Miyakogusa Predicted Gene

Lj3g3v2318370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2318370.1 CUFF.43885.1
         (628 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52080.1 | Symbols: AR791 | actin binding protein family | ch...   301   6e-82
AT3G25690.2 | Symbols: CHUP1 | Hydroxyproline-rich glycoprotein ...   218   1e-56
AT3G25690.1 | Symbols: CHUP1 | Hydroxyproline-rich glycoprotein ...   218   1e-56
AT3G25690.3 | Symbols: CHUP1 | Hydroxyproline-rich glycoprotein ...   157   3e-38
AT2G36650.1 | Symbols:  | unknown protein; Has 35333 Blast hits ...    63   5e-10

>AT1G52080.1 | Symbols: AR791 | actin binding protein family |
           chr1:19369788-19371862 FORWARD LENGTH=573
          Length = 573

 Score =  301 bits (772), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 161/326 (49%), Positives = 229/326 (70%), Gaps = 5/326 (1%)

Query: 102 LSPRTK-QSGEEDEFLLPEFNDVMKDAEFGVAGNS---FKKVGPPVAYASLEKDDYEQEI 157
           +SPR +    E+D FLLPEF +  K  +  V  +       +  P+A+ S E+ D+E EI
Sbjct: 82  VSPRRECDLDEKDVFLLPEFEEEAKKLDLLVCDDCETPRSDITAPLAFPSEEEADHENEI 141

Query: 158 WQLRNMIRMLQERERSLEVQLLEYCGLKEQETVVMELQNRLKISNMEAKMFNLKVETLQS 217
            +LRN +R L+ERER LE +LLEY  LKEQ+ + MEL++RLK++ ME K+FN K++ LQ+
Sbjct: 142 NRLRNTVRALRERERCLEDKLLEYYSLKEQQKIAMELRSRLKLNQMETKVFNFKIKKLQA 201

Query: 218 ENWRLAEQVADHAKVLAELDAAKTKVKFLKRKIRHEAEQNKEQIINLKQRVSKLQDLESQ 277
           EN +L  +  +H+KVL ELD AK++V+ LK+K+    +Q+  QI++LKQRV++LQ+ E +
Sbjct: 202 ENEKLKAECFEHSKVLLELDMAKSQVQVLKKKLNINTQQHVAQILSLKQRVARLQEEEIK 261

Query: 278 ATASDQEIETKLRRLKDLEAEAEQLRKTNLRLQMDNSDLARRLDSTQILANAVLEDP-EA 336
           A   D E +  ++RL+DLE+E  +L  TN RLQ +N +L+ +L+S QI+AN+ LE+P E 
Sbjct: 262 AVLPDLEADKMMQRLRDLESEINELTDTNTRLQFENFELSEKLESVQIIANSKLEEPEEI 321

Query: 337 DAXXXXXXXXXXXXXXXTKEVEQLQADRCSDVEELVYLRWINACLRHEMRNYQPPPGKTV 396
           +                 K+VEQLQ DRC+D+E+LVYLRWINACLR+E+R YQPP GKTV
Sbjct: 322 ETLREDCNRLRSENEELKKDVEQLQGDRCTDLEQLVYLRWINACLRYELRTYQPPAGKTV 381

Query: 397 ARDLSKSLSPTSEKKAKQLIVEYANN 422
           ARDLS +LSPTSE+KAKQLI+EYA++
Sbjct: 382 ARDLSTTLSPTSEEKAKQLILEYAHS 407


>AT3G25690.2 | Symbols: CHUP1 | Hydroxyproline-rich glycoprotein
           family protein | chr3:9354061-9357757 FORWARD
           LENGTH=1004
          Length = 1004

 Score =  218 bits (554), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 202/321 (62%), Gaps = 9/321 (2%)

Query: 113 DEFLLPEFNDVMK-DAEFGVAG--NSFKKVGPPVAYASLEKDDYEQEIWQLRNMIRMLQE 169
           D+ +LPEF D++  + E+ +    N+ +K      Y  +E    + E+ +L+ +++ L+E
Sbjct: 85  DDDILPEFEDLLSGEIEYPLPDDDNNLEKAEKERKY-EVEMAYNDGELERLKQLVKELEE 143

Query: 170 RERSLEVQLLEYCGLKEQETVVMELQNRLKISNMEAKMFNLKVETLQSENWRLAEQVADH 229
           RE  LE +LLEY GLKEQE+ ++ELQ +LKI  +E  M N+ + +LQ+E  +L E+++ +
Sbjct: 144 REVKLEGELLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELSQN 203

Query: 230 AKVLAELDAAKTKVKFLKRKIRHEAEQNKEQIINLKQRVSKLQDLESQATASDQEIETKL 289
             V  EL+ A+ K+K L+R+I+ +A Q K Q++ LKQ VS LQ  E +A   D E+E KL
Sbjct: 204 GIVRKELEVARNKIKELQRQIQLDANQTKGQLLLLKQHVSSLQMKEEEAMNKDTEVERKL 263

Query: 290 RRLKDLEAEAEQLRKTNLRLQMDNSDLARRLDSTQ----ILANAVLEDPEADAXXXXXXX 345
           + ++DLE +  +L++ N  LQ +  +L+ +LDS +     L+N    D  A         
Sbjct: 264 KAVQDLEVQVMELKRKNRELQHEKRELSIKLDSAEARIATLSNMTESDKVAKV-REEVNN 322

Query: 346 XXXXXXXXTKEVEQLQADRCSDVEELVYLRWINACLRHEMRNYQPPPGKTVARDLSKSLS 405
                    K+VE LQ +R S+VEELVYLRW+NACLR+E+RNYQ P GK  ARDLSK+LS
Sbjct: 323 LKHNNEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQTPAGKISARDLSKNLS 382

Query: 406 PTSEKKAKQLIVEYANNTEGR 426
           P S+ KAK+L++EYA +  G+
Sbjct: 383 PKSQAKAKRLMLEYAGSERGQ 403


>AT3G25690.1 | Symbols: CHUP1 | Hydroxyproline-rich glycoprotein
           family protein | chr3:9354061-9357757 FORWARD
           LENGTH=1004
          Length = 1004

 Score =  218 bits (554), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 202/321 (62%), Gaps = 9/321 (2%)

Query: 113 DEFLLPEFNDVMK-DAEFGVAG--NSFKKVGPPVAYASLEKDDYEQEIWQLRNMIRMLQE 169
           D+ +LPEF D++  + E+ +    N+ +K      Y  +E    + E+ +L+ +++ L+E
Sbjct: 85  DDDILPEFEDLLSGEIEYPLPDDDNNLEKAEKERKY-EVEMAYNDGELERLKQLVKELEE 143

Query: 170 RERSLEVQLLEYCGLKEQETVVMELQNRLKISNMEAKMFNLKVETLQSENWRLAEQVADH 229
           RE  LE +LLEY GLKEQE+ ++ELQ +LKI  +E  M N+ + +LQ+E  +L E+++ +
Sbjct: 144 REVKLEGELLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELSQN 203

Query: 230 AKVLAELDAAKTKVKFLKRKIRHEAEQNKEQIINLKQRVSKLQDLESQATASDQEIETKL 289
             V  EL+ A+ K+K L+R+I+ +A Q K Q++ LKQ VS LQ  E +A   D E+E KL
Sbjct: 204 GIVRKELEVARNKIKELQRQIQLDANQTKGQLLLLKQHVSSLQMKEEEAMNKDTEVERKL 263

Query: 290 RRLKDLEAEAEQLRKTNLRLQMDNSDLARRLDSTQ----ILANAVLEDPEADAXXXXXXX 345
           + ++DLE +  +L++ N  LQ +  +L+ +LDS +     L+N    D  A         
Sbjct: 264 KAVQDLEVQVMELKRKNRELQHEKRELSIKLDSAEARIATLSNMTESDKVAKV-REEVNN 322

Query: 346 XXXXXXXXTKEVEQLQADRCSDVEELVYLRWINACLRHEMRNYQPPPGKTVARDLSKSLS 405
                    K+VE LQ +R S+VEELVYLRW+NACLR+E+RNYQ P GK  ARDLSK+LS
Sbjct: 323 LKHNNEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQTPAGKISARDLSKNLS 382

Query: 406 PTSEKKAKQLIVEYANNTEGR 426
           P S+ KAK+L++EYA +  G+
Sbjct: 383 PKSQAKAKRLMLEYAGSERGQ 403


>AT3G25690.3 | Symbols: CHUP1 | Hydroxyproline-rich glycoprotein
           family protein | chr3:9354061-9357757 FORWARD LENGTH=863
          Length = 863

 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 132/209 (63%), Gaps = 5/209 (2%)

Query: 222 LAEQVADHAKVLAELDAAKTKVKFLKRKIRHEAEQNKEQIINLKQRVSKLQDLESQATAS 281
           L E+++ +  V  EL+ A+ K+K L+R+I+ +A Q K Q++ LKQ VS LQ  E +A   
Sbjct: 55  LQEELSQNGIVRKELEVARNKIKELQRQIQLDANQTKGQLLLLKQHVSSLQMKEEEAMNK 114

Query: 282 DQEIETKLRRLKDLEAEAEQLRKTNLRLQMDNSDLARRLDSTQ----ILANAVLEDPEAD 337
           D E+E KL+ ++DLE +  +L++ N  LQ +  +L+ +LDS +     L+N    D  A 
Sbjct: 115 DTEVERKLKAVQDLEVQVMELKRKNRELQHEKRELSIKLDSAEARIATLSNMTESDKVAK 174

Query: 338 AXXXXXXXXXXXXXXXTKEVEQLQADRCSDVEELVYLRWINACLRHEMRNYQPPPGKTVA 397
                            K+VE LQ +R S+VEELVYLRW+NACLR+E+RNYQ P GK  A
Sbjct: 175 VREEVNNLKHNNEDL-LKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQTPAGKISA 233

Query: 398 RDLSKSLSPTSEKKAKQLIVEYANNTEGR 426
           RDLSK+LSP S+ KAK+L++EYA +  G+
Sbjct: 234 RDLSKNLSPKSQAKAKRLMLEYAGSERGQ 262


>AT2G36650.1 | Symbols:  | unknown protein; Has 35333 Blast hits to
           34131 proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr2:15359994-15361194 FORWARD LENGTH=373
          Length = 373

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 115/235 (48%), Gaps = 21/235 (8%)

Query: 155 QEIWQLRNMIRMLQERERSLEVQLLEYCGLKEQETVVMELQNRLKISNMEAKMFNLKVET 214
           QEI  L++    LQ +E  +E+    +C LK+QE +++E ++ L +   +   F  +V  
Sbjct: 76  QEILSLKSRFEELQRKEYEMELHFERFCNLKDQEVMLIEHKSILSLEKAQLDFFRKEVLA 135

Query: 215 LQSENWRLAEQVADHAKVLAELDAAKTKVKFLKRKIRHEAEQNKEQIINLKQRVSKLQDL 274
           ++ E+ R    V  + K++ E+   +++   L+ K +    ++K Q+  +     K+  +
Sbjct: 136 MEEEHKRGQALVIVYLKLVGEIQELRSENGLLEGKAKKLRRKSK-QLYRVVNESRKIIGV 194

Query: 275 ESQATASDQEIETKLRRLKDLEAEAEQLRKTNLRLQMDNSDL-ARRLDSTQILANAVLED 333
           E +      E+ETK   +K+LE + + +      LQ +  +L  +  +ST  + +  +ED
Sbjct: 195 EKEFLKCVDELETKNNIVKELEGKVKDMEAYVDVLQEEKEELFMKSSNSTSEMVS--VED 252

Query: 334 PEADAXXXXXXXXXXXXXXXTKEVEQLQADRCSDVEELVYLRWINACLRHE-MRN 387
                                +E E+L+ D  + V+E++ LRW NACLRHE MRN
Sbjct: 253 ----------------YRRIVEEYEELKKDYANGVKEVINLRWSNACLRHEVMRN 291