Miyakogusa Predicted Gene

Lj3g3v2317950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2317950.1 tr|B9IGR3|B9IGR3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_577157 PE=4
SV=1,22.66,0.000000000000004,Clavaminate synthase-like,NULL;
coiled-coil,NULL; DIOX_N,Non-haem dioxygenase N-terminal domain; no
,CUFF.43838.1
         (368 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79760.1 | Symbols: DTA4 | downstream target of AGL15-4 | chr...   135   4e-32
AT2G38500.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-depend...    72   6e-13

>AT1G79760.1 | Symbols: DTA4 | downstream target of AGL15-4 |
           chr1:30012054-30013042 FORWARD LENGTH=299
          Length = 299

 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 149/330 (45%), Gaps = 75/330 (22%)

Query: 7   DFRAPPPSPVASGRRSSFT-NEDILTEFLETSPRVPDLVLPDNIFPKQRHLESPPVVDFV 65
           DFRAPPPSPVAS RR+SFT NED+L+EFL+   RVP+LVLPD +FPK   L +PP  D  
Sbjct: 7   DFRAPPPSPVASSRRASFTANEDVLSEFLDKCGRVPNLVLPDKVFPKHTFLLNPPTFD-- 64

Query: 66  SLCFHHDDALRDVVSRSMATIGCFQIINHGIPPQLITSVAQSAAGIFCVPLGNRAAVTRS 125
              FH  D+L                          +++  + A I C  L N       
Sbjct: 65  ---FHRLDSL--------------------------SALLDAIATIGCFQLVNHGV---- 91

Query: 126 PEKPWGXXXXXXXXXXXXXXXXXXXXVWCEDHEFKLKMEGILPRGYQNFSEKMESLKTRV 185
           PE                        +  +DH             Y +  E M   +   
Sbjct: 92  PEAMVKAAMDKTIFHDETEEFVFNKDINADDHT----------ACYSDLRELMGEAERIG 141

Query: 186 ETVAEKILAVMLKNVARKFEGDVNVVRCGHEVGSVCCISKHCRDDRSGRWGSSLKYDVIR 245
           + V EK+ A                 R   E   VC + +H   + S       K + IR
Sbjct: 142 KAVREKLGAGG---------------RSQKEGVGVCYVKRHNIKNES-------KEEAIR 179

Query: 246 MLIRGADYYHSLCVHVCDGCSEFHVYSKKSWLSFYPEQGALIITGGDQTQILSGGYYKHV 305
           ML+RG D  HSLC++ C   +EFHVYSK+ W+SF P   A+I+T GDQ      G +K V
Sbjct: 180 MLLRGYDERHSLCLNFCH--AEFHVYSKRGWVSFSPRPDAVIVTIGDQGW---SGRFKGV 234

Query: 306 IGRP-IFQCEKEDN-ISMTFLYSPPNSENN 333
           +GRP +++ +   N IS++FLY+   + +N
Sbjct: 235 VGRPLLYKSDLHHNLISISFLYTSTTTLHN 264


>AT2G38500.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-dependent
           oxygenase superfamily protein | chr2:16117610-16119041
           REVERSE LENGTH=356
          Length = 356

 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 44/303 (14%)

Query: 19  GRRSSFTNEDILTEFLETSPRVPDLVLPDNIFPKQ----RHLESPPVVDFVSLCFHHDDA 74
            R S     +ILTE +E S +VP+L LP++    +    RHL  P  +DF  L    + +
Sbjct: 28  ARGSRCAASEILTEIIERSIQVPELTLPESHSGGESCGSRHL-IPAEIDFRLLASRREGS 86

Query: 75  LRDVVSRSMATIGCFQIINHGIPPQLITSVAQSAAGIFCVPLG-----NRAAVTRSPEKP 129
           + D + RS    G F++  HGI  + + S+ + +  +F V  G     +R+ V    E  
Sbjct: 87  V-DRLVRSAREFGAFRVSYHGISGEELRSLVRESGRVFGVLEGRDTGFHRSVVGNRDEIV 145

Query: 130 WGXXXXXXXXXXXXXXXXXXXXVWCEDHEFKLKMEGILPRGYQNFSEKMESLKTRVETVA 189
           W                      W E  E+    E I P  Y+ FS++ME++  ++E +A
Sbjct: 146 W-------------------VRSWKERMEWA--REYIGPERYRCFSQEMENVADKLEDIA 184

Query: 190 EKILAVMLKNVARKFEGDVNVVRCGHEVGSVCCISKHCRDDRSGRWGSSLKYDVIRMLIR 249
            K+  +M++N  R    D  + R      SV  + ++  ++ + +     K     ML  
Sbjct: 185 RKLGQIMVENSRRP--NDKKIQRGE----SVLSVYRYNHENVTEQSPPLPKERTEEML-- 236

Query: 250 GADYYHSLCVHVCDGCSEFHVYSKKSWLSFYPEQGALIITGGDQTQILSGGYYKHVIGRP 309
               +++L +H+     EF V S K  LSF+ +   +++T G Q +  S G +K   G  
Sbjct: 237 ----HYTLSLHLPAKNCEFRVNSGKGPLSFHADPDTILVTFGRQLEEWSLGEFKCRQGEI 292

Query: 310 IFQ 312
           I+ 
Sbjct: 293 IYH 295