 175/388 (45%), Gaps = 45/388 (11%)
Query: 91 TAHSILRRIINVNVASSSNTLFDA--LLCSYRLCDSS----PLVFDAVFKTYANLNKLRD 144
+ H+ +INV+V N +D+ L+C + L SS + F+ + Y + ++
Sbjct: 114 STHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKE 173
Query: 145 ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVIC 204
A ++++ E ++PT + T ++I
Sbjct: 174 AESLYVQLLESRYVPTED-----------------------------------TYALLIK 198
Query: 205 AYCKSGDLPRALETLEKMKDMGLSPTVVS---FNALISGYCN-KGLLGLALKMKSLMGNY 260
AYC +G + RA L +M++ +SP + +NA I G KG A+ + M
Sbjct: 199 AYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD 258
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
R P T+N +IN + K K + +++++ EM+ PN TY L+N +++ G CE
Sbjct: 259 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 318
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+FE++ + ++PD+ YNAL+ + G AA + + P+ ++++ ++
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
A ++ M +G +P + +L+S + K D ++++M + + PD
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Query: 441 SGILSALYNGLSRCGRKRLALELCSEME 468
+ +L+++ N R G+ ++ +EME
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEME 466
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 151/323 (46%), Gaps = 3/323 (0%)
Query: 143 RDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMV 202
+A F RMK PT E+ N ++ + ++ ++ Y EMR PN+ T +
Sbjct: 246 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 305
Query: 203 ICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRV 262
+ A+ + G +A E E++++ GL P V +NAL+ Y G A ++ SLM +
Sbjct: 306 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 365
Query: 263 SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMR 322
P+ ++N +++ + + G +A VF EMK +AP ++ L++ YS+ +
Sbjct: 366 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 425
Query: 323 LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC 382
+ +EM N V+PD N+++ + G+ K ++ E++ + ST++ LI
Sbjct: 426 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 485
Query: 383 VRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSG 442
ER +++ + + P+ T+ I + + + + ++V +M+D PD G
Sbjct: 486 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGG 545
Query: 443 ILSALYNGLSRCGRKRLALELCS 465
L LS C + ++ S
Sbjct: 546 TAKVL---LSACSSEEQVEQVTS 565
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 147/327 (44%), Gaps = 18/327 (5%)
Query: 126 PLVFDAVFKTYANLNKLRD----ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
PL F + +L +D A RM + G P + + ++ A
Sbjct: 561 PLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAR 620
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
F+ + I P+++T ++I YC+ + +A E MK + P VV+++ L++
Sbjct: 621 EFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS- 679
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
L MK M + V P+VV + +IN +C L + Y +F +MK + P+
Sbjct: 680 ------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDV 733
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
VTY L+ + L EM VKPD+ Y LI CK G +A + +
Sbjct: 734 VTYTVLLKNKPE-------RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQ 786
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
+ + + P+A+ ++ALI C + A I+ M G P+ + LI+ C+N
Sbjct: 787 MIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGF 846
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALY 448
AV+++++ML++ + P LSA++
Sbjct: 847 VLKAVKLVKEMLEKGIKPTKASLSAVH 873
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 145/323 (44%), Gaps = 39/323 (12%)
Query: 182 AFYREMRRDCISPN--VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
AF R +R + P +TL +CA + + +A + L++M +G+ P + LI
Sbjct: 551 AFERFIRLEFPLPKSVYFTLFTSLCA--EKDYISKAQDLLDRMWKLGVEPEKSMYGKLIG 608
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
+C + A + ++ ++ P++ T+ +IN +C+ + +AY +F +MK +V P
Sbjct: 609 AWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKP 668
Query: 300 NTVTYNTL----------------------------INGYSQIGNCETGMRLFEEMGRNQ 331
+ VTY+ L IN Y + + + LF++M R +
Sbjct: 669 DVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRRE 728
Query: 332 VKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAF 391
+ PD++TY L+ K K NL +E+ ++ P+ ++ LI QC + A
Sbjct: 729 IVPDVVTYTVLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAK 781
Query: 392 QIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGL 451
+I+ M G P+ + + LI+ CK A + M++ + PD +AL G
Sbjct: 782 RIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGC 841
Query: 452 SRCGRKRLALELCSEMEAKRLLP 474
R G A++L EM K + P
Sbjct: 842 CRNGFVLKAVKLVKEMLEKGIKP 864
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/511 (20%), Positives = 198/511 (38%), Gaps = 81/511 (15%)
Query: 15 VNIAHSHLIHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQ 74
+ I+HS + + L L V +L +K+D L+L F + N + ++Q
Sbjct: 35 LTISHSEQVKEGTFDYKALE--LNDIGVLRVLNSMKDDPYLALSFLKRIEG-NVTLPSVQ 91
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPL---VFDA 131
++ ++ + K + L ++ ++ D L + S L V A
Sbjct: 92 AYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTA 151
Query: 132 VFKTYANLNKLRDATHTFLR-MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD 190
+ K YANL+ +A F R G P +++ N +S ++ R+++ + F+ E+ R
Sbjct: 152 LVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERL 211
Query: 191 CISPNVYTLNMVICAYCKSGD-------LPRAL--ET---------------LEKMKDMG 226
+ + +T +V+ A ++ D L R L ET L +M D+
Sbjct: 212 GLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIA 271
Query: 227 ---LSPTV------------VSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
L P +++ ++ G C + + A + M + + P+V ++
Sbjct: 272 YFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSA 331
Query: 272 LING-----------------------------------FCKEGKLHEAYRVFSEMKVAN 296
+I G +C+ G EAY +F E + N
Sbjct: 332 IIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETN 391
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
++ + V YN + ++G E + LF EM + PD++ Y LI G C GK A
Sbjct: 392 ISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAF 451
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
+L+ E+D P+ ++ L G ++ AF+ + M + G P T M+I
Sbjct: 452 DLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGL 511
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
+ D A + +S D+ ++
Sbjct: 512 IDAGELDKAEAFYESLEHKSRENDASMVKGF 542
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 144/350 (41%), Gaps = 15/350 (4%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
++ ++ + Y + +A F +E N +L +L + E A+ +RE
Sbjct: 362 VIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFRE 421
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M I+P+V +I C G A + + +M G +P +V +N L G GL
Sbjct: 422 MTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGL 481
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
A + +M N V P VT N +I G G+L +A + ++ + + +
Sbjct: 482 AQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA----S 537
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK-TKKAANLVKELDKD 365
++ G+ G + FE R + Y L LC + KA +L+ + K
Sbjct: 538 MVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKL 594
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
+ P S + LI C NN +A + + + + P+ T+ ++I+ +C+ + A
Sbjct: 595 GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQA 654
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ DM R + PD S L N KR EMEA ++P+
Sbjct: 655 YALFEDMKRRDVKPDVVTYSVLLNSDPELDMKR-------EMEAFDVIPD 697
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 154/377 (40%), Gaps = 29/377 (7%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
++ DA L M+++G P + +A + + A+ + +M + N ++
Sbjct: 306 RIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVS 365
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++ YC+ G+ A + ++ ++ +S V +N G + A+++ M
Sbjct: 366 SILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGK 425
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
++P+V+ + TLI G C +GK +A+ + EM P+ V YN L G + G +
Sbjct: 426 GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
+ M VKP +T+N +I GL G+ KA + L+ + +AS
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAA 545
Query: 381 QCVRNNSER------------AFQIYRS-----------------MTSIGYSPNESTFGM 411
C+ + ER F ++ S M +G P +S +G
Sbjct: 546 GCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGK 605
Query: 412 LISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR 471
LI +C+ + A + ++ + + PD + + N R + A L +M+ +
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRD 665
Query: 472 LLPEGFGQEKIAITSPE 488
+ P+ + + PE
Sbjct: 666 VKPDVVTYSVLLNSDPE 682
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 178/413 (43%), Gaps = 37/413 (8%)
Query: 74 QTHSILLHTLANNRKFKTAHSILRRIIN-----VNVASSSNTLFDALLCSYRLCDSSPLV 128
+T ++++ L +R + ++ R+I V ++ N L + L YR+ D+ LV
Sbjct: 126 RTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLV 185
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
FD M+ G LP + + + ++R EVA + EMR
Sbjct: 186 FD---------------------MRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMR 224
Query: 189 RDCISPNVYTLNMVICAYCKSGDLP--RAL--ETLEKMK-DMGLSPTVVSFNALISGYCN 243
I PN TL+++I + K D+ R L E E MK + S +F L+ C
Sbjct: 225 VCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCR 284
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
+G ++ M + +I+ C+ + H A R+ MK + P +
Sbjct: 285 EGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTS 344
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
YN +I+G + G C +L EE + P TY L+ LCK+ T KA N+++ +
Sbjct: 345 YNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELML 404
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
+ ++ + G CV +N + SM P+E T +I+ CK D
Sbjct: 405 RKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVD 464
Query: 424 GAVQVLRDML-DRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
A++VL DM+ + PD+ L+ + GL GR AL++ + R++PE
Sbjct: 465 DAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLN-----RVMPE 512
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 5/229 (2%)
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGL-SPTVVSFNALISGYCNKG 245
++ DC P+ YTLN VI CK G + A++ L+ M +P V+ N ++ G +G
Sbjct: 439 LQGDC-RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQG 497
Query: 246 LLGLALK-MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
AL + +M ++ P VV +N +I G K K EA VF +++ A+V ++ TY
Sbjct: 498 RAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTY 557
Query: 305 NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
+I+G + + ++++ + D Y A + GLC+ G A + + +L
Sbjct: 558 AIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLAD 617
Query: 365 DNLVPNASTFSALITGQCVRNNSER-AFQIYRSMTSIGYSPNESTFGML 412
+PN ++ +I +C R+ +R A+QI M G +P+ T+ +L
Sbjct: 618 SGAIPNVVCYNTVI-AECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 143/346 (41%), Gaps = 50/346 (14%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD 211
MK G P S NA + L + A E P+ YT +++ + CK D
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 212 LPRALETLEKM-KDMGLSPTVVSFNALISGYC----NKGLLGLALKMKSLMGNYRVSPNV 266
+A LE M + G T + +N + G C +L + + M L G+ R P+
Sbjct: 393 TGKARNVLELMLRKEGADRTRI-YNIYLRGLCVMDNPTEILNVLVSM--LQGDCR--PDE 447
Query: 267 VTFNTLINGFCKEGKLHEAYRVFSEMKVAN-VAPNTVTYNTLINGYSQIGNCETGMRLFE 325
T NT+ING CK G++ +A +V +M AP+ VT NT++ G G E + +
Sbjct: 448 YTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLN 507
Query: 326 E-MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS--------- 375
M N++KP ++ YNA+I GL K K +A ++ +L+K ++ +++T++
Sbjct: 508 RVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVT 567
Query: 376 --------------------------ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
A + G C A + G PN +
Sbjct: 568 NKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCY 627
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS---GILSALYNGLS 452
+I+ ++ A Q+L +M PD+ IL L++ +
Sbjct: 628 NTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLHDSMD 673
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 125/285 (43%), Gaps = 10/285 (3%)
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG--YCNKGLLGLAL 251
P+ L+ VI + C +G A G P + N +I+ Y + L +
Sbjct: 88 PDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGV 147
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
+ + P++ +N L+N C ++ +A+++ +M+ P+ VT+ TLI GY
Sbjct: 148 IHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGY 207
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL-----DKDN 366
+I E ++F+EM ++P+ LT + LI G K + L+KEL ++ +
Sbjct: 208 CEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETD 267
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
A+ F+ L+ C F+I +M+ E +G +I C+ GA
Sbjct: 268 TSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAA 327
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSR---CGRKRLALELCSEME 468
+++ M + + P +A+ +GL + C R LE SE E
Sbjct: 328 RIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFE 372
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 203/456 (44%), Gaps = 39/456 (8%)
Query: 51 NDDVLSLEFFNWVHNCNPS-SHTLQTHSILLHTLANNRKFKTAHSI---LRRIINVNVAS 106
N + L++E F P+ +Q ++ ++ + + KF A + +R+ V
Sbjct: 205 NQESLAVEIFT---RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLI 261
Query: 107 SSNTLFDALLCS--------YRLCD---SSPLVFDAVFKTYANL-------NKLRDATHT 148
S NTL +A L S L D +S L DA+ TY L + L A
Sbjct: 262 SFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAI--TYNTLLSACSRDSNLDGAVKV 319
Query: 149 FLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK 208
F M+ + P L + NA +S + A A + E+ P+ T N ++ A+ +
Sbjct: 320 FEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFAR 379
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-KSLMGNYRVSPNVV 267
+ + E ++M+ MG +++N +I Y +G L LAL++ K + G +P+ +
Sbjct: 380 ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAI 439
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+ LI+ K + EA + SEM + P TY+ LI GY++ G E F M
Sbjct: 440 TYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
R+ KPD L Y+ ++ L + +T+KA L +++ D P+ + + +I G N S
Sbjct: 500 LRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRS 559
Query: 388 ERAFQIYRSMTSI-GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
+ + R M + G +P E + SV K E FD A + L+ + ++ L +
Sbjct: 560 DDIQKTIRDMEELCGMNPLE-----ISSVLVKGECFDLAARQLKVAITNGYELENDTLLS 614
Query: 447 LYNGLSRCGRKRLALELCSEME-----AKRLLPEGF 477
+ S GR A EL ++ +KRL+ E
Sbjct: 615 ILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEAL 650
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 162/344 (47%), Gaps = 1/344 (0%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
SP+ D + + Y + A +++ G P L++ N+ +S+ Q E A A +
Sbjct: 752 SPMYTD-IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIF 810
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
M RD SP V ++N+++ A C G L +E+++DMG + S ++ +
Sbjct: 811 NTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARA 870
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
G + K+ S M P + + +I CK ++ +A + SEM+ AN +
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 305 NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
N+++ Y+ I + + +++++ + ++PD TYN LI+ C+D + ++ L++++
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRN 990
Query: 365 DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDG 424
L P T+ +LI+ + E+A Q++ + S G + S + ++ + +
Sbjct: 991 LGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSK 1050
Query: 425 AVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
A ++L+ M + + P + L S G + A ++ S ++
Sbjct: 1051 AEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLK 1094
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 126/271 (46%)
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYR 261
+I AY K +A + ++ G +P + ++N+L+S Y G A + + M
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGM 321
SP V + N L++ C +G+L E Y V E++ + + +++ +++ GN
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 322 RLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQ 381
+++ M P I Y +I LCK + + A +V E+++ N + +++++
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 382 CVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
+ ++ Q+Y+ + G P+E+T+ LI ++C++ + +++ M + + P
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 442 GILSALYNGLSRCGRKRLALELCSEMEAKRL 472
+L + + A +L E+ +K L
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
+++++ K Y + + + R+KE G P + N + + RR E ++M
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
R + P + T +I A+ K L +A + E++ GL ++ ++ + G
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
A K+ +M N + P + T + L+ + G EA +V S +K V T+ Y+++
Sbjct: 1049 SKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSV 1108
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPD 335
I+ Y + + +G+ EM + ++PD
Sbjct: 1109 IDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 137/352 (38%), Gaps = 35/352 (9%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSL---LQLRRAEVALAFYREMRRDCISPNV 196
N+ D T M+E + LE + + L R+ +VA+ E+ D
Sbjct: 557 NRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELEND------ 610
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
TL ++ +Y SG A E LE +K+ + ALI +C L AL
Sbjct: 611 -TLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALD---- 665
Query: 257 MGNYRVSPNV--------VTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
Y P V + TL++ EA +VFS+++++ + +++
Sbjct: 666 --EYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMV 723
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDIL------TYNALILGLCKDGKTKKAANLVKEL 362
Y ++G ET ++ NQ + Y +I K +KA ++V L
Sbjct: 724 VVYCKLGFPETAHQVV-----NQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNL 778
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
+ P+ T+++L++ ERA I+ +M G SP + +L+ C +
Sbjct: 779 RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRL 838
Query: 423 DGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+ V+ ++ D + + + +R G ++ S M+A LP
Sbjct: 839 EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLP 890
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 152/354 (42%), Gaps = 39/354 (11%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
DS +V + + K NK+ A + + G +P N + + + R+E +L
Sbjct: 440 DSLSIVINCLVKA----NKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLK 495
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
EM+ + P+ +TLN + + D AL+ L+KM+ G P + L+ C
Sbjct: 496 LLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLC 555
Query: 243 ----------------NKGLLGLALK----MKSLMGNYRVS---------------PNVV 267
+G LG + + L+ N V P+V+
Sbjct: 556 ENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVI 615
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
++ LI CK + EA +F+EM + P TYN++I+G+ + G + G+ M
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
++ PD++TY +LI GLC G+ +A E+ + PN TF ALI G C S
Sbjct: 676 YEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWS 735
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
A +R M P+ + + L+S F +E+ + + R+M+ + P S
Sbjct: 736 GEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVS 789
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 139/320 (43%)
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
LP +S + ++ L++ + ++A+ ++ ++ + P N +I CK G +
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 216 LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLING 275
L+ L +MKD G+ P+ + N + + AL + M Y P + L+
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 276 FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
C+ G+ +A + ++ + V I+G + + G+ LF ++ N PD
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 336 ILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYR 395
++ Y+ LI LCK +T +A L E+ L P +T++++I G C +R
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 396 SMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
M +P+ T+ LI C + A+ +M + P+ AL GL +CG
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 456 RKRLALELCSEMEAKRLLPE 475
AL EME K + P+
Sbjct: 734 WSGEALVYFREMEEKEMEPD 753
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 185/442 (41%), Gaps = 38/442 (8%)
Query: 55 LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDA 114
L+ FFNW + + ++ + L+ R+ + +++ ++N
Sbjct: 88 LAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSR----------- 136
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGF-LPTLESCNAFLSSLLQ 173
C SP F + N + +A+ F R++E G +P + N L ++ +
Sbjct: 137 -------CFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISK 189
Query: 174 LRRAEVAL--AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
+ V L A +EMR + +TL V+ YC +G RAL ++ G
Sbjct: 190 SNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEH 249
Query: 232 VSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
+S L+ +C G + A ++ ++ + N T+ LI+GF KE ++ +A+++F +
Sbjct: 250 IS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEK 308
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
M+ + + Y+ LI G + + E + L+ E+ R+ + PD L+ ++ +
Sbjct: 309 MRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
Query: 352 TKKAAN-LVKELDKDN-LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYS------ 403
+ ++ ++DK + ++ S F I V + + S G S
Sbjct: 369 LSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLL 428
Query: 404 --------PNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
P+ + ++I+ K D AV +L D++ + P + + + G+ + G
Sbjct: 429 KDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEG 488
Query: 456 RKRLALELCSEMEAKRLLPEGF 477
R +L+L EM+ + P F
Sbjct: 489 RSEESLKLLGEMKDAGVEPSQF 510
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 150/367 (40%), Gaps = 27/367 (7%)
Query: 133 FKTYANL-------NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYR 185
+KTY L +++ A F +M+ G + + + L + + E+AL+ Y
Sbjct: 283 YKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYL 342
Query: 186 EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
E++R I P+ L ++C++ + +L R E + + D+ ++ + +L G+
Sbjct: 343 EIKRSGIPPDRGILGKLLCSFSEESELSRITEVI--IGDIDKKSVMLLYKSLFEGFIRND 400
Query: 246 LLGLALK-MKSLMGNYR-----------------VSPNVVTFNTLINGFCKEGKLHEAYR 287
L+ A +++LMGNY + P+ + + +IN K K+ A
Sbjct: 401 LVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVT 460
Query: 288 VFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLC 347
+ ++ + P + YN +I G + G E ++L EM V+P T N + L
Sbjct: 461 LLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLA 520
Query: 348 KDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNES 407
+ A +L+K++ P + L+ C + A + + G+ +
Sbjct: 521 ERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMV 580
Query: 408 TFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
I KNE D +++ RD+ PD L L + R A L +EM
Sbjct: 581 ASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEM 640
Query: 468 EAKRLLP 474
+K L P
Sbjct: 641 VSKGLKP 647
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 74/182 (40%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ + + K + +A F M G PT+ + N+ + + + L+
Sbjct: 615 IAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVR 674
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M D +P+V T +I C SG A+ +MK P ++F ALI G C G
Sbjct: 675 MYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGW 734
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
G AL M + P+ + +L++ F ++ + +F EM P +V N
Sbjct: 735 SGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNY 794
Query: 307 LI 308
++
Sbjct: 795 ML 796
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 5/270 (1%)
Query: 122 CDSSPLVFDAVFKTYANL-NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVA 180
C S F + + Y NL ++ A M ++G P+ +S N L+ L+ + +
Sbjct: 127 CRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEI 186
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
+ + + + LN++I C+SG+L AL+ L++ P V++F+ LI G
Sbjct: 187 HKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRG 246
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
+CNKG A K+ M R+ P+ +TFN LI+G K+G++ E + MKV PN
Sbjct: 247 FCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPN 306
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
TY ++ G + +M ++P L+Y ++LGLC+ + +++
Sbjct: 307 PGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLR 366
Query: 361 ELDKDNLVPNASTFSALITGQCV--RNNSE 388
++ VP + ++ QCV +NN +
Sbjct: 367 QMVNHGFVPKTLMWWKVV--QCVVSKNNDD 394
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%)
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVT 268
+G + RA+E L M D G P+ SFN +++ + L K+ V +
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 269 FNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMG 328
N LI G C+ G L A ++ E PN +T++ LI G+ G E +L E M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 329 RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE 388
+ +++PD +T+N LI GL K G+ ++ +L++ + PN T+ ++ G + +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 389 RAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
A ++ M S G P+ ++ ++ C+ + VLR M++ P +
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKT 377
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
+G+ N LI G C G L AL++ + PNV+TF+ LI GFC +GK E
Sbjct: 196 LGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEE 255
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
A+++ M+ + P+T+T+N LI+G + G E G+ L E M +P+ TY ++
Sbjct: 256 AFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLY 315
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
GL + +A ++ ++ + P+ ++ ++ G C + + R M + G+ P
Sbjct: 316 GLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Query: 405 NESTFGMLIS-VFCKNED 421
+ ++ V KN D
Sbjct: 376 KTLMWWKVVQCVVSKNND 393
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%)
Query: 280 GKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTY 339
G+++ A + M P++ ++N ++N + ++F + V+ D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 340 NALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTS 399
N LI GLC+ G + A L+ E + PN TFS LI G C + E AF++ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 400 IGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL 459
P+ TF +LIS K + + +L M + P+ G + GL R
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 460 ALELCSEMEAKRLLPEGFGQEKIAI 484
A E+ S+M + + P +K+ +
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVL 350
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 154/318 (48%), Gaps = 14/318 (4%)
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRAL-ETLEKMK 223
NA +S L +R + A Y M + + P+ T ++I K+G + + E EKM
Sbjct: 277 NAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMS 336
Query: 224 DMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLH 283
+ G+ + F L+ +C++GL AL +++ M + N + +NTL++ + K +
Sbjct: 337 EKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIE 396
Query: 284 EAYRVFSEMKVANVAPNTVTYNTLINGYS---QIGNCETGMRLFEEMGRNQVKPDILTYN 340
E +F+EM+ + P+ TYN L++ Y+ Q ET +R E++G ++P++ +Y
Sbjct: 397 EVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLG---LEPNVKSYT 453
Query: 341 ALILGLCKDGKTKK----AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRS 396
LI G+TKK AA+ + K L P++ +++ALI V E+A+ +
Sbjct: 454 CLISAY---GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 397 MTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
M G P+ T+ ++ F ++ D +++ + ML + + L +G ++ G
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Query: 457 KRLALELCSEMEAKRLLP 474
A ++ SE L P
Sbjct: 571 YIEARDVVSEFSKMGLQP 588
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 139/294 (47%), Gaps = 1/294 (0%)
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
S+ +V++ + Y N + + F M++ G P+ + N + + + + ++
Sbjct: 377 SNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETL 436
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPR-ALETLEKMKDMGLSPTVVSFNALISGYC 242
REM + PNV + +I AY ++ + A + +MK +GL P+ S+ ALI Y
Sbjct: 437 LREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYS 496
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
G A M + P+V T+ ++++ F + G + ++ M + +
Sbjct: 497 VSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRI 556
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
TYNTL++G+++ G + E + ++P ++TYN L+ + G+ K L+KE+
Sbjct: 557 TYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM 616
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
NL P++ T+S +I + +RAF ++ M G P+ ++ L ++
Sbjct: 617 AALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAIL 670
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 3/315 (0%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
VF + K++ + +A M++ G N + + + E + EM
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM 405
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETL-EKMKDMGLSPTVVSFNALISGYC-NKG 245
R + P+ T N+++ AY + P +ETL +M+D+GL P V S+ LIS Y K
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQ-PDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKK 464
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
+ +A M + P+ ++ LI+ + G +AY F EM + P+ TY
Sbjct: 465 MSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYT 524
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
++++ + + G+ M +++ M R ++K +TYN L+ G K G +A ++V E K
Sbjct: 525 SVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKM 584
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
L P+ T++ L+ + Q+ + M ++ P+ T+ +I F + DF A
Sbjct: 585 GLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRA 644
Query: 426 VQVLRDMLDRSMTPD 440
+ M+ PD
Sbjct: 645 FFYHKMMVKSGQVPD 659
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 188/461 (40%), Gaps = 28/461 (6%)
Query: 57 LEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASS------SNT 110
L F+ W+ PS + + S+L L R A IL + N+ N
Sbjct: 222 LYFYEWMSLQEPSLASPRACSVLFTLLGRER---MADYILLLLSNLPDKEEFRDVRLYNA 278
Query: 111 LFDALLCSYRLCDSSPLVFDAVFK--TYAN-------LNKLRDATHT-------FLRMKE 154
L S R D+ V++A+ K Y + + LR A + F +M E
Sbjct: 279 AISGLSASQRYDDAWE-VYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSE 337
Query: 155 YGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPR 214
G + + + S E AL EM + I N N ++ AY KS +
Sbjct: 338 KGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEE 397
Query: 215 ALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLIN 274
+M+D GL P+ ++N L+ Y + + + M + + PNV ++ LI+
Sbjct: 398 VEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLIS 457
Query: 275 GFCKEGKLHE-AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVK 333
+ + K+ + A F MK + P++ +Y LI+ YS G E FEEM + +K
Sbjct: 458 AYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIK 517
Query: 334 PDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQI 393
P + TY +++ + G T K + K + ++ + T++ L+ G + A +
Sbjct: 518 PSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDV 577
Query: 394 YRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSR 453
+ +G P+ T+ ML++ + + Q+L++M ++ PDS S + R
Sbjct: 578 VSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVR 637
Query: 454 CGRKRLALELCSEMEAKRLLPEGFGQEKI-AITSPENGTNN 493
+ A M +P+ EK+ AI + T N
Sbjct: 638 VRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKN 678
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 181/419 (43%), Gaps = 21/419 (5%)
Query: 59 FFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCS 118
FF W ++ H+ T++ ++ L R F ++ + N N S TL D +
Sbjct: 152 FFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEM-NKNEESKLVTL-DTM--- 206
Query: 119 YRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRM-KEYGFLPTLESCNAFLSSLLQLRRA 177
V + A K A FL M K YG + N+ + +L++
Sbjct: 207 -----------SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSI 255
Query: 178 EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
E A + ++ D I P+ T N++I +CK+ A ++ MK +P VV++ +
Sbjct: 256 EHAHEVFLKLF-DTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSF 314
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
+ YC +G +M M +PNVVT+ +++ K ++ EA V+ +MK
Sbjct: 315 VEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGC 374
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
P+ Y++LI+ S+ G + +FE+M V+ D+L YN +I + + A
Sbjct: 375 VPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALR 434
Query: 358 LVKELDK---DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
L+K ++ ++ PN T++ L+ C + + + M S + ST+ +LI
Sbjct: 435 LLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIR 494
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
C + + A + + + M P L + L + L++ S +++K ++
Sbjct: 495 GLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQSKTMI 553
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
Query: 268 TFNTLIN--GFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL---INGYSQIGNCETGMR 322
T+N +++ G C+ L + + +EM N VT +T+ + ++ G +
Sbjct: 168 TYNAMVDVLGKCRNFDL--MWELVNEMN-KNEESKLVTLDTMSKVMRRLAKSGKYNKAVD 224
Query: 323 LFEEMGRNQ-VKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQ 381
F EM ++ VK D + N+L+ L K+ + A + +L D + P+A TF+ LI G
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGF 283
Query: 382 CVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
C + A + M ++P+ T+ + +CK DF ++L +M + P+
Sbjct: 284 CKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNV 343
Query: 442 GILSALYNGLSRCGRKRLALELCSEMEAKRLLPEG 476
+ + + L + + AL + +M+ +P+
Sbjct: 344 VTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDA 378
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 167/361 (46%), Gaps = 14/361 (3%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRM-KEYGFLPTLESCNAFLSSLLQLRRAEVA 180
CD L+F+ + K+ +K F M K+ ++P + +S + + + +A
Sbjct: 97 CDHCFLLFEELGKS----DKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMA 152
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET----LEKMKDMG-LSPTVVSFN 235
+ + EM+ P+ N +I A+ + D +ALE L+KMK + P VV++N
Sbjct: 153 MWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYN 212
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
L+ + G + + + VSP+V TFN +++ + K G + E V + M+
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN 272
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
P+ +T+N LI+ Y + E + F+ + R++ KP + T+N++I+ K KA
Sbjct: 273 ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
Query: 356 ANLVKELDKDNLVPNASTFSALIT--GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
+ K+++ N +P+ T+ +I G C + RA +I+ + ST ++
Sbjct: 333 EWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAML 390
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
V+C+N + A ++ + + PD+ LY ++ K L +ME ++
Sbjct: 391 EVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIV 450
Query: 474 P 474
P
Sbjct: 451 P 451
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 2/259 (0%)
Query: 159 PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET 218
P + + N L + Q + + A ++++ +SP+VYT N V+ AY K+G +
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLL-GLALKMKSLMGNYRVSPNVVTFNTLINGFC 277
L +M+ P +++FN LI Y K + KSLM + + P + TFN++I +
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS-KEKPTLPTFNSMIINYG 324
Query: 278 KEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDIL 337
K + +A VF +M N P+ +TY +I Y G+ +FEE+G +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 338 TYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
T NA++ C++G +A L + P+AST+ L + E+ + + M
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
Query: 398 TSIGYSPNESTFGMLISVF 416
G PN+ F + VF
Sbjct: 445 EKDGIVPNKRFFLEALEVF 463
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 167/361 (46%), Gaps = 14/361 (3%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRM-KEYGFLPTLESCNAFLSSLLQLRRAEVA 180
CD L+F+ + K+ +K F M K+ ++P + +S + + + +A
Sbjct: 97 CDHCFLLFEELGKS----DKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMA 152
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET----LEKMKDMG-LSPTVVSFN 235
+ + EM+ P+ N +I A+ + D +ALE L+KMK + P VV++N
Sbjct: 153 MWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYN 212
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
L+ + G + + + VSP+V TFN +++ + K G + E V + M+
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN 272
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
P+ +T+N LI+ Y + E + F+ + R++ KP + T+N++I+ K KA
Sbjct: 273 ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
Query: 356 ANLVKELDKDNLVPNASTFSALIT--GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
+ K+++ N +P+ T+ +I G C + RA +I+ + ST ++
Sbjct: 333 EWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAML 390
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
V+C+N + A ++ + + PD+ LY ++ K L +ME ++
Sbjct: 391 EVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIV 450
Query: 474 P 474
P
Sbjct: 451 P 451
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 2/259 (0%)
Query: 159 PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET 218
P + + N L + Q + + A ++++ +SP+VYT N V+ AY K+G +
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLL-GLALKMKSLMGNYRVSPNVVTFNTLINGFC 277
L +M+ P +++FN LI Y K + KSLM + + P + TFN++I +
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS-KEKPTLPTFNSMIINYG 324
Query: 278 KEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDIL 337
K + +A VF +M N P+ +TY +I Y G+ +FEE+G +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 338 TYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
T NA++ C++G +A L + P+AST+ L + E+ + + M
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
Query: 398 TSIGYSPNESTFGMLISVF 416
G PN+ F + VF
Sbjct: 445 EKDGIVPNKRFFLEALEVF 463
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 35/423 (8%)
Query: 18 AHSHLIHSQWENLHPLS---------TSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNP 68
A +H+++ +HP TS FRV + ND SL FFNW + NP
Sbjct: 50 AINHVVNIVRREIHPERSLNSLRLPVTSEFVFRVLRATSRSSND---SLRFFNWARS-NP 105
Query: 69 S-SHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPL 127
S + T + L +LA+++K+++ IL+++ ++++ S TL C
Sbjct: 106 SYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETL----------C----- 150
Query: 128 VFDAVFKTYANLNKLRDATHTFLRM-KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ + Y + A F + K G T++ N+ L +L ++ A A R
Sbjct: 151 ---FIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M R + P+ T +++ +C +G + A E L++M G +P + LI G N G
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L A +M S M P++ TFN LI K G++ ++ + + TY T
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKT 327
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
LI S+IG + RL + KP Y +I G+C++G A + ++
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 367 LVPNASTFSALITGQCVRNNS-ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
PN ++ LIT C R A MT +G P F M+ D A
Sbjct: 388 HPPNRPVYTMLIT-MCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLA 446
Query: 426 VQV 428
+++
Sbjct: 447 MRI 449
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 36/343 (10%)
Query: 157 FLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRAL 216
+ PT SL ++ E ++M+ + + TL +I Y K+G + +A+
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 217 ETLEKM-KDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLING 275
E + K +G TV +N+L+ C+ + A + M + P+ T+ L+NG
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 276 FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
+C GK+ EA EM P + LI G G E+ + +M + PD
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Query: 336 ILTYNALI---------------------LGLCKD--------------GKTKKAANLVK 360
I T+N LI LGLC D GK +A L+
Sbjct: 287 IQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLN 346
Query: 361 ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
+D P S ++ +I G C + AF + M + PN + MLI++ +
Sbjct: 347 NCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGG 406
Query: 421 DFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
F A L +M + + P S + +GL G+ LA+ +
Sbjct: 407 KFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 176/450 (39%), Gaps = 63/450 (14%)
Query: 34 STSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTH----SILLHTLANNRKF 89
S LT V IL +L+ ++ + FF W + SH + IL T N++F
Sbjct: 120 SVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQF 179
Query: 90 KTAHSILRRIINVNVASSSNTLFDALLCSYR-LCDSSPLVFDAVFKTYANLNKLRDATHT 148
+ +L + N + L D LL R C+ + + +A ++R T
Sbjct: 180 RIVIDMLDYMKRNN---KTVVLVDVLLEILRKYCER----YLTHVQKFAKRKRIRVKTQ- 231
Query: 149 FLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK 208
P + + N L +L + + A R MR + P+ T N++ +C+
Sbjct: 232 ----------PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCR 280
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM---GNYRVSPN 265
D +A++ LE+M + G P ++ A I +C G++ A + M G+ +P
Sbjct: 281 VRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT 340
Query: 266 VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE 325
TF +I K K E + + M P+ TY +I G + + +
Sbjct: 341 AKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLD 400
Query: 326 EMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRN 385
EM PDI+TYN + LC++ KT +A L + + P+ T++
Sbjct: 401 EMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYN---------- 450
Query: 386 NSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILS 445
MLIS+F + +D DGA +M R D
Sbjct: 451 -------------------------MLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYC 485
Query: 446 ALYNGLSRCGRKRLALELCSEMEAKRL-LP 474
A+ NGL C R + A L E+ K L LP
Sbjct: 486 AMINGLFDCHRAKEACFLLEEVVNKGLKLP 515
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
P +N L++ + G + G L M R++VKPD T+N L G C+ KKA L
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 359 VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYS---PNESTFGMLISV 415
++E+ + P T+ A I C + A ++ M + G + P TF ++I
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 416 FCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
KN+ + +++ M+ PD + G+ + A + EM K P+
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%)
Query: 159 PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET 218
PT ++ + +L + +AE M P+V T VI C + + A +
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
L++M + G P +V++N + C ALK+ M R +P+V T+N LI+ F +
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFE 458
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
A+ ++EM + + TY +ING + L EE+ +K
Sbjct: 459 MDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRV 518
Query: 339 YNALILGLCKDGKTKKAANLVKELDK 364
+++ ++ L + G K + + + K
Sbjct: 519 FDSFLMRLSEVGNLKAIHKVSEHMKK 544
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 162/361 (44%), Gaps = 18/361 (4%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
Y+ KL + F MK+ L S N+ LSS +L + A+ EM + P+
Sbjct: 134 YSRNGKLELSRKVFNSMKD----RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD 189
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
+ T N ++ Y G A+ L++M+ GL P+ S ++L+ G L L +
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHG 249
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
+ ++ +V TLI+ + K G L A VF M A N V +N+L++G S
Sbjct: 250 YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD----AKNIVAWNSLVSGLSYAC 305
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
+ L M + +KPD +T+N+L G GK +KA +++ ++ + + PN +++
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
A+ +G N A +++ M G PN +T L+ + +V L +
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK 425
Query: 436 SMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE----------GFGQEKIAIT 485
++ D+ + +AL + + G + A+E+ ++ K L G G+E IA
Sbjct: 426 NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 486 S 486
S
Sbjct: 486 S 486
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 123/285 (43%), Gaps = 62/285 (21%)
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKM------------KSLMGNYR----------- 261
+GL V N+LI Y G L L+ K+ S++ +Y
Sbjct: 118 LGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGL 177
Query: 262 --------VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
+ P++VT+N+L++G+ +G +A V M++A + P+T + ++L+ ++
Sbjct: 178 LDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE 237
Query: 314 IGNCETGMRLFEEMGRNQVKPD-------------------------------ILTYNAL 342
G+ + G + + RNQ+ D I+ +N+L
Sbjct: 238 PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 297
Query: 343 ILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
+ GL K A L+ ++K+ + P+A T+++L +G E+A + M G
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
Query: 403 SPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
+PN ++ + S KN +F A++V M + + P++ +S L
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTL 402
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 133/328 (40%), Gaps = 81/328 (24%)
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
A A M ++ I P+ T N + Y G +AL+ + KMK+ G++P VVS+ A+ S
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTL---------------INGFC------- 277
G G ALK+ M V PN T +TL ++GFC
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429
Query: 278 -------------KEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF 324
K G L A +F +K ++A ++N ++ GY+ G E G+ F
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRGEEGIAAF 485
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
M ++PD +T+ + +L +CK+ + LV+E
Sbjct: 486 SVMLEAGMEPDAITFTS-VLSVCKN------SGLVQE----------------------- 515
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGIL 444
+ F + RS G P ++ + ++ D A ++ M S+ PD+ I
Sbjct: 516 --GWKYFDLMRS--RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM---SLKPDATIW 568
Query: 445 SALYNGLSRCGRKRLALELCSEMEAKRL 472
A LS C R LEL +E+ KRL
Sbjct: 569 GAF---LSSCKIHR-DLEL-AEIAWKRL 591
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 17/225 (7%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
+ A+F + R+A F++M+E G P A +S+LL++ L +E+
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPN----AATMSTLLKILGCLSLLHSGKEVH 419
Query: 189 RDCISPNV----YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
C+ N+ Y ++ Y KSGDL A+E +K+ L+ S+N ++ GY
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMF 475
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA-NVAPNTVT 303
G + S+M + P+ +TF ++++ G + E ++ F M+ + P
Sbjct: 476 GRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEH 535
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
+ +++ + G + + M +KPD + A L CK
Sbjct: 536 CSCMVDLLGRSGYLDEAWDFIQTM---SLKPDATIWGAF-LSSCK 576
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 161/398 (40%), Gaps = 40/398 (10%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVAL 181
C P +++V K N + D ++E F+P +++ ++ L + + A
Sbjct: 508 CTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAF 567
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
A M + P V + +I + K G + A ET KM + G+ P +++ +I+ Y
Sbjct: 568 AIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTY 627
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
G + A ++ + + + P+ T+ LI+GF K G + + + +M ++PN
Sbjct: 628 ARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNV 687
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
V Y LI + + G+ + LF MG N +K D + Y L+ GL + KK ++ E
Sbjct: 688 VLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVE 747
Query: 362 LDKDNL-------------------------------------VPNASTFSALITGQCVR 384
K+ L +PN + +ITG C
Sbjct: 748 PGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAA 807
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGIL 444
+ A+ SM G PN T+ +L+ + D + A+ + + PD +
Sbjct: 808 GRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGT---NCEPDQVMY 864
Query: 445 SALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQEKI 482
S L GL R AL L EM+ + P EK+
Sbjct: 865 STLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKL 902
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 140/336 (41%), Gaps = 40/336 (11%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ + + TYA ++ +A + ++ P+ + +S +++ E + +
Sbjct: 618 IAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDK 677
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC---- 242
M D +SPNV +I + K GD + M + + +++ L+SG
Sbjct: 678 MLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMA 737
Query: 243 ------------NKGLLGLALKMKSL------MGNY---------------RVSPNVVTF 269
+ LL ++ K L +GNY + PN+
Sbjct: 738 RKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLH 797
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
NT+I G+C G+L EAY M+ + PN VTY L+ + + G+ E+ + LFE G
Sbjct: 798 NTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE--GT 855
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
N +PD + Y+ L+ GLC + A L+ E+ K + PN ++ L+ C +
Sbjct: 856 N-CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTME 914
Query: 390 AFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
A ++ + M ++ P LI + C+ + A
Sbjct: 915 AVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREA 950
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 147/351 (41%), Gaps = 40/351 (11%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
++ ++ + ++ +A TF +M E G P + +++ + R + A E+
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV 643
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
+ + P+ +T ++I + K G + + + L+KM + GLSP VV + ALI + KG
Sbjct: 644 VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF 703
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE---------------- 291
+ + LMG + + + + TL++G + + +V E
Sbjct: 704 KFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPL 763
Query: 292 ----------------MKV-----ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN 330
M+V ++ PN +NT+I GY G + E M +
Sbjct: 764 VSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKE 823
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
+ P+++TY L+ + G + A +L + N P+ +S L+ G C A
Sbjct: 824 GIVPNLVTYTILMKSHIEAGDIESAIDL---FEGTNCEPDQVMYSTLLKGLCDFKRPLDA 880
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
+ M G +PN+ ++ L+ C + AV+V++DM + P S
Sbjct: 881 LALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRS 931
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 4/279 (1%)
Query: 199 LNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMG 258
L +V A C + AL +EKM ++G +P S+N++I + ++ + +++
Sbjct: 480 LAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQ 539
Query: 259 NYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCE 318
P+V T+ ++N CK+ A+ + M+ + P Y+++I + G
Sbjct: 540 ELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVV 599
Query: 319 TGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALI 378
F +M + ++PD + Y +I ++G+ +A LV+E+ K L P++ T++ LI
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 379 TGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMT 438
+G E+ Q M G SPN + LI F K DF + + M + +
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 439 PDS----GILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
D +LS L+ ++R ++++ +E E +RL+
Sbjct: 720 HDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLI 758
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 149/363 (41%), Gaps = 27/363 (7%)
Query: 68 PSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPL 127
P S L + ++ L R+F A + L RII A S N SS L
Sbjct: 129 PDSSVLDS---MVFCLVKLRRFDEARAHLDRIIASGYAPSRN--------------SSSL 171
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL---QLRRAEVALAFY 184
V D + N ++ +A H F ++KE G L C L L A L
Sbjct: 172 VVDEL----CNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTL 227
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
M R + N+Y ++ C +CK G A + M+ G V + L+ YC
Sbjct: 228 CGMTRMPLPVNLYK-SLFYC-FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKD 285
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
+ +A+++ M + FNTLI+GF K G L + +FS+M V N TY
Sbjct: 286 NNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTY 345
Query: 305 NTLINGYSQIGNCETGMRLF-EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
+ +I Y + GN + +RLF G + ++ Y LI G K G KA +L+ +
Sbjct: 346 HIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRML 405
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
+ +VP+ T+ L+ + + A I +S+ G N L ++ K E
Sbjct: 406 DNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLL 465
Query: 424 GAV 426
G +
Sbjct: 466 GEI 468
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 164/407 (40%), Gaps = 40/407 (9%)
Query: 105 ASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESC 164
A+ + LFD + D +++ + K Y N + A +LRM E F L+ C
Sbjct: 253 AAEAEALFDHMEVDGYYVDK--VMYTCLMKEYCKDNNMTMAMRLYLRMVERSF--ELDPC 308
Query: 165 --NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET-LEK 221
N + ++L + + +M + + NV+T +++I +YCK G++ AL +
Sbjct: 309 IFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNN 368
Query: 222 MKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGK 281
+S V + LI G+ KG + A+ + M + + P+ +T+ L+ K +
Sbjct: 369 TGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHE 428
Query: 282 LHEAYRVFS--------------------EMKV-----------ANVAPNTVTYNTLING 310
L A + E+KV AN+A V +
Sbjct: 429 LKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLA--AVGLAVVTTA 486
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
N + E+M P +YN++I L ++ + A+LV + + + VP+
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPD 546
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
T+ ++ C +N+ + AF I +M +G P + + +I K A +
Sbjct: 547 VDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFA 606
Query: 431 DMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
ML+ + PD + N +R GR A EL E+ L P F
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSF 653
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 107/229 (46%)
Query: 169 SSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLS 228
++L R AL+ +M +P ++ N VI + + + ++++
Sbjct: 485 TALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFV 544
Query: 229 PTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRV 288
P V ++ +++ C K A + M + P V ++++I K+G++ EA
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 289 FSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
F++M + + P+ + Y +IN Y++ G + L EE+ ++ ++P TY LI G K
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 349 DGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
G +K + ++ +D L PN ++ALI + + + +F ++ M
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLM 713
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 4/189 (2%)
Query: 215 ALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLIN 274
A+E + K+K + P + N +I+GYC G L A M + PN+VT+ L+
Sbjct: 779 AMEVIGKVKK-SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 275 GFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKP 334
+ G + A +F N P+ V Y+TL+ G + L EM ++ + P
Sbjct: 838 SHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 335 DILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIY 394
+ +Y L+ LC T +A +VK++ ++ P + + LI C A ++
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954
Query: 395 RSMTSIGYS 403
M G S
Sbjct: 955 AIMVQSGRS 963
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 138/357 (38%), Gaps = 46/357 (12%)
Query: 79 LLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPL---VFDAVFKT 135
L+ L +A ++RR+I+ SS+ AL+ + + + L + A+ +
Sbjct: 49 LIVKLGRRGLLDSAREVIRRVID----GSSSISEAALVADFAVDNGIELDSSCYGALIRK 104
Query: 136 YANLNKLRDATHTFL--RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCIS 193
+ + TF R+ G +P ++ + L++LRR + A A + +
Sbjct: 105 LTEMGQ-PGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYA 163
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
P+ + ++V+ C A E++K+ G + L G C G L A+ M
Sbjct: 164 PSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGM 223
Query: 254 -KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
+L G R+ V + +L FCK G EA +F M+V + V Y L+ Y
Sbjct: 224 LDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYC 283
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
+ N MRL+ M + D +N LI G K G LDK +
Sbjct: 284 KDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGM----------LDKGRV----- 328
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
++ M G N T+ ++I +CK + D A+++
Sbjct: 329 --------------------MFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF 365
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 189/447 (42%), Gaps = 56/447 (12%)
Query: 42 VKHILLKLKNDDVLSLEFFNWVHNCNPS-SHTLQTHSILLHTLANNRKFKTAHSILRRII 100
V IL + D L+FF W ++ P H+ +S + T+ +L +
Sbjct: 60 VLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMK 119
Query: 101 NVNV---ASSSNTLFDALLCSYRLCDS--------------SPLVFDAVFKTYANLNKLR 143
V + + L D+L+ S + + +P V+D+V ++LR
Sbjct: 120 EDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELR 179
Query: 144 DATHTFLRMKE---------------YGFLPTLESCNAFLSSLLQLRRAEVALAFYR--- 185
A ++ E +LP + N L + LRRA++ F R
Sbjct: 180 LALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELL---VGLRRADMRSEFKRVFE 236
Query: 186 ---EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMG------LSPTVVSFNA 236
M+R + ++ N+ I + GDL AL ++MK+ P + ++N+
Sbjct: 237 KLKGMKR--FKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNS 294
Query: 237 LISGYCNKGLLGLALKMKSLMGNYRVS---PNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
LI C L G A + +VS P+ T+ LI G CK ++ +A R++ EM+
Sbjct: 295 LIHVLC---LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQ 351
Query: 294 VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTK 353
P+T+ YN L++G + +LFE+M + V+ TYN LI GL ++G+ +
Sbjct: 352 YNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAE 411
Query: 354 KAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLI 413
L +L K +A TFS + C E A ++ M + G+S + T L+
Sbjct: 412 AGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPD 440
F K +D ++++ + + ++ P+
Sbjct: 472 IGFHKQGRWDWKEKLMKHIREGNLVPN 498
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 137/302 (45%), Gaps = 16/302 (5%)
Query: 133 FKTYANLNKLRDATHTFLRMKE----YG--FLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
F + +L+ A F MKE YG F P + + N+ + L +A+ AL + E
Sbjct: 258 FGCWGDLDA---ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDE 314
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
++ P+ T ++I CKS + A+ +M+ G P + +N L+ G
Sbjct: 315 LKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARK 374
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ A ++ M V + T+N LI+G + G+ + +F ++K + +T++
Sbjct: 375 VTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSI 434
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
+ + G E ++L EEM D++T ++L++G K G+ L+K + + N
Sbjct: 435 VGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGN 494
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
LVPN ++A + R S+ + Y M P++ +F ++S+ +D A
Sbjct: 495 LVPNVLRWNAGVEASLKRPQSKD--KDYTPMF-----PSKGSFLDIMSMVGSEDDGASAE 547
Query: 427 QV 428
+V
Sbjct: 548 EV 549
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Query: 193 SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSP-TVVSFNALISGYCNKGLLGLAL 251
S +V +N + Y GDL A + E MG++ T ++N+++S + KG A
Sbjct: 591 SFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTAR 650
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
+ M + ++ T+N +I G K G+ A V + + V YNTLIN
Sbjct: 651 GVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINAL 710
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
+ + +LF+ M N + PD+++YN +I K GK K+A +K + +PN
Sbjct: 711 GKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNH 770
Query: 372 STFSAL 377
T + L
Sbjct: 771 VTDTIL 776
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 4/200 (2%)
Query: 213 PRALETLEKMKDMGLSPT---VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSP-NVVT 268
P+ L L + + + P V N +S Y +KG L LA K+ + V+ T
Sbjct: 573 PKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYT 632
Query: 269 FNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMG 328
+N++++ F K+G A V +M A + TYN +I G ++G + + + +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 329 RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE 388
+ DI+ YN LI L K + +A L + + + P+ +++ +I +
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 389 RAFQIYRSMTSIGYSPNEST 408
A++ ++M G PN T
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT 772
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 5/181 (2%)
Query: 263 SPNVVTFNTLINGFCKEGKLHEA---YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
S +V NT ++ + +G L A + +F+ M V ++ + TYN++++ + + G +T
Sbjct: 591 SFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDL--TSYTYNSMMSSFVKKGYFQT 648
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
+ ++M N DI TYN +I GL K G+ A+ ++ L K + ++ LI
Sbjct: 649 ARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLIN 708
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
+ A Q++ M S G +P+ ++ +I V K A + L+ MLD P
Sbjct: 709 ALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLP 768
Query: 440 D 440
+
Sbjct: 769 N 769
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 142/364 (39%), Gaps = 62/364 (17%)
Query: 141 KLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLN 200
++ DA + M+ GF+P N L L+ R+ A + +M ++ + + +T N
Sbjct: 339 RMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYN 398
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++I ++G +K G ++F+ + C +G L A+K+ M
Sbjct: 399 ILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETR 458
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN--------------- 305
S ++VT ++L+ GF K+G+ ++ ++ N+ PN + +N
Sbjct: 459 GFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDK 518
Query: 306 ----------TLINGYSQIGNCETGMRLFEEMG-------------------RNQVKPDI 336
+ ++ S +G+ + G EE+ RNQ KP
Sbjct: 519 DYTPMFPSKGSFLDIMSMVGSEDDGASA-EEVSPMEDDPWSSSPYMDQLAHQRNQPKP-- 575
Query: 337 LTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRS 396
+ GL + + + + D D + +TF ++ + + + + F+I+
Sbjct: 576 ------LFGLARGQRVEAKPD---SFDVDMM----NTFLSIYLSKGDLSLACKLFEIFNG 622
Query: 397 MTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
M + T+ ++S F K F A VL M + D + + GL + GR
Sbjct: 623 MGVTDLT--SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGR 680
Query: 457 KRLA 460
LA
Sbjct: 681 ADLA 684
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
N+ +SS ++ + A +M + + ++ T N++I K G A L+++
Sbjct: 634 NSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTK 693
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
G +V +N LI+ L A ++ M + ++P+VV++NT+I K GKL E
Sbjct: 694 QGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKE 753
Query: 285 AYRVFSEMKVANVAPNTVTYNTL 307
AY+ M A PN VT L
Sbjct: 754 AYKYLKAMLDAGCLPNHVTDTIL 776
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 154/383 (40%), Gaps = 61/383 (15%)
Query: 54 VLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFD 113
+ +LEF+ + H+ + +L+ L NRKF +L + +L
Sbjct: 89 IQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELL-----IETKRKDRSLI- 142
Query: 114 ALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEY--GFLPTLESC-NAFLSS 170
SP V A L +R +F + K F T +C NA L +
Sbjct: 143 -----------SPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDT--ACFNALLRT 189
Query: 171 LLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT 230
L Q + A Y ++ P
Sbjct: 190 LCQEKSMTDARNVYHSLKHQ------------------------------------FQPD 213
Query: 231 VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS 290
+ +FN L+SG+ A M + P+VVT+N+LI+ +CK+ ++ +AY++
Sbjct: 214 LQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLID 270
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
+M+ P+ +TY T+I G IG + + +EM PD+ YNA I C
Sbjct: 271 KMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIAR 330
Query: 351 KTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFG 410
+ A LV E+ K L PNA+T++ + N+ R++++Y M PN +
Sbjct: 331 RLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCM 390
Query: 411 MLISVFCKNEDFDGAVQVLRDML 433
LI +F ++E D A+++ DM+
Sbjct: 391 FLIKMFKRHEKVDMAMRLWEDMV 413
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 83/136 (61%)
Query: 229 PTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRV 288
PT +++N++I G+C + + A +M M + SP+VVTF+TLING+CK ++ +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 289 FSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
F EM + NTVTY TLI+G+ Q+G+ + L EM V PD +T++ ++ GLC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 349 DGKTKKAANLVKELDK 364
+ +KA ++++L K
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 78/141 (55%)
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M + + P +T+N++I+GFCK+ ++ +A R+ M +P+ VT++TLINGY +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+ GM +F EM R + + +TY LI G C+ G A +L+ E+ + P+ TF
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 377 LITGQCVRNNSERAFQIYRSM 397
++ G C + +AF I +
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%)
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M R I P T N +I +CK + A L+ M G SP VV+F+ LI+GYC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
+ +++ M + N VT+ TLI+GFC+ G L A + +EM VAP+ +T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQ 331
++ G + E++ +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSE 145
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 70/137 (51%)
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
++ P T+TYN++I+G+ + + R+ + M PD++T++ LI G CK +
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV 415
+ E+ + +V N T++ LI G C + + A + M S G +P+ TF +++
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 416 FCKNEDFDGAVQVLRDM 432
C ++ A +L D+
Sbjct: 125 LCSKKELRKAFAILEDL 141
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
M R + P +TYN++I G CK + A ++ + P+ TFS LI G C
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
+ +I+ M G N T+ LI FC+ D D A +L +M+ + PD
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 447 LYNGLSRCGRKRL 459
+ GL C +K L
Sbjct: 121 MLAGL--CSKKEL 131
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 69/142 (48%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD 211
M + PT + N+ + + R + A M SP+V T + +I YCK+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
+ +E +M G+ V++ LI G+C G L A + + M + V+P+ +TF+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 272 LINGFCKEGKLHEAYRVFSEMK 293
++ G C + +L +A+ + +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 60/120 (50%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
+ + ++++ + +++ DA M G P + + + ++ + +R + + +
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
EM R I N T +I +C+ GDL A + L +M G++P ++F+ +++G C+K
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%)
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
++ P T++++I G C ++ + A ++ SM S G SP+ TF LI+ +CK + D
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+++ +M R + ++ + L +G + G A +L +EM + + P+
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 114
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 172/388 (44%), Gaps = 27/388 (6%)
Query: 75 THSILLHTLANNR-KFKTAHSILRRIINVNVASSSNTLFDALL---CSYRLCDSSPLVFD 130
T ++L + NR +K A+ + + ++ +V SS+ L++ +L R + VFD
Sbjct: 108 TEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFD 167
Query: 131 AVFKT---------------YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLR 175
+ K YA +K+ +A F R KE+G L + + L L + +
Sbjct: 168 EMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYK 227
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFN 235
E A + RR+ ++ +NM++ +C G++ A + + P VVS+
Sbjct: 228 HVEFAETLFCSRRRE-FGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYG 286
Query: 236 ALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
+I+ KG LG A+++ M + R +P+V N +I+ C + ++ EA VF E+
Sbjct: 287 TMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEK 346
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEM--GRNQVKPDILTYNALILGLCKDGKTK 353
PN VTYN+L+ +I E L EEM P+ +T++ L+ K +
Sbjct: 347 GPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL----KYSQRS 402
Query: 354 KAANLVKELDKDNLVPNASTFSALITGQCVR-NNSERAFQIYRSMTSIGYSPNESTFGML 412
K ++V E N S L+ V+ + E+ +I+ M G P++ T+ +
Sbjct: 403 KDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIR 462
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
I A+ ++M+ + M P+
Sbjct: 463 IHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 147/319 (46%), Gaps = 18/319 (5%)
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
N L L ++RR E + EM + N T +++ Y + + A+ E+ K+
Sbjct: 147 NEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKE 206
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYR--VSPNVVTFNTLINGFCKEGKL 282
G+ +V+F+ L+ C + A ++L + R ++ N ++NG+C G +
Sbjct: 207 FGIDDDLVAFHGLLMWLCRYKHVEFA---ETLFCSRRREFGCDIKAMNMILNGWCVLGNV 263
Query: 283 HEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL 342
HEA R + ++ + P+ V+Y T+IN ++ G M L+ M + PD+ N +
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 343 ILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
I LC + +A + +E+ + PN T+++L+ C +E+ +++ M G
Sbjct: 324 IDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGG 383
Query: 403 --SPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSR----CGR 456
SPN+ TF L+ +++D D +L+R + S LYN + R +
Sbjct: 384 SCSPNDVTFSYLLKYSQRSKDVDI-------VLERMAKNKCEMTSDLYNLMFRLYVQWDK 436
Query: 457 KRLALELCSEMEAKRLLPE 475
+ E+ SEME L P+
Sbjct: 437 EEKVREIWSEMERSGLGPD 455
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 5/204 (2%)
Query: 269 FNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMG 328
+N +++ K + E ++VF EM + N TY L+N Y+ + + +FE
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 329 RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE 388
+ D++ ++ L++ LC+ + A L ++ + + ++ G CV N
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE-FGCDIKAMNMILNGWCVLGNVH 264
Query: 389 RAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALY 448
A + ++ + + P+ ++G +I+ K A+++ R M D PD I + +
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 449 NGLSRCGRKRL--ALELCSEMEAK 470
+ L C +KR+ ALE+ E+ K
Sbjct: 325 DAL--CFKKRIPEALEVFREISEK 346
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 182/415 (43%), Gaps = 17/415 (4%)
Query: 75 THSILLHTLANNRKFKTAHSI---LRRIINVNVASSSNTLFDALL-----CSY------R 120
T+ LL +R + A + +RR + + N L DAL C R
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKR 264
Query: 121 LCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVA 180
C + + +T + K +A F M G + N + L + + + A
Sbjct: 265 HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
+ + M PN YT ++++ G L R L+ + ++ ++ + S+ L+
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVR-LDGVVEISKRYMTQGIYSY--LVRT 381
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
G + A ++ M ++ V ++ +++ C GK EA + S++ V +
Sbjct: 382 LSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTD 441
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
T+ YNT+ + ++ LFE+M ++ PDI TYN LI + G+ +A N+ +
Sbjct: 442 TMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFE 501
Query: 361 ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
EL++ + P+ ++++LI + + A ++ M G +P+ T+ L+ F K E
Sbjct: 502 ELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTE 561
Query: 421 DFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ A + +ML + P+ + L + L + GR A++L S+M+ + L P+
Sbjct: 562 RVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPD 616
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 127/262 (48%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
++ + +T + L + +A F M + +S + L SL + A+ ++
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
+ + N V A K + + EKMK G SP + ++N LI+ + G +
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
A+ + + P+++++N+LIN K G + EA+ F EM+ + P+ VTY+TL
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
+ + + E LFEEM +P+I+TYN L+ L K+G+T +A +L ++ + L
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 368 VPNASTFSALITGQCVRNNSER 389
P++ T++ L Q V + R
Sbjct: 614 TPDSITYTVLERLQSVSHGKSR 635
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 193/457 (42%), Gaps = 27/457 (5%)
Query: 38 TPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHT---LQTHSILLHTLAN-NRKFKTAH 93
TP IL L N +L++EFF V + P S L IL+ + +N +F
Sbjct: 98 TPDEASEILKSL-NSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVR 156
Query: 94 SILRRIINVNV---ASSSNTLF-------DALLCSYRLCDSSPL-----VFDAVFKTYAN 138
SIL ++ NV S+ N L D +C RL L + + + Y
Sbjct: 157 SILDSMVKSNVHGNISTVNILIGFFGNTEDLQMC-LRLVKKWDLKMNSFTYKCLLQAYLR 215
Query: 139 LNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYT 198
A + ++ G + + N L +L + E A + +M++ + YT
Sbjct: 216 SRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALA---KDEKACQVFEDMKKRHCRRDEYT 272
Query: 199 LNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMG 258
++I + G A+ +M GL+ VV +N L+ ++ A+++ S M
Sbjct: 273 YTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMV 332
Query: 259 NYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCE 318
PN T++ L+N EG+L R+ ++++ Y+ L+ S++G+
Sbjct: 333 ETGCRPNEYTYSLLLNLLVAEGQL---VRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVS 389
Query: 319 TGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALI 378
RLF +M VK + +Y +++ LC GKT +A ++ ++ + +V + ++ +
Sbjct: 390 EAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVF 449
Query: 379 TGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMT 438
+ ++ M G SP+ T+ +LI+ F + + D A+ + ++
Sbjct: 450 SALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCK 509
Query: 439 PDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
PD ++L N L + G A EM+ K L P+
Sbjct: 510 PDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPD 546
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 1/259 (0%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM-RRDCISP 194
Y N L + TF +++Y T++S NA L + L + + A Y EM + I P
Sbjct: 121 YGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEP 180
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
++ T N +I C+SG + + +M+ + PT SF +I G+ + K+
Sbjct: 181 DLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVM 240
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
+M + V V T+N +I CK K EA + + + PN+VTY+ LI+G+
Sbjct: 241 RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSE 300
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
N + M LFE M N KPD Y LI LCK G + A L +E + N VP+ S
Sbjct: 301 ENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVM 360
Query: 375 SALITGQCVRNNSERAFQI 393
L+ G R+ + A ++
Sbjct: 361 KWLVNGLASRSKVDEAKEL 379
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 15/276 (5%)
Query: 203 ICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC-----NKGLLGLALKMKSLM 257
I Y ++ L R+++T ++ + TV S NAL+ C K + L+M +
Sbjct: 118 IILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFA-CLMAKDYKEANRVYLEMPKMY 176
Query: 258 GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY---SQI 314
G + P++ T+N +I C+ G +Y + +EM+ + P ++ +I+G+ +
Sbjct: 177 G---IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKF 233
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
MR+ +E G V + TYN +I LCK K+ +A L+ + + PN+ T+
Sbjct: 234 DEVRKVMRMMDEFG---VHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTY 290
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD 434
S LI G C N + A ++ M GY P+ + LI CK DF+ A+ + R+ ++
Sbjct: 291 SLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESME 350
Query: 435 RSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
++ P ++ L NGL+ + A EL + ++ K
Sbjct: 351 KNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 1/219 (0%)
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM-KVANVAPNTVTYNTLINGYSQIG 315
+ Y + V + N L+ EA RV+ EM K+ + P+ TYN +I + G
Sbjct: 137 LEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESG 196
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
+ + + EM R +KP ++ +I G K+ K + +++ +D+ + +T++
Sbjct: 197 STSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYN 256
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
+I C R S A + + S PN T+ +LI FC E+ D A+ + M+
Sbjct: 257 IMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCN 316
Query: 436 SMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
PDS L + L + G AL LC E K +P
Sbjct: 317 GYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVP 355
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 6/354 (1%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
S + F + Y L A + + G P + S A + S + + A A +
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM---KDMGLSPTVVSFNALISGY 241
R M+ P+ T +++ + + A E E + K L P ++ +I Y
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
G A K+ S M V + VT+N+L++ E E +++ +M+ +++ P+
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDV 321
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
V+Y LI Y + E + +FEEM V+P YN L+ G ++A + K
Sbjct: 322 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 381
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
+ +D + P+ +++ +++ ++ E A + ++ + G+ PN T+G LI + K D
Sbjct: 382 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 441
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ ++V M + + IL+ + + RC AL EME+ + P+
Sbjct: 442 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 495
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 160/372 (43%), Gaps = 41/372 (11%)
Query: 60 FNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY 119
F + + P + T+ I+L T KFK A + TL D
Sbjct: 204 FRRMQSSGPEPSAI-TYQIILKTFVEGDKFKEAEEVF------------ETLLDE----- 245
Query: 120 RLCDSSPL-----VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
SPL ++ + Y A F M G + + N+ +S +
Sbjct: 246 ---KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS--FET 300
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
EV+ Y +M+R I P+V + ++I AY ++ AL E+M D G+ PT ++
Sbjct: 301 SYKEVS-KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 359
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
N L+ + G++ A + M R+ P++ ++ T+++ + + A + F +KV
Sbjct: 360 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 419
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD--ILTYNALILGLCKDGKT 352
PN VTY TLI GY++ + E M ++E+M + +K + ILT G CK+ +
Sbjct: 420 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS 479
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
A KE++ + P+ + L++ ++ E A + +T I T ++
Sbjct: 480 --ALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA----KELTGI----RNETATII 529
Query: 413 ISVFCKNEDFDG 424
V+ ++D +G
Sbjct: 530 ARVYGSDDDEEG 541
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 6/354 (1%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
S + F + Y L A + + G P + S A + S + + A A +
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM---KDMGLSPTVVSFNALISGY 241
R M+ P+ T +++ + + A E E + K L P ++ +I Y
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
G A K+ S M V + VT+N+L++ E E +++ +M+ +++ P+
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDV 314
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
V+Y LI Y + E + +FEEM V+P YN L+ G ++A + K
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
+ +D + P+ +++ +++ ++ E A + ++ + G+ PN T+G LI + K D
Sbjct: 375 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 434
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ ++V M + + IL+ + + RC AL EME+ + P+
Sbjct: 435 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 488
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 160/372 (43%), Gaps = 41/372 (11%)
Query: 60 FNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSY 119
F + + P + T+ I+L T KFK A + TL D
Sbjct: 197 FRRMQSSGPEPSAI-TYQIILKTFVEGDKFKEAEEVF------------ETLLDE----- 238
Query: 120 RLCDSSPL-----VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
SPL ++ + Y A F M G + + N+ +S +
Sbjct: 239 ---KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS--FET 293
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
EV+ Y +M+R I P+V + ++I AY ++ AL E+M D G+ PT ++
Sbjct: 294 SYKEVS-KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 352
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
N L+ + G++ A + M R+ P++ ++ T+++ + + A + F +KV
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD--ILTYNALILGLCKDGKT 352
PN VTY TLI GY++ + E M ++E+M + +K + ILT G CK+ +
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS 472
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
A KE++ + P+ + L++ ++ E A + +T I T ++
Sbjct: 473 --ALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA----KELTGI----RNETATII 522
Query: 413 ISVFCKNEDFDG 424
V+ ++D +G
Sbjct: 523 ARVYGSDDDEEG 534
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
G P + + + SL + R + A +E+ P+ YT N ++ CK DL
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 216 LETLEKMKD-MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLIN 274
E +++M+D + P +VSF LI CN L A+ + S +GN P+ +NT++
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 275 GFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKP 334
GFC K EA V+ +MK V P+ +TYNTLI G S+ G E + M +P
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP 333
Query: 335 DILTYNALILGLCKDG 350
D TY +L+ G+C+ G
Sbjct: 334 DTATYTSLMNGMCRKG 349
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 139/291 (47%), Gaps = 24/291 (8%)
Query: 106 SSSNTLFDALLCSYRLCDSSPL---VFDAVFKTYANLNKLRDATHTF---------LRMK 153
S + +LF+++ + R+ PL ++V ++Y ++ + D F R
Sbjct: 66 SDAKSLFNSIAATSRI----PLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPG 121
Query: 154 EYGFLPTL-ESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDL 212
FL L +C A SS+ + R M + + P+ T ++ + + C++G +
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRV------LNLMVNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCN-KGLLGLALKMKSLMGNYRVSPNVVTFNT 271
A + ++++ + P ++N L+ C K L + + + ++ V P++V+F
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
LI+ C L EA + S++ A P+ YNT++ G+ + + ++++M
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 332 VKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC 382
V+PD +TYN LI GL K G+ ++A +K + P+ +T+++L+ G C
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
LM N + P+ VT + + C+ G++ EA + E+ + P+T TYN L+ +
Sbjct: 149 LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 316 NCETGMRLFEEMGRN-QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
+ +EM + VKPD++++ LI +C ++A LV +L P+ +
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD 434
+ ++ G C + A +Y+ M G P++ T+ LI K + A L+ M+D
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 435 RSMTPDSGILSALYNGLSRCG 455
PD+ ++L NG+ R G
Sbjct: 329 AGYEPDTATYTSLMNGMCRKG 349
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 3/228 (1%)
Query: 194 PNVYTLNMVICAYCKSGD--LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
P T +++ C++ D + L M + GL P V+ + + C G + A
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA-NVAPNTVTYNTLING 310
+ + P+ T+N L+ CK LH Y EM+ +V P+ V++ LI+
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
N M L ++G KPD YN ++ G C K +A + K++ ++ + P+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
T++ LI G E A ++M GY P+ +T+ L++ C+
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 10/235 (4%)
Query: 259 NYRVSPNVVTFNTLINGFCK--EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
N+R P TF L++ C+ + + +RV + M + P+ VT + + + G
Sbjct: 117 NFR--PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD-NLVPNASTFS 375
+ L +E+ PD TYN L+ LCK V E+ D ++ P+ +F+
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
LI C N A + + + G+ P+ + ++ FC AV V + M +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 436 SMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQEKIAITSPENG 490
+ PD + L GLS+ GR A M K ++ G+ + TS NG
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEA-----RMYLKTMVDAGYEPDTATYTSLMNG 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
F + N LR+A + ++ GF P N + L + A+ Y++M+
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKG 245
+ + P+ T N +I K+G + A L+ M D G P ++ +L++G C KG
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 137/271 (50%), Gaps = 3/271 (1%)
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN-Y 260
I Y ++ L +L ++ +S TV S NAL+ A ++ M Y
Sbjct: 122 AIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMY 181
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING-YSQIGNCET 319
+ P++ T+N +I FC+ G +Y + +EM+ + PN+ ++ +I+G Y++ + E
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
G ++ M V + TYN I LCK K+K+A L+ + + PN T+S LI
Sbjct: 242 G-KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIH 300
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
G C ++ E A ++++ M + G P+ + LI CK DF+ A+ + ++ ++++ P
Sbjct: 301 GFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Query: 440 DSGILSALYNGLSRCGRKRLALELCSEMEAK 470
I+ +L NGL++ + A EL +++ K
Sbjct: 361 SFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 1/235 (0%)
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM-KVANVAP 299
Y +L +L++ + + +S V + N L+ EA RV+ EM K+ + P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+ TYN +I + + G+ + + EM R +KP+ ++ +I G + K+ + ++
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
+ + ST++ I C R S+ A + M S G PN T+ LI FC
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+DF+ A ++ + M++R PDS L L + G AL LC E K +P
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 126/349 (36%), Gaps = 74/349 (21%)
Query: 34 STSLTP-FRVKHILLKLKNDDVLSLEFFNWVHNC---------NPSSHTLQTHSILLHTL 83
+ SLTP R+ I +++ + F+ V N + S H+I+L+
Sbjct: 69 AASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQ 128
Query: 84 AN--NRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNK 141
AN + + + + I+ V S + LF L V K Y
Sbjct: 129 ANMLDHSLRVFRDLEKFEISRTVKSLNALLFACL----------------VAKDY----- 167
Query: 142 LRDATHTFLRM-KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN----- 195
++A ++ M K YG P LE+ N + + A + + EM R I PN
Sbjct: 168 -KEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFG 226
Query: 196 ------------------------------VYTLNMVICAYCKSGDLPRALETLEKMKDM 225
V T N+ I + CK A L+ M
Sbjct: 227 LMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSA 286
Query: 226 GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
G+ P V+++ LI G+CN+ A K+ +M N P+ + TLI CK G A
Sbjct: 287 GMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETA 346
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF----EEMGRN 330
+ E N P+ +L+NG ++ E L E+ RN
Sbjct: 347 LSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRN 395
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 128/268 (47%)
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
N + L + + EVA +++ + + T N ++ + G +A E E M+
Sbjct: 247 NQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEK 306
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
++ +I G L A K+ M ++ P+ F++L++ K G+L
Sbjct: 307 TDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDT 366
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
+ +V+ EM+ P+ + +LI+ Y++ G +T +RL++EM ++ +P+ Y +I
Sbjct: 367 SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 426
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
K GK + A + K+++K +P ST+S L+ + A +IY SMT+ G P
Sbjct: 427 SHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 486
Query: 405 NESTFGMLISVFCKNEDFDGAVQVLRDM 432
S++ L+++ D A ++L +M
Sbjct: 487 GLSSYISLLTLLANKRLVDVAGKILLEM 514
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 177/418 (42%), Gaps = 21/418 (5%)
Query: 47 LKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVAS 106
LK+ + +L F W + + + +L L R F S+ ++ + +S
Sbjct: 179 LKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQ-DSSS 237
Query: 107 SSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNA 166
+ F+A ++ V + A KL A F + +E G ++ N
Sbjct: 238 HGDLSFNA--------------YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNN 283
Query: 167 FLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMG 226
+ L A Y M + + T ++I + KSG L A + ++MK+
Sbjct: 284 LMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERK 343
Query: 227 LSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
L P+ F++L+ G L ++K+ M + P+ F +LI+ + K GKL A
Sbjct: 344 LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTAL 403
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGL 346
R++ EMK + PN Y +I +++ G E M +F++M + P TY+ L+
Sbjct: 404 RLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMH 463
Query: 347 CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
G+ A + + L P S++ +L+T + + A +I M ++GYS +
Sbjct: 464 AGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDV 523
Query: 407 STFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALY-----NGLSRCGRKRL 459
+L+ ++ K+ D A++ LR M + ++ I+ L+ NGL R L
Sbjct: 524 CASDVLM-IYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLL 580
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 147/336 (43%), Gaps = 15/336 (4%)
Query: 144 DATHTFLRM--KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC-----ISPNV 196
DA + R K+ +LP+ E L Q R + + EM +D +S N
Sbjct: 186 DAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNA 245
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
Y N VI K+ L A +K ++ G ++N L+ + NKGL A ++
Sbjct: 246 Y--NQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M + T+ +I K G+L A+++F +MK + P+ +++L++ + G
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+T M+++ EM +P + +LI K GK A L E+ K PN ++
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
+I E A +++ M G+ P ST+ L+ + + D A+++ M +
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAG 483
Query: 437 MTPDSGILSALYNGLSRCGRKRL---ALELCSEMEA 469
+ P LS+ + L+ KRL A ++ EM+A
Sbjct: 484 LRPG---LSSYISLLTLLANKRLVDVAGKILLEMKA 516
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%)
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
+N +I K KL A+ F + + + +T TYN L+ + G ++E M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
+ D TY +I L K G+ A L +++ + L P+ S FS+L+
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
+ + ++Y M G+ P+ + F LI + K D A+++ +M P+ G+ + +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 448 YNGLSRCGRKRLALELCSEMEAKRLLP 474
++ G+ +A+ + +ME LP
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLP 451
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 94/207 (45%)
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+N L+ F +G ++A+ ++ M+ + + TY +I ++ G + +LF++M
Sbjct: 280 TYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM 339
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
+++P +++L+ + K G+ + + E+ P+A+ F +LI
Sbjct: 340 KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKL 399
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
+ A +++ M G+ PN + M+I K+ + A+ V +DM P S L
Sbjct: 400 DTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCL 459
Query: 448 YNGLSRCGRKRLALELCSEMEAKRLLP 474
+ G+ A+++ + M L P
Sbjct: 460 LEMHAGSGQVDSAMKIYNSMTNAGLRP 486
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 174/424 (41%), Gaps = 53/424 (12%)
Query: 51 NDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNT 110
ND +LEFFNWV + HT +T + ++ L +F+ + +++ R+I N S N
Sbjct: 59 NDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIG-NTESVPNH 117
Query: 111 LFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSS 170
+ F VFK Y + +++A + ++ ++ +S
Sbjct: 118 V----------------TFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDE--------TS 153
Query: 171 LLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT 230
L A E C NV +S T
Sbjct: 154 FYNLVDALCEHKHVVEAEELCFGKNVIG------------------------NGFSVSNT 189
Query: 231 VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS 290
+ N ++ G+ G G + M V+ ++ +++ ++ CK GK +A +++
Sbjct: 190 KIH-NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYK 248
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
EMK + + V YNT+I E G+R+F EM +P++ T+N +I LC+DG
Sbjct: 249 EMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDG 308
Query: 351 KTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFG 410
+ + A ++ E+ K P++ T+ L + + SE ++ M G P T+
Sbjct: 309 RMRDAYRMLDEMPKRGCQPDSITYMCLFSR--LEKPSE-ILSLFGRMIRSGVRPKMDTYV 365
Query: 411 MLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
ML+ F + + V + M + TPDS +A+ + L + G +A E EM +
Sbjct: 366 MLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 425
Query: 471 RLLP 474
L P
Sbjct: 426 GLSP 429
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 114/277 (41%), Gaps = 12/277 (4%)
Query: 207 CKSGDLPRALETLEKM-KDMGLSPTVVSFNALIS--GYCNKGLLGLALKMKSLMGNYRVS 263
C S D +ALE + ++ G T +FN +I G + + AL + ++GN
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWAL-INRMIGNTESV 114
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
PN VTF + + + EA + ++ N+ T YN L++ + + L
Sbjct: 115 PNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEEL 173
Query: 324 FEEMGRNQVK-----PDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALI 378
G+N + + +N ++ G K G K K++D + + + ++S +
Sbjct: 174 C--FGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYM 231
Query: 379 TGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMT 438
C +A ++Y+ M S + + +I ++ + ++V R+M +R
Sbjct: 232 DIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCE 291
Query: 439 PDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
P+ + + L GR R A + EM + P+
Sbjct: 292 PNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPD 328
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 185/444 (41%), Gaps = 28/444 (6%)
Query: 23 IHSQWENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHT 82
IH Q+ + + LT V + L+ D+ +L FF W C ++ H
Sbjct: 23 IHGQYPREYTAAKPLTHDNV-YSCLRESPADLKTLNFFFW---CAKQNNYFHDDRAFDHM 78
Query: 83 LANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKL 142
+ K + + RII S C+ P VF + + + +
Sbjct: 79 VGVVEKLTREYYSIDRIIERLKISG--------------CEIKPRVFLLLLEIFWRGHIY 124
Query: 143 RDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMV 202
A + M +GF+P + N + +L AL + +R N ++ ++
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIR----FRNFFSFDIA 180
Query: 203 ICAYCKSG---DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
+ +C G DL L++M G P F ++ C G + A ++ LM
Sbjct: 181 LSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMIC 240
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
+S +V ++ L++GF + G+ +A +F++M +PN VTY +LI G+ +G +
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
+ ++ + PDI+ N +I + G+ ++A + L+K LVP+ TF+++++
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILS 360
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
C+ + + R IG + T +L + F K A++VL M +
Sbjct: 361 SLCLSGKFD---LVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFAL 417
Query: 440 DSGILSALYNGLSRCGRKRLALEL 463
D + + L R G R A+++
Sbjct: 418 DCYTYTVYLSALCRGGAPRAAIKM 441
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 150/372 (40%), Gaps = 71/372 (19%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC--ISPNVYTLNMVICAYCK 208
RM GF P E L L R V+ AF C IS +V +M++ + +
Sbjct: 202 RMIGEGFYPNRERFGQILR--LCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFR 259
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVT 268
SG+ +A++ KM +G SP +V++ +LI G+ + G++ A + S + + ++P++V
Sbjct: 260 SGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVL 319
Query: 269 FNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY------------------------ 304
N +I+ + + G+ EA +VF+ ++ + P+ T+
Sbjct: 320 CNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIG 379
Query: 305 --------NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
N L N +S+IG +++ M D TY + LC+ G + A
Sbjct: 380 TDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAI 439
Query: 357 NLVKELDK--------------DNLVP---------------------NASTFSALITGQ 381
+ K + K D+L+ + +++ I G
Sbjct: 440 KMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGL 499
Query: 382 CVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
E A+ + M G PN T+ +IS CK ++ + ++LR+ + + D
Sbjct: 500 VRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDP 559
Query: 442 GILSALYNGLSR 453
+Y+ LSR
Sbjct: 560 NTKFQVYSLLSR 571
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 113/267 (42%), Gaps = 17/267 (6%)
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
+E++K G F L+ + + A+++ + M ++ PN N +++ K
Sbjct: 96 IERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFK 155
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMR--------LFEEMGRN 330
++ A +F ++ N +++ ++ + C G R + + M
Sbjct: 156 LNVVNGALEIFEGIRFRNF----FSFDIALSHF-----CSRGGRGDLVGVKIVLKRMIGE 206
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
P+ + ++ C+ G +A +V + + + + +S L++G ++A
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 391 FQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
++ M IG SPN T+ LI F D A VL + + PD + + + +
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT 326
Query: 451 LSRCGRKRLALELCSEMEAKRLLPEGF 477
+R GR A ++ + +E ++L+P+ +
Sbjct: 327 YTRLGRFEEARKVFTSLEKRKLVPDQY 353
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 164/371 (44%), Gaps = 20/371 (5%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
T+ T ++L+ A+++ + A +LR ++ + ++ L+ L+ S C S V DA
Sbjct: 466 TMSTFNMLMSVCASSQDIEGARGVLR-LVQESGMTADCKLYTTLISS---CAKSGKV-DA 520
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+F+ F +M G L + A + + + A Y +R
Sbjct: 521 MFEV-------------FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKN 567
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMK--DMGLSPTVVSFNALISGYCNKGLLGL 249
+ P+ N +I A +SG + RA + L +MK + P +S AL+ CN G +
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 250 ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
A ++ ++ Y + + +N K G A ++ +MK +V P+ V ++ LI+
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Query: 310 GYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP 369
+ + ++ ++ ++Y++L+ C KKA L +++ L P
Sbjct: 688 VAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRP 747
Query: 370 NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
ST +ALIT C N +A + + ++G PN T+ ML+ + +DF+ + ++L
Sbjct: 748 TISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 807
Query: 430 RDMLDRSMTPD 440
++P+
Sbjct: 808 SQAKGDGVSPN 818
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 128/285 (44%), Gaps = 2/285 (0%)
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
++P + T NM++ S D+ A L +++ G++ + LIS G +
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
++ M N V N+ TF LI+G + G++ +A+ + ++ NV P+ V +N LI+
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 312 SQIGNCETGMRLFEEMGR--NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP 369
Q G + + EM + + PD ++ AL+ C G+ ++A + + + K +
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 370 NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
++ + + + A IY+ M +P+E F LI V + D A +L
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 430 RDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+D + + + S+L + ALEL ++++ +L P
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRP 747
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 174/435 (40%), Gaps = 9/435 (2%)
Query: 42 VKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIIN 101
V HI +K D + + H + S + LH +N R +T+ + R + +
Sbjct: 355 VSHIRKDVKGDWKFPSDGKHVGHQIDESMPQFPARNFELHN-SNGRSPETSDAYNRLLRD 413
Query: 102 VNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTL 161
+ + L D L L D + + FK +++A R + PT+
Sbjct: 414 GRIKDCISLLED--LDQRDLLDMDKIYHASFFKACKKQRAVKEA----FRFTKLILNPTM 467
Query: 162 ESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEK 221
+ N +S + E A R ++ ++ + +I + KSG + E +
Sbjct: 468 STFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQ 527
Query: 222 MKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGK 281
M + G+ + +F ALI G G + A ++ + V P+ V FN LI+ + G
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA 587
Query: 282 LHEAYRVFSEMKVAN--VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTY 339
+ A+ V +EMK + P+ ++ L+ G E +++ + + ++ Y
Sbjct: 588 VDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVY 647
Query: 340 NALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTS 399
+ K G A ++ K++ + ++ P+ FSALI + AF I + S
Sbjct: 648 TIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKS 707
Query: 400 IGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL 459
G ++ L+ C +D+ A+++ + + P ++AL L +
Sbjct: 708 QGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPK 767
Query: 460 ALELCSEMEAKRLLP 474
A+E E++ L P
Sbjct: 768 AMEYLDEIKTLGLKP 782
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
D + A+ K N ++ A + + +YG T E ++S + + A +
Sbjct: 606 DPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACS 665
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
Y++M+ ++P+ + +I + L A L+ K G+ +S+++L+ C
Sbjct: 666 IYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACC 725
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
N AL++ + + ++ P + T N LI C+ +L +A E+K + PNT+
Sbjct: 726 NAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTI 785
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
TY+ L+ + + E +L + + V P+++ I LCK
Sbjct: 786 TYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC-ITSLCK 830
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 134/293 (45%), Gaps = 18/293 (6%)
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK- 252
P+ T V+ A+ +G + RA + L +M MG+ +++N L+ GYC + + A
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
++ + + + P+VV++N +I+G A F+EM+ +AP ++Y TL+ ++
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 313 QIGNCETGMRLFEEMGRN-QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
G + R+F+EM + +VK D++ +N L+ G C+ G + A +V + ++ PN
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 372 STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRD 431
+T+ +L G A +++ I C + + D
Sbjct: 630 ATYGSLANGVSQARKPGDALLLWKE----------------IKERCAVKKKEAPSDSSSD 673
Query: 432 MLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQEKIAI 484
+ PD G+L L + R + ALE+ + ME + P +KI +
Sbjct: 674 PAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYV 726
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 8/206 (3%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSL---LQLRRAEVALAF 183
+ + V + N + A M G + N L LQ+ RAE L
Sbjct: 453 VTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL-- 510
Query: 184 YREMRRDC-ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
REM D I P+V + N++I D AL +M+ G++PT +S+ L+ +
Sbjct: 511 -REMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 243 NKGLLGLALKM-KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
G LA ++ +M + RV +++ +N L+ G+C+ G + +A RV S MK PN
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEM 327
TY +L NG SQ + L++E+
Sbjct: 630 ATYGSLANGVSQARKPGDALLLWKEI 655
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 137/351 (39%), Gaps = 42/351 (11%)
Query: 159 PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET 218
P + NA L++ L + + EM P+V T N++I + G +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYR----------------- 261
LE++ D G+ + + ++L++ Y G L A ++ M R
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353
Query: 262 ------VSPNVVTFNTLINGFCKEGKLHE--AYRVFSEMKVANV-------------APN 300
+ +G+ ++ E VF ++ +V AP+
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPD 413
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVK---PDILTYNALILGLCKDGKTKKAAN 357
+ Y TL+ GY + G R+ E M R + PD +TY ++ G +A
Sbjct: 414 SRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQ 473
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTS-IGYSPNESTFGMLISVF 416
++ E+ + + N T++ L+ G C + +RA + R MT G P+ ++ ++I
Sbjct: 474 VLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGC 533
Query: 417 CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
+D GA+ +M R + P + L + G+ +LA + EM
Sbjct: 534 ILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 198 TLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK--- 254
+L ++ A KSG A+ ++ M G P V ++ A ++ G G +K
Sbjct: 155 SLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFI 214
Query: 255 ------------SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
SL+G R P+ FN ++N G + +++F EM + P+ +
Sbjct: 215 AITRRVKRFGDQSLVGQSR--PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVL 272
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
TYN +I +++G E + + E + +K + T ++L+ G + A +V+ +
Sbjct: 273 TYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAM 332
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 151/342 (44%), Gaps = 9/342 (2%)
Query: 140 NKLRDATHTF-LRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYT 198
N+ + A F L K++ + P ++ L ++ + A + M + + P +
Sbjct: 122 NRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDV 181
Query: 199 LNMVICAYCKSGDLPRALETLEKMKDMG-LSPTVVSFNALISGYCNKGLLGLALKMKSLM 257
+I Y KS L +A TLE MK + P V +F LIS C G L + M
Sbjct: 182 YTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEM 241
Query: 258 GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM-KVANVAPNTVTYNTLINGYSQIGN 316
V + VT+NT+I+G+ K G E V ++M + + P+ T N++I Y N
Sbjct: 242 SYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRN 301
Query: 317 ---CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
E+ F+ MG V+PDI T+N LIL K G KK +++ ++K T
Sbjct: 302 MRKMESWYSRFQLMG---VQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVT 358
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
++ +I E+ ++R M G PN T+ L++ + K VLR ++
Sbjct: 359 YNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV 418
Query: 434 DRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ + D+ + + N + G EL +ME ++ P+
Sbjct: 419 NSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPD 460
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 171/418 (40%), Gaps = 50/418 (11%)
Query: 64 HNCNPS---SHTLQTHSIL--LHTLANNRKF-----KTAHSILRRIINVNVASSSNTLFD 113
H +P S L+T + + + AN+ K+ K L I N S+ +F+
Sbjct: 73 HQVDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFN 132
Query: 114 ALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQ 173
LL + + +FK N + A+ F M G PT++ + +S +
Sbjct: 133 -LLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGK 191
Query: 174 LRRAEVALAFYREMRR--DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
+ A + M+ DC P+V+T ++I CK G + +M +G+ +
Sbjct: 192 SELLDKAFSTLEYMKSVSDC-KPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCST 250
Query: 232 VSFNALISGYCNKGLL-------------GLAL----KMKSLMGNYR------------- 261
V++N +I GY G+ G +L + S++G+Y
Sbjct: 251 VTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYS 310
Query: 262 ------VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
V P++ TFN LI F K G + V M+ + TVTYN +I + + G
Sbjct: 311 RFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAG 370
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
E +F +M VKP+ +TY +L+ K G K ++++++ ++V + F+
Sbjct: 371 RIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFN 430
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
+I + ++Y M P++ TF +I + + FD ++ + M+
Sbjct: 431 CIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 488
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 128/304 (42%), Gaps = 27/304 (8%)
Query: 56 SLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLF 112
+LE+ V +C P T ++L+ +F SI+ + + V S+ NT+
Sbjct: 201 TLEYMKSVSDCKPDVFTF---TVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTII 257
Query: 113 DA-------------LLCSYRLCDSSPLV--FDAVFKTYANLNKLRDATHTFLRMKEYGF 157
D L DS P V +++ +Y N +R + R + G
Sbjct: 258 DGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGV 317
Query: 158 LPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALE 217
P + + N + S + + + M + S T N+VI + K+G + + +
Sbjct: 318 QPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDD 377
Query: 218 TLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMG---NYRVSPNVVTFNTLIN 274
KMK G+ P +++ +L++ Y GL+ +K+ S++ N V + FN +IN
Sbjct: 378 VFRKMKYQGVKPNSITYCSLVNAYSKAGLV---VKIDSVLRQIVNSDVVLDTPFFNCIIN 434
Query: 275 GFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKP 334
+ + G L ++ +M+ P+ +T+ T+I Y+ G + L ++M + +
Sbjct: 435 AYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDIGK 494
Query: 335 DILT 338
LT
Sbjct: 495 KRLT 498
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC-NKGLLGLALKMKSLMGNY 260
+I Y K+G +AL+T M G +V SFNA + N L + + Y
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
+ + V+FN I FC+ G L AY EM+ + + P+ VTY TLI+ + C G
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
L+ M KP++ T+N I L + A +L+ + K + P++ T++ +I G
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
+ + A ++Y +M GY PN + +I CK +FD A + +D + + P+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 441 SGILSALYNGLSRCGR 456
+ L GL + G+
Sbjct: 352 LDTVEMLLKGLVKKGQ 367
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM-RRDCISP 194
Y + A TF M YG +++S NA L L F + + I
Sbjct: 116 YGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDI 175
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
+ + N+ I ++C+ G L A + +M+ GL+P VV++ LIS + +
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
+LM PN+ TFN I + +A + M V P+++TYN +I G+
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
+ R++ M KP++ Y +I LCK G A + K+ + PN T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 375 SALITGQCVRNNSERAFQI 393
L+ G + ++A I
Sbjct: 356 EMLLKGLVKKGQLDQAKSI 374
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Query: 154 EYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD-- 211
+YG S N + S +L + A REM + ++P+V T +I A K
Sbjct: 170 KYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCV 229
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNT 271
+ L L +K G P + +FN I N+ A + LM +V P+ +T+N
Sbjct: 230 IGNGLWNLMVLK--GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNM 287
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
+I GF A RV++ M PN Y T+I+ + GN + + ++ R +
Sbjct: 288 VIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKK 347
Query: 332 VKPDILTYNALILGLCKDGKTKKAANLVK 360
P++ T L+ GL K G+ +A ++++
Sbjct: 348 WYPNLDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 1/212 (0%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
D + F+ K++ L L A M++ G P + + +S+L + R +
Sbjct: 174 DIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNG 233
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
+ M PN+ T N+ I A + L M + + P +++N +I G+
Sbjct: 234 LWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF 293
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
+A ++ + M PN+ + T+I+ CK G AY + + PN
Sbjct: 294 LARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLD 353
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKP 334
T L+ G + G + + E + R +V P
Sbjct: 354 TVEMLLKGLVKKGQLDQAKSIMELVHR-RVPP 384
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 185/482 (38%), Gaps = 65/482 (13%)
Query: 37 LTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPS-SHTLQTHSILLHTLANNRKFKTAHSI 95
LTP + IL K KN V +L+ F PS H ++ ++ L + + +
Sbjct: 10 LTPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 96 LRRIIN-------------VNVASSSNTLFDALLCSYRL----CDSSPLVFDAVFKTYAN 138
+ R+ + S + L DA+ L C + L FD + +
Sbjct: 69 IERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVK 128
Query: 139 LNKLRDATHTFLRMKEYGFL--PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
++L A H F R YG+ + + N + L Q+ R+++A ++EM P+
Sbjct: 129 ESELEAACHIF-RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 197 YTLNMVICAYCKSGDLPRALETLEKM----KDMGLSPTVVSFNALISGYCNKG------- 245
+ +++ +C G L A L M G +V + L+ C+ G
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 246 LLGLALKM------------------KSLMGNYRVS------------PNVVTFNTLING 275
+LG L+ S G RV P + +++ +
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 276 FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF-EEMGRNQVKP 334
+EGKL E V M+ P Y + + G + + + +EM + P
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 335 DILTYNALILGLCKDGKTKKAANLVKELDKD-NLVPNASTFSALITGQCVRNNSERAFQI 393
+ YN LI GLC DGK+ +A +K++ K + V N T+ L+ G C A Q+
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 394 YRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSR 453
M + P T+ M+I C + AV L +M+ + M P+S + AL +
Sbjct: 428 MEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCF 487
Query: 454 CG 455
C
Sbjct: 488 CA 489
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 185/482 (38%), Gaps = 65/482 (13%)
Query: 37 LTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPS-SHTLQTHSILLHTLANNRKFKTAHSI 95
LTP + IL K KN V +L+ F PS H ++ ++ L + + +
Sbjct: 10 LTPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 96 LRRIIN-------------VNVASSSNTLFDALLCSYRL----CDSSPLVFDAVFKTYAN 138
+ R+ + S + L DA+ L C + L FD + +
Sbjct: 69 IERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVK 128
Query: 139 LNKLRDATHTFLRMKEYGFL--PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNV 196
++L A H F R YG+ + + N + L Q+ R+++A ++EM P+
Sbjct: 129 ESELEAACHIF-RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 197 YTLNMVICAYCKSGDLPRALETLEKM----KDMGLSPTVVSFNALISGYCNKG------- 245
+ +++ +C G L A L M G +V + L+ C+ G
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 246 LLGLALKM------------------KSLMGNYRVS------------PNVVTFNTLING 275
+LG L+ S G RV P + +++ +
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 276 FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF-EEMGRNQVKP 334
+EGKL E V M+ P Y + + G + + + +EM + P
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 335 DILTYNALILGLCKDGKTKKAANLVKELDKD-NLVPNASTFSALITGQCVRNNSERAFQI 393
+ YN LI GLC DGK+ +A +K++ K + V N T+ L+ G C A Q+
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 394 YRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSR 453
M + P T+ M+I C + AV L +M+ + M P+S + AL +
Sbjct: 428 MEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCF 487
Query: 454 CG 455
C
Sbjct: 488 CA 489
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 127/265 (47%), Gaps = 1/265 (0%)
Query: 193 SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK 252
S V N+ + + KS DL ++ + ++M + G+ P +F +IS G+ A++
Sbjct: 172 SREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVE 231
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
M ++ P+ VT +I+ + + G + A ++ + + VT++TLI Y
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
GN + + ++EEM VKP+++ YN LI + + + +A + K+L + PN S
Sbjct: 292 VSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWS 351
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
T++AL+ + A IYR M G S + L+S+ N D A ++ +DM
Sbjct: 352 TYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
Query: 433 LD-RSMTPDSGILSALYNGLSRCGR 456
+ + PDS S+L + GR
Sbjct: 412 KNCETCDPDSWTFSSLITVYACSGR 436
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 138/329 (41%), Gaps = 3/329 (0%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
++++ K + L + F M E G P + +S Q + A+ ++ +
Sbjct: 176 ILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEK 235
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M P+ T+ +I AY ++G++ AL ++ + V+F+ LI Y G
Sbjct: 236 MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGN 295
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
L + M V PN+V +N LI+ + + +A ++ ++ PN TY
Sbjct: 296 YDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAA 355
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK-TKKAANLVKELDK- 364
L+ Y + + + ++ EM + ++ YN L L +C D + +A + +++
Sbjct: 356 LVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTL-LSMCADNRYVDEAFEIFQDMKNC 414
Query: 365 DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDG 424
+ P++ TFS+LIT A M G+ P +I + K + D
Sbjct: 415 ETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Query: 425 AVQVLRDMLDRSMTPDSGILSALYNGLSR 453
V+ +L+ +TPD L N +++
Sbjct: 475 VVRTFDQVLELGITPDDRFCGCLLNVMTQ 503
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%)
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
L + +L+ + S V+ +N + F K L ++ ++F EM + P+ T+ T+I+
Sbjct: 160 LVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISC 219
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
Q G + + FE+M +PD +T A+I + G A +L + +
Sbjct: 220 ARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRID 279
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
A TFS LI V N + IY M ++G PN + LI + + A + +
Sbjct: 280 AVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYK 339
Query: 431 DMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
D++ TP+ +AL R AL + EM+ K L
Sbjct: 340 DLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGL 381
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 161/356 (45%), Gaps = 26/356 (7%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLP--TLESCNAFLSSLLQLRRAEVA 180
D+ V + + YA +L A F + LP T+ S A +S+ Q A
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLP----LPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLS---PTVVSFNAL 237
L + +MR+ + P+ L V+ A+ DL + + MGL ++S N +
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANV 297
Y G + A ++ + SPN++ +N +I+G+ K G EA +F EM +V
Sbjct: 267 ---YAKCGQVATA----KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
P+T++ + I+ +Q+G+ E ++E +GR+ + D+ +ALI K G + A
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV-EGAR 378
Query: 358 LV--KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF-GMLIS 414
LV + LD+D +V +SA+I G + + A +YR+M G PN+ TF G+L++
Sbjct: 379 LVFDRTLDRDVVV-----WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 415 VFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
+G M D + P + + + L R G A E+ M +
Sbjct: 434 CNHSGMVREGW-WFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 164/364 (45%), Gaps = 38/364 (10%)
Query: 126 PLVF--DAVFKTYANLNKLRDATHTFLRMK-------EYGFLPTLESCNAFLSSLLQLRR 176
P +F +A+ + Y+ N +DA + M+ + F L++C+ S LQ+ R
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL--SHLQMGR 139
Query: 177 AEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGL---SPTVVS 233
A F R +V+ N +I Y K L A E GL T+VS
Sbjct: 140 FVHAQVF-----RLGFDADVFVQNGLIALYAKCRRLGSARTVFE-----GLPLPERTIVS 189
Query: 234 FNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF-SEM 292
+ A++S Y G AL++ S M V P+ V +++N F L + + S +
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 293 KVA-NVAPNT-VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
K+ + P+ ++ NT+ Y++ G T LF++M P+++ +NA+I G K+G
Sbjct: 250 KMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMK----SPNLILWNAMISGYAKNG 302
Query: 351 KTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFG 410
++A ++ E+ ++ P+ + ++ I+ + E+A +Y + Y +
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362
Query: 411 MLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
LI +F K G+V+ R + DR++ D + SA+ G GR R A+ L ME
Sbjct: 363 ALIDMFAKC----GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG 418
Query: 471 RLLP 474
+ P
Sbjct: 419 GVHP 422
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 127/307 (41%), Gaps = 12/307 (3%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
YA ++ A F +MK P L NA +S + A A+ + EM + P+
Sbjct: 267 YAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
++ I A + G L +A E + V +ALI + G +++
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG----SVEGAR 378
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
L+ + + +VV ++ +I G+ G+ EA ++ M+ V PN VT+ L+ + G
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
G F M +++ P Y +I L + G +A ++K + + P + +
Sbjct: 439 MVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---VQPGVTVWG 495
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
AL++ + E + + SI S N + L +++ +D +V M ++
Sbjct: 496 ALLSACKKHRHVELGEYAAQQLFSIDPS-NTGHYVQLSNLYAAARLWDRVAEVRVRMKEK 554
Query: 436 SMTPDSG 442
+ D G
Sbjct: 555 GLNKDVG 561
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 125/290 (43%), Gaps = 15/290 (5%)
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
+ + +I A GD+ A + + + P + +NA+I GY AL M S
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLP----RPQIFPWNAIIRGYSRNNHFQDALLMYSN 109
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M RVSP+ TF L+ L V +++ + N LI Y++
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+ +FE G + I+++ A++ ++G+ +A + ++ K ++ P+ +
Sbjct: 170 LGSARTVFE--GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVS 227
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
++ + ++ I+ S+ +G L +++ K G V + + D+
Sbjct: 228 VLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC----GQVATAKILFDKM 283
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQEKIAITS 486
+P+ + +A+ +G ++ G R A+++ EM K + P + I+ITS
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP-----DTISITS 328
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 138/320 (43%), Gaps = 10/320 (3%)
Query: 168 LSSLLQLRRAEVALAFYREMRRDCISPNVYT---LNMVICAYCKSGDLPRALETLEKMKD 224
L L ++R + A A E+R+D PN+ + +++++C K G LE KM+
Sbjct: 110 LHILARMRYFDQAWALMAEVRKD--YPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEK 167
Query: 225 MGLSPT--VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKL 282
V FN L+ +C + + A + + + R +P+V T N L+ GF + G +
Sbjct: 168 EIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDV 226
Query: 283 HEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL 342
+ EM PN+VTY I+G+ + N +RLFE+M R + L
Sbjct: 227 TATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTL 286
Query: 343 ILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
I G KA L E+ K L P+ ++AL++ + A ++ + M G
Sbjct: 287 IHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGI 346
Query: 403 SPNESTF-GMLISVFCKNE-DFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
P+ TF M I + E F+G + + M +RS+ P + + L G L
Sbjct: 347 EPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLG 406
Query: 461 LELCSEMEAKRLLPEGFGQE 480
L+L M K P G E
Sbjct: 407 LDLWKYMLEKGYCPHGHALE 426
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 178/428 (41%), Gaps = 26/428 (6%)
Query: 32 PLSTSLTPFRVKHILLKL---KNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRK 88
PLS SL+P V +L +L ++ + +LEFF + + SS T + LH LA R
Sbjct: 60 PLS-SLSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRY 118
Query: 89 FKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHT 148
F A +++ + S LLC A F +Y +
Sbjct: 119 FDQAWALMAEVRKDYPNLLSFKSMSILLCKI-----------AKFGSY------EETLEA 161
Query: 149 FLRMKEYGFLPT--LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAY 206
F++M++ F ++ N L + R + A + + ++ +P+V T+N+++ +
Sbjct: 162 FVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGF 220
Query: 207 CKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNV 266
++GD+ +M G P V++ I G+C K G AL++ M V
Sbjct: 221 KEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITV 280
Query: 267 VTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
TLI+G +A ++F E+ + P+ YN L++ + G+ +++ +E
Sbjct: 281 QILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKE 340
Query: 327 MGRNQVKPDILTYNALILGLCKDGK--TKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
M ++PD +T++++ +G+ K + +++ + +LVP T L+ C
Sbjct: 341 MEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHN 400
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGIL 444
+++ M GY P+ +L + C + A + ++R +
Sbjct: 401 GEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVY 460
Query: 445 SALYNGLS 452
L LS
Sbjct: 461 RMLETSLS 468
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 142/331 (42%), Gaps = 11/331 (3%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
+ + + + L K + A F + +E+GF P ++ L +L + + A + +M
Sbjct: 233 ILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM 292
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLE--KMKDMGLSPTVVSFNALISGYC-NK 244
+ + + +I +CK G A E K K+ L P V+ LI+ C N
Sbjct: 293 LKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKND 350
Query: 245 GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
G + A +M + + F+ +I+ C+ + +A + +M AP +
Sbjct: 351 GTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVF 410
Query: 305 NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
N +++ S+ G+ + + + M +KPD+ TY +I G K G +A ++ E K
Sbjct: 411 NLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKK 470
Query: 365 DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC-KNEDFD 423
+ + T+ ALI G C + A ++ M G PN + LI FC K D++
Sbjct: 471 KHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWE 530
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRC 454
A + +M + + L+A+ GL R
Sbjct: 531 KAEVLFEEMKQKGLH-----LNAISQGLIRA 556
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 168 LSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGL 227
+ SL ++R + A A +M +P N+V+ A K+GDL A E L+ M+ GL
Sbjct: 379 IHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGL 438
Query: 228 SPTVVSFNALISGYCNKGLLGLALKM--KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
P V ++ +ISGY G++ A ++ ++ + ++SP VT++ LI G+CK + EA
Sbjct: 439 KPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP--VTYHALIRGYCKIEEYDEA 496
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYS-QIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
++ +EM V PN YN LI + + + E LFEEM K L NA+
Sbjct: 497 LKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEM-----KQKGLHLNAISQ 551
Query: 345 GLCKDGKTKKAANLVKE 361
GL + K ++ V E
Sbjct: 552 GLIRAVKEMESEAKVTE 568
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 108/286 (37%), Gaps = 40/286 (13%)
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
+ C N+ LN +I + K G A + K ++ G +P ++ + C + +
Sbjct: 223 KESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFM 282
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF--SEMKVANVAPNTVTYN 305
A + M V +I FCKEGK EAY V+ ++ K ++ P V
Sbjct: 283 DWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA-- 340
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK-DGKTKKAANLVKELDK 364
LI LCK DG A ++ +L
Sbjct: 341 -----------------------------------TLITALCKNDGTITFAQEMLGDLSG 365
Query: 365 DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDG 424
+ FS +I C N + A + M S G +P + F +++ K D D
Sbjct: 366 EARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDE 425
Query: 425 AVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
A +VL+ M R + PD + + +G ++ G A E+ +E + K
Sbjct: 426 AKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKK 471
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 157/341 (46%), Gaps = 8/341 (2%)
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
L SYR S +V+ V + Y + K++ A TFL M E G P +C L + +
Sbjct: 180 LQLSYR---PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARW 236
Query: 175 RRAEVALAFYR--EMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVV 232
R L FY+ + RR +S +VY N ++ + K + ++ +M + G+ P
Sbjct: 237 GRHSAMLTFYKAVQERRILLSTSVY--NFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEF 294
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
++ ++S Y +G ALK M + P VT++++I+ K G +A ++ +M
Sbjct: 295 TYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDM 354
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
+ + P+ T T+++ Y + N + LF +M RN++ D + +I K G
Sbjct: 355 RSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLF 414
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGML 412
A ++ +E ++ NL+ + T+ A+ N +A + M + + + ++
Sbjct: 415 HDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVM 474
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSR 453
+ + K ++ D A + R L ++ PD+ + + N +R
Sbjct: 475 LQCYAKIQNVDCAEEAFR-ALSKTGLPDASSCNDMLNLYTR 514
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 22/289 (7%)
Query: 65 NCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---NTLFDALLCSYRL 121
C+P + T+ SIL++ L N K + A I R + N+ + NTL A+L + +L
Sbjct: 734 GCDPGAVTI---SILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKL 790
Query: 122 -CDS-------------SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAF 167
C S S ++ + Y +L A F + G +
Sbjct: 791 QCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNM 850
Query: 168 LSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRAL-ETLEKMKDMG 226
+ + + AL+ + EM++ I P + NM++ C + L + E L+ M+ G
Sbjct: 851 IMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV-KICATSRLHHEVDELLQAMERNG 909
Query: 227 LSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
+ ++ LI Y A K +L+ + + F++L++ K G + EA
Sbjct: 910 RCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAE 969
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
R + +M A ++P++ T++ GY G+ E G+ +E+M R+ V+ D
Sbjct: 970 RTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDD 1018
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 154/413 (37%), Gaps = 65/413 (15%)
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
S + + + YA + + A F + + G LP SCN L+ +L E A F
Sbjct: 467 SRFAYIVMLQCYAKIQNVDCAEEAFRALSKTG-LPDASSCNDMLNLYTRLNLGEKAKGFI 525
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM------KDMGLSPTVVSFNALI 238
+++ D + ++ + YCK G + A + + KM KD T+ ++
Sbjct: 526 KQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIV 585
Query: 239 SGY-----------CNKGLLGLALKMKSLMGN-----------YRVSPNVVTFNTLINGF 276
+ + + LGL L ++ GN ++ N +I+ F
Sbjct: 586 NKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSF 645
Query: 277 CKEG-----------------------------------KLHEAYRVFSEMKVANVAPNT 301
+EG KL EA R++ + P
Sbjct: 646 VREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKT-PGK 704
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
++I+ Y + G E LF E P +T + L+ L GK ++A ++ +
Sbjct: 705 SVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRT 764
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
+ N+ + ++ LI + A +IY M + G + T+ +ISV+ +
Sbjct: 765 CLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQ 824
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
D A+++ + + D I + + + G+ AL L SEM+ K + P
Sbjct: 825 LDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 142/343 (41%), Gaps = 31/343 (9%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL---QLRRAEVALAFY 184
V ++ Y L DA F+ E G P + + +++L + R AE
Sbjct: 706 VIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAE------ 759
Query: 185 REMRRDCISPNV----YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
+ R C+ N+ N +I A ++G L A E E+M G+ ++ ++N +IS
Sbjct: 760 -HISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISV 818
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
Y L A+++ S + + + +I + K GK+ EA +FSEM+ + P
Sbjct: 819 YGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPG 878
Query: 301 TVTYNTLINGYSQIGNCETGM------RLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
T +YN ++ C T L + M RN D+ TY LI + + +
Sbjct: 879 TPSYNMMVK------ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAE 932
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNS-ERAFQIYRSMTSIGYSPNESTFGMLI 413
A + L K+ +P + + + + V+ E A + Y M+ G SP+ + ++
Sbjct: 933 AEKTIT-LVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTIL 991
Query: 414 SVFCKNEDFDGAVQVLRDMLDRSMTPD---SGILSALYNGLSR 453
+ D + + M+ S+ D S ++ LY + +
Sbjct: 992 KGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAVGK 1034
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 130/322 (40%), Gaps = 3/322 (0%)
Query: 135 TYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISP 194
Y +KL++A +L E P + + + ++ E A + E P
Sbjct: 679 VYGRQHKLKEAKRLYLAAGE-SKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDP 737
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
T+++++ A G A + + V +N LI G L A ++
Sbjct: 738 GAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIY 797
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
M V ++ T+NT+I+ + + +L +A +FS + + + + Y +I Y +
Sbjct: 798 ERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKG 857
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN-LVKELDKDNLVPNAST 373
G + LF EM + +KP +YN +++ +C + + L++ ++++ + ST
Sbjct: 858 GKMSEALSLFSEMQKKGIKPGTPSYN-MMVKICATSRLHHEVDELLQAMERNGRCTDLST 916
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
+ LI + A + + G + S F L+S K + A + M
Sbjct: 917 YLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMS 976
Query: 434 DRSMTPDSGILSALYNGLSRCG 455
+ ++PDS + G CG
Sbjct: 977 EAGISPDSACKRTILKGYMTCG 998
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 84/190 (44%), Gaps = 1/190 (0%)
Query: 289 FSEMKVA-NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLC 347
FS MK+ + P+ V Y ++ Y Q+G + F EM +PD + ++
Sbjct: 175 FSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYA 234
Query: 348 KDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNES 407
+ G+ K + + ++ + S ++ +++ ++ + ++ M G PNE
Sbjct: 235 RWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEF 294
Query: 408 TFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
T+ +++S + K + A++ +M P+ S++ + + G A+ L +M
Sbjct: 295 TYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDM 354
Query: 468 EAKRLLPEGF 477
++ ++P +
Sbjct: 355 RSQGIVPSNY 364
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 147/328 (44%), Gaps = 7/328 (2%)
Query: 173 QLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVV 232
Q A+ AL R+ + + N+VI + GDL A +++M +GL P V+
Sbjct: 142 QANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVI 201
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
++ ++I+GYCN G + A ++ M + N VT++ ++ G CK G + A + +EM
Sbjct: 202 TYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEM 261
Query: 293 KVAN----VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
+ + ++PN VTY +I + + E + + + MG P+ +T LI G+ +
Sbjct: 262 EKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLE 321
Query: 349 -DGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNES 407
D K + L+ +L K V + FS+ E A +I+R M G P+
Sbjct: 322 NDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGL 381
Query: 408 TFGMLISVFCKNEDFDGAVQVLRDMLDRSM--TPDSGILSALYNGLSRCGRKRLALELCS 465
+ C E + + +++ + + T DS I + L GL + G A +L
Sbjct: 382 ACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAK 441
Query: 466 EMEAKRLLPEGFGQEKIAITSPENGTNN 493
M K++ + EKI + G +
Sbjct: 442 SMLDKKMRLKVSHVEKIIEALKKTGDED 469
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 131/282 (46%), Gaps = 7/282 (2%)
Query: 195 NVYTLNMVICAYCKSGDLP-RALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
NV T+ +V+ C +L AL L K + + V++N +I + +KG L +A +
Sbjct: 129 NVKTMRIVL-TLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADML 187
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
M + P+V+T+ ++ING+C GK+ +A+R+ EM + N+VTY+ ++ G +
Sbjct: 188 IKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 314 IGNCETGMRLFEEM----GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP 369
G+ E + L EM G + P+ +TY +I C+ + ++A ++ + +P
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 370 NASTFSALITGQCVRNNSERAF-QIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
N T LI G + +A ++ + +G F + + ++ A ++
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKI 367
Query: 429 LRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
R ML R + PD S ++ L R L E+E K
Sbjct: 368 FRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKK 409
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 119/285 (41%), Gaps = 45/285 (15%)
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
+ + ++ V + +A+ L A M G P + + + ++ + + A
Sbjct: 163 ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 184 YREM-RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM--KDMG--LSPTVVSFNALI 238
+EM + DC+ N T + ++ CKSGD+ RALE L +M +D G +SP V++ +I
Sbjct: 223 AKEMSKHDCV-LNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVI 281
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLING----------------------- 275
+C K + AL + MGN PN VT LI G
Sbjct: 282 QAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGG 341
Query: 276 -------------FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMR 322
+ + EA ++F M V V P+ + + + +
Sbjct: 342 VSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFL 401
Query: 323 LFEEMGRNQVKPDILT--YNALILGLCKDGKTKKAANLVKE-LDK 364
L++E+ + VK I + + L+LGLC+ G + +AA L K LDK
Sbjct: 402 LYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDK 446
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 127/243 (52%), Gaps = 23/243 (9%)
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
+V T VI Y K GD+ A E +++ VV++ A++SGY L +A
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIA---- 128
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
++ NVV++NT+I+G+ + G++ +A +F EM N+ V++N+++ Q
Sbjct: 129 EMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQR 184
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G + M LFE M R D++++ A++ GL K+GK +A L + + N++ ++
Sbjct: 185 GRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII----SW 236
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD 434
+A+ITG N + A Q+++ M + +++ +I+ F +N + + A + M +
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMPERDF----ASWNTMITGFIRNREMNKACGLFDRMPE 292
Query: 435 RSM 437
+++
Sbjct: 293 KNV 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 149/362 (41%), Gaps = 51/362 (14%)
Query: 120 RLCDSSP----LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLR 175
RL D P + ++A+ YA N++ +A F M E F S N ++ ++ R
Sbjct: 223 RLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNR 278
Query: 176 RAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM-KDMGLSPTVVSF 234
A + M NV + +I Y ++ + AL KM +D + P V ++
Sbjct: 279 EMNKACGLFDRMP----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 235 NALISG--------------------------YCNKGLLGLALKMKSLMGNYRVSPN--- 265
+++S LL + K L+ ++ N
Sbjct: 335 VSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV 394
Query: 266 ----VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGM 321
++++N++I + G EA ++++M+ P+ VTY L+ S G E GM
Sbjct: 395 CQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGM 454
Query: 322 RLFEEMGRNQVKPDILTYNALILGLC-KDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
F+++ R++ P + ++ LC + G+ K N + + D+ + S + A+++
Sbjct: 455 EFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI---NCDDARLSRSFYGAILSA 511
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
V N A ++ + + G S + T+ ++ +++ N + A ++ M ++ +
Sbjct: 512 CNVHNEVSIAKEVVKKVLETG-SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQ 570
Query: 441 SG 442
G
Sbjct: 571 PG 572
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
P V LI CK GK+ EA ++F + +V VT+ +I GY ++G+ L
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFDGLPERDV----VTWTHVITGYIKLGDMREAREL 99
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
F+ R + +++T+ A++ G + + A L +E+ + N+V +++ +I G
Sbjct: 100 FD---RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGYAQ 152
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
++A +++ M N ++ ++ + D A+ + M R +
Sbjct: 153 SGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS---- 204
Query: 444 LSALYNGLSRCGR 456
+A+ +GL++ G+
Sbjct: 205 WTAMVDGLAKNGK 217
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 152/348 (43%), Gaps = 7/348 (2%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
+ A Y L +A F+ +E +E N + + + E A + M
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNKRTVIEY-NVMIKAYGISKSCEKACELFESMM 532
Query: 189 RDCISPNVYTLNMVICAYCKSGDLP-RALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
++P+ T N ++ S D+P + LEKM++ G + + A+IS + G L
Sbjct: 533 SYGVTPDKCTYNTLV-QILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQL 591
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
+A ++ M Y + P+VV + LIN F G + +A MK A + N+V YN+L
Sbjct: 592 NMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSL 651
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVK---PDILTYNALILGLCKDGKTKKAANLVKELDK 364
I Y+++G + ++ ++ ++ K PD+ T N +I + +KA + + K
Sbjct: 652 IKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM-K 710
Query: 365 DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDG 424
N TF+ ++ E A QI + M + + ++ ++ +F + F
Sbjct: 711 QRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKE 770
Query: 425 AVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRL 472
AV+ ++M+ + PD +L L + G + A+ E+ K +
Sbjct: 771 AVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 199/501 (39%), Gaps = 80/501 (15%)
Query: 28 ENLHPLSTSLTPF------RVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLH 81
+++ + +L+P+ + + I+LK + ++E F W + + ++I+L
Sbjct: 136 DSIEDVEDALSPWAERLSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLR 195
Query: 82 TLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNK 141
L K++ S+ +I + ++T + + Y+
Sbjct: 196 ILGKACKWRYVQSLWDEMIRKGIKPINST------------------YGTLIDVYSKGGL 237
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD--------CIS 193
A +M + G P + L + R + A F+++ D C+S
Sbjct: 238 KVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLS 297
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
YT N +I Y KSG + A ET ++M + G+ PT V+FN +I Y N G LG ++
Sbjct: 298 S--YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLG---EV 352
Query: 254 KSLMGNYRV--SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
SLM ++ +P+ T+N LI+ K + A F EMK + P+ V+Y TL+ +
Sbjct: 353 TSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAF 412
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK----------- 360
S E L EM + V+ D T +AL + +K+ + K
Sbjct: 413 SIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE 472
Query: 361 --------------------------ELDKDNLVPNASTFSALITGQCVRNNSERAFQIY 394
E++K ++ ++ +I + + E+A +++
Sbjct: 473 GYSANIDAYGERGYLSEAERVFICCQEVNKRTVIE----YNVMIKAYGISKSCEKACELF 528
Query: 395 RSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRC 454
SM S G +P++ T+ L+ + + L M + D A+ + +
Sbjct: 529 ESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKL 588
Query: 455 GRKRLALELCSEMEAKRLLPE 475
G+ +A E+ EM + P+
Sbjct: 589 GQLNMAEEVYKEMVEYNIEPD 609
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 130/303 (42%), Gaps = 39/303 (12%)
Query: 115 LLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLP----------TLESC 164
+C + + + ++ + K Y A F M YG P L S
Sbjct: 494 FICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASA 553
Query: 165 N-------------------------AFLSSLLQLRRAEVALAFYREMRRDCISPNVYTL 199
+ A +SS ++L + +A Y+EM I P+V
Sbjct: 554 DMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVY 613
Query: 200 NMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL--GLALKMKSLM 257
++I A+ +G++ +A+ +E MK+ G+ V +N+LI Y G L A+ K L
Sbjct: 614 GVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Query: 258 G-NYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
N P+V T N +IN + + + +A +F MK A N T+ ++ Y + G
Sbjct: 674 SCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEA-NEFTFAMMLCMYKKNGR 732
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
E ++ ++M ++ D L+YN+++ DG+ K+A KE+ + P+ STF +
Sbjct: 733 FEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKS 792
Query: 377 LIT 379
L T
Sbjct: 793 LGT 795
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+V+ + +A+ ++ A MKE G N+ + ++ + A A YR+
Sbjct: 611 VVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRK 670
Query: 187 MRRDCIS---PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
+ + C P+VYT N +I Y + + +A + MK G +F ++ Y
Sbjct: 671 LLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKK 729
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
G A ++ M ++ + +++N+++ F +G+ EA F EM + + P+ T
Sbjct: 730 NGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDST 789
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPD----ILTYNALI-LGLCKD 349
+ +L ++G + +R EE+ + ++K I T ++L+ +G C D
Sbjct: 790 FKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGDCVD 840
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGL 346
+F EM + NTVTY TLI G Q G+C+ +F+EM + V PDI+TYN L+ GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 347 CKDGKTKKA---------ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
CK+GK +KA +L L + PN T++ +I+G C + E A+ ++R M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
G P+ T+ LI ++ D + +++++M
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
+ +REM + + N T +I ++GD A E ++M G+ P ++++N L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 241 YCNKGLLGLALKMKSLMGNYR---------VSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
C G L AL + + V PNVVT+ T+I+GFCK+G EAY +F +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
MK P++ TYNTLI + + G+ L +EM + D TY L+ + DG+
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGR 179
Query: 352 TKKA 355
K
Sbjct: 180 LDKG 183
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 216 LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLING 275
+E +M GL V++ LI G G +A ++ M + V P+++T+N L++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 276 FCKEGKLHEA---------YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
CK GKL +A + +F + + V PN VTY T+I+G+ + G E LF +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
M + PD TYN LI +DG +A L+KE+ +AST+ L+T
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGR 179
Query: 387 SERAF 391
++ F
Sbjct: 180 LDKGF 184
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 265 NVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ---------IG 315
N VT+ TLI G + G A +F EM V P+ +TYN L++G + G
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 316 NCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS 375
E G LF + VKP+++TY +I G CK G ++A L +++ +D +P++ T++
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 376 ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVF 416
LI + + ++ + M S ++ + ST+G++ +
Sbjct: 135 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 149 FLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK 208
F M + G + + + L Q ++A ++EM D + P++ T N+++ CK
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK 63
Query: 209 SGDLPRAL--ETLEKMKDM-------GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN 259
+G L +AL +E D+ G+ P VV++ +ISG+C KG A + M
Sbjct: 64 NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKE 123
Query: 260 YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
P+ T+NTLI ++G + + EM+ A + TY + +
Sbjct: 124 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 19/264 (7%)
Query: 230 TVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF 289
T S L+ +G + AL M Y P+V +NT+IN C+ G +A +
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 290 SEMKVANV--APNTVTYNTLINGYSQIG---NCETGMR--------LFEEMGRNQVKPDI 336
+M++ P+T TY LI+ Y + G C +R +F EM PD+
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 337 LTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRS 396
+TYN LI G CK + +A L +++ VPN T+++ I V N E A ++ R+
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRT 343
Query: 397 MTSIGYS-PNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
M +G+ P ST+ LI + A ++ +M++ + P + + LS G
Sbjct: 344 MKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Query: 456 RKRLALELCSEMEAKRLLPEGFGQ 479
LA L E+ + + EG Q
Sbjct: 404 ---LASTLDEELHKR--MREGIQQ 422
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 109/294 (37%), Gaps = 34/294 (11%)
Query: 56 SLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRI------INVNVASSSN 109
+LEFF W+ H T + LA FK LR++ NV +S
Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASIT 169
Query: 110 TLF----------DALLCSYRL----CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEY 155
L +AL YR+ C ++ + + + A +M+
Sbjct: 170 CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLP 229
Query: 156 GFL--PTLESCNAFLSSLLQL-----------RRAEVALAFYREMRRDCISPNVYTLNMV 202
GF P + +SS + RR A +REM P+V T N +
Sbjct: 230 GFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCL 289
Query: 203 ICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY-R 261
I CK+ + RALE E MK G P V++N+ I Y + A++M M
Sbjct: 290 IDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGH 349
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIG 315
P T+ LI+ + + EA + EM A + P TY + + S G
Sbjct: 350 GVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 15/183 (8%)
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
+ P+V T NM+I + L RA + +M GL P +++N++I G C + L A
Sbjct: 45 LQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQAR 100
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
K VS + TFNTLING+CK ++ + +F EM + N +TY TLI+G+
Sbjct: 101 K---------VSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNA 371
Q+G+ T + +F+EM N V +T+ ++ LC + +KA ++ L K ++V N
Sbjct: 152 RQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML--LQKSSMVSNN 209
Query: 372 STF 374
T
Sbjct: 210 VTL 212
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 15/191 (7%)
Query: 269 FNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMG 328
+N +I+G CK GK EA +F+ + ++ + P+ TYN +I +S +G E +L+ EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAE---KLYAEMI 72
Query: 329 RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE 388
R + PD +TYN++I GLCK K +A + K + STF+ LI G C +
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFNTLINGYCKATRVK 123
Query: 389 RAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALY 448
++ M G N T+ LI F + DF+ A+ + ++M+ + S +
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Query: 449 NGLSRCGRKRL 459
L C RK L
Sbjct: 184 PQL--CSRKEL 192
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
++ MR + + N++I CK+G A + GL P V ++N +I
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----R 57
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
LG A K+ + M + P+ +T+N++I+G CK+ KL +A +V + + T
Sbjct: 58 FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCST 108
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
+NTLINGY + + GM LF EM R + +++TY LI G + G A ++ +E+
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Query: 364 KDNLVPNASTFSALITGQCVRNNSERA 390
+ + ++ TF ++ C R +A
Sbjct: 169 SNGVYSSSITFRDILPQLCSRKELRKA 195
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 13/180 (7%)
Query: 288 VFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLC 347
+F M+ +N+ +T YN +I+G + G + +F + + ++PD+ TYN +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 348 KDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNES 407
+ +A L E+ + LVP+ T++++I G C +N +A ++ +S S
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSC---------S 107
Query: 408 TFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
TF LI+ +CK + + +M R + + + L +G + G AL++ EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 153/351 (43%), Gaps = 9/351 (2%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLP--TLESCNAFLSSLLQLRRAEVALAFYRE 186
+ + + + + +D F M+++G + T SC F+ + + AL Y+
Sbjct: 101 LNVILRDFGISGRWQDLIQLFEWMQQHGKISVSTYSSCIKFVGA----KNVSKALEIYQS 156
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
+ + NVY N ++ K+G L ++ ++MK GL P VV++N L++G C K
Sbjct: 157 IPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAG-CIKVK 215
Query: 247 LGL--ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTY 304
G A+++ + + + + V + T++ G+ EA +MKV +PN Y
Sbjct: 216 NGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHY 275
Query: 305 NTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
++L+N YS G+ + L EM + P+ + L+ K G ++ L+ EL+
Sbjct: 276 SSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELES 335
Query: 365 DNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDG 424
N + L+ G E A I+ M G + ++IS C+++ F
Sbjct: 336 AGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKE 395
Query: 425 AVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
A ++ RD D +L+ + R G + + +M+ + + P+
Sbjct: 396 AKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPD 446
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 151/315 (47%), Gaps = 3/315 (0%)
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
N++L+ + + + F ++R V LN+++ + SG ++ E M+
Sbjct: 67 NSYLARKSAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQ 126
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
G +V ++++ I K + AL++ + + NV N++++ K GKL
Sbjct: 127 HG-KISVSTYSSCIKFVGAKNV-SKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDS 184
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNC-ETGMRLFEEMGRNQVKPDILTYNALI 343
++F +MK + P+ VTYNTL+ G ++ N + L E+ N ++ D + Y ++
Sbjct: 185 CIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVL 244
Query: 344 LGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYS 403
+G++++A N ++++ + PN +S+L+ + + ++A ++ M SIG
Sbjct: 245 AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLV 304
Query: 404 PNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
PN+ L+ V+ K FD + ++L ++ + L +GLS+ G+ A +
Sbjct: 305 PNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364
Query: 464 CSEMEAKRLLPEGFG 478
+M+ K + +G+
Sbjct: 365 FDDMKGKGVRSDGYA 379
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 143/327 (43%), Gaps = 38/327 (11%)
Query: 164 CNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVI--CAYCKSGDLPRALETL-- 219
CN+ LS L++ + + + + +M+RD + P+V T N ++ C K+G P+A+E +
Sbjct: 169 CNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNG-YPKAIELIGE 227
Query: 220 ---------------------------------EKMKDMGLSPTVVSFNALISGYCNKGL 246
++MK G SP + +++L++ Y KG
Sbjct: 228 LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGD 287
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
A ++ + M + + PN V TL+ + K G + + SE++ A A N + Y
Sbjct: 288 YKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCM 347
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
L++G S+ G E +F++M V+ D + +I LC+ + K+A L ++ +
Sbjct: 348 LMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTY 407
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAV 426
+ + ++ C E ++ + M SP+ +TF +LI F K + A
Sbjct: 408 EKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAY 467
Query: 427 QVLRDMLDRSMTPDSGILSALYNGLSR 453
Q DM + + + S+L L +
Sbjct: 468 QTTLDMHSKGHRLEEELCSSLIYHLGK 494
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 159/374 (42%), Gaps = 23/374 (6%)
Query: 59 FFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCS 118
FFNWV + + +++ + +L R+F+ + ++ V + T + C+
Sbjct: 172 FFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCA 231
Query: 119 YRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAE 178
R C N A F RM + G +P + +A L + + E
Sbjct: 232 KR-C-----------------NLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVE 273
Query: 179 VALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI 238
L+ Y P+ +++ + ++GD L++MK M + P VV +N L+
Sbjct: 274 EVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLL 333
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
G GLA + + M ++PN T L+ + K +A +++ EMK
Sbjct: 334 EAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWP 393
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRN-QVKPDILTYNALILGLCKDGKTKKAAN 357
+ + YNTL+N + IG E RLF +M + Q +PD +Y A++ GK +KA
Sbjct: 394 MDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAME 453
Query: 358 LVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI--GYSPNESTFGMLISV 415
L +E+ K + N + L+ QC+ +Y SI G P++ G L+SV
Sbjct: 454 LFEEMLKAGVQVNVMGCTCLV--QCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSV 511
Query: 416 FCKNEDFDGAVQVL 429
E + A +V+
Sbjct: 512 MALCESSEDAEKVM 525
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 267 VTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
+T++T+I + ++A F M + P+ VTY+ +++ YS+ G E + L+E
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
KPD + ++ L + G +++E+ ++ PN ++ L+
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
A ++ M G +PNE T L+ ++ K A+Q+ +M + D + +
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNT 401
Query: 447 LYNGLSRCGRKRLALELCSEM-EAKRLLPEGF 477
L N + G + A L ++M E+ + P+ F
Sbjct: 402 LLNMCADIGLEEEAERLFNDMKESVQCRPDNF 433
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%)
Query: 326 EMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRN 385
EM ++ V+ D +TY+ +I + KA + + K L+P+ T+SA++
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 386 NSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILS 445
E +Y + G+ P+ F +L +F + D+DG VL++M + P+ + +
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 446 ALYNGLSRCGRKRLALELCSEMEAKRLLP 474
L + R G+ LA L +EM L P
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 177/412 (42%), Gaps = 31/412 (7%)
Query: 63 VHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLC 122
+HNC P T Q + ++ TLA + + + S+L L S +
Sbjct: 65 LHNCEP---TPQAYRFVIKTLAKSSQLENISSVLYH----------------LEVSEKF- 104
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRA-EVAL 181
D+ +F V Y ++ +A F ++ + +P+ + NA L L++ R++ E+
Sbjct: 105 DTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVP 164
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+ R + T ++I A C+ G++ A E + M + ++ L+S
Sbjct: 165 EILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSV 224
Query: 242 CNK------GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVA 295
C ++G ++ R SP + + ++ + G+ E V ++MK
Sbjct: 225 CKHKDSSCFDVIGYLEDLRKT----RFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCD 280
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
V P+ V Y ++ G + +LF+E+ + PD+ TYN I GLCK + A
Sbjct: 281 RVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGA 340
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV 415
++ ++K PN T++ LI + RA +++ M + G + N TF ++IS
Sbjct: 341 LKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISA 400
Query: 416 FCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
+ + ++ A +L + + ++ S + + + L G A+EL + +
Sbjct: 401 YIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 167/410 (40%), Gaps = 65/410 (15%)
Query: 76 HSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRL--CDSSPLVFDAVF 133
HS N K K A LR N+ S + ++ LL S++L C+ +P + V
Sbjct: 22 HSSFKTKWNENLKQKYAMEELRS--NLLTDSENASVMRTLLSSFQLHNCEPTPQAYRFVI 79
Query: 134 KTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCIS 193
KT A ++L + + ++ T ES +R+
Sbjct: 80 KTLAKSSQLENISSVLYHLEVSEKFDTPES-------------------IFRD------- 113
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
VI AY SG + A+E K+ + P+ + NAL LL L K
Sbjct: 114 --------VIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNAL--------LLVLVRKR 157
Query: 254 KSLMGNYRVSPNVV-------------TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
+SL + P ++ TF LI+ C+ G++ A + M +V +
Sbjct: 158 QSL----ELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVD 213
Query: 301 TVTYNTLINGY--SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
Y+ L++ + +C + E++ + + P + Y ++ L + G+ K+ ++
Sbjct: 214 PRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSV 273
Query: 359 VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
+ ++ D + P+ ++ ++ G + +A +++ + +G +P+ T+ + I+ CK
Sbjct: 274 LNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCK 333
Query: 419 NEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
D +GA++++ M P+ + L L + G A L EME
Sbjct: 334 QNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEME 383
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 181/442 (40%), Gaps = 35/442 (7%)
Query: 41 RVKHILLKLKND--DV-LSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHS--- 94
+ +ILL L D D+ +LE++ + T+ TH +LH L + +
Sbjct: 376 KTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTV-THRAVLHILCQRKMVAEVEAVIA 434
Query: 95 ----------------ILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYAN 138
I++ +N + + LF+ C S AV YA
Sbjct: 435 EMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD---CVLSSTTLAAVIDVYAE 491
Query: 139 LNKLRDATHTFLRMKEY-GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVY 197
+A F + G + N + + + + E AL+ ++ M+ P+
Sbjct: 492 KGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDEC 551
Query: 198 TLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM 257
T N + + A L +M D G P ++ A+I+ Y GLL A+ + M
Sbjct: 552 TYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM 611
Query: 258 GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNC 317
V PN V + +LINGF + G + EA + F M+ V N + +LI YS++G
Sbjct: 612 EKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCL 671
Query: 318 ETGMRLFEEMGRNQVKPDILTYNALILGLCKD-GKTKKAANLVKELDKDNL--VPNASTF 374
E R++++M ++ PD+ N++ L LC D G +A ++ L + V + +T
Sbjct: 672 EEARRVYDKMKDSEGGPDVAASNSM-LSLCADLGIVSEAESIFNALREKGTCDVISFATM 730
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML- 433
L G + + A ++ M G + ++F +++ + + ++ +ML
Sbjct: 731 MYLYKGMGMLDE---AIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLV 787
Query: 434 DRSMTPDSGILSALYNGLSRCG 455
+R + D G L+ L + G
Sbjct: 788 ERKLLLDWGTFKTLFTLLKKGG 809
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 157/369 (42%), Gaps = 20/369 (5%)
Query: 104 VASSSNTLFDALLCSYRLCDSSPL--------------VFDAVFKTYANLNKLRDATHTF 149
+ S+ NTL D + RL D++ L F+ + T L +A
Sbjct: 304 LTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLL 363
Query: 150 LRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKS 209
+M+E G P ++ N LS E AL +YR++R+ + P+ T V+ C+
Sbjct: 364 KKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR 423
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVS--PNVV 267
+ + +M + S ++ Y N+GL+ ++ K+L +++ +
Sbjct: 424 KMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLV---VQAKALFERFQLDCVLSST 480
Query: 268 TFNTLINGFCKEGKLHEAYRVF-SEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
T +I+ + ++G EA VF + ++ + + YN +I Y + E + LF+
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
M PD TYN+L L +A ++ E+ P T++A+I
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSA 446
A +Y +M G PNE +G LI+ F ++ + A+Q R M + + + +L++
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 447 LYNGLSRCG 455
L S+ G
Sbjct: 661 LIKAYSKVG 669
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 30/291 (10%)
Query: 194 PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
PNV N+V+ A ++G +M G+ PT ++ L+ Y GL+ AL
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
MG P+ VT T++ F G+ A R F V + + I+ + +
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS----IDDFPK 258
Query: 314 IGNCET--------GMRLFEEMGRNQV---------------KPDIL-TYNALILGLCKD 349
G+ ++ M LF+ RN + KP + T+N LI K
Sbjct: 259 NGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKA 318
Query: 350 GKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
G+ AANL E+ K + + TF+ +I + A + + M G SP+ T+
Sbjct: 319 GRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTY 378
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
+L+S+ D + A++ R + + PD+ A+ + L C RK +A
Sbjct: 379 NILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL--CQRKMVA 427
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 126/315 (40%), Gaps = 41/315 (13%)
Query: 198 TLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM 257
T N +I Y K+G L A +M G+ V+FN +I G L A + M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 258 GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNC 317
+SP+ T+N L++ G + A + +++ + P+TVT+ +++ Q
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 318 ETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSAL 377
+ EM RN ++ D + ++ +G +A L + D V +++T +A+
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD-CVLSSTTLAAV 485
Query: 378 I----------------------TGQCVRNN----------------SERAFQIYRSMTS 399
I +GQ RN+ E+A +++ M +
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQ--RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 400 IGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL 459
G P+E T+ L + + D A ++L +MLD P +A+ R G
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 460 ALELCSEMEAKRLLP 474
A++L ME + P
Sbjct: 604 AVDLYEAMEKTGVKP 618
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 90/232 (38%), Gaps = 20/232 (8%)
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
PNV+ +N ++ + GK E + EM V P TY L++ Y + G + +
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK---------ELDK-DNLVPNAST 373
+ MG+ PD +T ++ G+ +A K +LD D+ N S
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSA 262
Query: 374 FSALITGQCV---------RNNSERAFQIYRSMTSIGYSPN-ESTFGMLISVFCKNEDFD 423
S + Q + RN E++ S P STF LI ++ K +
Sbjct: 263 QSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLN 322
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
A + +ML + D+ + + + G A L +ME K + P+
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPD 374
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 154/351 (43%), Gaps = 26/351 (7%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
F VFK ++ +R GF+ + NA ++ + R A + EM
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMK-DMGLSPTVVSFNALISGYCNKGLL 247
+V + N +I +Y K G ALE +M + G P ++ ++ + G
Sbjct: 190 ----VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
L ++ + N+ N L++ + K G + EA VFS M V +V V++N +
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDV----VSWNAM 301
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
+ GYSQIG E +RLFE+M ++K D++T++A I G + G +A + +++ +
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 368 VPNASTFSALITGQCVRNNS---ERAFQIYRSMTSI-----GYSPNESTFGMLISVFCKN 419
PN T ++++G C + + Y I G+ LI ++ K
Sbjct: 362 KPNEVTLISVLSG-CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 420 EDFDGAVQVLRDMLDRSMTP---DSGILSALYNGLSRCGRKRLALELCSEM 467
+ D A R M D S++P D + + G S+ G ALEL SEM
Sbjct: 421 KKVDTA----RAMFD-SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 153/384 (39%), Gaps = 50/384 (13%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
V + + YA + +A F M + + S NA ++ Q+ R E A+ + +
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMS----VKDVVSWNAMVAGYSQIGRFEDAVRLFEK 320
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
M+ + I +V T + I Y + G AL +M G+ P V+ +++SG + G
Sbjct: 321 MQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGA 380
Query: 247 LGLALKMKSLMGNYRVS--------PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
L ++ Y + N+V N LI+ + K K+ A +F +
Sbjct: 381 LMHGKEIHCYAIKYPIDLRKNGHGDENMV-INQLIDMYAKCKKVDTARAMFDSLSPKE-- 437
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRN--QVKPDILTYN-ALI----LGLCKDGK 351
+ VT+ +I GYSQ G+ + L EM Q +P+ T + AL+ L + GK
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497
Query: 352 TKKAANLVKELDK--------------------------DNLVP-NASTFSALITGQCVR 384
A L + + DN++ N T+++L+TG +
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR-SMTPDSGI 443
E A I+ M IG+ + T +++ + D ++ M ++P
Sbjct: 558 GYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH 617
Query: 444 LSALYNGLSRCGRKRLALELCSEM 467
+ L + L R GR AL L EM
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEM 641
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 166/377 (44%), Gaps = 53/377 (14%)
Query: 71 HTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFD 130
H ++ H ++ L N + ++R + A ++ +FD + S R DSSP ++
Sbjct: 110 HGVRVHHLIPPYLLRN-NLGISSKLVRLYASCGYAEVAHEVFDRM--SKR--DSSPFAWN 164
Query: 131 AVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD 190
++ YA L + DA + +M E G P + L + + ++ A +R++ ++
Sbjct: 165 SLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE 224
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
+VY LN ++ Y K GD+ +A DM VS+N++++GY + GLL A
Sbjct: 225 GFGYDVYVLNALVVMYAKCGDIVKARNVF----DMIPHKDYVSWNSMLTGYLHHGLLHEA 280
Query: 251 LKMKSLMGNYRVSPNVVTF--------------------------------NTLINGFCK 278
L + LM + P+ V N LI + K
Sbjct: 281 LDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSK 340
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
G+L +A +F +M + +TV++N +I+ +S+ N G++ FE+M R KPD +T
Sbjct: 341 RGQLGQACFIFDQM----LERDTVSWNAIISAHSKNSN---GLKYFEQMHRANAKPDGIT 393
Query: 339 YNALILGLCKD-GKTKKAANLVKELDKD-NLVPNASTFSALITGQCVRNNSERAFQIYRS 396
+ + +L LC + G + L + K+ + P ++ ++ E A+ +
Sbjct: 394 FVS-VLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMI-- 450
Query: 397 MTSIGYSPNESTFGMLI 413
+ +G + +G L+
Sbjct: 451 VQEMGLEAGPTVWGALL 467
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 152/368 (41%), Gaps = 52/368 (14%)
Query: 147 HTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC-ISPNVYTLNMVICA 205
H F+ + G P + + N + L +R+ E+AL Y+ + ++P++ T +++
Sbjct: 153 HGFIN--QAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKG 210
Query: 206 YCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK-----GLLGLALKMKSLMG-- 258
+ +L +A+E E M G V ++ L+ G C K G+L L ++K +G
Sbjct: 211 LVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMG-CVKNSDADGVLKLYQELKEKLGGF 269
Query: 259 ---------------------------------NYRVSPNVVTFNTLINGFCKEGKLHEA 285
N +V + + +N ++ + GK EA
Sbjct: 270 VDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEA 329
Query: 286 YRVFSEMKVANVAP-----NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYN 340
++F +K + P N T+N ++NGY G E M +F +MG + PD L++N
Sbjct: 330 LKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFN 389
Query: 341 ALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS-ERAFQIYRSMTS 399
L+ LC + +A L E+++ N+ P+ T+ L+ C + + Y++M
Sbjct: 390 NLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY-GLLMDTCFKEGKIDEGAAYYKTMVE 448
Query: 400 IGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL 459
PN + + L K D A DM+ + D + LS GR
Sbjct: 449 SNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEAGRLDE 507
Query: 460 ALELCSEM 467
L++ EM
Sbjct: 508 MLKIVDEM 515
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 137/293 (46%), Gaps = 10/293 (3%)
Query: 159 PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET 218
PT+ + N L++ L+ + L + + + I+PN+ T N++ AY ALE
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 219 LEKMKDMG-LSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFC 277
+ D L+P++ +F L+ G + L A+++K M + V ++ L+ G
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 278 KEGKLHEAYRVFSEM--KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE-MGRN-QVK 333
K +++ E+ K+ + V Y L+ GY + M +EE +G N +V+
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 334 PDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP-----NASTFSALITGQCVRNNSE 388
+ YN ++ L ++GK +A L + K++ P N TF+ ++ G C E
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFE 367
Query: 389 RAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS 441
A +++R M SP+ +F L++ C NE A ++ +M ++++ PD
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDE 420
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 6/229 (2%)
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISP-----NVYTLNMVICAYCKSGDLPRALETL 219
N L +L + + + AL + ++++ P N+ T N+++ YC G A+E
Sbjct: 314 NYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVF 373
Query: 220 EKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKE 279
+M D SP +SFN L++ C+ LL A K+ M V P+ T+ L++ KE
Sbjct: 374 RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKE 433
Query: 280 GKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTY 339
GK+ E + M +N+ PN YN L + + G + F +M +++K D Y
Sbjct: 434 GKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAY 492
Query: 340 NALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE 388
++ L + G+ + +V E+ D+ V + + + + E
Sbjct: 493 KFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGRE 541
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 53/298 (17%)
Query: 229 PTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLH---EA 285
PT+ + N +++ + G L++ + ++PN++T+N + + K E
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
Y++F + A + P+ T+ L+ G N E M + E+M D + Y+ L++G
Sbjct: 188 YKLF--IDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMG 245
Query: 346 LCKDGKTKKAANLVKELDKD--NLVPNASTFSALITGQCVRNNSERAFQIYRS------- 396
K+ L +EL + V + + L+ G ++ + A + Y
Sbjct: 246 CVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSK 305
Query: 397 --MTSIGY---------------------------------SPNESTFGMLISVFCKNED 421
M+++ Y + N TF ++++ +C
Sbjct: 306 VRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGK 365
Query: 422 FDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRL--ALELCSEMEAKRLLPEGF 477
F+ A++V R M D +PD+ + L N L C + L A +L EME K + P+ +
Sbjct: 366 FEEAMEVFRQMGDFKCSPDTLSFNNLMNQL--CDNELLAEAEKLYGEMEEKNVKPDEY 421
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 157/356 (44%), Gaps = 29/356 (8%)
Query: 137 ANLNKLRDA-THTFLRMKEYGFLPTLESCNAFLSSLLQL-------RRAEVALAFYREMR 188
A +N+LR+ TH +L++ E G L +S NA +S +L E ++M
Sbjct: 354 ALINQLREGNTHAYLKVAE-GVLDE-KSFNASISDYSKLIHIHAKENHIEDVERILKKMS 411
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
++ I P++ T ++ Y KSG+ RA E E +K GL P + A+I GY N G
Sbjct: 412 QNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPK 471
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV-TYNTL 307
L ++ M + + + L+ + + G + A + S M+ A+ P + Y+
Sbjct: 472 LGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLF 531
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL 367
+ Y + G + F+EM + KPD L+ + KA L+ +L+KD +
Sbjct: 532 VEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGI 591
Query: 368 VPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC-----KNEDF 422
T++ L+ E A Q+ ++ +G +P F + +S+ C +NE
Sbjct: 592 EIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAP---PFELQVSLCCMYSGVRNEKK 648
Query: 423 D----GAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
G ++ RD M P+ + + L R G ++ A + MEA++ LP
Sbjct: 649 TLQALGVLEAKRD----QMGPNE--FDKVISALKRGGFEKDARRMYKYMEARKFLP 698
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 140/353 (39%), Gaps = 36/353 (10%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY--------------- 184
N +R++ ++E GF+P+ E + +S L R+ ++ Y
Sbjct: 241 NSIRESETVDGEVEEEGFVPSDEVESRSIS--LPKRKGKLKYKIYGLELSDPKWVEMADK 298
Query: 185 ---REMRRDCISPNVYT----LNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
E D P T L M + GD P L L + ++ L P V + AL
Sbjct: 299 IHEAEEEADWREPKPVTGKCKLVMEKLESLQEGDDPSGL--LAEWAEL-LEPNRVDWIAL 355
Query: 238 ISGYCNKGLLGLALKM-KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
I+ +G LK+ + ++ + ++ ++ LI+ KE + + R+ +M
Sbjct: 356 IN-QLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNG 414
Query: 297 VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAA 356
+ P+ +T L++ YS+ GN E FE + ++PD Y A+ILG GK K
Sbjct: 415 IFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGE 474
Query: 357 NLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP-NESTFGMLISV 415
L+KE+ L + + AL+ ++ A I SM P + + + +
Sbjct: 475 RLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEA 534
Query: 416 FCKNEDFDGAVQVLRDMLDRSMTPDSGILSALY------NGLSRCGRKRLALE 462
+ K D A +M PD ++ L N L + R L LE
Sbjct: 535 YGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLE 587
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/341 (18%), Positives = 133/341 (39%), Gaps = 29/341 (8%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
++ +S L+H A + IL+++ S N +F +L + A
Sbjct: 383 SISDYSKLIHIHAKENHIEDVERILKKM-------SQNGIFPDILTAT-----------A 424
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+ Y+ AT F +K YG P + A + + + ++ +EM+
Sbjct: 425 LVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKE 484
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSP-TVVSFNALISGYCNKGLLGLA 250
+ + ++ AY + GD A M+ P + +++ + Y G + A
Sbjct: 485 LKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKA 544
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
M P+ L+ + E L +A R+ +++ + +TY L++
Sbjct: 545 KSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDW 604
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDI---LTYNALILGLCKDGKTKKAANLVKELDKDNL 367
+ +G E +L ++ + P ++ + G+ + KT +A ++ E +D +
Sbjct: 605 MANLGLIEEAEQLLVKISQLGEAPPFELQVSLCCMYSGVRNEKKTLQALGVL-EAKRDQM 663
Query: 368 VPNA--STFSALITGQCVRNNSERAFQIYRSMTSIGYSPNE 406
PN SAL G ++ A ++Y+ M + + P++
Sbjct: 664 GPNEFDKVISALKRGGFEKD----ARRMYKYMEARKFLPSQ 700
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 144/362 (39%), Gaps = 63/362 (17%)
Query: 31 HPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFK 90
+P S +P RV+ L+ ++D +L+ E F++ H+ +H IL+ L R F
Sbjct: 43 NPKSPIGSPTRVQK-LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYF- 100
Query: 91 TAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPL---VFDAVFKTYANLNKLRDATH 147
L D +L +R PL +F + K YA
Sbjct: 101 -------------------NLIDDVLAKHR-SSGYPLTGEIFTYLIKVYAEAKLPEKVLS 140
Query: 148 TFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYC 207
TF +M E+ F P + N L L+ R
Sbjct: 141 TFYKMLEFNFTPQPKHLNRILDVLVSHR-------------------------------- 168
Query: 208 KSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVV 267
G L +A E + + G+ P S+N L+ +C L +A ++ M V P+V
Sbjct: 169 --GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD 226
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
++ LI GFC++G+++ A + +M P+ TLI G G + G + EEM
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEM 282
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
P N L+ G C GK ++A ++V+ + K+ ++ T+ +I C + S
Sbjct: 283 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDES 342
Query: 388 ER 389
E+
Sbjct: 343 EK 344
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 5/246 (2%)
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC-NKGLLGLALKMKSLMGNY 260
+I Y ++ + L T KM + +P N ++ ++G L A ++ +
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
V PN ++N L+ FC L AY++F +M +V P+ +Y LI G+ + G
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
M L ++M PD LI GLC G + ++E+ P+ S + L+ G
Sbjct: 245 MELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 300
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
C E A + + G + + T+ M+I + C ++ + L D + +T D
Sbjct: 301 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 360
Query: 441 SGILSA 446
+ I+
Sbjct: 361 TRIVDV 366
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 5/202 (2%)
Query: 217 ETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF 276
+ L K + G T F LI Y L L M + +P N +++
Sbjct: 105 DVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVL 164
Query: 277 CK-EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
G L +A+ +F ++ V PNT +YN L+ + + +LF +M V PD
Sbjct: 165 VSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPD 224
Query: 336 ILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYR 395
+ +Y LI G C+ G+ A L+ ++ VP+ + LI G C + + +
Sbjct: 225 VDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRT----LIGGLCDQGMFDEGKKYLE 280
Query: 396 SMTSIGYSPNESTFGMLISVFC 417
M S G+SP+ S L+ FC
Sbjct: 281 EMISKGFSPHFSVSNCLVKGFC 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 384 RNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
R ++AF++++S G PN ++ +L+ FC N+D A Q+ ML+R + PD
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 444 LSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
L G R G+ A+EL +M K +P+
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPD 259
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 350 GKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
G +KA L K ++PN +++ L+ C+ ++ A+Q++ M P+ ++
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYN-GLSRCGRKRL 459
+LI FC+ +GA+++L DML++ PD ++ L + G+ G+K L
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGLCDQGMFDEGKKYL 279
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 140/275 (50%), Gaps = 20/275 (7%)
Query: 112 FDALLCSYRLCDS----SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAF 167
FD L+ ++++ D + ++++ YA L +++ A F M + T+ S A
Sbjct: 157 FDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLD----KTIVSWTAM 212
Query: 168 LSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVI--CAYCKSGDLPRALETLEKMKDM 225
+S + A+ F+REM+ I P+ +L V+ CA S +L + + + +
Sbjct: 213 ISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGF 272
Query: 226 GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
L T V NALI Y G++ A+++ M +V++++T+I+G+ G H A
Sbjct: 273 -LKQTGVC-NALIEMYSKCGVISQAIQLFGQME----GKDVISWSTMISGYAYHGNAHGA 326
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN-QVKPDILTYNALIL 344
F+EM+ A V PN +T+ L++ S +G + G+R F+ M ++ Q++P I Y LI
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
L + GK ++A + K + + P++ + +L++
Sbjct: 387 VLARAGKLERAVEITKTMP---MKPDSKIWGSLLS 418
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 15/278 (5%)
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
+V T N +I Y K DL A + ++M + V+S+N+L+SGY G + A +
Sbjct: 143 HVVTENALIDMYMKFDDLVDAHKVFDEMYE----RDVISWNSLLSGYARLGQMKKAKGLF 198
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
LM + +V++ +I+G+ G EA F EM++A + P+ ++ +++ +Q+
Sbjct: 199 HLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL 254
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G+ E G + R NALI K G +A L +++ +++ ++
Sbjct: 255 GSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVI----SW 310
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML- 433
S +I+G N+ A + + M PN TF L+S + ++ DM+
Sbjct: 311 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYF-DMMR 369
Query: 434 -DRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
D + P L + L+R G+ A+E+ M K
Sbjct: 370 QDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK 407
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 17/286 (5%)
Query: 194 PNVYTLNMVICAYCKSG---DLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
PNV+ N +I AY + D+ R + L + K L P +F + + G L
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLR-KSFEL-PDRFTFPFMFKSCASLGSCYLG 128
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
++ + + +VVT N LI+ + K L +A++VF EM +V +++N+L++G
Sbjct: 129 KQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV----ISWNSLLSG 184
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
Y+++G + LF M + I+++ A+I G G +A + +E+ + P+
Sbjct: 185 YARLGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
+ +++ + E I+ G+ LI ++ K A+Q+
Sbjct: 241 EISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFG 300
Query: 431 DMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEG 476
M + + S ++S G + G A+E +EM+ ++ P G
Sbjct: 301 QMEGKDVISWSTMIS----GYAYHGNAHGAIETFNEMQRAKVKPNG 342
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 119/243 (48%), Gaps = 13/243 (5%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV-------A 180
VF + LN ++ + F +E LP E ++ L L RA +
Sbjct: 107 VFKNLLAAAGELNDMKLSCRVF---REVLILPGKEPLSS--DCYLNLARAFINTDDCTYL 161
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
+ +E+ + + +N +I A+ ++ + + L L++MK+ P V+++N+++
Sbjct: 162 TSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDI 221
Query: 241 YCNKGLLGLALKMKSLMG-NYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
GL+ L + S M + VS N++T+NT++NG K + +++EM + P
Sbjct: 222 LGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEP 281
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+ ++Y +I+ + GN + +RLF+EM + Q++P + Y ALI L K G + A L
Sbjct: 282 DLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLS 341
Query: 360 KEL 362
EL
Sbjct: 342 DEL 344
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
Query: 205 AYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSP 264
A+ + D L+++ + L ++ N +I + + L + M + P
Sbjct: 151 AFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKP 210
Query: 265 NVVTFNTLINGFCKEGKLHEAYRVFSEMKV-ANVAPNTVTYNTLINGYSQIGNCETGMRL 323
+V+T+N++++ + G ++E V S MK +V+ N +TYNT++NG + + + +
Sbjct: 211 DVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVI 270
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
+ EM + ++PD+L+Y A+I L + G K++ L E+ + + P+ + ALI C+
Sbjct: 271 YNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALI--DCL 328
Query: 384 RNNSE 388
+ + +
Sbjct: 329 KKSGD 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 266 VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE 325
++ N +I F + ++ + + EMK P+ +TYN++++ + G + +
Sbjct: 177 LIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLS 236
Query: 326 EMGRN-QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
M + V +I+TYN ++ G+ K + + E+ + + P+ +++A+I
Sbjct: 237 TMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRS 296
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
N + + +++ M P+ + LI K+ DF A+Q+
Sbjct: 297 GNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQL 340
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 6/176 (3%)
Query: 119 YRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAE 178
YRL +V + + +A ++ MKE+ P + + N+ L L +
Sbjct: 175 YRL-----IVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVN 229
Query: 179 VALAFYREMRRDC-ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
L M+ DC +S N+ T N V+ K+ L +M G+ P ++S+ A+
Sbjct: 230 EILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAV 289
Query: 238 ISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
I G + +L++ M ++ P+V + LI+ K G A ++ E+K
Sbjct: 290 IDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 132/279 (47%), Gaps = 1/279 (0%)
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
F +R ++ +V + ++++ A + ++ L+ M G++P + + +
Sbjct: 138 FDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFV 197
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
+ A+++ ++ V + +FN L+ C+ + A VF+ K N+ ++
Sbjct: 198 RVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK-GNIPFDSC 256
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
+YN +I+G+S++G E ++ +EM + PD L+Y+ LI GL + G+ + + +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
VP+A+ ++A+I + + + + YR M PN T+ L+S K
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKV 376
Query: 423 DGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLAL 461
A+++ +ML R + P +G++++ L G A+
Sbjct: 377 SDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAM 415
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 125/305 (40%), Gaps = 12/305 (3%)
Query: 105 ASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESC 164
A N FD+ CSY + + ++ L ++ + M E GF P S
Sbjct: 246 AKKGNIPFDS--CSYNI----------MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSY 293
Query: 165 NAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKD 224
+ + L + R ++ + ++ P+ N +IC + + D ++ +M D
Sbjct: 294 SHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLD 353
Query: 225 MGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHE 284
P + +++ L+SG + AL++ M + V P + + C G H
Sbjct: 354 EECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHA 413
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALIL 344
A ++ + + A + Y L+ S+ G C + +++EM + D+ Y ++
Sbjct: 414 AMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVD 473
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
GLC G + A +++E + PN +S L + N +E A++++ + +
Sbjct: 474 GLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATE 533
Query: 405 NESTF 409
N +F
Sbjct: 534 NARSF 538
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 132/322 (40%), Gaps = 1/322 (0%)
Query: 156 GFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRA 215
G P LE + S +++ A+ + E + + + N ++ C+ + A
Sbjct: 181 GVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVS-A 239
Query: 216 LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLING 275
+++ K + S+N +ISG+ G + K+ M P+ ++++ LI G
Sbjct: 240 AKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEG 299
Query: 276 FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
+ G+++++ +F +K P+ YN +I + + + MR + M + +P+
Sbjct: 300 LGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPN 359
Query: 336 ILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYR 395
+ TY+ L+ GL K K A + +E+ ++P ++ + C A IY+
Sbjct: 360 LETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQ 419
Query: 396 SMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
G +ES + +L+ + + V +M + D + + +GL G
Sbjct: 420 KSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIG 479
Query: 456 RKRLALELCSEMEAKRLLPEGF 477
A+ + E K P F
Sbjct: 480 HLENAVLVMEEAMRKGFCPNRF 501
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 81/147 (55%)
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+ T+++ F + G++ Y VF MK V +TVTY +LI+ S G+ + MRL+EEM
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
N +P +++Y A + L DG+ ++A + KE+ + + PN T++ L+
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLIS 414
E A I+ M IG P+++ +LI+
Sbjct: 244 EEALDIFFKMQEIGVQPDKAACNILIA 270
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 23/292 (7%)
Query: 197 YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
+T ++ + ++G + MK+ G+ V++ +LI + G + A+++
Sbjct: 123 FTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEE 182
Query: 257 MGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGN 316
M + P VV++ + +G++ EA V+ EM + V+PN TY L+ G
Sbjct: 183 MRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGK 242
Query: 317 CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF-S 375
CE + +F +M V+PD N LI K G+T ++ + ++ +V F
Sbjct: 243 CEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVE 302
Query: 376 ALITGQCVRNNSE--RAFQIYRSMTS-----IGYSP--------NESTFGMLISVFCKNE 420
AL T + + + R + S+ S I +P N ++ SV +
Sbjct: 303 ALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLMKQ 362
Query: 421 DFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKR-----LALELCSEM 467
+ +L M DR++ DS ++SA+ + C R R LA + EM
Sbjct: 363 NLVAVDILLNQMRDRNIKLDSFVVSAIIE--TNCDRCRTEGASLAFDYSLEM 412
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/455 (18%), Positives = 171/455 (37%), Gaps = 71/455 (15%)
Query: 59 FFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCS 118
FFNW H T++ +L + ++ +S+ ++ L D +
Sbjct: 108 FFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVF------HLMKEKGVLIDTV--- 158
Query: 119 YRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAE 178
+ ++ ++ + A + M++ G PT+ S A++ L R E
Sbjct: 159 ---------TYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVE 209
Query: 179 VALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI 238
A Y+EM R +SPN +T +++ +G AL+ KM+++G+ P + N LI
Sbjct: 210 EATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYR-VFSEMKVANV 297
+ G ++ M V F + G+ + R V S + V ++
Sbjct: 270 AKALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLREVNSHISVESL 329
Query: 298 -------APNTVTYNTLINGYSQIGNCETGMR--------LFEEMGRNQVKPDILTYNAL 342
P +T + S++ + M+ L +M +K D +A+
Sbjct: 330 CSSDIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAI 389
Query: 343 ILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS-ERAFQIYRSMTSIG 401
I C +T+ A+ + + S + ALI G +R+N + ++ + M
Sbjct: 390 IETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALI-GNFLRSNELPKVIEVVKEMVKAQ 448
Query: 402 YS-----------------------------PNE----STFGMLISVFCKNEDFDGAVQV 428
+S P++ + + L+ V+ + A+++
Sbjct: 449 HSLGCYQGAMLIHRLGFGRRPRLAADVFDLLPDDQKGVAAYTALMDVYISAGSPEKAMKI 508
Query: 429 LRDMLDRSMTPDSGILSALYNGLSRCG--RKRLAL 461
LR+M +R + P G L +GL + +K +AL
Sbjct: 509 LREMREREIMPSLGTYDVLLSGLEKTSDFQKEVAL 543
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 158/389 (40%), Gaps = 59/389 (15%)
Query: 45 ILLKLKN-DDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVN 103
IL +L++ D +++FF+W+ +S++L L ++ A +++
Sbjct: 145 ILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKE----- 199
Query: 104 VASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLES 163
LC + S VF+ V ++ A+ F M E+G
Sbjct: 200 ------------LCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG------- 240
Query: 164 CNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMK 223
+ PNV T+ M++ Y K+ ++ A M+
Sbjct: 241 ----------------------------VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMR 272
Query: 224 DMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLH 283
G+ +++++I+ Y L A ++ LM RV + + ++N + ++GK+
Sbjct: 273 KFGIVCES-AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKME 331
Query: 284 EAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALI 343
A + M+ A +PN + YNTLI GY +I E LF + ++PD +Y ++I
Sbjct: 332 LAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMI 391
Query: 344 LGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIG-- 401
G + ++A + +EL + PN+ LI Q + + A + MT IG
Sbjct: 392 EGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQ 451
Query: 402 YSPNESTFGMLISVFCKNEDFDGAVQVLR 430
YS S G+++ + K D VL+
Sbjct: 452 YS---SILGIILQAYEKVGKIDVVPCVLK 477
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 126/262 (48%), Gaps = 5/262 (1%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
+F + + Y + H + R+++ G E N ++ + + + EM
Sbjct: 631 LFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEM 690
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC-NKGL 246
R +PN T N+++ Y K+ + E K G+ V+S+N +I+ Y NK
Sbjct: 691 IRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVD-VISYNTIIAAYGKNKDY 749
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
++ +K++ + S ++ +NTL++ + K+ ++ + + MK + P+ TYN
Sbjct: 750 TNMSSAIKNMQFD-GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 808
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
+IN Y + G + + +E+ + + PD+ +YN LI G ++A LVKE+ N
Sbjct: 809 MINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRN 868
Query: 367 LVPNASTFSALITGQCVRNNSE 388
++P+ T++ L+T +R N E
Sbjct: 869 IIPDKVTYTNLVTA--LRRNDE 888
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 121/309 (39%), Gaps = 37/309 (11%)
Query: 160 TLESCNAFLSSLLQLRRAEVALAFYREMR-RDCISPNVYTLNMVICAYCKSGDLPRALET 218
+LE CN L L A+ F+ MR + N ++++ + + RA +
Sbjct: 138 SLEHCNGILKRLESCSDTN-AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDL 196
Query: 219 LEKMKDM-GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFC 277
++++ + FN +I KG + LA K +M + V PNV T L+ +
Sbjct: 197 IKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQ 256
Query: 278 KEGKLHEAYRVFSEMKVANVAPNTV----------------------------------T 303
K + EA FS M+ + +
Sbjct: 257 KNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLEN 316
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
+ ++N YSQ G E + M P+I+ YN LI G K K + A L L
Sbjct: 317 WLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLC 376
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
L P+ +++ ++I G +N E A Y+ + GY PN LI++ K D D
Sbjct: 377 NIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRD 436
Query: 424 GAVQVLRDM 432
GA++ + DM
Sbjct: 437 GAIKTIEDM 445
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 1/245 (0%)
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
Y +R+ I N N VI ++ L T E+M G +P V+FN L+ Y
Sbjct: 651 LYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYG 710
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
L ++ L + V +V+++NT+I + K M+ + +
Sbjct: 711 KAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLE 769
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
YNTL++ Y + E + + M ++ PD TYN +I + G + A+++KEL
Sbjct: 770 AYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKEL 829
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
+ L P+ +++ LI + E A + + M P++ T+ L++ +N++F
Sbjct: 830 KESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEF 889
Query: 423 DGAVQ 427
A++
Sbjct: 890 LEAIK 894
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 16/285 (5%)
Query: 199 LNMVICAYCKSGDLPRA---LETLEKMKDMGLSPTVVSFNALISGY--CNKGLLGLALKM 253
++V+ Y K+G L A LE +++ KD + P V F ++ Y C+ L K+
Sbjct: 596 FSIVVRMYVKAGSLEEACSVLEIMDEQKD--IVPDVYLFRDMLRIYQKCD-----LQDKL 648
Query: 254 KSLMGNYRVSP---NVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
+ L R S N +N +IN + L E F EM PNTVT+N L++
Sbjct: 649 QHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDV 708
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
Y + + LF R+ V D+++YN +I K+ ++ +K + D +
Sbjct: 709 YGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVS 767
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
++ L+ E+ I + M P+ T+ ++I+++ + D VL+
Sbjct: 768 LEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLK 827
Query: 431 DMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
++ + + PD + L G A+ L EM + ++P+
Sbjct: 828 ELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPD 872
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
++ + Y + + M+ GF +LE+ N L + + ++ E + + M+
Sbjct: 736 YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK 795
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
+ P+ YT N++I Y + G + + L+++K+ GL P + S+N LI Y G++
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVE 855
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMK 293
A+ + M + P+ VT+ L+ + + EA + MK
Sbjct: 856 EAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMK 900
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 160/401 (39%), Gaps = 82/401 (20%)
Query: 99 IINVNVASSSNTLFDALLCSYRLCDSSP--LVFDAVFKTYANLNKLRDATHTFLRMKEYG 156
++N L +++L S SP + ++ + Y + K+ A F R+ G
Sbjct: 320 MLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIG 379
Query: 157 FLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRAL 216
P S + + + E A +Y+E++R PN + L +I K GD A+
Sbjct: 380 LEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAI 439
Query: 217 ETLEKMKDMG---------------------LSPTVV-------------SFNALISGYC 242
+T+E M +G + P V+ SF++L+ Y
Sbjct: 440 KTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYV 499
Query: 243 NKGL----LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKE-GKLHEAYRVFSEMKVANV 297
G+ LGL + K +R S L+ CKE G+L +A ++++ ++
Sbjct: 500 KHGMVDDCLGLLREKK-----WRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDE 554
Query: 298 APNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAAN 357
N +T+I+ Y+ +G +L+ + + V D + ++ ++ K G ++A +
Sbjct: 555 EINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACS 614
Query: 358 LVKELDKD-NLVPNASTFSALI---------------------TG--------QCVRNNS 387
+++ +D+ ++VP+ F ++ +G CV N
Sbjct: 615 VLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCC 674
Query: 388 ERAFQI------YRSMTSIGYSPNESTFGMLISVFCKNEDF 422
RA + + M G++PN TF +L+ V+ K + F
Sbjct: 675 ARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLF 715
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 87/225 (38%), Gaps = 1/225 (0%)
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
+K L G + + FNT+I K+G + A + F M V PN T L+ Y
Sbjct: 197 IKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQ 256
Query: 313 QIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
+ N E F M + + + Y+++I + KA ++ + +D +
Sbjct: 257 KNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLE 315
Query: 373 TFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
+ ++ + E A I SM + G+SPN + LI+ + K + A + +
Sbjct: 316 NWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRL 375
Query: 433 LDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ + PD ++ G R A E++ P F
Sbjct: 376 CNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSF 420
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 95/241 (39%), Gaps = 4/241 (1%)
Query: 121 LCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVA 180
+C+S+ + ++ Y L A MK+ LE+ L++ Q + E+A
Sbjct: 277 VCESA---YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELA 333
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
+ M SPN+ N +I Y K + A ++ ++GL P S+ ++I G
Sbjct: 334 ESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEG 393
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
+ A + PN TLIN K G A + +M +
Sbjct: 394 WGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS 453
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
++ ++ Y ++G + + + N ++ + ++++L++ K G L++
Sbjct: 454 SIL-GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLR 512
Query: 361 E 361
E
Sbjct: 513 E 513
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 177/410 (43%), Gaps = 34/410 (8%)
Query: 64 HNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINV------NVASSSNTLFDA--- 114
H C S T+ +L A+ R H IL ++ + +V ++S +F +
Sbjct: 147 HGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGD 206
Query: 115 LLCSYRLCDSSPL----VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSS 170
+ + ++ D SP+ ++ + Y + + A + + M+ G P + +SS
Sbjct: 207 MENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSS 266
Query: 171 LLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT 230
L FY ++ + + + +N ++ + K GD+ A + ++ T
Sbjct: 267 CSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE----KRT 322
Query: 231 VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS 290
+VS+ +ISGY GLL ++ K+ M +VV +N +I G + + +A +F
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDMEE----KDVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
EM+ +N P+ +T ++ SQ+G + G+ + + + + ++ +L+ K G
Sbjct: 379 EMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG 438
Query: 351 KTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFG 410
+A ++ + N+ T++A+I G + ++ A + M G +P+E TF
Sbjct: 439 NISEALSVFHGIQ----TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFI 494
Query: 411 MLISVFCKNEDFDGAVQVLRDMLDR-----SMTPDSGILSALYNGLSRCG 455
L+S C G +Q RD + ++ P S + + L R G
Sbjct: 495 GLLSACCHG----GMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAG 540
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 27/226 (11%)
Query: 265 NVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLF 324
++V++N LING+ K G+ +A V+ M+ V P+ VT L++ S +G+ G +
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS--------- 375
E + N ++ I NAL+ K G +A + L+K +V + S
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 376 ------------------ALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFC 417
A+I G + A +++ M + P+E T +S
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 418 KNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
+ D + + R + S++ + + ++L + ++CG AL +
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV 446
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 146/334 (43%), Gaps = 27/334 (8%)
Query: 144 DATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVI 203
++TH+F+ L LE C LL L++ + + + + P + +
Sbjct: 45 NSTHSFVLHNP--LLSLLEKCKL----LLHLKQIQAQMIINGLI----LDPFASSRLIAF 94
Query: 204 CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC---NKGLLGLALKMKSLMGNY 260
CA +S L +++ L+ +++ P + S+N I G+ N L K G
Sbjct: 95 CALSESRYLDYSVKILKGIEN----PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCC 150
Query: 261 RVSPNVVTFNTLINGFCKEGKLHE-AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET 319
P+ T+ L C + +L + + + + + +N I+ ++ G+ E
Sbjct: 151 ESRPDHFTYPVLFK-VCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMEN 209
Query: 320 GMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALIT 379
++F+E + V+ D++++N LI G K G+ +KA + K ++ + + P+ T L++
Sbjct: 210 ARKVFDE---SPVR-DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVS 265
Query: 380 GQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
+ + R + Y + G L+ +F K D A ++ ++ R++
Sbjct: 266 SCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVS 325
Query: 440 DSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
+ ++S G +RCG ++ +L +ME K ++
Sbjct: 326 WTTMIS----GYARCGLLDVSRKLFDDMEEKDVV 355
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 142/335 (42%)
Query: 121 LCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVA 180
L S ++ V + A + +A MK+ G + E + + + + R +
Sbjct: 243 LAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVIT 302
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
++E + + V+ Y + G++ LE + M+ L T A+++G
Sbjct: 303 EKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNG 362
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
+ + A+K+ VT+ IN +C+ K ++A +F EM
Sbjct: 363 FSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKC 422
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
V Y+ +++ Y + +RL +M + KP+I YN+LI + ++A + K
Sbjct: 423 VVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWK 482
Query: 361 ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNE 420
E+ + ++P+ +++++I+ ER ++Y+ + + G+++ VF K
Sbjct: 483 EMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTS 542
Query: 421 DFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
D +++L+DM D+ + S+ N L G
Sbjct: 543 RIDELMRLLQDMKVEGTRLDARLYSSALNALRDAG 577
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/408 (19%), Positives = 158/408 (38%), Gaps = 34/408 (8%)
Query: 74 QTHSILLHTLANNRKFKTAH---SILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFD 130
QT S L+ + +RKF+ H S+ R ++ V++S D
Sbjct: 140 QTCSNLIRSCIRDRKFRITHCLLSVFRSDKSLAVSAS----------------------D 177
Query: 131 AVFKTYANLNKLRDATHTFLRMKE-YGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRR 189
A K + L F R+K+ G P+ + + ++ + ++E +
Sbjct: 178 AAMKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKS 237
Query: 190 DCIS------PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
+S ++YT+ V + KSG ALE LE+MKD G+ + ++ LI +
Sbjct: 238 QRLSFLAKESGSIYTI--VCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAE 295
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
+ + K+ G ++ + ++ + +EG + V + M+ A +
Sbjct: 296 AREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCI 355
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
++NG+S+ ++++E + + + +TY I C+ K KA L E+
Sbjct: 356 LCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMV 415
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFD 423
K +S ++ A ++ M G PN + LI + + D
Sbjct: 416 KKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLR 475
Query: 424 GAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR 471
A ++ ++M + PD +++ + +R +EL E R
Sbjct: 476 RAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNR 523
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/289 (16%), Positives = 120/289 (41%), Gaps = 6/289 (2%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD 211
++E+ LP ++C+ + S ++ R+ + R D S V + + + K
Sbjct: 130 LREHKALPDGQTCSNLIRSCIRDRKFRITHCLLSVFRSD-KSLAVSASDAAMKGFNKLQM 188
Query: 212 LPRALETLEKMKD-MGLSPTVVSFNALISGYCNKG----LLGLALKMKSLMGNYRVSPNV 266
++ +++K +G+ P+ + ++ + G ++ L + KS ++ +
Sbjct: 189 YSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESG 248
Query: 267 VTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEE 326
+ + + K G+ EA V EMK + ++ Y+ LI +++ +LF+E
Sbjct: 249 SIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKE 308
Query: 327 MGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNN 386
G ++ D ++L ++G + +V + K L A++ G +
Sbjct: 309 AGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 387 SERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
A ++Y + T+ + I+ +C+ E ++ A + +M+ +
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKK 417
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
N+Y+ N ++ Y KSG L RA + M + VVS+N ++ GY G L AL
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
+ N +F L+ K +L + ++ VA N V ++I+ Y++
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G E+ R F+EM VK DI + LI G K G + A L E+ + N V ++
Sbjct: 228 GQMESAKRCFDEM---TVK-DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPV----SW 279
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD 434
+ALI G + + RA ++R M ++G P + TF + ++ M+
Sbjct: 280 TALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIR 339
Query: 435 RSMTPDSGILSALYNGLSRCG 455
++ P++ ++S+L + S+ G
Sbjct: 340 TNVRPNAIVISSLIDMYSKSG 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 114/265 (43%), Gaps = 20/265 (7%)
Query: 113 DALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLP---TLESCNAFLS 169
+ L C + + +P+ + A+ Y A F +M G P T SC +
Sbjct: 265 EKLFCE--MPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASA 322
Query: 170 SLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSP 229
S+ LR + + M R + PN ++ +I Y KSG L + D
Sbjct: 323 SIASLRHGKEIHGY---MIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD---KH 376
Query: 230 TVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVF 289
V +N +IS GL AL+M M +RV PN T ++N G + E R F
Sbjct: 377 DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWF 436
Query: 290 SEMKVAN-VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
M V + + P+ Y LI+ + G + MR EEM +PD +NA ILG+C+
Sbjct: 437 ESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM---PFEPDKHIWNA-ILGVCR 492
Query: 349 ----DGKTKKAANLVKELDKDNLVP 369
+ KKAA+ + +LD ++ P
Sbjct: 493 IHGNEELGKKAADELIKLDPESSAP 517
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 11/254 (4%)
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
+++ +I Y K GD+ A + +M + VS+ ALI+GY +G AL +
Sbjct: 244 DIHIWTTLISGYAKLGDMEAAEKLFCEMPE----KNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
M V P TF++ + L + M NV PN + ++LI+ YS+
Sbjct: 300 RKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKS 359
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G+ E R+F K D + +N +I L + G KA ++ ++ K + PN +T
Sbjct: 360 GSLEASERVFRICDD---KHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTL 416
Query: 375 SALITGQCVRNNSERAFQIYRSMT-SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
++ E + + SMT G P++ + LI + + F +++R +
Sbjct: 417 VVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK---ELMRKIE 473
Query: 434 DRSMTPDSGILSAL 447
+ PD I +A+
Sbjct: 474 EMPFEPDKHIWNAI 487
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 264 PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
PN + N LI + K GK +A +VF +M + N+ ++N +++GY + G +
Sbjct: 80 PNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNL----YSWNNMVSGYVKSGMLVRARVV 135
Query: 324 FEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
F+ M D++++N +++G +DG +A KE + + N +F+ L+T CV
Sbjct: 136 FDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTA-CV 190
Query: 384 RNNSERAFQIYR----SMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTP 439
++ R Q+ R + G+ N +I + K G ++ + D
Sbjct: 191 KS---RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC----GQMESAKRCFDEMTVK 243
Query: 440 DSGILSALYNGLSRCGRKRLALELCSEMEAK 470
D I + L +G ++ G A +L EM K
Sbjct: 244 DIHIWTTLISGYAKLGDMEAAEKLFCEMPEK 274
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 139/324 (42%), Gaps = 26/324 (8%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
++ A+ YA+ L A F MKE GFL N L+ ++ + + REM
Sbjct: 141 LYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREM 200
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM-----KDMGLSPTVVSFNALISGYC 242
+ + P+++T+N + AY D +E +EK D GL ++ +GY
Sbjct: 201 EDETVKPDIFTVNTRLHAYSVVSD----VEGMEKFLMRCEADQGLHLDWRTYADTANGYI 256
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVV-------TFNTLINGFCKEGKLHEAYRVFSEMKVA 295
GL AL+M R S +V + L++ + GK E YR++S K
Sbjct: 257 KAGLTEKALEM------LRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL 310
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
+ NT Y ++I+ ++ + E ++ EE DI + LI G CK G +KA
Sbjct: 311 DGFYNT-GYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKA 369
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI---GYSPNESTFGML 412
+V L + V + ST+ L G + E+A + ++ + G+ P++
Sbjct: 370 EEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSC 429
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRS 436
+ D +G ++LR + +R
Sbjct: 430 VDYLEGQRDMEGLRKILRLLSERG 453
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 139/323 (43%), Gaps = 15/323 (4%)
Query: 143 RDATHTFLRMKE--YGFLP--TLESCNAFLSSLLQLRRAEVALAFYREMRRD-CISPNV- 196
R+AT + + K+ LP LES + +++L R E A+ + +R PNV
Sbjct: 96 REATKSIIEKKKGSKKLLPRTVLESLHERITAL----RWESAIQVFELLREQLWYKPNVG 151
Query: 197 -YTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-K 254
Y +V+ CK + +A E ++M + G + AL+S Y G A + +
Sbjct: 152 IYVKLIVMLGKCKQPE--KAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLE 209
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
+ ++ P+V T++ LI F + + + S+M+ + PNT+TYNTLI+ Y +
Sbjct: 210 RMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKA 269
Query: 315 GN-CETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
E L + +G + KPD T N+ + +G+ + N ++ + PN T
Sbjct: 270 KMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRT 329
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
F+ L+ N ++ + M YS T+ ++I F + D + R M
Sbjct: 330 FNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQ 389
Query: 434 DRSMTPDSGILSALYNGLSRCGR 456
+ P L +L R +
Sbjct: 390 SERIFPSCVTLCSLVRAYGRASK 412
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 30/307 (9%)
Query: 57 LEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSIL----RRIINVNVASSSNTLF 112
LE HNC P H T+SIL+ + F +L R+ I N + NTL
Sbjct: 208 LERMKSSHNCQPDVH---TYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTI-TYNTLI 263
Query: 113 DALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRM-KEYGFLPTLESCNAFLSSL 171
DA Y + T ++M E P + N+ L +
Sbjct: 264 DA---------------------YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 302
Query: 172 LQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTV 231
+ E+ Y + + I PN+ T N+++ +Y KSG+ + +E M+ S T+
Sbjct: 303 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 362
Query: 232 VSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSE 291
V++N +I + G L + LM + R+ P+ VT +L+ + + K + V
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF 422
Query: 292 MKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
++ +++ + V +N L++ Y ++ + E M + KPD +TY ++ G
Sbjct: 423 IENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGM 482
Query: 352 TKKAANL 358
T L
Sbjct: 483 TTHVKEL 489
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 124/312 (39%), Gaps = 39/312 (12%)
Query: 128 VFDAVFKTYANLNKLRDATHTFL-RMKE-YGFLPTLESCNAFLSSLLQLRRAEVALAFYR 185
V+ A+ Y+ + DA T L RMK + P + + + + S LQ+ +
Sbjct: 187 VYTALVSAYSRSGRF-DAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLS 245
Query: 186 EMRRDCISPNVYTLNMVICAYCKS------------------------------------ 209
+MRR I PN T N +I AY K+
Sbjct: 246 DMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGN 305
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF 269
G + EK + G+ P + +FN L+ Y G + M Y S +VT+
Sbjct: 306 GQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTY 365
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
N +I+ F + G L + +F M+ + P+ VT +L+ Y + + + +
Sbjct: 366 NVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIEN 425
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
+ ++ D++ +N L+ + K + +++ ++K P+ T+ ++ + +
Sbjct: 426 SDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTH 485
Query: 390 AFQIYRSMTSIG 401
+++ + S+G
Sbjct: 486 VKELHGVVESVG 497
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 157/350 (44%), Gaps = 19/350 (5%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
+S V + + YA +LRD F RM ++ L S N+ + + + A++
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRM----YVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLP--RALETLEKMKDMGLSPTVVSFNALISG 240
++EMR I P+ TL + + GD+ R+++ K L + NA++
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG-NAVVVM 393
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM-KVANVAP 299
Y GL+ A + + + N +V+++NT+I+G+ + G EA +++ M + +A
Sbjct: 394 YAKLGLVDSARAVFNWLPN----TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
N T+ +++ SQ G GM+L + +N + D+ +L K G+ + A +L
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
++ + N VP ++ LI + E+A +++ M G P+ TF L+S C +
Sbjct: 510 YQIPRVNSVP----WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA-CSH 564
Query: 420 EDFDGAVQVLRDML--DRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
Q +M+ D +TP + + R G+ AL+ M
Sbjct: 565 SGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 26/278 (9%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLE--SCNAFLSSLLQLRRAEVALAFYR 185
+ +AV YA L + A F +LP + S N +S Q A A+ Y
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVF------NWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 186 EMRRDC-ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK 244
M + I+ N T V+ A ++G L + ++ ++ GL V +L Y
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499
Query: 245 GLLGLALKMKSLMGNYRVS-PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
G L AL + Y++ N V +NTLI G +A +F EM V P+ +T
Sbjct: 500 GRLEDALSL-----FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHIT 554
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQ-VKPDILTYNALILGLCKDGKTKKAANLVKEL 362
+ TL++ S G + G FE M + + P + Y ++ + G+ + A +K +
Sbjct: 555 FVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614
Query: 363 DKDNLVPNASTFSALITGQCVRNN-------SERAFQI 393
+L P+AS + AL++ V N SE F++
Sbjct: 615 ---SLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 130/308 (42%), Gaps = 20/308 (6%)
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
+ S NA +S Q A+ AL +R + + T+ ++ A ++GD R +
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHS 271
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
GL + N LI Y G L K+ M +++++N++I +
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM----YVRDLISWNSIIKAYELNE 327
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCET--GMRLFEEMGRNQVKPDILT 338
+ A +F EM+++ + P+ +T +L + SQ+G+ ++ F + + DI
Sbjct: 328 QPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGF-TLRKGWFLEDITI 386
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS--ALITGQCVRNNSERAFQIYRS 396
NA+++ K G A + N +PN S +I+G + A ++Y
Sbjct: 387 GNAVVVMYAKLGLVDSARAVF------NWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 397 MTSIG-YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCG 455
M G + N+ T+ ++ + +++ +L + D ++++L + +CG
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 456 RKRLALEL 463
R AL L
Sbjct: 501 RLEDALSL 508
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 125/304 (41%), Gaps = 42/304 (13%)
Query: 181 LAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
L ++++ CIS + L YC G++ A T + +++ V ++N +ISG
Sbjct: 77 LVVSKQIQNVCISAKLVNL------YCYLGNVALARHTFDHIQN----RDVYAWNLMISG 126
Query: 241 YCNKG-------LLGLALKMKSLMGNYRVSPNVV-TFNTLINGFCKEGKLHEAYRVFSEM 292
Y G L + L +YR P+V+ T+I+G K+H F M
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDG----NKIHCLALKFGFM 182
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
VA + + L + Y +GN LF+EM D+ ++NA+I G C+ G
Sbjct: 183 WDVYVAASLIH---LYSRYKAVGNARI---LFDEMPVR----DMGSWNAMISGYCQSGNA 232
Query: 353 KKAANLVKELDKDNLVPNASTFSALI-TGQCVRNNSERAFQIYRSMTSIGYSPNESTFGM 411
K+A L L + V S SA G R + ++ I + S + N+
Sbjct: 233 KEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK----- 287
Query: 412 LISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKR 471
LI ++ + +V M R + + I+ A Y + R A+ L EM R
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA-YELNEQPLR---AISLFQEMRLSR 343
Query: 472 LLPE 475
+ P+
Sbjct: 344 IQPD 347
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 154/385 (40%), Gaps = 54/385 (14%)
Query: 73 LQTHSILLHTLANNRKFKTAHSILRRIINVNVASSS---------NTLFDALLCSYRLCD 123
++ S++L NNRK + A I N S + +A YR+
Sbjct: 177 VKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFA 236
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
++++ + YA DA F M+ G+ P + ++ LS+ Q R +V
Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
+ + I N + N +I Y K GDL A E
Sbjct: 297 HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFE----------------------- 333
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
++ ++S V N++I+ GK EA +FS M+ ++ P+ +T
Sbjct: 334 ------SISVRS----------VACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEIT 377
Query: 304 YNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELD 363
+ ++ G G+++F EM VKP++ + LI L + GK K+A LVKE+
Sbjct: 378 FIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM- 436
Query: 364 KDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV---FCKNE 420
++ PN + AL+ V ++E A Q+ + + + G N + L S+ + E
Sbjct: 437 --HVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTE 494
Query: 421 DFDGAVQVLRDMLDRSMTPDSGILS 445
+ A + +M R + G+ S
Sbjct: 495 RWQTAEALRVEMEKRGLEKSPGLSS 519
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 19/287 (6%)
Query: 180 ALAFYREMRRDCIS-PNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI 238
AL Y +RR + P L + CA + L E +K G+ V+ ++LI
Sbjct: 30 ALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK-FGVCSDVMVGSSLI 88
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
S Y G + A K+ M NV T+N +I G+ G A +F E+ V
Sbjct: 89 SMYGKCGCVVSARKVFDEMPE----RNVATWNAMIGGYMSNGDAVLASGLFEEISVCR-- 142
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
NTVT+ +I GY + E LFE M ++ ++ ++ + K + A
Sbjct: 143 -NTVTWIEMIKGYGKRIEIEKARELFERMPFEL--KNVKAWSVMLGVYVNNRKMEDARKF 199
Query: 359 VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
+++ + NA +S +++G + A I+ + ++ + + LI+ + +
Sbjct: 200 FEDIPE----KNAFVWSLMMSGYFRIGDVHEARAIFYRV----FARDLVIWNTLIAGYAQ 251
Query: 419 NEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCS 465
N D A+ +M PD+ +S++ + ++ GR + E+ S
Sbjct: 252 NGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHS 298
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 139/324 (42%), Gaps = 26/324 (8%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
++ A+ YA+ L A F MKE GFL N L+ ++ + + REM
Sbjct: 46 LYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREM 105
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM-----KDMGLSPTVVSFNALISGYC 242
+ + P+++T+N + AY D +E +EK D GL ++ +GY
Sbjct: 106 EDETVKPDIFTVNTRLHAYSVVSD----VEGMEKFLMRCEADQGLHLDWRTYADTANGYI 161
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVV-------TFNTLINGFCKEGKLHEAYRVFSEMKVA 295
GL AL+M R S +V + L++ + GK E YR++S K
Sbjct: 162 KAGLTEKALEM------LRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL 215
Query: 296 NVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKA 355
+ NT Y ++I+ ++ + E ++ EE DI + LI G CK G +KA
Sbjct: 216 DGFYNT-GYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKA 274
Query: 356 ANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI---GYSPNESTFGML 412
+V L + V + ST+ L G + E+A + ++ + G+ P++
Sbjct: 275 EEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSC 334
Query: 413 ISVFCKNEDFDGAVQVLRDMLDRS 436
+ D +G ++LR + +R
Sbjct: 335 VDYLEGQRDMEGLRKILRLLSERG 358
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 40/274 (14%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM- 187
+ + ++Y + A TF +M +YG + S NA L++ L + + + E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 188 -RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
R + I P+ + ++I +YC SG +A+E + +M+ G+ T ++F ++S KG
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 247 LGLA-------------------------------LKMKSL---MGNYRVSPNVVTFNTL 272
L +A ++K L M + + P+ +++N L
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYL 284
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING--YSQIGNCETGMRLFEEMGRN 330
+ +C+ G L EA +V+ ++ N APN T+ TLI YS++ E G +F++
Sbjct: 285 MTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRL--YEQGYAIFKKSVYM 342
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDK 364
PD T L++GL ++ K A L++ + K
Sbjct: 343 HKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKK 376
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 115/253 (45%), Gaps = 5/253 (1%)
Query: 202 VICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC--NKGLLGLALKMKSLMGN 259
+I +Y ++ A+ T E+M G + VSFNAL++ C +K + +
Sbjct: 108 LIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNA-CLHSKNFDKVPQLFDEIPQR 166
Query: 260 Y-RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCE 318
Y ++ P+ +++ LI +C G +A + +M+ + T+ + T+++ + G E
Sbjct: 167 YNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELE 226
Query: 319 TGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALI 378
L+ EM + + D YN I+ K+ ++ L++E+ L P+ +++ L+
Sbjct: 227 VADNLWNEMVKKGCELDNAAYNVRIMSAQKES-PERVKELIEEMSSMGLKPDTISYNYLM 285
Query: 379 TGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMT 438
T C R + A ++Y + +PN +TF LI C + ++ + + +
Sbjct: 286 TAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKI 345
Query: 439 PDSGILSALYNGL 451
PD L L GL
Sbjct: 346 PDFNTLKHLVVGL 358
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 5/202 (2%)
Query: 111 LFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSS 170
LFD + Y + + + K+Y + A +M+ G T + LSS
Sbjct: 159 LFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 218
Query: 171 LLQLRRAEVALAFYREM-RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSP 229
L + EVA + EM ++ C N ++ A +S + R E +E+M MGL P
Sbjct: 219 LYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPE--RVKELIEEMSSMGLKP 276
Query: 230 TVVSFNALISGYCNKGLLGLALKM-KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRV 288
+S+N L++ YC +G+L A K+ + L GN +PN TF TLI C + Y +
Sbjct: 277 DTISYNYLMTAYCERGMLDEAKKVYEGLEGN-NCAPNAATFRTLIFHLCYSRLYEQGYAI 335
Query: 289 FSEMKVANVAPNTVTYNTLING 310
F + + P+ T L+ G
Sbjct: 336 FKKSVYMHKIPDFNTLKHLVVG 357
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 148/314 (47%), Gaps = 35/314 (11%)
Query: 164 CNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMK 223
CN LS RR + A RE+ SP+V +I Y +S L AL ++M
Sbjct: 43 CNHLLS-----RRIDEA----REVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMP 93
Query: 224 DMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLH 283
VVS+N++ISG G + A+K+ M +VV++ ++NG + GK+
Sbjct: 94 ----VRDVVSWNSMISGCVECGDMNTAVKLFDEMPE----RSVVSWTAMVNGCFRSGKVD 145
Query: 284 EAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM-GRNQVKPDILTYNAL 342
+A R+F +M V +T +N++++GY Q G + ++LF++M G+N ++++ +
Sbjct: 146 QAERLFYQMPV----KDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKN-----VISWTTM 196
Query: 343 ILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
I GL ++ ++ +A +L K + + + + F+ +IT Q++ + +G+
Sbjct: 197 ICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGF 256
Query: 403 SPNESTFGMLISVF--CKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
E LI+ + CK + R + D + + +AL +G S + A
Sbjct: 257 LYEEYVSASLITFYANCKR------IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDA 310
Query: 461 LELCSEMEAKRLLP 474
L + S M +LP
Sbjct: 311 LSIFSGMLRNSILP 324
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 145/358 (40%), Gaps = 22/358 (6%)
Query: 119 YRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAE 178
Y++ ++++ Y K+ DA F +M + S + L Q R+
Sbjct: 152 YQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVI----SWTTMICGLDQNERSG 207
Query: 179 VALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALI 238
AL ++ M R CI VI A + ++ + +G +LI
Sbjct: 208 EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLI 267
Query: 239 SGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
+ Y N +G + K+ + +V V + L++G+ K +A +FS M ++
Sbjct: 268 TFYANCKRIGDSRKV----FDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSIL 323
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANL 358
PN T+ + +N S +G + G + + ++ D N+L++ G A ++
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 359 VKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
++ K ++V +++++I G + AF I+ M + P+E TF L+S
Sbjct: 384 FIKIFKKSIV----SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSH 439
Query: 419 NEDFDGAVQVLRDM------LDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAK 470
+ ++ M +DR + + + + L RCG+ + A EL M K
Sbjct: 440 CGFLEKGRKLFYYMSSGINHIDRKIQH----YTCMVDILGRCGKLKEAEELIERMVVK 493
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 183/436 (41%), Gaps = 50/436 (11%)
Query: 74 QTHSI-LLHTLANNRKFKTAHS-ILRR-IINVNVAS---SSNTLF---DALLCSYRLCDS 124
++H I L+H + + H+ ILRR +++ VA+ S ++L D L +R +
Sbjct: 29 ESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEE 88
Query: 125 -SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
+P V +A+ + + + F+ M G P + L S +L + A
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE----------------------K 221
+ ++ + + + ++ Y K+G L A + E +
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCR 208
Query: 222 MKDMGLSPTVV---------SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTL 272
KDM ++ T+ S++ LI GY + G L A ++ LM NVV++ TL
Sbjct: 209 AKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE----KNVVSWTTL 264
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQV 332
INGF + G A + EM + PN T +++ S+ G +G+R+ + N +
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ 392
K D AL+ K G+ AA + ++ +++ +++A+I G V +A Q
Sbjct: 325 KLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDIL----SWTAMIQGWAVHGRFHQAIQ 380
Query: 393 IYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM-LDRSMTPDSGILSALYNGL 451
+R M G P+E F +++ + + D + M LD ++ P + + L
Sbjct: 381 CFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLL 440
Query: 452 SRCGRKRLALELCSEM 467
R G+ A EL M
Sbjct: 441 GRAGKLNEAHELVENM 456
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 135/315 (42%), Gaps = 22/315 (6%)
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLE 220
L SC++ L S + +L+ +R N + LN +I ++ ++
Sbjct: 66 LVSCSSLLKS------PDYSLSIFRNSEER----NPFVLNALIRGLTENARFESSVRHFI 115
Query: 221 KMKDMGLSPTVVSFNALISGYCNKGL--LGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
M +G+ P ++F ++ G LG AL +L N+ + V +L++ + K
Sbjct: 116 LMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK-NFVDCDSFVRL-SLVDMYAK 173
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
G+L A++VF E + + +N LINGY + + LF M +
Sbjct: 174 TGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSG----S 229
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMT 398
++ LI G G+ +A L + + + N+V +++ LI G + E A Y M
Sbjct: 230 WSTLIKGYVDSGELNRAKQLFELMPEKNVV----SWTTLINGFSQTGDYETAISTYFEML 285
Query: 399 SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKR 458
G PNE T ++S K+ +++ +LD + D I +AL + ++CG
Sbjct: 286 EKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELD 345
Query: 459 LALELCSEMEAKRLL 473
A + S M K +L
Sbjct: 346 CAATVFSNMNHKDIL 360
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 169/387 (43%), Gaps = 18/387 (4%)
Query: 76 HSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKT 135
++ L+ T N++ ++I+R + + ++F +LCS L + +VFK
Sbjct: 76 YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
Y L + RD + + G LE + +++L + L + I +
Sbjct: 136 YGRLGQARDGRQLHGMVIKEG----LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFD 191
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
V N +I + K G + +A ++M VS+N++ISG+ G AL M
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN-VAPNTVTYNTLINGYSQI 314
M V P+ T +L+N C E R E V N N++ LI+ Y +
Sbjct: 248 EMQEKDVKPDGFTMVSLLNA-CAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKC 306
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G E G+ +FE + Q+ +N++ILGL +G ++A +L EL++ L P++ +F
Sbjct: 307 GCIEEGLNVFECAPKKQLS----CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSF 362
Query: 375 SALITGQCVRNNSERAFQIYRSMTS-IGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
++T RA + +R M P+ + ++++V + A ++++M
Sbjct: 363 IGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM- 421
Query: 434 DRSMTPDSGILSALYNGLSRCGRKRLA 460
+ D+ I S+L + + G +A
Sbjct: 422 --PVEEDTVIWSSLLSACRKIGNVEMA 446
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 131/287 (45%), Gaps = 22/287 (7%)
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKM--KDMGLSPTVVSFNALISGYCNKGLLGLALK 252
N + N +I + +S A+ M + P +++ ++ Y G LG A
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY---GRLGQARD 144
Query: 253 MKSLMG---NYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
+ L G + + NT+++ + G L EA+R+F M + + V +N++I
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIM 200
Query: 310 GYSQIGNCETGMRLFEEM-GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV 368
G+++ G + LF+EM RN V ++N++I G ++G+ K A ++ +E+ + ++
Sbjct: 201 GFAKCGLIDQAQNLFDEMPQRNGV-----SWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 369 PNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQV 428
P+ T +L+ SE+ I+ + + N LI ++CK + + V
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 429 LRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPE 475
+ ++ +++ GL+ G + A++L SE+E L P+
Sbjct: 316 FECAPKKQLS----CWNSMILGLANNGFEERAMDLFSELERSGLEPD 358
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 136/343 (39%), Gaps = 22/343 (6%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
++++ + + +DA F M+E P + + L++ L +E + +
Sbjct: 226 WNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIV 285
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
R+ N + +I YCK G + L E LS +N++I G N G
Sbjct: 286 RNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS----CWNSMILGLANNGFEE 341
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN-VAPNTVTYNTL 307
A+ + S + + P+ V+F ++ G++H A F MK + P+ Y +
Sbjct: 342 RAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLM 401
Query: 308 INGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT---KKAANLVKELDK 364
+N G E L + M V+ D + +++L+ K G K+AA +K+LD
Sbjct: 402 VNVLGGAGLLEEAEALIKNM---PVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDP 458
Query: 365 DN-----LVPNASTFSALITGQCVRNNSERAFQIYRSM-TSIGYSPNESTFGMLISVFCK 418
D L+ NA L +R R M +G S E F + + C
Sbjct: 459 DETCGYVLLSNAYASYGLFE----EAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCG 514
Query: 419 NEDFDGA-VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
A + L D+L+ ++ + L++ +R G LA
Sbjct: 515 GTHPKSAEIYSLLDILNWDVSTIKSGFAELFDATTRIGFTYLA 557
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 285 AYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM--GRNQVKPDILTYNAL 342
AY VF+ + N +NT+I G+S+ E + +F +M VKP LTY ++
Sbjct: 77 AYLVFTRIN----HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 343 I-----LGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
LG +DG+ + + L+ D+ + N + +T C+ A++I+ M
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRN-TMLHMYVTCGCLI----EAWRIFLGM 187
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
IG+ + + +I F K D A + +M R+ + ++S G R GR
Sbjct: 188 --IGF--DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMIS----GFVRNGRF 239
Query: 458 RLALELCSEMEAKRLLPEGF 477
+ AL++ EM+ K + P+GF
Sbjct: 240 KDALDMFREMQEKDVKPDGF 259
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 182/434 (41%), Gaps = 67/434 (15%)
Query: 90 KTAHSILRRIINVNVASSSNTLFDALL---CSYRLCDSSPLVFDAVFKT----------- 135
K +H+I VN N L +LL C L + + +VFD +F+
Sbjct: 294 KQSHAIAI----VNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCI--- 192
Y + DA + M+ L L+ L++L+ L +E++ CI
Sbjct: 350 YVQQGLVEDAIYMCQLMR----LEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 193 -SPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
++ + V+ Y K G + A +K+ D + ++ +N L++ Y GL G AL
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDA----KKVFDSTVEKDLILWNTLLAAYAESGLSGEAL 461
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
++ M V PNV+T+N +I + G++ EA +F +M+ + + PN +++ T++NG
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGM 521
Query: 312 SQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKD------GKTKKAANLVKELDKD 365
Q G E + +M + ++P+ + + L C G+T +++ L
Sbjct: 522 VQNGCSEEAILFLRKMQESGLRPNAFSIT-VALSACAHLASLHIGRTIHGY-IIRNLQHS 579
Query: 366 NLVPNASTF----------------------------SALITGQCVRNNSERAFQIYRSM 397
+LV ++ +A+I+ + N + A +YRS+
Sbjct: 580 SLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD-RSMTPDSGILSALYNGLSRCGR 456
+G P+ T ++S D + A+++ D++ RSM P + + L+ G
Sbjct: 640 EGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGE 699
Query: 457 KRLALELCSEMEAK 470
AL L EM K
Sbjct: 700 TEKALRLIEEMPFK 713
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 118/243 (48%), Gaps = 11/243 (4%)
Query: 140 NKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTL 199
++ +A FL+M+ G +P L S ++ ++Q +E A+ F R+M+ + PN +++
Sbjct: 490 GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549
Query: 200 NMVI--CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLM 257
+ + CA+ S + R + ++++ S V +L+ Y G + K + +
Sbjct: 550 TVALSACAHLASLHIGRTIHGY-IIRNLQHSSLVSIETSLVDMYAKCGDIN---KAEKVF 605
Query: 258 GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNC 317
G+ ++ + N +I+ + G L EA ++ ++ + P+ +T +++ + G+
Sbjct: 606 GS-KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDI 664
Query: 318 ETGMRLFEEM-GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSA 376
+ +F ++ + +KP + Y ++ L G+T+KA L++E+ P+A +
Sbjct: 665 NQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP---FKPDARMIQS 721
Query: 377 LIT 379
L+
Sbjct: 722 LVA 724
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 136/322 (42%), Gaps = 16/322 (4%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
YA + L A F +++ + + S A + ++ E AL + EM + I P+
Sbjct: 117 YAKCDALEIAEVLFSKLR----VRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD 172
Query: 196 VYTLNMV--ICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM 253
+ + V C K R + + GL V ++L Y G+L A K+
Sbjct: 173 NFVVPNVCKACGALKWSRFGRGVHGY--VVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 254 KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQ 313
+ + N V +N L+ G+ + GK EA R+FS+M+ V P VT +T ++ +
Sbjct: 231 FDEIPD----RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 314 IGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNAST 373
+G E G + N ++ D + +L+ CK G + A + + + ++V T
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV----T 342
Query: 374 FSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDML 433
++ +I+G + E A + + M + T L+S + E+ +V +
Sbjct: 343 WNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI 402
Query: 434 DRSMTPDSGILSALYNGLSRCG 455
S D + S + + ++CG
Sbjct: 403 RHSFESDIVLASTVMDMYAKCG 424
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 119/249 (47%), Gaps = 10/249 (4%)
Query: 167 FLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMG 226
+S + RA A +R+M R+ I PN TL ++ + G L M G
Sbjct: 283 LISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG 342
Query: 227 LSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
+ V+F + I Y G + +A + +M NV++++++IN F G EA
Sbjct: 343 IEMDAVNFTSFIDMYARCGNIQMARTVFDMMPE----RNVISWSSMINAFGINGLFEEAL 398
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ-VKPDILTYNALILG 345
F +MK NV PN+VT+ +L++ S GN + G + FE M R+ V P+ Y ++
Sbjct: 399 DCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDL 458
Query: 346 LCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
L + G+ +A + + D + P AS + AL++ + + A +I + S+ P
Sbjct: 459 LGRAGEIGEAKSFI---DNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSM--EPE 513
Query: 406 ESTFGMLIS 414
+S+ +L+S
Sbjct: 514 KSSVYVLLS 522
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 39/246 (15%)
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGM 321
V NVV + TLI+GF K + EA+ +F +M ++ PN T ++ S +G+ G
Sbjct: 273 VDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGK 332
Query: 322 RLFEEMGRNQVKPD-------------------------------ILTYNALILGLCKDG 350
+ M RN ++ D +++++++I +G
Sbjct: 333 SVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGING 392
Query: 351 KTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMT-SIGYSPNESTF 409
++A + ++ N+VPN+ TF +L++ N + ++ + SMT G P E +
Sbjct: 393 LFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHY 452
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEA 469
++ + + + A + +M + M G L LS C R ++L E+
Sbjct: 453 ACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL------LSAC-RIHKEVDLAGEIAE 505
Query: 470 KRLLPE 475
K L E
Sbjct: 506 KLLSME 511
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 158/381 (41%), Gaps = 48/381 (12%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDA 131
T T+S++L +A + K S LR + + FD +L ++
Sbjct: 175 TGHTYSLMLKAVA---EVKGCESALRMFRELEREPKRRSCFDVVL------------YNT 219
Query: 132 VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDC 191
+N + + + MK G + T + + +S ++ R+E+AL Y EM +
Sbjct: 220 AISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNK 279
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
IS + +I A K AL+ + M G+ P +V+ N LI+ G +GL
Sbjct: 280 ISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVF 339
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP-NTVTYNTLING 310
K+ S++ + P+ T+N L+ K + + ++F ++ N+ N YNT +
Sbjct: 340 KVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVS 399
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE--LDKD--- 365
++G E ++L EM + + +YN L++ C+ + K A LV E +D
Sbjct: 400 CQKLGYWEKAVKLLYEMEGSGLTVSTSSYN-LVISACEKSRKSKVALLVYEHMAQRDCKP 458
Query: 366 --------------------------NLVPNASTFSALITGQCVRNNSERAFQIYRSMTS 399
+ P+ S ++A I G C+R + A ++Y M
Sbjct: 459 NTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMRE 518
Query: 400 IGYSPNESTFGMLISVFCKNE 420
+G P+ T M++ K++
Sbjct: 519 MGLEPDGKTRAMMLQNLKKHQ 539
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 167/419 (39%), Gaps = 82/419 (19%)
Query: 133 FKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL-------------------- 172
+ + L+K+R A F M+ G P +CN+FLS LL
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKEN 173
Query: 173 --------------QLRRAEVALAFYREM-----RRDCISP--------------NVY-- 197
+++ E AL +RE+ RR C NVY
Sbjct: 174 VTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYET 233
Query: 198 -----------------TLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
T ++++ + + G AL+ ++M + +S + A+IS
Sbjct: 234 ERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISA 293
Query: 241 YCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
+ LALK+ M + PN+V NTLIN K GK+ ++V+S +K P+
Sbjct: 294 CTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPD 353
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEM-GRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
T+N L+ + E ++LF+ + N + YN ++ K G +KA L+
Sbjct: 354 EYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLL 413
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
E++ L + S+++ +I+ S+ A +Y M PN T+ L+
Sbjct: 414 YEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWG 473
Query: 420 EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK--RLALELCSEMEAKRLLPEG 476
+D +L+ + PD + +A +G+ C R+ + A EL +M L P+G
Sbjct: 474 SLWDEVEDILK-----KVEPDVSLYNAAIHGM--CLRREFKFAKELYVKMREMGLEPDG 525
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 6/220 (2%)
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEM-KVANVAPNTVTYNTLINGYSQIGNCETG 320
+ PN N+ ++ + G + +A+ VF M K NV +T Y+ ++ +++ CE+
Sbjct: 138 LQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHT--YSLMLKAVAEVKGCESA 195
Query: 321 MRLFEEMGRNQVKP---DILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSAL 377
+R+F E+ R + D++ YN I + + + + + D + T+S L
Sbjct: 196 LRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLL 255
Query: 378 ITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSM 437
++ SE A +Y M + S E +IS K E +D A+++ + ML + M
Sbjct: 256 VSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGM 315
Query: 438 TPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGF 477
P+ + L N L + G+ L ++ S +++ P+ +
Sbjct: 316 KPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEY 355
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRD---CISPNVYTLNMVICAYCK 208
+K G P + NA L++L + R E L + +R + C++ +Y MV C K
Sbjct: 345 LKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQ--K 402
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG-LALKMKSLMGNYRVSPNVV 267
G +A++ L +M+ GL+ + S+N +IS C K +AL + M PN
Sbjct: 403 LGYWEKAVKLLYEMEGSGLTVSTSSYNLVISA-CEKSRKSKVALLVYEHMAQRDCKPNTF 461
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T+ +L+ C G L + E + V P+ YN I+G + L+ +M
Sbjct: 462 TYLSLVRS-CIWGSLWDEV----EDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKM 516
Query: 328 GRNQVKPDILTYNALILGLCKDGK 351
++PD T ++ L K K
Sbjct: 517 REMGLEPDGKTRAMMLQNLKKHQK 540
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 143/322 (44%), Gaps = 24/322 (7%)
Query: 159 PTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALET 218
P + CN L Q + E ++ Y EM + +SP+ YT V+ A K
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCK 278
K+ G NALI + N G LG+A S + + + V ++++ +G+ K
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIA----SELFDDSAKAHKVAWSSMTSGYAK 190
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILT 338
GK+ EA R+F EM + V +N +I G + ++ LF+ + D++T
Sbjct: 191 RGKIDEAMRLFDEMPY----KDQVAWNVMITGCLKCKEMDSARELFDRF----TEKDVVT 242
Query: 339 YNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE--RAFQIY-- 394
+NA+I G G K+A + KE+ P+ T +L++ V + E + IY
Sbjct: 243 WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYIL 302
Query: 395 --RSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLS 452
S++S Y + LI ++ K D A++V R + DR ++ + L GL+
Sbjct: 303 ETASVSSSIYV-GTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLS----TWNTLIVGLA 357
Query: 453 RCGRKRLALELCSEMEAKRLLP 474
++E+ EM+ ++ P
Sbjct: 358 -LHHAEGSIEMFEEMQRLKVWP 378
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 170/405 (41%), Gaps = 52/405 (12%)
Query: 104 VASSSNTLFDALLCSYRLCDSSPL----VFDAVFKTYANLNKLRDATHTFLRMKEYGFLP 159
+ S+S ++ AL +++L D P + + V + A K + M++ G P
Sbjct: 51 IYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSP 110
Query: 160 TLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETL 219
+ L + +L AF+ ++ R N Y N +I + GDL A E
Sbjct: 111 DRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELF 170
Query: 220 EKMKDMGLSPTVVSFNALISGYCNKGLLGLALKM-------------------------- 253
D V+++++ SGY +G + A+++
Sbjct: 171 ----DDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMD 226
Query: 254 --KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
+ L + +VVT+N +I+G+ G EA +F EM+ A P+ VT +L++
Sbjct: 227 SARELFDRF-TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSAC 285
Query: 312 SQIGNCETGMRL-FEEMGRNQVKPDILT----YNALILGLCKDGKTKKAANLVKELDKDN 366
+ +G+ ETG RL + V I +NALI K G +A + + + +
Sbjct: 286 AVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRD 345
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF-GMLISVFCKNEDFDGA 425
L ST++ LI G + +++E + +++ M + PNE TF G++++ +G
Sbjct: 346 L----STWNTLIVGLAL-HHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR 400
Query: 426 --VQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEME 468
++RDM + + P+ + + L R G+ A M+
Sbjct: 401 KYFSLMRDMYN--IEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK 443
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 47/251 (18%)
Query: 107 SSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNA 166
S+ LFD R + + ++A+ Y N ++A F M++ G P + + +
Sbjct: 227 SARELFD------RFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 167 FLSSLLQLRRAEVA--LAFYREMRRDCISPNVYT----LNMVICAYCKSGDLPRALETLE 220
LS+ L E L Y + +S ++Y N +I Y K G + RA+E
Sbjct: 281 LLSACAVLGDLETGKRLHIYI-LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFR 339
Query: 221 KMKDMGLS------------------------------PTVVSFNALISGYCNKGLLGLA 250
+KD LS P V+F +I + G +
Sbjct: 340 GVKDRDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEG 399
Query: 251 LKMKSLMGN-YRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
K SLM + Y + PN+ + +++ + G+L EA+ MK + PN + + TL+
Sbjct: 400 RKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK---IEPNAIVWRTLLG 456
Query: 310 GYSQIGNCETG 320
GN E G
Sbjct: 457 ACKIYGNVELG 467
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 159/349 (45%), Gaps = 13/349 (3%)
Query: 120 RLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV 179
R C ++ + Y + + ++ + M+ PT + LS+ +++ ++
Sbjct: 195 RRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDL 254
Query: 180 ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALIS 239
+ + P++ N ++ AY G++ A+ MK + V+S+ +++
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK----ARDVISWTSIVK 310
Query: 240 GYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP 299
GY +G L LA ++ V + +++ +I+G+ + G +E+ +F EM+ A + P
Sbjct: 311 GYVERGNLKLA---RTYFDQMPVR-DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIP 366
Query: 300 NTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLV 359
+ T +++ + +G+ E G + + +N++K D++ NALI K G ++KA +
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 360 KELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKN 419
++D+ + T++A++ G + A +++ M + P++ T+ ++S +
Sbjct: 427 HDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHS 482
Query: 420 EDFDGAVQVLRDML-DRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
D A + M D + P + + L R G + A E+ +M
Sbjct: 483 GMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 132/321 (41%), Gaps = 48/321 (14%)
Query: 192 ISPNVYTLNMVICAYCK--SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGL 249
++PN + +C G + A + K+ + P VV +N +I G+ G
Sbjct: 62 VAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPE----PDVVVWNNMIKGWSKVDCDGE 117
Query: 250 ALKMKSLMGNYRVSPNVVTFNTLINGFCKEG-------KLH------------------- 283
+++ M V+P+ TF L+NG ++G KLH
Sbjct: 118 GVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALV 177
Query: 284 EAYRVFSEMKVAN------VAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDIL 337
+ Y + M +A + ++N +I+GY+++ E + L EM RN V P +
Sbjct: 178 KMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSV 237
Query: 338 TYNALILGLCKDGKTKKAANLVKE-LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRS 396
T L+L C K K V E + + P+ +AL+ + A +I+RS
Sbjct: 238 TL-LLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRS 296
Query: 397 MTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
M + + ++ ++ + + G +++ R D+ D + + +G R G
Sbjct: 297 MKA----RDVISWTSIVKGYVER----GNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 348
Query: 457 KRLALELCSEMEAKRLLPEGF 477
+LE+ EM++ ++P+ F
Sbjct: 349 FNESLEIFREMQSAGMIPDEF 369
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 123/284 (43%), Gaps = 17/284 (5%)
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNK--GLLGLALK 252
N Y+ + I CK+ D + L + + G++P L +C++ G + A K
Sbjct: 32 NDYSRFISILGVCKTTDQFKQLHSQSITR--GVAPNPTFQKKLFVFWCSRLGGHVSYAYK 89
Query: 253 MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYS 312
+ + P+VV +N +I G+ K E R++ M V P++ T+ L+NG
Sbjct: 90 LFVKIPE----PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLK 145
Query: 313 QIGNC-ETGMRLFEEMGRNQVKPDILTYNALI--LGLCKDGKTKKAANLVKELDKDNLVP 369
+ G G +L + + + ++ NAL+ LC G A + K+++
Sbjct: 146 RDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLC--GLMDMARGVFDRRCKEDVF- 202
Query: 370 NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
+++ +I+G E + ++ M SP T +++S K +D D +V
Sbjct: 203 ---SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 430 RDMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
+ + P + +AL N + CG +A+ + M+A+ ++
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 194 PNVYTLNMV---ICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
P + TL+ + +C + KS L +A E L G + S++ +IS C G + +
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELL---SSKGYFSELQSYSLMISFLCKAGRVRES 416
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
M ++P+V +N LI CK + A +++ EM V N TYN LI
Sbjct: 417 YTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRK 476
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE-LDKDNLVP 369
S+ G E +RLF++M ++PD Y +LI GLCK+ K + A + ++ +++D+
Sbjct: 477 LSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTV 536
Query: 370 NASTFSALITGQCVRNNSERAFQIYR 395
S + C +S A Q+ R
Sbjct: 537 TRRVLSEFVLNLCSNGHSGEASQLLR 562
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 145/362 (40%), Gaps = 34/362 (9%)
Query: 78 ILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYA 137
++LH+L + A IL + N++ C + + + + +
Sbjct: 228 LILHSLCKCSREMDAFYILEELRNID------------------CKPDFMAYRVIAEAFV 269
Query: 138 NLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRR-------AEVALAFYREMRRD 190
L + + ++ G P AF+ L+ +R AEV ++ M D
Sbjct: 270 VTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDND 329
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
+ + +++ V D A+E L M G P + + + L C
Sbjct: 330 ILDALIGSVSAV--------DPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHL 381
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
+K L+ + + +++ +I+ CK G++ E+Y EMK +AP+ YN LI
Sbjct: 382 IKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEA 441
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
+ +L++EM K ++ TYN LI L ++G+ +++ L ++ + + P+
Sbjct: 442 CCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPD 501
Query: 371 ASTFSALITGQCVRNNSERAFQIYRS-MTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
+ + +LI G C E A +++R M + + C N A Q+L
Sbjct: 502 ETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLL 561
Query: 430 RD 431
R+
Sbjct: 562 RE 563
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/493 (20%), Positives = 188/493 (38%), Gaps = 92/493 (18%)
Query: 31 HPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFK 90
H +S SL + LL N L+L FFNW SH ++ + +L+ +R+F
Sbjct: 43 HSISPSLVARVIDPFLL---NHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFS 99
Query: 91 TAHSILRRIINVNV---ASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANL-----NKL 142
++ +++ + + +S +L D L+ R S+ V + F T + N+L
Sbjct: 100 AMDALFKQVKSNKILLDSSVYRSLIDTLVLG-RKAQSAFWVLEEAFSTGQEIHPDVCNRL 158
Query: 143 RD----------ATHTFLRMKEYGF-LPTL------------ESCNAFLSSLLQLRRAE- 178
A F++M+ G L TL N L + ++++A
Sbjct: 159 LAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANL 218
Query: 179 ------VAL--------------AFY--REMRRDCISPNVYTLNMVICAYCKSGDLPRAL 216
+AL AFY E+R P+ ++ A+ +G+L
Sbjct: 219 NINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQ 278
Query: 217 ETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK----------------MKSLMGN- 259
L+K + +G++P + A I + L A + + +L+G+
Sbjct: 279 VVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSV 338
Query: 260 -------------YRVS----PNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
Y VS P + T + L C+ K + + +
Sbjct: 339 SAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQ 398
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL 362
+Y+ +I+ + G +EM + + PD+ YNALI CK + A L E+
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 363 DKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDF 422
+ N +T++ LI +E + +++ M G P+E+ + LI CK
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Query: 423 DGAVQVLRDMLDR 435
+ A++V R ++R
Sbjct: 519 EAAMEVFRKCMER 531
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 27/331 (8%)
Query: 142 LRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM-RRDCISPNVYTLN 200
+RDA F +M E + S N+ L L++ A + EM +RD IS N
Sbjct: 170 VRDAMKLFEKMSERDTV----SWNSMLGGLVKAGELRDARRLFDEMPQRDLIS-----WN 220
Query: 201 MVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY 260
++ Y + ++ +A E EKM + VS++ ++ GY G + +A M M
Sbjct: 221 TMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMP-- 274
Query: 261 RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETG 320
+ NVVT+ +I G+ ++G L EA R+ +M + + + +++ ++ G G
Sbjct: 275 LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLG 334
Query: 321 MRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITG 380
MR+ + R+ + + NAL+ K G KKA ++ ++ K +LV +++ ++ G
Sbjct: 335 MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV----SWNTMLHG 390
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED---FDGAVQVLRDMLD-RS 436
V + + A +++ M G P++ TF I+V C D + M
Sbjct: 391 LGVHGHGKEAIELFSRMRREGIRPDKVTF---IAVLCSCNHAGLIDEGIDYFYSMEKVYD 447
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEM 467
+ P L + L R GR + A+++ M
Sbjct: 448 LVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 164/357 (45%), Gaps = 36/357 (10%)
Query: 145 ATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVIC 204
A F +++E P + CN+ + + Q + A + EM+R + + +T ++
Sbjct: 70 AVRVFNQVQE----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLK 125
Query: 205 AYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGL--ALKMKSLMGNYRV 262
A LP ++ +GLS + NALI Y G LG+ A+K+ M
Sbjct: 126 ACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER-- 183
Query: 263 SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMR 322
+ V++N+++ G K G+L +A R+F EM ++ +++NT+++GY++
Sbjct: 184 --DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFE 237
Query: 323 LFEEMG-RNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNL-VPNASTFSALITG 380
LFE+M RN V +++ +++G K G + A + DK L N T++ +I G
Sbjct: 238 LFEKMPERNTV-----SWSTMVMGYSKAGDMEMARVM---FDKMPLPAKNVVTWTIIIAG 289
Query: 381 QCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS-MTP 439
+ + A ++ M + G + + +++ C + +L RS +
Sbjct: 290 YAEKGLLKEADRLVDQMVASGLKFDAAAVISILAA-CTESGLLSLGMRIHSILKRSNLGS 348
Query: 440 DSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP----------EGFGQEKIAITS 486
++ +L+AL + ++CG + A ++ +++ K L+ G G+E I + S
Sbjct: 349 NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFS 405
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 119/280 (42%), Gaps = 17/280 (6%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
+ + + YA L++A +M G + + L++ + + + +
Sbjct: 281 VTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSI 340
Query: 187 MRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGL 246
++R + N Y LN ++ Y K G+L +A + + L VS+N ++ G G
Sbjct: 341 LKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDL----VSWNTMLHGLGVHGH 396
Query: 247 LGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM-KVANVAPNTVTYN 305
A+++ S M + P+ VTF ++ G + E F M KV ++ P Y
Sbjct: 397 GKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYG 456
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
L++ ++G + +++ + M ++P+++ + AL LG C + ++ KE+ D
Sbjct: 457 CLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGAL-LGAC---RMHNEVDIAKEV-LD 508
Query: 366 NLVP----NASTFSALITGQCVRNNSERAFQIYRSMTSIG 401
NLV + +S L + E I M S+G
Sbjct: 509 NLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 548
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 175/464 (37%), Gaps = 75/464 (16%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVA---SSSNTLFDALLCSYRLCDSSPLVFDA 131
THSIL+ K A LR ++ + A S L DAL CS R + + D
Sbjct: 253 THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDAL-CSKRKFQEATKLLDE 311
Query: 132 VFKTYANLNKLRDATHTFLR-MKEYGFL----------PTLESC-------NAFLSSLLQ 173
+ K +N R A + ++R + + GFL LE C N+ + LL+
Sbjct: 312 I-KLVGTVNMDR-AYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLK 369
Query: 174 LRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVS 233
+ EM +SPN T+N +C +CK+G + ALE ++G +PT +S
Sbjct: 370 ENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMS 429
Query: 234 FNALISGYCNK-------GLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAY 286
+N LI C +L A+ +G TF+TL N C +GK A
Sbjct: 430 YNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGK-------TFSTLTNALCWKGKPDMAR 482
Query: 287 RVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGL 346
+ ++ P + +I+ +G E + + E ++ V + +LI G
Sbjct: 483 ELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGS 542
Query: 347 CKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAF--------------- 391
+ AA L+ + + P S + +I C + E+ F
Sbjct: 543 ITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHK 602
Query: 392 ---------------------QIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
+Y M G +P ++ +++ + KNE A+
Sbjct: 603 VQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFH 662
Query: 431 DMLDRSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
D+ ++ T + + GL + + A+ EM+ + L P
Sbjct: 663 DLREQGKTKKR-LYQVMIVGLCKANKLDDAMHFLEEMKGEGLQP 705
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 136/325 (41%), Gaps = 4/325 (1%)
Query: 160 TLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETL 219
+L C+A + R ++AL + MR + + + ++++ A +
Sbjct: 181 SLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIF 240
Query: 220 EKMKDMGLSPTVVSFNALISGYCNKGLLGLALK-MKSLMGNYRVSPNVVTFNTLINGFCK 278
+++ G V+ + L+ +C +G L A +++L+ N L++ C
Sbjct: 241 DQISVRGFV-CAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGS-GLGILVDALCS 298
Query: 279 EGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ-VKPDIL 337
+ K EA ++ E+K+ YN I + G +++ + + ++
Sbjct: 299 KRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVF 358
Query: 338 TYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSM 397
YN+++ L K+ +++ E+ + PN T +A + C + A ++YRS
Sbjct: 359 RYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSR 418
Query: 398 TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRK 457
+ IG++P ++ LI C NE + A VL+ +DR S L N L G+
Sbjct: 419 SEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKP 478
Query: 458 RLALELCSEMEAKRLLPEGFGQEKI 482
+A EL + LLP+ KI
Sbjct: 479 DMARELVIAAAERDLLPKRIAGCKI 503
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/486 (20%), Positives = 176/486 (36%), Gaps = 62/486 (12%)
Query: 29 NLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRK 88
+L L LT V +L + D + L+FF+W HT T + L +
Sbjct: 102 HLSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGFHHTRATFHAIFKILRGAKL 161
Query: 89 FKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLV-------------------- 128
L R + S L DAL+ Y + + +
Sbjct: 162 VTLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYH 221
Query: 129 --------------FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
FD +F + + TH+ L +K++ L+ +L +LL
Sbjct: 222 VLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSIL-VKKFCKQGKLDEAEDYLRALLPN 280
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
A C S L +++ A C A + L+++K +G ++
Sbjct: 281 DPA------------GCGS----GLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAY 324
Query: 235 NALISGYCNKGLLG----LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS 290
N I G L K+ L G V +N+++ KE L Y + +
Sbjct: 325 NIWIRALIKAGFLNNPADFLQKISPLEG---CELEVFRYNSMVFQLLKENNLDGVYDILT 381
Query: 291 EMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG 350
EM V V+PN T N + + + G + + L+ P ++YN LI LC +
Sbjct: 382 EMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANE 441
Query: 351 KTKKAANLVK-ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTF 409
++A +++K +D+ + + TFS L C + + A ++ + P
Sbjct: 442 SVEQAYDVLKGAIDRGHFL-GGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAG 500
Query: 410 GMLISVFCKNEDFDGAVQVLRDMLDRSMTPDS-GILSALYNGLSRCGRKRLALELCSEME 468
+IS C + A+ + ++ ++S S + ++L G R +A +L M+
Sbjct: 501 CKIISALCDVGKVEDALMI-NELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQ 559
Query: 469 AKRLLP 474
K P
Sbjct: 560 EKGYTP 565
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 154/392 (39%), Gaps = 31/392 (7%)
Query: 72 TLQTHSILLHTLANNRKFKTAHSILRRIINVN---VASSSNTLFDALLCSYRLCDSSPLV 128
T +++ L+HTL N + A+ +L+ I+ + +TL +AL + + LV
Sbjct: 426 TAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELV 485
Query: 129 FDA--------------VFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQL 174
A + ++ K+ DA + G + + + + + L
Sbjct: 486 IAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITL 545
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCK--SGDLPRALETLEKMKDMGLSPTVV 232
R ++A M+ +P VI C+ SG+ TL K + V
Sbjct: 546 MRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGE-KNFFTTLLKFQLSLWEHKVQ 604
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
++N I G G LA + +M ++P V + ++ + K K+ +A F ++
Sbjct: 605 AYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDL 664
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKT 352
+ + Y +I G + + M EEM ++P I Y I LC + K
Sbjct: 665 REQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKY 723
Query: 353 KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI----GYSPNEST 408
+A LV E K + +A I G + +N+ ++ +Y + T + P +
Sbjct: 724 DEAVGLVNEFRK-----SGRRITAFI-GNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKS 777
Query: 409 FGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
G LI +F D + ++ L +++++ D
Sbjct: 778 LGELIGLFSGRIDMEVELKRLDEVIEKCYPLD 809
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 47/261 (18%)
Query: 152 MKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGD 211
M G PT+ S L S L+ + AL F+ ++R + ++I CK+
Sbjct: 629 MDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQVMIVGLCKANK 687
Query: 212 LPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF-- 269
L A+ LE+MK GL P++ + I CN+ A+ L+ +R S +T
Sbjct: 688 LDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAV---GLVNEFRKSGRRITAFI 744
Query: 270 -NTLINGFCKEGKLHEAYRVFSEMK-VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
N L++ K ++EA+ + M+ + + P + LI +S + E ++ +E+
Sbjct: 745 GNVLLHNAMKSKGVYEAW---TRMRNIEDKIPEMKSLGELIGLFSGRIDMEVELKRLDEV 801
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
D+ TYN L+ + V N +
Sbjct: 802 IEKCYPLDMYTYNMLLRMI------------------------------------VMNQA 825
Query: 388 ERAFQIYRSMTSIGYSPNEST 408
E A+++ + GY PNE T
Sbjct: 826 EDAYEMVERIARRGYVPNERT 846
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 27/251 (10%)
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMR 188
+ ++ YA L +A F M E + +CNA L+ ++ RR A +REM
Sbjct: 80 WTSLLSKYAKTGYLDEARVLFEVMPERNIV----TCNAMLTGYVKCRRMNEAWTLFREMP 135
Query: 189 RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLG 248
+ NV + +++ A C G A+E ++M + VVS+N L++G G +
Sbjct: 136 K-----NVVSWTVMLTALCDDGRSEDAVELFDEMPE----RNVVSWNTLVTGLIRNGDME 186
Query: 249 LALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLI 308
A ++ M S +VV++N +I G+ + + EA +F +M NV VT+ +++
Sbjct: 187 KAKQVFDAM----PSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMV 238
Query: 309 NGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKEL--DKDN 366
GY + G+ RLF EM +I+++ A+I G + ++A L E+ D D
Sbjct: 239 YGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNELYREALMLFLEMKKDVDA 294
Query: 367 LVPNASTFSAL 377
+ PN T +L
Sbjct: 295 VSPNGETLISL 305
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 117/247 (47%), Gaps = 26/247 (10%)
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSP--NVV 267
G L A L+K+ G VV + +L+S Y G L A + + V P N+V
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVL------FEVMPERNIV 109
Query: 268 TFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM 327
T N ++ G+ K +++EA+ +F EM N V++ ++ G E + LF+EM
Sbjct: 110 TCNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEM 164
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
V +++N L+ GL ++G +KA + + ++V +++A+I G +
Sbjct: 165 PERNV----VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVV----SWNAMIKGYIENDGM 216
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
E A ++ M+ N T+ ++ +C+ D A ++ +M +R++ + ++S
Sbjct: 217 EEAKLLFGDMS----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGF 272
Query: 448 -YNGLSR 453
+N L R
Sbjct: 273 AWNELYR 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 139/322 (43%), Gaps = 30/322 (9%)
Query: 161 LESCNAFLSSLLQ---LRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALE 217
L+SCN ++ L+ L RAE + + + + +I Y ++GD+ RA
Sbjct: 368 LQSCNIIINRYLKNGDLERAETLFERVKSLH------DKVSWTSMIDGYLEAGDVSRAFG 421
Query: 218 TLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFC 277
+K+ D V++ +ISG L A + S M + P T++ L++
Sbjct: 422 LFQKLHD----KDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAG 477
Query: 278 KEGKLHEAYRVFSEMK--VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
L + + + A P+ + N+L++ Y++ G E +F +M V+ D
Sbjct: 478 ATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKD 533
Query: 336 ILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYR 395
+++N++I+GL G KA NL KE+ PN+ TF +++ R ++++
Sbjct: 534 TVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFK 593
Query: 396 SMT-SIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRC 454
+M + P + +I + + A + + + TPD + AL L C
Sbjct: 594 AMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL---PFTPDHTVYGAL---LGLC 647
Query: 455 G---RKRLALELCSEMEAKRLL 473
G R + A E +E A RLL
Sbjct: 648 GLNWRDKDA-EGIAERAAMRLL 668
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 171/414 (41%), Gaps = 62/414 (14%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLF----------DALLCSYRLCDS 124
+++I+L N F+ A S R+ A+S NT+ A Y + +
Sbjct: 126 SYNIMLSCYVRNVNFEKAQSFFDRM-PFKDAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 125 SPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFY 184
+ + ++A+ Y L A+H F G + + A ++ ++ ++ E+A A +
Sbjct: 185 NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV----AWTAMITGYMKAKKVELAEAMF 240
Query: 185 REMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPT-------------- 230
++M ++ N+ T N +I Y ++ L+ M + G+ P
Sbjct: 241 KDM---TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL 297
Query: 231 ---------------------VVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF 269
V + +LIS YC G LG A K+ +M +VV +
Sbjct: 298 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK----KDVVAW 353
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
N +I+G+ + G +A +F EM + P+ +T+ ++ + G GM FE M R
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
Query: 330 N-QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSE 388
+ +V+P Y ++ L + GK ++A L++ + P+A+ F L+ V N E
Sbjct: 414 DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP---FRPHAAVFGTLLGACRVHKNVE 470
Query: 389 RAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSG 442
A + + S N + + L +++ ++ +V + M + ++ G
Sbjct: 471 LAEFAAEKLLQLN-SQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPG 523
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 141/295 (47%), Gaps = 16/295 (5%)
Query: 175 RRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSF 234
RR E+ A RE+ + N + N +I Y + GDL +A + G VV++
Sbjct: 167 RRGEMEKA--RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAW 220
Query: 235 NALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKV 294
A+I+GY + LA +++ + V+ N+VT+N +I+G+ + + + ++F M
Sbjct: 221 TAMITGYMKAKKVELA---EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 295 ANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK 354
+ PN+ ++ + G S++ + G ++ + + ++ + D+ +LI CK G+
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 355 AANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLIS 414
A L + + K ++V ++A+I+G N+++A ++R M P+ TF + +
Sbjct: 338 AWKLFEVMKKKDVV----AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF-VAVL 392
Query: 415 VFCKNEDF-DGAVQVLRDML-DRSMTPDSGILSALYNGLSRCGRKRLALELCSEM 467
+ C + + + M+ D + P + + + L R G+ AL+L M
Sbjct: 393 LACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 129/274 (47%), Gaps = 32/274 (11%)
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
++ LN +I +SGD+ AL M+ + +++N+L L+G++
Sbjct: 60 QIFPLNKIIARCVRSGDIDGALRVFHGMR----AKNTITWNSL--------LIGISKDPS 107
Query: 255 SLMGNYRV-----SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
+M +++ P+ ++N +++ + + +A F M + A ++NT+I
Sbjct: 108 RMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAA----SWNTMIT 163
Query: 310 GYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVP 369
GY++ G E LF M ++ + +++NA+I G + G +KA++ K +V
Sbjct: 164 GYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV- 218
Query: 370 NASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVL 429
++A+ITG E A +++ MT + N T+ +IS + +N + +++
Sbjct: 219 ---AWTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 430 RDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
R ML+ + P+S LS+ G S +L ++
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 115/243 (47%), Gaps = 7/243 (2%)
Query: 192 ISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLAL 251
+ ++ + N +I + K+G + +A E ++ D + S+NA+ISGY LAL
Sbjct: 367 VKDHIASRNALIAGFVKNGMVEQAREVFDQTHD----KDIFSWNAMISGYAQSLSPQLAL 422
Query: 252 KM-KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
+ + ++ + +V P+ +T ++ + G L E R + + + PN +I+
Sbjct: 423 HLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDM 482
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
Y++ G+ ET + +F + +N I +NA+I G G K A +L +L + PN
Sbjct: 483 YAKCGSIETALNIFHQT-KNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPN 541
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSI-GYSPNESTFGMLISVFCKNEDFDGAVQVL 429
+ TF +++ C E + SM S G P+ +G ++ + K + A +++
Sbjct: 542 SITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMI 601
Query: 430 RDM 432
+ M
Sbjct: 602 KKM 604
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 160/373 (42%), Gaps = 45/373 (12%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
DS+ + ++V YA L DA F +++ L + S N + ++ RR AL
Sbjct: 73 DSNGYICNSVLNMYAKCRLLADAESVF---RDHAKLDS-ASFNIMVDGYVRSRRLWDALK 128
Query: 183 FYREM-RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
+ M R C+S YT +I Y ++ A+E +M+++G+ V+ +IS
Sbjct: 129 LFDVMPERSCVS---YT--TLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISAC 183
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
+ G + ++SL ++ V L++ +C L +A ++F EM N+
Sbjct: 184 SHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL---- 239
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
VT+N ++NGYS+ G E LF+++ + DI+++ +I G + + +A E
Sbjct: 240 VTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
+ + + P+ L++ S + Q++ ++ G+ + +I + + D
Sbjct: 296 MLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 355
Query: 422 F---------------------------DGAVQVLRDMLDRSMTPDSGILSALYNGLSRC 454
+G V+ R++ D++ D +A+ +G ++
Sbjct: 356 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQS 415
Query: 455 GRKRLALELCSEM 467
+LAL L EM
Sbjct: 416 LSPQLALHLFREM 428
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 182/438 (41%), Gaps = 77/438 (17%)
Query: 79 LLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDS----------SPLV 128
+L+ A R A S+ R ++ AS N + D + S RL D+ S +
Sbjct: 82 VLNMYAKCRLLADAESVFRDHAKLDSASF-NIMVDGYVRSRRLWDALKLFDVMPERSCVS 140
Query: 129 FDAVFKTYANLNKLRDATHTFLRMKEYGF------LPTLESCNAFLSSLLQLRRAE-VAL 181
+ + K YA N+ +A F M+ G L T+ S + L + R + +A+
Sbjct: 141 YTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAI 200
Query: 182 AFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
E R V+ ++ YC L A + ++M + L V++N +++GY
Sbjct: 201 KLKLEGR-------VFVSTNLLHMYCLCLCLKDARKLFDEMPERNL----VTWNVMLNGY 249
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
GL+ A ++ + ++V++ T+I+G ++ +L EA ++EM + P+
Sbjct: 250 SKAGLIEQAEELFDQI----TEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSE 305
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRN------------------------------- 330
V L++ ++ G++L + +
Sbjct: 306 VMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEA 365
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKEL-DKDNLVPNASTFSALITGQCVRNNSER 389
VK I + NALI G K+G ++A + + DKD +++A+I+G + +
Sbjct: 366 SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF-----SWNAMISGYAQSLSPQL 420
Query: 390 AFQIYRSM-TSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR--DMLDRS-MTPDSGILS 445
A ++R M +S P+ T ++SVF + R D L+ S + P+ + +
Sbjct: 421 ALHLFREMISSSQVKPDAIT---MVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTA 477
Query: 446 ALYNGLSRCGRKRLALEL 463
A+ + ++CG AL +
Sbjct: 478 AIIDMYAKCGSIETALNI 495
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 178 EVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
E AL + + + + S + N +IC G AL+ ++ + + P ++F +
Sbjct: 490 ETALNIFHQTK-NISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 238 ISGYCNKGLLGLA-LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
+S C+ GL+ L +S+ ++ + P++ + +++ K G+L EA + +M
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMP--- 605
Query: 297 VAPNTVTYNTLINGYSQIGNCE 318
V + + + L++ GN E
Sbjct: 606 VKADVMIWGMLLSASRTHGNVE 627
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 16/271 (5%)
Query: 194 PNVYT---LNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
P + T L+ +I +Y ++ A++ E+M +G TVVSFNAL++ + L
Sbjct: 97 PKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFE-- 154
Query: 251 LKMKSLMGNY-----RVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYN 305
++ L + ++P+ +++ LI +C GK +A + +M+V V + +
Sbjct: 155 -RVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFT 213
Query: 306 TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKD 365
T++ + G + L+ EM D YN ++ K+ ++ L++E+
Sbjct: 214 TILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKES-PERVKELMEEMSSV 272
Query: 366 NLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGA 425
L P+ +++ L+T CV+ A ++Y + PN +TF LI C N +D
Sbjct: 273 GLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE----QPNAATFRTLIFHLCINGLYDQG 328
Query: 426 VQVLRDMLDRSMTPDSGILSALYNGLSRCGR 456
+ V + PD L GL + R
Sbjct: 329 LTVFKKSAIVHKIPDFKTCKHLTEGLVKNNR 359
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 151/363 (41%), Gaps = 27/363 (7%)
Query: 36 SLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSS-HTLQTHSILLHTLANNRKFKTAHS 94
++T + K L K+++ D +L + V N + S + + + LA +++F +
Sbjct: 30 AITMSKAKSKLRKVQDPDK-ALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEA 88
Query: 95 ILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKE 154
++ N N + T L+ SY +FD K + ++KL
Sbjct: 89 LIESHKN-NPKIKTETFLSTLIRSYGRAS----MFDHAMKMFEEMDKL------------ 131
Query: 155 YGFLPTLESCNAFLSSLLQLRRAEVALAFYRE--MRRDCISPNVYTLNMVICAYCKSGDL 212
G T+ S NA L++ L E + E R + I+P+ + M+I +YC SG
Sbjct: 132 -GTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKP 190
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTL 272
+A+E + M+ G+ T+++F ++ GL+ A + M N + +N
Sbjct: 191 EKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVR 250
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQV 332
+ KE + EM + P+TV+YN L+ Y G +++E G Q
Sbjct: 251 LMNAAKESP-ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYE--GLEQ- 306
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQ 392
P+ T+ LI LC +G + + K+ + +P+ T L G N E A
Sbjct: 307 -PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARG 365
Query: 393 IYR 395
+ R
Sbjct: 366 VAR 368
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 16/274 (5%)
Query: 167 FLSSLLQ-LRRAEV---ALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM 222
FLS+L++ RA + A+ + EM + V + N ++ A S R + ++
Sbjct: 104 FLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEF 163
Query: 223 KDM--GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEG 280
++P +S+ LI YC+ G A+++ M V ++ F T++ K G
Sbjct: 164 PQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNG 223
Query: 281 KLHEAYRVFSEMKVANVAPNTVTYNT-LINGYSQIGNCETGMRLFEEMGRNQVKPDILTY 339
+ EA ++ EM + YN L+N + + E L EEM +KPD ++Y
Sbjct: 224 LVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKE--SPERVKELMEEMSSVGLKPDTVSY 281
Query: 340 NALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTS 399
N L+ C G +A + + L++ PNA+TF LI C+ ++ +++
Sbjct: 282 NYLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCINGLYDQGLTVFKKSAI 337
Query: 400 IGYSPNESTFGMLISVFCKN---EDFDGAVQVLR 430
+ P+ T L KN ED G ++++
Sbjct: 338 VHKIPDFKTCKHLTEGLVKNNRMEDARGVARIVK 371
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 161/416 (38%), Gaps = 56/416 (13%)
Query: 57 LEFFNWVHNCNPSSHTLQ----THSILLHTLANNRKFKTAHS---------ILRRIINVN 103
+ FN++ NPS + Q TH L + + R+F A ILR NV
Sbjct: 65 ISLFNFILE-NPSLFSFQPDLRTHLSLTFRVLSERRFSYAKELLKPVAIDDILRYPFNVI 123
Query: 104 VASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLES 163
V+S + D C ++ F+++ Y++ K + F MK ++
Sbjct: 124 VSS----VIDECGCEKKVVGR---FFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKT 176
Query: 164 CNAFLSSLLQLRRAEVALAFYREMRRDCISP-NVYTLNMVICAYCKSGDLPRALETLEKM 222
C L +L + + E+A F+ M I VY+L +V+ C +G++ RA E +E+M
Sbjct: 177 CTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEM 236
Query: 223 KDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKL 282
L+ G V N+VTF ++I K
Sbjct: 237 -------------GLVKG---------------------VKANIVTFKSMIGCCVKRWDF 262
Query: 283 HEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNAL 342
E V M+ +V + +Y LI+G++ G E RL M +++ + YN +
Sbjct: 263 EELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLI 322
Query: 343 ILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGY 402
+ G + G +K L E+ + PN T+ L+ G C A + +
Sbjct: 323 MNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEF 382
Query: 403 SPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKR 458
+E + L + D +++V+ +M+ P + I L + L RK
Sbjct: 383 EIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNRKE 438
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 6/289 (2%)
Query: 199 LNMVICAYCKSGDLPRALETLEKMK--DMGLSPTVVSFNALISGYCNKGLLGLALKMKSL 256
N +I Y +G +E E MK ++ + + + L C++ + LA SL
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQ--MELARDFFSL 199
Query: 257 MGNYRVSP-NVVTFNTLINGFCKEGKLHEAYRVFSEMK-VANVAPNTVTYNTLINGYSQI 314
M + V + ++ C G++ A + EM V V N VT+ ++I +
Sbjct: 200 MVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKR 259
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
+ E + + M + V D+ +Y LI G GK ++A LV + L + +
Sbjct: 260 WDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLY 319
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLD 434
+ ++ G E+ ++Y M+S G +PN+ T+ +L++ CK A+ L ++
Sbjct: 320 NLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRV 379
Query: 435 RSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFGQEKIA 483
D + S L R G +LE+ +EM +P E++A
Sbjct: 380 NEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLA 428
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 14/339 (4%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSG 210
+MKE P+ S N+ ++ + E A +E++ + + P+ YT N+ + A +
Sbjct: 148 KMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATN 207
Query: 211 DLPRALETLEKM-KDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF 269
D+ +E+M +D ++P +++ + S Y + GL A K + + +
Sbjct: 208 DISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAY 267
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
LI + + GKL E YR++ +++A + V Y +I ++ + LF+E
Sbjct: 268 QFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQA 327
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSER 389
N DI N LI ++G +KA L ++ + NA T+ + + R
Sbjct: 328 NCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMAR 387
Query: 390 AFQIYRSMTSIG------YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
A + SIG + P+ T L+S F + +D +GA +L + + + + I
Sbjct: 388 ALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEI 447
Query: 444 LSALYNGLSRCG------RKRLALELCSEMEA-KRLLPE 475
L + G R+RL +E EA K+LL E
Sbjct: 448 FEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLDE 486
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 263 SPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMR 322
S +T+ +L+N +CKE +A + ++MK N+ P++++YN+L+ Y++ G E
Sbjct: 120 SKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPA 179
Query: 323 LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLV-PNASTFS---ALI 378
+ +E+ V PD TYN + L +++E+++D V P+ +T+S ++
Sbjct: 180 MIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIY 239
Query: 379 TGQCVRNNSERAFQ 392
+ +E+A Q
Sbjct: 240 VDAGLSQKAEKALQ 253
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 182/455 (40%), Gaps = 92/455 (20%)
Query: 73 LQTHSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLF---------DALLCSYRLCD 123
L + ++++ NR A + + +V S + L DA R+ +
Sbjct: 126 LVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 124 SSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
+ + ++A+ Y +K+ +A F + + + S N L ++ ++ A F
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVEARQF 241
Query: 184 YREMR-RDCISPN--------------------------VYTLNMVICAYCKSGDLPRAL 216
+ M RD +S N V+T ++ Y ++ + A
Sbjct: 242 FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 217 ETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF 276
E +KM + VS+NA+++GY + +A ++ +M NV T+NT+I G+
Sbjct: 302 ELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVM----PCRNVSTWNTMITGY 353
Query: 277 CKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVK--- 333
+ GK+ EA +F +M + V++ +I GYSQ G+ +RLF +M R +
Sbjct: 354 AQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 334 ----------PDILTY----------------------NALILGLCKDGKTKKAANLVKE 361
D++ NAL+L CK G ++A +L KE
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
+ ++V +++ +I G E A + + SM G P+++T ++S
Sbjct: 470 MAGKDIV----SWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 422 FDGAVQVLRDML-DRSMTPDSGILSALYNGLSRCG 455
D Q M D + P+S + + + L R G
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 28/260 (10%)
Query: 191 CISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
C ++ N+ I +Y ++G AL ++M + VS+N +ISGY G LA
Sbjct: 59 CGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELA 114
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLING 310
K+ M ++V++N +I G+ + L +A +F M +V ++NT+++G
Sbjct: 115 RKLFDEM----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC----SWNTMLSG 166
Query: 311 YSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
Y+Q G + +F+ M K D+ ++NAL+ ++ K ++A L K + LV
Sbjct: 167 YAQNGCVDDARSVFDRMPE---KNDV-SWNALLSAYVQNSKMEEACMLFKSRENWALV-- 220
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
+++ L+ G + A Q + SM + ++ +I+ + ++ D A R
Sbjct: 221 --SWNCLLGGFVKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEA----R 270
Query: 431 DMLDRSMTPDSGILSALYNG 450
+ D S D +A+ +G
Sbjct: 271 QLFDESPVQDVFTWTAMVSG 290
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 128/308 (41%), Gaps = 6/308 (1%)
Query: 151 RMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCI-SPNVYTLNMVICAYCKS 209
R K G++ T+ LS L+ ++ AL + +R P T ++ KS
Sbjct: 81 RSKANGWVNTVTET---LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKS 137
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNY-RVSPNVVT 268
G RA + ++M + GL PTV + AL++ Y L+ A + M ++ + P+V T
Sbjct: 138 GQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFT 197
Query: 269 FNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM- 327
++TL+ + ++ EM + PNTVT N +++GY ++G + ++ +M
Sbjct: 198 YSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDML 257
Query: 328 GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNS 387
KPD+ T N ++ GK + ++ + P TF+ LI +
Sbjct: 258 VSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMY 317
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
++ + M + + ST+ +I F D M M D+ L
Sbjct: 318 DKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCL 377
Query: 448 YNGLSRCG 455
NG + G
Sbjct: 378 INGYANAG 385
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 143/335 (42%), Gaps = 7/335 (2%)
Query: 108 SNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEY-GFLPTLESCNA 166
+ LFD +L + + ++ A+ Y N + DA +MK + P + + +
Sbjct: 143 AQKLFDEML--EEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYST 200
Query: 167 FLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM-KDM 225
L + + + ++ + Y+EM I+PN T N+V+ Y + G + + L M
Sbjct: 201 LLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVST 260
Query: 226 GLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEA 285
P V + N ++S + N G + + N+ + P TFN LI + K+ +
Sbjct: 261 ACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKM 320
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
V M+ T TYN +I ++ +G+ + F++M +K D T+ LI G
Sbjct: 321 SSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLING 380
Query: 346 LCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPN 405
G K + V+ K + N + ++A+I+ ++ ++Y M +
Sbjct: 381 YANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCD 440
Query: 406 ESTFGMLISVFCK---NEDFDGAVQVLRDMLDRSM 437
TF +++ + K N+ Q + ++DR++
Sbjct: 441 SRTFEIMVEAYEKEGMNDKIYYLEQERQKLMDRTV 475
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 111/306 (36%), Gaps = 21/306 (6%)
Query: 28 ENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNR 87
E L P T + L +D L+ C P T +S LL +
Sbjct: 153 EGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFT---YSTLLKACVDAS 209
Query: 88 KFKTAHSILR----RIINVNVASSSNTL--------FDAL------LCSYRLCDSSPLVF 129
+F S+ + R+I N + + L FD + + C
Sbjct: 210 QFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTM 269
Query: 130 DAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRR 189
+ + + N+ K+ + + + +G P + N + S + R + + MR+
Sbjct: 270 NIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRK 329
Query: 190 DCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGL 249
T N +I A+ GD T ++M+ G+ +F LI+GY N GL
Sbjct: 330 LEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHK 389
Query: 250 ALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLIN 309
+ L + + N +N +I+ K L E RV+ MK ++ T+ ++
Sbjct: 390 VISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVE 449
Query: 310 GYSQIG 315
Y + G
Sbjct: 450 AYEKEG 455
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 326 EMGRNQV--KPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCV 383
+M R Q +P TY L++ L K G+ +A L E+ ++ L P ++AL+
Sbjct: 112 DMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTR 171
Query: 384 RNNSERAFQIYRSMTSIGY-SPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSG 442
N + AF I M S P+ T+ L+ FD + ++M +R +TP++
Sbjct: 172 SNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTV 231
Query: 443 ILSALYNGLSRCGRKRLALELCSEM 467
+ + +G R GR ++ S+M
Sbjct: 232 TQNIVLSGYGRVGRFDQMEKVLSDM 256
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 21/275 (7%)
Query: 128 VFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREM 187
V A+ Y+ LN++ A F E +L S NA +S Q E A++ +REM
Sbjct: 356 VSTALTTVYSKLNEIESARKLFDESPE----KSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 188 RRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLL 247
++ SPN T+ ++ A + G L + ++ ++ ALI Y G +
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 248 GLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTL 307
A ++ LM N VT+NT+I+G+ G+ EA +F EM + + P VT+ +
Sbjct: 472 AEARRLFDLM----TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCV 527
Query: 308 INGYSQIGNCETGMRLFEEM-GRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
+ S G + G +F M R +P + Y ++ L + G ++A ++ + +
Sbjct: 528 LYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM---S 584
Query: 367 LVPNASTFSALITGQC--------VRNNSERAFQI 393
+ P +S + L+ G C R SE+ F++
Sbjct: 585 IEPGSSVWETLL-GACRIHKDTNLARTVSEKLFEL 618
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 8/233 (3%)
Query: 216 LETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLING 275
+E+ K+ D ++ S+NA+ISGY GL A+ + M SPN VT +++
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 276 FCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPD 335
+ G L V ++ + + LI Y++ G+ RLF+ M K +
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM----TKKN 485
Query: 336 ILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYR 395
+T+N +I G G+ ++A N+ E+ + P TF ++ + +I+
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 396 SMTS-IGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSAL 447
SM G+ P+ + ++ + + A+Q + M S+ P S + L
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM---SIEPGSSVWETL 595
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 146/381 (38%), Gaps = 74/381 (19%)
Query: 122 CDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYG----------------FLPTL---- 161
CDS L+ + K Y ++ DA F RM E ++ ++
Sbjct: 150 CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFR 209
Query: 162 ----ESCNAF--------LSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKS 209
ESC L ++ +L+ + + + + + Y L I Y K
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269
Query: 210 GDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTF 269
G + + + P +V++NA+I GY + G L+L SL +S +
Sbjct: 270 GKIKMGSALFREFR----KPDIVAYNAMIHGYTSNGETELSL---SLFKELMLSGARLRS 322
Query: 270 NTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGR 329
+TL++ G L Y + +N + L YS++ E+ +LF+E
Sbjct: 323 STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE--- 379
Query: 330 NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFS----------ALIT 379
+ + ++NA+I G ++G T+ A +L +E+ K PN T + AL
Sbjct: 380 -SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSL 438
Query: 380 GQCVRN---NSERAFQIYRSMTSIGY------------------SPNESTFGMLISVFCK 418
G+ V + +++ IY S IG NE T+ +IS +
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL 498
Query: 419 NEDFDGAVQVLRDMLDRSMTP 439
+ A+ + +ML+ +TP
Sbjct: 499 HGQGQEALNIFYEMLNSGITP 519
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 106/255 (41%), Gaps = 68/255 (26%)
Query: 265 NVVTFNTLINGFCKEGKLHEAYRVFSE------------------------------MKV 294
+ + +NT+I+G+ K E+ +VF + M++
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI 243
Query: 295 ANVAPNTVTYN------TLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK 348
++A T Y+ I+ YS+ G + G LF E KPDI+ YNA+I G
Sbjct: 244 HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR----KPDIVAYNAMIHGYTS 299
Query: 349 DGKTKKAANLVKELDKDNLVPNASTFSAL------------ITGQCVRNNSERAFQIYRS 396
+G+T+ + +L KEL +ST +L I G C+++N + +
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTA 359
Query: 397 MTSI--------------GYSPNES--TFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPD 440
+T++ SP +S ++ +IS + +N + A+ + R+M +P+
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 441 SGILSALYNGLSRCG 455
++ + + ++ G
Sbjct: 420 PVTITCILSACAQLG 434
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 140/322 (43%), Gaps = 17/322 (5%)
Query: 123 DSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALA 182
+S V A+ +A L + DA F M + N+ + Q R++VAL
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW----NSIIGGFAQNSRSDVALE 246
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
++ M+R TL V+ A L ++ + + ++ NAL+ YC
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQA--HVHIVKYDQDLILNNALVDMYC 304
Query: 243 NKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTV 302
G L AL++ + M +V+T++T+I+G + G EA ++F MK + PN +
Sbjct: 305 KCGSLEDALRVFNQMKE----RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYI 360
Query: 303 TYNTLINGYSQIGNCETGMRLFEEMGR-NQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
T ++ S G E G F M + + P Y +I L K GK A L+ E
Sbjct: 361 TIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNE 420
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNES-TFGMLISVFCKNE 420
++ + P+A T+ L+ G C R Y + I P ++ T+ +L +++ ++
Sbjct: 421 MECE---PDAVTWRTLL-GAC-RVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQ 475
Query: 421 DFDGAVQVLRDMLDRSMTPDSG 442
+D ++ M DR + + G
Sbjct: 476 KWDSVEEIRTRMRDRGIKKEPG 497
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 156/392 (39%), Gaps = 62/392 (15%)
Query: 126 PLVF--DAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAF 183
P++F + + Y N L DA F +M + + S +S+ + + + AL
Sbjct: 94 PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKALEL 149
Query: 184 YREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCN 243
M RD + PNVYT + V+ + C R L + GL V +ALI +
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRS-CNGMSDVRMLHC--GIIKEGLESDVFVRSALIDVFAK 206
Query: 244 KGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVT 303
G AL + M V+ + + +N++I GF + + A +F MK A T
Sbjct: 207 LGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 262
Query: 304 Y---------------------------------NTLINGYSQIGNCETGMRLFEEMGRN 330
N L++ Y + G+ E +R+F +M
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 331 QVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
D++T++ +I GL ++G +++A L + + PN T ++ E
Sbjct: 323 ----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 391 FQIYRSMTSI-GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYN 449
+ +RSM + G P +G +I + K D AV++L +M PD+ L
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRTLL- 434
Query: 450 GLSRCGRKRLALELCSEMEAKRLL---PEGFG 478
G R R + +E AK+++ PE G
Sbjct: 435 GACRVQRNMVL----AEYAAKKVIALDPEDAG 462
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 19/270 (7%)
Query: 113 DALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
DAL + +V++++ +A ++ A F RMK GF+ + + L +
Sbjct: 212 DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271
Query: 173 QLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVV 232
L E+ + + + + ++ N ++ YCK G L AL +MK+ V+
Sbjct: 272 GLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKE----RDVI 325
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
+++ +ISG G ALK+ M + PN +T ++ G L + + F M
Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385
Query: 293 -KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGK 351
K+ + P Y +I+ + G + ++L EM + +PD +T+ L LG C+ +
Sbjct: 386 KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRTL-LGACRVQR 441
Query: 352 ----TKKAANLVKELDKDNLVPNASTFSAL 377
+ AA V LD + +A T++ L
Sbjct: 442 NMVLAEYAAKKVIALDPE----DAGTYTLL 467
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 141/331 (42%), Gaps = 73/331 (22%)
Query: 207 CKSGDLPRALETLEKMKDMGLSPTVVSFNALISG-YCNKGLLGLALKMKSLMGNYRVSPN 265
C DLPRA++ ++ ++ GL +++ LI N+ + L + L N P
Sbjct: 37 CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGH-RPM 95
Query: 266 VVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFE 325
+ N LIN + K L++A+++F +M NV +++ T+I+ YS+ + + L
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV----ISWTTMISAYSKCKIHQKALELLV 151
Query: 326 EMGRNQVKPDILTYNALILGLCKDGKTKKA--ANLVKE-LDKDNLVPNA----------- 371
M R+ V+P++ TY++ +L C + ++KE L+ D V +A
Sbjct: 152 LMLRDNVRPNVYTYSS-VLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 372 ----STFSALITGQCVRNN-----------SERAFQIYRSMTSIGYSPNEST-------- 408
S F ++TG + N S+ A ++++ M G+ ++T
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 409 -------FGM------------------LISVFCKNEDFDGAVQVLRDMLDRSMTPDSGI 443
GM L+ ++CK + A++V M +R + S +
Sbjct: 271 TGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 444 LSALYNGLSRCGRKRLALELCSEMEAKRLLP 474
+S GL++ G + AL+L M++ P
Sbjct: 331 IS----GLAQNGYSQEALKLFERMKSSGTKP 357
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 219 LEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGN-YRVSPNVVTFNTLINGFC 277
+M D G+ P V + N L+ GY + AL++ M Y PN T++ LI+G C
Sbjct: 276 FRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLC 335
Query: 278 KEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDIL 337
+G+ A + SEMK PN +YN+L+N ++ G + ++ EM N D +
Sbjct: 336 AQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFI 395
Query: 338 TYNALILGLCKDGKTKKAANLVKELDKDNLVPNAS 372
+Y L+ C+ GK +A L++ L + LV S
Sbjct: 396 SYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDS 430
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 34/263 (12%)
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKM---KDMGLSPTVVSFNALISGYCNKGLLGLAL 251
N+Y N +I + K+G L RA+ M K++ PT+ +++ L K LLG
Sbjct: 208 NLY--NSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILF-----KALLG--- 257
Query: 252 KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGY 311
GN N + + +F +M + + P+ N L+ GY
Sbjct: 258 -----RGN--------------NSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGY 298
Query: 312 SQIGNCETGMRLFEEMGR-NQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPN 370
+ +R+F +M +P+ TY+ LI GLC G+T A L+ E+ VPN
Sbjct: 299 VLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPN 358
Query: 371 ASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLR 430
++++L+ + + A + M G + ++ L+ C+ +D A ++L
Sbjct: 359 GKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL- 417
Query: 431 DMLDRSMTPDSGILSALYNGLSR 453
+ML D L N L +
Sbjct: 418 EMLREKQLVDRDSYDKLVNVLHK 440
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 12/217 (5%)
Query: 269 FNTLINGFCKEGKLHEAYRVFSEM---KVANVAPNTVTYNTLINGYSQIGN--------C 317
+N++I F K GKL A +F M K P TY+ L GN
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 318 ETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDK-DNLVPNASTFSA 376
ET LF +M + ++PD+ N L+ G A + ++ + PN+ T+
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 377 LITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRS 436
LI G C + + A ++ M G+ PN ++ L++ F + + D AV+ L +M++
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 437 MTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLL 473
D L + R G+ A L + K+L+
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV 426
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 130/313 (41%), Gaps = 35/313 (11%)
Query: 28 ENLHPLSTSLTPFRVKHILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNR 87
E + L TP + + L+ D L FNW +H ++ I + L +
Sbjct: 128 ETISKLPPRFTPEELADAI-TLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAK 186
Query: 88 KFKTAHSILRRIINVNVASSSN-------------------TLFDALLCSYRL-CDSSPL 127
++ I+ ++++V + N +F ++ S L C +
Sbjct: 187 MYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIR 246
Query: 128 VFDAVFK--------TYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEV 179
+ +FK +Y N + F +M + G P + + N + +
Sbjct: 247 TYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVND 306
Query: 180 ALAFYREMR--RDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNAL 237
AL + +M DC PN +T + +I C G A E L +MK G P S+N+L
Sbjct: 307 ALRIFHQMSVVYDC-EPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSL 365
Query: 238 ISGYCNKGLLGLALK-MKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVAN 296
++ + G + A+K + ++ N RV + +++ TL++ C++GK EA R+ ++
Sbjct: 366 VNAFALSGEIDDAVKCLWEMIENGRVV-DFISYRTLVDESCRKGKYDEATRLLEMLREKQ 424
Query: 297 VAPNTVTYNTLIN 309
+ + +Y+ L+N
Sbjct: 425 LV-DRDSYDKLVN 436
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 165/385 (42%), Gaps = 54/385 (14%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
LV +A Y++ A F ++E L + N +SS Q + + A++ Y+
Sbjct: 324 LVSNATMTMYSSFEDFGAAHKVFESLEE----KDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 187 MRRDCISPNVYTL--------------------------------NMVICAYCKSGDLPR 214
M + P+ +T N +I AY K+G + +
Sbjct: 380 MHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEK 439
Query: 215 ALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS--LMGNYRVSPNVVTFNTL 272
A E+ L ++S+NA+ISG+ + G L+ S L R+ P+ T +TL
Sbjct: 440 ADLLFER----SLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTL 495
Query: 273 INGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQV 332
++ L + + + T+ N LIN YSQ G + + +F +M
Sbjct: 496 LSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS---- 551
Query: 333 KPDILTYNALILGLCKDGKTKKAANLVKEL-DKDNLVPNASTFSALITGQCVRNNSERAF 391
+ D++++N+LI + G+ + A N K + D+ ++P+A+TFSA+++ E
Sbjct: 552 EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGL 611
Query: 392 QIYRSMTSI-GYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNG 450
+I+ SM G N F L+ + + D A +++ + ++++ + AL++
Sbjct: 612 EIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK-ISEKTIGSRVDVWWALFSA 670
Query: 451 LSRCGRKRLALELCSEMEAKRLLPE 475
+ G +L +M AK L+ +
Sbjct: 671 CAAHGDLKLG-----KMVAKLLMEK 690
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 159/413 (38%), Gaps = 111/413 (26%)
Query: 164 CNAFLS-SLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKM 222
C++ +S +LL L LA ++ + P+VY+ ++ A K GD+ A E +KM
Sbjct: 90 CHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKM 149
Query: 223 KDMGLSPTVVSFNALI-----SGY-----------------------------CNKGLLG 248
+ V +NA+I SGY C+ G L
Sbjct: 150 PE---RDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLD 206
Query: 249 LALKMKSLM--GNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNT 306
++ SL+ + ++ +VV N LI + + +A VF E VA + VT+N
Sbjct: 207 FGKQVHSLVIKAGFFIASSVV--NALITMYFNCQVVVDACLVFEETDVA--VRDQVTFNV 262
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCK---DGKTKKAANLVKELD 363
+I+G + E+ + +F +M ++P LT+ + ++G C G + +
Sbjct: 263 VIDGLAGFKRDES-LLVFRKMLEASLRPTDLTFVS-VMGSCSCAAMGHQVHGLAIKTGYE 320
Query: 364 KDNLVPNAS--------------------------TFSALITGQCVRNNSERAFQIYRSM 397
K LV NA+ T++ +I+ + A +Y+ M
Sbjct: 321 KYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM 380
Query: 398 TSIGYSPNESTFG--------------------------------MLISVFCKNEDFDGA 425
IG P+E TFG LIS + KN + A
Sbjct: 381 HIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA 440
Query: 426 VQVLRDMLDRSMTPDSGILSALY-NGLSRCGRKRLALELCSEMEAKRLLPEGF 477
+ L +++ + I+S Y NG G +R + L SE+ R+LP+ +
Sbjct: 441 DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV---RILPDAY 490
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 126/288 (43%), Gaps = 49/288 (17%)
Query: 183 FYREMRRDCISPNVYTLNMVI--CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISG 240
F+ EMRR + P+ +T V CA K+GDL + GL + + N LI
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 241 YCNKGLLGLALKMKSLMGNYRVSP--NVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
Y L + S + + +P +VVT+N LI+G K ++ A +F M + ++
Sbjct: 162 Y------SLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDL- 214
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKK---- 354
V++N+LI+GY+Q+ +C ++LF+EM +KPD + + + + G +K
Sbjct: 215 ---VSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAI 271
Query: 355 ---------------AANLVKELDKDNLVPNAS------------TFSALITGQCVRNNS 387
A LV K + A T++A+ITG + N
Sbjct: 272 HDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNG 331
Query: 388 ERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
E +R M S G P+ TF + + V C + G V R++ D+
Sbjct: 332 ELTVDYFRKMVSSGIKPDGVTF-ISVLVGCSHS---GLVDEARNLFDQ 375
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 17/281 (6%)
Query: 97 RRIINVNVASSSNTLFDALLCSYRLCDSSPL----VFDAVFKTYANLNKLRDATHTFLRM 152
R ++ NV ++ + L DS PL ++++ YA +N R+A F M
Sbjct: 181 RDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEM 240
Query: 153 KEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDL 212
G P + + LS+ Q + A + +R + + + ++ Y K G +
Sbjct: 241 VALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFI 300
Query: 213 PRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTL 272
A+E E D T+ ++NA+I+G G L + M + + P+ VTF ++
Sbjct: 301 DTAMEIFELCSD----KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISV 356
Query: 273 INGFCKEGKLHEAYRVFSEMK-VANVAPNTVTYNTLINGYSQIGNCETGMRLFEEM---G 328
+ G G + EA +F +M+ + +V Y + + + G E + E+M G
Sbjct: 357 LVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
Query: 329 RNQVKPDILTYNALILGLCKDGK---TKKAANLVKELDKDN 366
N+ K +L ++ L+ G G +KAAN VK L ++
Sbjct: 417 GNREK--LLAWSGLLGGCRIHGNIEIAEKAANRVKALSPED 455
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 145/345 (42%), Gaps = 59/345 (17%)
Query: 183 FYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYC 242
Y ++ ++ I PN+Y +N ++ S DL L+ + M+ + ++ + S+N L+ C
Sbjct: 289 IYEDLLKENIKPNIYVINSLM--NVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCC 346
Query: 243 NKGLLGLALKM----KSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVA 298
G + LA + K + + + + T+ T+I F A +V +MK V
Sbjct: 347 LAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVT 406
Query: 299 PNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDG-------- 350
PNT T+++LI+ + G E LFEEM + +P+ +N ++L C +
Sbjct: 407 PNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFN-ILLHACVEACQYDRAFR 465
Query: 351 --KTKKAANLVKELDKDNLVPNASTFSALI-----TGQCVRNNSE--------------- 388
++ K +++ + L D++V T S I G V NS
Sbjct: 466 LFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPT 525
Query: 389 ----------------RAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDM 432
R ++ M S+G SPN+ T+ LI + + D +GAV++LR M
Sbjct: 526 TATYNILLKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTM 585
Query: 433 LDRSMTPDSGILSALYNGLSRCGRK---RLALELCSEMEAKRLLP 474
PD + A + C +LA L EM ++ P
Sbjct: 586 HSAGTRPD---VVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKP 627
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 140/358 (39%), Gaps = 68/358 (18%)
Query: 75 THSILLHTLANNRKFKTAHSILRRIINVNVASSSNTLFDALLCSYRLCDSSPLVFDAVFK 134
T+ ++ A+ + +K A + + +V V +++T + ++
Sbjct: 376 TYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHT------------------WSSLIS 417
Query: 135 TYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISP 194
AN + A H F M G P + N L + ++ + + A ++ + ++
Sbjct: 418 ACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNE 477
Query: 195 NVYTLNMVICAYCKSGDL-----PRAL-------ETLEKMKDMGLSPTVVSFNALISGYC 242
++Y ++V S ++ P +L ++ K PT ++N L+
Sbjct: 478 SLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACG 537
Query: 243 NKGLLGLAL--KMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
G L +MKSL +SPN +T++TLI+ G + A R+ M A P+
Sbjct: 538 TDYYRGKELMDEMKSL----GLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPD 593
Query: 301 TVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVK 360
V Y T I ++ + LFEEM R Q+KP+ +TYN L+ K G
Sbjct: 594 VVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYG---------- 643
Query: 361 ELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCK 418
S L QC IY+ M + GY PN+ LI +C+
Sbjct: 644 --------------SLLEVRQC--------LAIYQDMRNAGYKPNDHFLKELIEEWCE 679
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 18/311 (5%)
Query: 161 LESCNAFLSSLLQLRRAEVALAFYREMRR----DCISPNVYTLNMVICAYCKSGDLPRAL 216
+ S N L + R ++A Y+E +R + + +T +I + + AL
Sbjct: 335 MTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWAL 394
Query: 217 ETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGF 276
+ + MK +G++P ++++LIS N GL+ A + M PN FN L++
Sbjct: 395 KVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHAC 454
Query: 277 CKEGKLHEAYRVFSEMKVANVAPN-----------TVTYNTLIN-GYSQIGNCETGMRLF 324
+ + A+R+F K ++V + T + N L N G + N +
Sbjct: 455 VEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYI 514
Query: 325 EEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVR 384
+ R KP TYN L+ D + L+ E+ L PN T+S LI
Sbjct: 515 QASKRFCFKPTTATYNILLKACGTD--YYRGKELMDEMKSLGLSPNQITWSTLIDMCGGS 572
Query: 385 NNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGIL 444
+ E A +I R+M S G P+ + I + +N+ A + +M + P+
Sbjct: 573 GDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTY 632
Query: 445 SALYNGLSRCG 455
+ L S+ G
Sbjct: 633 NTLLKARSKYG 643
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 12/224 (5%)
Query: 193 SPNVYTLNMVI--CAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLA 250
+PN+Y +I C C GD ++ E + + P + N+L++ N LG
Sbjct: 264 TPNMYICRTMIDVCGLC--GDYVKSRYIYEDLLKENIKPNIYVINSLMN--VNSHDLGYT 319
Query: 251 LKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAP----NTVTYNT 306
LK+ M V+ ++ ++N L+ C G++ A ++ E K + + TY T
Sbjct: 320 LKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCT 379
Query: 307 LINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDN 366
+I ++ + +++ ++M V P+ T+++LI G ++A +L +E+
Sbjct: 380 IIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASG 439
Query: 367 LVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFG 410
PN+ F+ L+ +RAF++++S G S NES +
Sbjct: 440 CEPNSQCFNILLHACVEACQYDRAFRLFQSWK--GSSVNESLYA 481
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 28/254 (11%)
Query: 246 LLGLALKMKSLMGNYRVSPNVVTFNT--------------------LINGFCKEGKLHEA 285
L GL K+K L+ + V + V + +I+GF K+G +
Sbjct: 192 LAGLGFKIKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFGKKGDMVSV 251
Query: 286 YRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILG 345
+ K PN T+I+ G+ ++E++ + +KP+I N+L+
Sbjct: 252 MTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMNV 311
Query: 346 LCKD-GKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRS---MTSIG 401
D G T K ++ LD + + ++++ L+ C+ + A IY+ M S G
Sbjct: 312 NSHDLGYTLKVYKNMQILD---VTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSG 368
Query: 402 YSPNES-TFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLA 460
++ T+ +I VF + + A++V DM +TP++ S+L + + G A
Sbjct: 369 LLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQA 428
Query: 461 LELCSEMEAKRLLP 474
L EM A P
Sbjct: 429 NHLFEEMLASGCEP 442
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Query: 272 LINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQ 331
+ + K+G+ HEA +FS++K N P+ V + ++ Y+ G + +++F M +
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 332 VKPDILTYNALILGLCKDGKT-KKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERA 390
V P+ TY+ LI GL DGKT K A + E+ + + PNA+T++A+ E A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 391 FQIYRSMTSIGYSPNE 406
++ + M G+ P+E
Sbjct: 323 RELLQEMKGKGFVPDE 338
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 205 AYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSP 264
A K G ALE ++KD P VV+ A++ Y N G LK+ M VSP
Sbjct: 206 ALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSP 265
Query: 265 NVVTFNTLINGFCKEGKLH-EAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRL 323
N T++ LI G +GK H +A + EM ++PN TY + + + G E+ L
Sbjct: 266 NAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESAREL 325
Query: 324 FEEMGRNQVKPD 335
+EM PD
Sbjct: 326 LQEMKGKGFVPD 337
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 345 GLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSP 404
L KDG+T +A L ++ N +P+ +A++ ++ +++ M + G SP
Sbjct: 206 ALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSP 265
Query: 405 NESTFGMLISVFCKN-EDFDGAVQVLRDMLDRSMTPDSGILSALYNGLSRCGRKRLALEL 463
N T+ +LI + + A + L +M+ M+P++ +A++ R G++ A EL
Sbjct: 266 NAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESAREL 325
Query: 464 CSEMEAKRLLPE 475
EM+ K +P+
Sbjct: 326 LQEMKGKGFVPD 337
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 149 FLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCK 208
F +M+ GF T E+ F +L + R AL + +++ P+V ++ AY
Sbjct: 188 FHKMRTEGF--TNEAVKMF-DALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYAN 244
Query: 209 SGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALK--MKSLMGNYRVSPNV 266
+G L+ +M G+SP +++ LI G G K + +MGN +SPN
Sbjct: 245 AGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNG-MSPNA 303
Query: 267 VTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPN 300
T+ + F +EGK A + EMK P+
Sbjct: 304 ATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 110/221 (49%), Gaps = 12/221 (5%)
Query: 195 NVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMK 254
+VY +N +I +Y +G+ A +++ + P VS+N++I GY G + +AL +
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVKAGKMDIALTLF 204
Query: 255 SLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQI 314
M N +++ T+I+G+ + EA ++F EM+ ++V P+ V+ ++ +Q+
Sbjct: 205 RKMAE----KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G E G + + + +++ D + LI K G+ ++A + K + K ++ +
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV----QAW 316
Query: 375 SALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISV 415
+ALI+G + A + M +G PN TF +++
Sbjct: 317 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 142/349 (40%), Gaps = 25/349 (7%)
Query: 66 CNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINV---NVASSSNTLFD--------- 113
C+ + H T LL +N F+ I +I + N + N+L +
Sbjct: 108 CSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFK 167
Query: 114 -ALLCSYRLCDSSPLVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLL 172
A L R+ + + +++V K Y K+ A F +M E + S +S +
Sbjct: 168 LAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI----SWTTMISGYV 223
Query: 173 QLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVV 232
Q + AL + EM+ + P+ +L + A + G L + + + V
Sbjct: 224 QADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV 283
Query: 233 SFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEM 292
LI Y G + AL+ + N + +V + LI+G+ G EA F EM
Sbjct: 284 LGCVLIDMYAKCGEMEEALE---VFKNIK-KKSVQAWTALISGYAYHGHGREAISKFMEM 339
Query: 293 KVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRN-QVKPDILTYNALILGLCKDGK 351
+ + PN +T+ ++ S G E G +F M R+ +KP I Y ++ L + G
Sbjct: 340 QKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGL 399
Query: 352 TKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSI 400
+A ++E+ L PNA + AL+ + N E +I + +I
Sbjct: 400 LDEAKRFIQEMP---LKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 157/358 (43%), Gaps = 22/358 (6%)
Query: 127 LVFDAVFKTYANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYRE 186
++ +++ Y+ + + FL M+E + S N +S+ +Q + L E
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVV----SWNTMISAFVQNGLDDEGLMLVYE 409
Query: 187 MRRDCISPNVYTLNMVICAYC-----KSGDLPRALETLEKMKDMGLSPTVVSFNALISGY 241
M++ + T+ ++ A + G A + ++ G++ + LI Y
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMN------SYLIDMY 463
Query: 242 CNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNT 301
GL+ ++ K+ G+ + T+N++I+G+ + G + + VF +M N+ PN
Sbjct: 464 SKSGLIRISQKL--FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
Query: 302 VTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKE 361
VT +++ SQIG+ + G +L R + ++ +AL+ K G K A ++ +
Sbjct: 522 VTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Query: 362 LDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNED 421
+ N V T++ +I G ERA ++ SM G P+ TF ++S +
Sbjct: 582 TKERNSV----TYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGL 637
Query: 422 FDGAVQVLRDMLD-RSMTPDSGILSALYNGLSRCGRKRLALELCSEMEAKRLLPEGFG 478
D +++ +M + ++ P S + + L R GR A E + + + E +G
Sbjct: 638 IDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWG 695
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 129/339 (38%), Gaps = 53/339 (15%)
Query: 45 ILLKLKNDDVLSLEFFNWVHNCNPSSHTLQTHSILLHTLANNRKFKTAHSILRRIINVNV 104
I L+ ++D L+L+ F W H + + ++ ++ +++ +I
Sbjct: 80 IALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVI-AGA 138
Query: 105 ASSSNTLFDALLCSYRLCDSSPLVFDAVFKTYANLNKLRDA-----THTFLRMKEYGFLP 159
S L++ C R C +F+ F Y + + D+ T+T L
Sbjct: 139 CEMSVPLYN---CIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFN 195
Query: 160 TLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPNVYTLNMVICAYCKSGDLPRALETL 219
L C +L ++ L +
Sbjct: 196 KLNVCYVYLHAVRSLTK------------------------------------------- 212
Query: 220 EKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKSLMGNYRVSPNVVTFNTLINGFCKE 279
+MK G+ P N +I Y + A+++ M Y PN T++ L+ G C++
Sbjct: 213 -QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 280 GKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTY 339
G++ + + EM+V + PN Y LI S + + + +M N + PD+LTY
Sbjct: 272 GRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTY 331
Query: 340 NALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALI 378
N ++ LC+ G+ +A +V+E K + V + L+
Sbjct: 332 NTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%)
Query: 323 LFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQC 382
L ++M N V PD N +I K + +A + KE+ PNA T+S L+ G C
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVC 269
Query: 383 VRNNSERAFQIYRSMTSIGYSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDRSMTPDSG 442
+ + Y+ M G PN S + +LI D AV+V+ DML S++PD
Sbjct: 270 EKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDML 329
Query: 443 ILSALYNGLSRCGRKRLALELCSEMEAK 470
+ + L R GR ALE+ E + +
Sbjct: 330 TYNTVLTELCRGGRGSEALEMVEEWKKR 357
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%)
Query: 282 LHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGMRLFEEMGRNQVKPDILTYNA 341
LH + +MK V P+T N +I Y++ + +R+F+EM +P+ TY+
Sbjct: 204 LHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSY 263
Query: 342 LILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQCVRNNSERAFQIYRSMTSIG 401
L+ G+C+ G+ + KE+ +VPN S + LI + + A ++ M +
Sbjct: 264 LVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANS 323
Query: 402 YSPNESTFGMLISVFCKNEDFDGAVQVLRDMLDR 435
SP+ T+ +++ C+ A++++ + R
Sbjct: 324 LSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%)
Query: 262 VSPNVVTFNTLINGFCKEGKLHEAYRVFSEMKVANVAPNTVTYNTLINGYSQIGNCETGM 321
V P+ N +I + K ++ EA RVF EM + PN TY+ L+ G + G G+
Sbjct: 219 VIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGL 278
Query: 322 RLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTFSALITGQ 381
++EM + P+ Y LI L + + +A +V ++ ++L P+ T++ ++T
Sbjct: 279 GFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTEL 338
Query: 382 CVRNNSERAFQI 393
C A ++
Sbjct: 339 CRGGRGSEALEM 350
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 12/244 (4%)
Query: 136 YANLNKLRDATHTFLRMKEYGFLPTLESCNAFLSSLLQLRRAEVALAFYREMRRDCISPN 195
Y + ++ +A F M E + S A +S Q R ++ L Y +MR+ PN
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVV----SWTAMISGFAQEWRVDICLKLYSKMRKSTSDPN 220
Query: 196 VYTLNMVICAYCKSGDLPRALETLEKMKDMGLSPTVVSFNALISGYCNKGLLGLALKMKS 255
YT ++ A SG L + + MGL + N+LIS YC G L A ++
Sbjct: 221 DYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFD 280
Query: 256 LMGNYRVSPNVVTFNTLINGFCKEGKLHEAYRVFS-EMKVANVAPNTVTYNTLINGYSQI 314
N +VV++N++I G+ + G +A +F M + P+ +TY +++
Sbjct: 281 QFSN----KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHA 336
Query: 315 GNCETGMRLFEEMGRNQVKPDILTYNALILGLCKDGKTKKAANLVKELDKDNLVPNASTF 374
G + G + F M + +KP++ Y+ L+ L + G ++A L++ + + PN+ +
Sbjct: 337 GLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMP---MKPNSVIW 393
Query: 375 SALI 378
+L+
Sbjct: 394 GSLL 397