Miyakogusa Predicted Gene

Lj3g3v2315230.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2315230.3 Non Chatacterized Hit- tr|F6I3C8|F6I3C8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,65,0.000000002,seg,NULL,CUFF.43779.3
         (495 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G11560.1 | Symbols:  | LETM1-like protein | chr3:3639553-3643...   128   7e-30
AT5G06220.2 | Symbols:  | LETM1-like protein | chr5:1880049-1885...   127   1e-29
AT3G11560.4 | Symbols:  | LETM1-like protein | chr3:3639553-3645...   127   2e-29
AT3G11560.3 | Symbols:  | LETM1-like protein | chr3:3639553-3645...   127   2e-29
AT3G11560.2 | Symbols:  | LETM1-like protein | chr3:3639553-3645...   127   2e-29
AT5G06220.1 | Symbols:  | LETM1-like protein | chr5:1880049-1885...   114   2e-25

>AT3G11560.1 | Symbols:  | LETM1-like protein | chr3:3639553-3643450
           FORWARD LENGTH=619
          Length = 619

 Score =  128 bits (322), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 191/447 (42%), Gaps = 45/447 (10%)

Query: 80  TDQNEEEEITNVTSSSQGMEFNRVDCVVWVLHESARSFSQAAESIGLARSGRGLAMAWIG 139
           +  N E+  T+ T S Q  + N  + +   LH++ARS   A +              W+G
Sbjct: 89  SSSNLEDMRTSFTGSLQ--DENNSNGLNQSLHDAARSIELAVKEKITPSRFSWFPSTWLG 146

Query: 140 KDVRVWHRRIAYQVAVYALLKTAIELEILLSQERQNESSPVRNILT----PLINQMGERI 195
            D   W + ++YQ ++Y+LL+   E+    +   ++ +  V+  L+    PL N M E +
Sbjct: 147 ADKYAWVKTLSYQASLYSLLQAVNEISSRGNYRDEDINVFVQRSLSRQAAPLENMMRENL 206

Query: 196 ESQLKMKHPYLVQWFRDTKMPRMTGYFIPLLK---------------QWSMEYXXXXXXX 240
            S    KHP   +WF   ++P +   F+  L+               + +          
Sbjct: 207 SS----KHPKAYEWFWSEQVPSVVTSFVNYLEGDQRFVAATSVYAKGKSAAASNEIEVSL 262

Query: 241 XXXXXTCCSAVVKLGSSRICCSKLVSSLEDVLVKLMDFSLNLATLDKLHQLATGAGFELN 300
                 C +A+ K+G ++  C    S + D   +LM+  ++   L + +      G +  
Sbjct: 263 LMLVLNCIAAITKVGPAKFSCPPFFSMIPDTTGRLMEKLVDFVPLPQAYHSIKSIGLQRE 322

Query: 301 FLSHFGGK-----VLPSEKTEDLEFWIGLAHMKLFKAFSKKSITLSKQNFLHKIH--SES 353
           FL+HFG +     V     T+++ FW+ L   +L +A  ++ I  SK      I      
Sbjct: 323 FLTHFGPRAAVCRVNGDIDTDEVIFWVDLIQKQLQRAIDREKI-WSKLTTSESIEVLERD 381

Query: 354 LATLGLFAYLGRRTRIFLSAMGIKDLDEMVKDFLSYLECGILFIYPEFSSIPVYQLFMEV 413
           LA  G F  LGR T+  L+A G   L+  ++D + +L  G +  YP+ S+I  YQL++EV
Sbjct: 382 LAIFGFFIALGRSTQSILAANGFDSLENPLEDLVRHLIGGSVLYYPQLSAISSYQLYVEV 441

Query: 414 VIDEIGWLDFYASYAQINCKEKGPKYHACHAEK-------EIISSVVFTVCYDVFSGFAH 466
           V +E+ W+ FY +    N   + P     H  K       E+I  ++  VC      F  
Sbjct: 442 VCEELEWIPFYPN----NTGTQPPNQSHGHKTKPEGPPNYEVIPQLL-DVCSYWLQSFIK 496

Query: 467 FDRSTQQSLDIASLSYLLRCQGLLSIC 493
           + +  +   ++ +  +L +    L  C
Sbjct: 497 YSKWPENPSNVKAAKFLSKGHKTLVRC 523


>AT5G06220.2 | Symbols:  | LETM1-like protein | chr5:1880049-1885366
           FORWARD LENGTH=909
          Length = 909

 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 152/346 (43%), Gaps = 37/346 (10%)

Query: 110 LHESARSFSQA-AESIGLARSGRGLAMAWIGKDVRVWHRRIAYQVAVYALLKTAIELEIL 168
           LH++AR+F  A  E I  +R     + AW+G D   W +  +YQ +VY LL+ A E+   
Sbjct: 122 LHDAARTFELALKEKISSSRLP-WFSAAWLGVDRNAWVKTFSYQASVYCLLQAANEVSSR 180

Query: 169 LSQERQNESSPVRNILTPLINQMGERIESQLKMKHPYLVQWFRDTKMPRMTGYFIPLLKQ 228
            +    + +  V+  L+     +   +  +L   HP   +WF   ++P     F+    +
Sbjct: 181 GNNRDDDLNVFVQRSLSRQAAPLDSMMRDKLSSSHPEANEWFWSGQVPSAVTSFVNCF-E 239

Query: 229 WSMEYXXXXXXXXXXXXT----------------CCSAVVKLGSSRICCSKLVSSLEDVL 272
               +            T                C +AV KLG +++ C    S + D  
Sbjct: 240 GDQRFVSATSVYVKSNSTAASNEIEVSLLMLVLNCIAAVTKLGPTKLSCPPFFSVIPDTT 299

Query: 273 VKLMDFSLNLATLDKLHQLATGAGFELNFLSHFGGK-----VLPSEKTEDLEFWIGLAHM 327
            +LMD  +    L + +      G    FL HFG +     V     T+++ FW+ L   
Sbjct: 300 GRLMDKFVGFVPLPQTYHSMKTLGLRREFLLHFGPRAAACRVKSDCDTDEVVFWVDLIQN 359

Query: 328 KLFKAFSKKSITLSKQNFLHKIHSES-------LATLGLFAYLGRRTRIFLSAMGIKDLD 380
           +L +A  ++ I      +   I SES       LA  G F  LG+ T+ FL+A G   L+
Sbjct: 360 QLLRAIDREKI------WSRLITSESIEVLDRDLAIFGFFIALGKSTQSFLAANGFSSLE 413

Query: 381 EMVKDFLSYLECGILFIYPEFSSIPVYQLFMEVVIDEIGWLDFYAS 426
             V+D + +   G L  YP+ S+I  YQL++EVV +E+ W+ FY +
Sbjct: 414 NPVEDLVRHFIGGSLLQYPQLSAISSYQLYVEVVCEELDWIPFYPA 459


>AT3G11560.4 | Symbols:  | LETM1-like protein | chr3:3639553-3645506
           FORWARD LENGTH=872
          Length = 872

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 192/444 (43%), Gaps = 45/444 (10%)

Query: 83  NEEEEITNVTSSSQGMEFNRVDCVVWVLHESARSFSQAAESIGLARSGRGLAMAWIGKDV 142
           N E+  T+ T S Q  + N  + +   LH++ARS   A +              W+G D 
Sbjct: 92  NLEDMRTSFTGSLQ--DENNSNGLNQSLHDAARSIELAVKEKITPSRFSWFPSTWLGADK 149

Query: 143 RVWHRRIAYQVAVYALLKTAIELEILLSQERQNESSPVRNILT----PLINQMGERIESQ 198
             W + ++YQ ++Y+LL+   E+    +   ++ +  V+  L+    PL N M E + S 
Sbjct: 150 YAWVKTLSYQASLYSLLQAVNEISSRGNYRDEDINVFVQRSLSRQAAPLENMMRENLSS- 208

Query: 199 LKMKHPYLVQWFRDTKMPRMTGYFIPLLK---------------QWSMEYXXXXXXXXXX 243
              KHP   +WF   ++P +   F+  L+               + +             
Sbjct: 209 ---KHPKAYEWFWSEQVPSVVTSFVNYLEGDQRFVAATSVYAKGKSAAASNEIEVSLLML 265

Query: 244 XXTCCSAVVKLGSSRICCSKLVSSLEDVLVKLMDFSLNLATLDKLHQLATGAGFELNFLS 303
              C +A+ K+G ++  C    S + D   +LM+  ++   L + +      G +  FL+
Sbjct: 266 VLNCIAAITKVGPAKFSCPPFFSMIPDTTGRLMEKLVDFVPLPQAYHSIKSIGLQREFLT 325

Query: 304 HFGGK-----VLPSEKTEDLEFWIGLAHMKLFKAFSKKSI--TLSKQNFLHKIHSESLAT 356
           HFG +     V     T+++ FW+ L   +L +A  ++ I   L+    +  +  + LA 
Sbjct: 326 HFGPRAAVCRVNGDIDTDEVIFWVDLIQKQLQRAIDREKIWSKLTTSESIEVLERD-LAI 384

Query: 357 LGLFAYLGRRTRIFLSAMGIKDLDEMVKDFLSYLECGILFIYPEFSSIPVYQLFMEVVID 416
            G F  LGR T+  L+A G   L+  ++D + +L  G +  YP+ S+I  YQL++EVV +
Sbjct: 385 FGFFIALGRSTQSILAANGFDSLENPLEDLVRHLIGGSVLYYPQLSAISSYQLYVEVVCE 444

Query: 417 EIGWLDFYASYAQINCKEKGPKYHACHAEK-------EIISSVVFTVCYDVFSGFAHFDR 469
           E+ W+ FY +    N   + P     H  K       E+I  ++  VC      F  + +
Sbjct: 445 ELEWIPFYPN----NTGTQPPNQSHGHKTKPEGPPNYEVIPQLL-DVCSYWLQSFIKYSK 499

Query: 470 STQQSLDIASLSYLLRCQGLLSIC 493
             +   ++ +  +L +    L  C
Sbjct: 500 WPENPSNVKAAKFLSKGHKTLVRC 523


>AT3G11560.3 | Symbols:  | LETM1-like protein | chr3:3639553-3645506
           FORWARD LENGTH=872
          Length = 872

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 192/444 (43%), Gaps = 45/444 (10%)

Query: 83  NEEEEITNVTSSSQGMEFNRVDCVVWVLHESARSFSQAAESIGLARSGRGLAMAWIGKDV 142
           N E+  T+ T S Q  + N  + +   LH++ARS   A +              W+G D 
Sbjct: 92  NLEDMRTSFTGSLQ--DENNSNGLNQSLHDAARSIELAVKEKITPSRFSWFPSTWLGADK 149

Query: 143 RVWHRRIAYQVAVYALLKTAIELEILLSQERQNESSPVRNILT----PLINQMGERIESQ 198
             W + ++YQ ++Y+LL+   E+    +   ++ +  V+  L+    PL N M E + S 
Sbjct: 150 YAWVKTLSYQASLYSLLQAVNEISSRGNYRDEDINVFVQRSLSRQAAPLENMMRENLSS- 208

Query: 199 LKMKHPYLVQWFRDTKMPRMTGYFIPLLK---------------QWSMEYXXXXXXXXXX 243
              KHP   +WF   ++P +   F+  L+               + +             
Sbjct: 209 ---KHPKAYEWFWSEQVPSVVTSFVNYLEGDQRFVAATSVYAKGKSAAASNEIEVSLLML 265

Query: 244 XXTCCSAVVKLGSSRICCSKLVSSLEDVLVKLMDFSLNLATLDKLHQLATGAGFELNFLS 303
              C +A+ K+G ++  C    S + D   +LM+  ++   L + +      G +  FL+
Sbjct: 266 VLNCIAAITKVGPAKFSCPPFFSMIPDTTGRLMEKLVDFVPLPQAYHSIKSIGLQREFLT 325

Query: 304 HFGGK-----VLPSEKTEDLEFWIGLAHMKLFKAFSKKSI--TLSKQNFLHKIHSESLAT 356
           HFG +     V     T+++ FW+ L   +L +A  ++ I   L+    +  +  + LA 
Sbjct: 326 HFGPRAAVCRVNGDIDTDEVIFWVDLIQKQLQRAIDREKIWSKLTTSESIEVLERD-LAI 384

Query: 357 LGLFAYLGRRTRIFLSAMGIKDLDEMVKDFLSYLECGILFIYPEFSSIPVYQLFMEVVID 416
            G F  LGR T+  L+A G   L+  ++D + +L  G +  YP+ S+I  YQL++EVV +
Sbjct: 385 FGFFIALGRSTQSILAANGFDSLENPLEDLVRHLIGGSVLYYPQLSAISSYQLYVEVVCE 444

Query: 417 EIGWLDFYASYAQINCKEKGPKYHACHAEK-------EIISSVVFTVCYDVFSGFAHFDR 469
           E+ W+ FY +    N   + P     H  K       E+I  ++  VC      F  + +
Sbjct: 445 ELEWIPFYPN----NTGTQPPNQSHGHKTKPEGPPNYEVIPQLL-DVCSYWLQSFIKYSK 499

Query: 470 STQQSLDIASLSYLLRCQGLLSIC 493
             +   ++ +  +L +    L  C
Sbjct: 500 WPENPSNVKAAKFLSKGHKTLVRC 523


>AT3G11560.2 | Symbols:  | LETM1-like protein | chr3:3639553-3645506
           FORWARD LENGTH=872
          Length = 872

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 192/444 (43%), Gaps = 45/444 (10%)

Query: 83  NEEEEITNVTSSSQGMEFNRVDCVVWVLHESARSFSQAAESIGLARSGRGLAMAWIGKDV 142
           N E+  T+ T S Q  + N  + +   LH++ARS   A +              W+G D 
Sbjct: 92  NLEDMRTSFTGSLQ--DENNSNGLNQSLHDAARSIELAVKEKITPSRFSWFPSTWLGADK 149

Query: 143 RVWHRRIAYQVAVYALLKTAIELEILLSQERQNESSPVRNILT----PLINQMGERIESQ 198
             W + ++YQ ++Y+LL+   E+    +   ++ +  V+  L+    PL N M E + S 
Sbjct: 150 YAWVKTLSYQASLYSLLQAVNEISSRGNYRDEDINVFVQRSLSRQAAPLENMMRENLSS- 208

Query: 199 LKMKHPYLVQWFRDTKMPRMTGYFIPLLK---------------QWSMEYXXXXXXXXXX 243
              KHP   +WF   ++P +   F+  L+               + +             
Sbjct: 209 ---KHPKAYEWFWSEQVPSVVTSFVNYLEGDQRFVAATSVYAKGKSAAASNEIEVSLLML 265

Query: 244 XXTCCSAVVKLGSSRICCSKLVSSLEDVLVKLMDFSLNLATLDKLHQLATGAGFELNFLS 303
              C +A+ K+G ++  C    S + D   +LM+  ++   L + +      G +  FL+
Sbjct: 266 VLNCIAAITKVGPAKFSCPPFFSMIPDTTGRLMEKLVDFVPLPQAYHSIKSIGLQREFLT 325

Query: 304 HFGGK-----VLPSEKTEDLEFWIGLAHMKLFKAFSKKSI--TLSKQNFLHKIHSESLAT 356
           HFG +     V     T+++ FW+ L   +L +A  ++ I   L+    +  +  + LA 
Sbjct: 326 HFGPRAAVCRVNGDIDTDEVIFWVDLIQKQLQRAIDREKIWSKLTTSESIEVLERD-LAI 384

Query: 357 LGLFAYLGRRTRIFLSAMGIKDLDEMVKDFLSYLECGILFIYPEFSSIPVYQLFMEVVID 416
            G F  LGR T+  L+A G   L+  ++D + +L  G +  YP+ S+I  YQL++EVV +
Sbjct: 385 FGFFIALGRSTQSILAANGFDSLENPLEDLVRHLIGGSVLYYPQLSAISSYQLYVEVVCE 444

Query: 417 EIGWLDFYASYAQINCKEKGPKYHACHAEK-------EIISSVVFTVCYDVFSGFAHFDR 469
           E+ W+ FY +    N   + P     H  K       E+I  ++  VC      F  + +
Sbjct: 445 ELEWIPFYPN----NTGTQPPNQSHGHKTKPEGPPNYEVIPQLL-DVCSYWLQSFIKYSK 499

Query: 470 STQQSLDIASLSYLLRCQGLLSIC 493
             +   ++ +  +L +    L  C
Sbjct: 500 WPENPSNVKAAKFLSKGHKTLVRC 523


>AT5G06220.1 | Symbols:  | LETM1-like protein | chr5:1880049-1885366
           FORWARD LENGTH=832
          Length = 832

 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 146/344 (42%), Gaps = 37/344 (10%)

Query: 106 VVWVLHESARSFSQA-AESIGLARSGRGLAMAWIGKDVRVWHRRIAYQVAVYALLKTAIE 164
           ++  LH++AR+F  A  E I  +R     + AW+G D   W +  +YQ +VY LL+ A E
Sbjct: 118 LIQSLHDAARTFELALKEKISSSRLP-WFSAAWLGVDRNAWVKTFSYQASVYCLLQAANE 176

Query: 165 LEILLSQERQNESSPVRNILTPLINQMGERIESQLKMKHPYLVQWFRDTKMPRMTGYFIP 224
           +    +    + +  V+  L+     +   +  +L   HP   +WF   ++P     F+ 
Sbjct: 177 VSSRGNNRDDDLNVFVQRSLSRQAAPLDSMMRDKLSSSHPEANEWFWSGQVPSAVTSFVN 236

Query: 225 LLKQWSMEYXXXXXXXXXXXXT----------------CCSAVVKLGSSRICCSKLVSSL 268
              +    +            T                C +AV KLG +++ C    S +
Sbjct: 237 CF-EGDQRFVSATSVYVKSNSTAASNEIEVSLLMLVLNCIAAVTKLGPTKLSCPPFFSVI 295

Query: 269 EDVLVKLMDFSLNLATLDKLHQLATGAGFELNFLSHFGGK-----VLPSEKTEDLEFWIG 323
            D   +LMD  +    L + +      G    FL HFG +     V     T+++ FW+ 
Sbjct: 296 PDTTGRLMDKFVGFVPLPQTYHSMKTLGLRREFLLHFGPRAAACRVKSDCDTDEVVFWVD 355

Query: 324 LAHMKLFKAFSKKSITLSKQNFLHKIHSES-------LATLGLFAYLGRRTRIFLSAMGI 376
           L   +L +A  ++ I      +   I SES       LA  G F  LG+ T+ FL+A G 
Sbjct: 356 LIQNQLLRAIDREKI------WSRLITSESIEVLDRDLAIFGFFIALGKSTQSFLAANGF 409

Query: 377 KDLDEMVKDFLSYLECGILFIYPEFSSIPVYQLFMEVVIDEIGW 420
             L+  V+D + +   G L  YP+ S+I  YQL++E  I    W
Sbjct: 410 SSLENPVEDLVRHFIGGSLLQYPQLSAISSYQLYVESFIKYSKW 453