Miyakogusa Predicted Gene

Lj3g3v2317870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2317870.1 Non Chatacterized Hit- tr|I1JMG9|I1JMG9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,79.73,0,seg,NULL; TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE,NULL;
3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/,CUFF.43836.1
         (299 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17660.1 | Symbols:  | tRNA (guanine-N-7) methyltransferase |...   333   7e-92
AT5G24840.1 | Symbols:  | tRNA (guanine-N-7) methyltransferase |...    65   6e-11

>AT5G17660.1 | Symbols:  | tRNA (guanine-N-7) methyltransferase |
           chr5:5818778-5820811 REVERSE LENGTH=312
          Length = 312

 Score =  333 bits (855), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 162/244 (66%), Positives = 196/244 (80%), Gaps = 10/244 (4%)

Query: 58  LHSTQLVAAEYADLNLSYDL--DLGHVRIRQHVNPLSSSFSVPAQVPDWNQVFADPSLPL 115
           L S +LV  EYA+LNL++ +  ++GHVRIRQHVNPLSSSFS PA VP W++V+ DPSLPL
Sbjct: 68  LRSNELVELEYAELNLNHKISEEVGHVRIRQHVNPLSSSFSKPAPVPVWDEVYKDPSLPL 127

Query: 116 MVDIGCGSGRFLMWLAKRTPKERNYLGLEIRQRLVKRAEIWVKDLALDNIHFLFANATIS 175
           MVDIG GSGRFL+W A +  + RNYLGLEIRQ+LVKRA  WV +L L N+HF+FANA +S
Sbjct: 128 MVDIGSGSGRFLLWQANKNVESRNYLGLEIRQKLVKRANFWVNELGLSNVHFIFANAMVS 187

Query: 176 FKQLVESYPGPLLLVSILCPDPHFKKKHHKRRVLQKSLVGSIVDNLMPGGQVFVQSDVLE 235
           F+ L+ SYPGPL +VSILCPDPHFKK+H KRRV+QK LV SI+ NL PGG++FVQSDVL+
Sbjct: 188 FEHLISSYPGPLEIVSILCPDPHFKKRHQKRRVVQKPLVNSILQNLKPGGKIFVQSDVLD 247

Query: 236 VALDMRNQFD-EVDALKHIDDSNPAMLCDSE-GWLLSNPMEIRTEREIHAEFEGAKIYRR 293
           VA DMR+Q D E + L+H+D        D+E GWL  NPM IRTEREIHAEFEGA+IYRR
Sbjct: 248 VAQDMRDQLDEESNVLQHMD------TVDTEDGWLTENPMGIRTEREIHAEFEGARIYRR 301

Query: 294 LYQR 297
           LYQ+
Sbjct: 302 LYQK 305


>AT5G24840.1 | Symbols:  | tRNA (guanine-N-7) methyltransferase |
           chr5:8533897-8534652 REVERSE LENGTH=251
          Length = 251

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 108/244 (44%), Gaps = 49/244 (20%)

Query: 83  RIRQHVNPLSSS-FSVP---AQVPDWNQVF-----ADPSLPLMV---DIGCGSGRFLMWL 130
           R R H NPLS S F +P   A V D++  F     AD      V   DIGCG G  L+ L
Sbjct: 23  RARAHSNPLSDSHFPIPISPAHV-DYSLHFPKFVEADNKFIKKVEFADIGCGFGGLLISL 81

Query: 131 AKRTPKERNYLGLEIRQRLVKRAEIWVKD--LAL---------DNIHFLFANATISFKQL 179
           A   P +   +G+E+R ++ +    +VK+  LAL         +NI  +  N+       
Sbjct: 82  ATLFP-DTLMIGMELRDKVTE----YVKERILALRRTSSEGQYENISVVRTNSMKYIPNY 136

Query: 180 VESYPGPLLLVSILCPDPHFKKKHHKRRVLQKSLVGSIVDNLMPGGQVFVQSDVLEVA-- 237
            E   G L  +  L PDPHFK+K+H+RRV+   L+      L  GG ++  +DV E+   
Sbjct: 137 FEK--GQLSKMFFLFPDPHFKEKNHRRRVISTHLLDEYAYVLRAGGIIYTITDVEELGEW 194

Query: 238 ----LDMRNQFDEVDALKHIDDSNPAMLCDSEGWLLSNPMEIRTEREIHAEFEGAKIYRR 293
               L+    F+ +   + + D    +LC +            TE        G + +R 
Sbjct: 195 MKSCLEKHPMFESLTQEELVSDPVVELLCSA------------TEEGQKVARNGGQTFRA 242

Query: 294 LYQR 297
           +++R
Sbjct: 243 VFRR 246