Miyakogusa Predicted Gene

Lj3g3v2315250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2315250.1 Non Chatacterized Hit- tr|D7KIP1|D7KIP1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,71.79,0.00000003, ,CUFF.43781.1
         (334 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52155.1 | Symbols:  | unknown protein; Has 37 Blast hits to ...   511   e-145

>AT1G52155.1 | Symbols:  | unknown protein; Has 37 Blast hits to 37
           proteins in 13 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
           Eukaryotes - 2 (source: NCBI BLink). |
           chr1:19417666-19419591 FORWARD LENGTH=319
          Length = 319

 Score =  511 bits (1316), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 242/312 (77%), Positives = 271/312 (86%)

Query: 6   DGVDESYRALPSLYLTFLSIWFLSACSWTAYTYKTRHFQWNNLQWALTVVPLIKALQLML 65
           +GVD+SYR LP LYLTFL+IW  SACSWT  T+K RHFQ N+LQW L  VPLIKALQL L
Sbjct: 8   NGVDDSYRHLPILYLTFLTIWSFSACSWTVNTFKNRHFQTNSLQWTLASVPLIKALQLTL 67

Query: 66  SFLFWYSCFNYQTCSLWMSFGVYVTGVLFQTAAFVSFLLISHGYCIMCERLSLSERRSTA 125
           SFLFW+SCF++  CSLWMSFGVYVTGVLFQTA+FVSFLLISHGYCI CERLSL+ERR+TA
Sbjct: 68  SFLFWHSCFHHHICSLWMSFGVYVTGVLFQTASFVSFLLISHGYCITCERLSLTERRTTA 127

Query: 126 ALACVFYLTLVGYKASVPYFTVLLLLNYVISFYIIFHHISQNLLVLREQLSIIVNDDVQA 185
           +L CVFYLTLVGY+ASVPYF VLL+LNY+ISFY+IFHHISQNL VLREQLS I +++VQA
Sbjct: 128 SLGCVFYLTLVGYRASVPYFAVLLILNYMISFYVIFHHISQNLAVLREQLSFIEDENVQA 187

Query: 186 MHDAVYKKYIMFKKFQGAMQMVAMAETMIYMNMDDSSQNYWLRLLIREWVQFCIFGYIGW 245
           MHDAVY KYIMFKKFQGAMQ+VAMAET+IYMNMD+SSQNYWLRLLIREW QFCIF YIGW
Sbjct: 188 MHDAVYAKYIMFKKFQGAMQIVAMAETVIYMNMDNSSQNYWLRLLIREWAQFCIFLYIGW 247

Query: 246 IFRSQDLAPHFSVMPTTKCKGETLVPPIYSLEMDASTFKEFSSHEWHIGVPTCTFHDESS 305
            FRSQD+AP FSVMPT K K  T++PPIYS+EMDA +FKEF S EW+IGVP    + E  
Sbjct: 248 TFRSQDMAPRFSVMPTLKPKENTIIPPIYSMEMDAKSFKEFRSQEWNIGVPMPYSNYEKQ 307

Query: 306 KKDVLVIIQHPR 317
           K  VLVIIQHPR
Sbjct: 308 KDSVLVIIQHPR 319